Sed0008108 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAAAATTGAAGGGCAGTTTGGTAAACCAGGGCTTATTAAAGCTCCTAGAAATCCCAAACGAAACAGCCCTGCAAAACGCACTTCGCCAATTGCCATCATTCTCTCTGCAACGTTCACCGGAAAAGAAACAAAAAATGTCAGCGGAGACGGCGAAAAGCAACAAGATCCGGCGCATTGTTCGGCTCCGTCAACTGCTACAACTCTGGCGCAAGAAGGCACACCCATCGTCCTTCCGAGCACCGCCGTCCGACGTCCCCGCCGGCCACATCGCCGTCTGCGTCGGCAGCGGCTGCCGGCGATTCATCGTCCGCGCAACCTTCCTCAACCATCCGATCTTCCGGAAGCTGCTCTCGCAGGCCGAGGAGGAGTACGGCTTCGCTACGCCAGGTCCTCTCGCGCTTCCATGCGACGAATCCGTCTTCGAAGAGGTTCTCCGAGTCATCGCCCGCTCCGATTTGAATAACTCGTCTCGAAATCCGGAGTTTCAGAGGCGATGCGATGAAGATTTCAGACTGAACCTGGAGGTTTTAGGCGAATCGAGACCTCTGCTGTATGGAATCGCCGATTCTAAATCCGTTTGTTGAGTCGCTCCGAGTTTCCGCCGAGTCGACTCGGAATCTCCGAGTCTAGTTCCGGTGAGTCGATGGACTTCTTTTTTTCTTTTGTGTGCTAATTTTCGGATTATACTAAAGCTATTGGTCCTCCTCTGGTCAGATTTGGCCGGAGAGACGGCCGGGCGGCCATTATTAACGGTTGATTTAGCAAGTATTTTGGCATGGATTCGGAGGTTTTTCTCAGTAGCCTGTAAATTCCATAATTAGACCTCCATTCAGTTTTCTCATGTAGGAAGAAATTGCAGACTAAATTATGCATATACTCAGTTGTTCTGTACTGCAGTTTTGATCTAATATTCGTTTTACTGTTTATTGATTAAGTAGTTCAAATTTCAAGTGA ATGTTAAAATTGAAGGGCAGTTTGGTAAACCAGGGCTTATTAAAGCTCCTAGAAATCCCAAACGAAACAGCCCTGCAAAACGCACTTCGCCAATTGCCATCATTCTCTCTGCAACGTTCACCGGAAAAGAAACAAAAAATGTCAGCGGAGACGGCGAAAAGCAACAAGATCCGGCGCATTGTTCGGCTCCGTCAACTGCTACAACTCTGGCGCAAGAAGGCACACCCATCGTCCTTCCGAGCACCGCCGTCCGACGTCCCCGCCGGCCACATCGCCGTCTGCGTCGGCAGCGGCTGCCGGCGATTCATCGTCCGCGCAACCTTCCTCAACCATCCGATCTTCCGGAAGCTGCTCTCGCAGGCCGAGGAGGAGTACGGCTTCGCTACGCCAGGTCCTCTCGCGCTTCCATGCGACGAATCCGTCTTCGAAGAGGTTCTCCGAGTCATCGCCCGCTCCGATTTGAATAACTCGTCTCGAAATCCGGAGTTTCAGAGGCGATGCGATGAAGATTTCAGACTGAACCTGGAGGTTTTAGGCGAATCGAGACCTCTGCTGTATGGAATCGCCGATTCTAAATCCGTTTGTTGAGTCGCTCCGAGTTTCCGCCGAGTCGACTCGGAATCTCCGAGTCTAGTTCCGGTGAGTCGATGGACTTCTTTTTTTCTTTTGTGTGCTAATTTTCGGATTATACTAAAGCTATTGGTCCTCCTCTGGTCAGATTTGGCCGGAGAGACGGCCGGGCGGCCATTATTAACGGTTGATTTAGCAAGTATTTTGGCATGGATTCGGAGGTTTTTCTCAGTAGCCTGTAAATTCCATAATTAGACCTCCATTCAGTTTTCTCATGTAGGAAGAAATTGCAGACTAAATTATGCATATACTCAGTTGTTCTGTACTGCAGTTTTGATCTAATATTCGTTTTACTGTTTATTGATTAAGTAGTTCAAATTTCAAGTGA ATGTTAAAATTGAAGGGCAGTTTGGTAAACCAGGGCTTATTAAAGCTCCTAGAAATCCCAAACGAAACAGCCCTGCAAAACGCACTTCGCCAATTGCCATCATTCTCTCTGCAACGTTCACCGGAAAAGAAACAAAAAATGTCAGCGGAGACGGCGAAAAGCAACAAGATCCGGCGCATTGTTCGGCTCCGTCAACTGCTACAACTCTGGCGCAAGAAGGCACACCCATCGTCCTTCCGAGCACCGCCGTCCGACGTCCCCGCCGGCCACATCGCCGTCTGCGTCGGCAGCGGCTGCCGGCGATTCATCGTCCGCGCAACCTTCCTCAACCATCCGATCTTCCGGAAGCTGCTCTCGCAGGCCGAGGAGGAGTACGGCTTCGCTACGCCAGGTCCTCTCGCGCTTCCATGCGACGAATCCGTCTTCGAAGAGGTTCTCCGAGTCATCGCCCGCTCCGATTTGAATAACTCGTCTCGAAATCCGGAGTTTCAGAGGCGATGCGATGAAGATTTCAGACTGAACCTGGAGGTTTTAGGCGAATCGAGACCTCTGCTGTATGGAATCGCCGATTCTAAATCCGTTTGTTGA MLKLKGSLVNQGLLKLLEIPNETALQNALRQLPSFSLQRSPEKKQKMSAETAKSNKIRRIVRLRQLLQLWRKKAHPSSFRAPPSDVPAGHIAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFATPGPLALPCDESVFEEVLRVIARSDLNNSSRNPEFQRRCDEDFRLNLEVLGESRPLLYGIADSKSVC Homology
BLAST of Sed0008108 vs. NCBI nr
Match: XP_008457620.1 (PREDICTED: auxin-responsive protein SAUR64 [Cucumis melo]) HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63 Identity = 141/204 (69.12%), Postives = 161/204 (78.92%), Query Frame = 0
BLAST of Sed0008108 vs. NCBI nr
Match: XP_038902037.1 (auxin-responsive protein SAUR71-like [Benincasa hispida]) HSP 1 Score: 251.5 bits (641), Expect = 5.8e-63 Identity = 124/153 (81.05%), Postives = 138/153 (90.20%), Query Frame = 0
BLAST of Sed0008108 vs. NCBI nr
Match: KAG6605036.1 (Auxin-responsive protein SAUR41, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.4 bits (612), Expect = 1.3e-59 Identity = 121/152 (79.61%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of Sed0008108 vs. NCBI nr
Match: XP_023006979.1 (auxin-responsive protein SAUR71-like [Cucurbita maxima]) HSP 1 Score: 240.0 bits (611), Expect = 1.8e-59 Identity = 120/152 (78.95%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of Sed0008108 vs. NCBI nr
Match: KAG7035051.1 (Auxin-responsive protein SAUR41, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 240.0 bits (611), Expect = 1.8e-59 Identity = 121/152 (79.61%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 6.4e-12 Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11 Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11 Identity = 42/113 (37.17%), Postives = 58/113 (51.33%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 7.0e-11 Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.2e-11 Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy TrEMBL
Match: A0A1S3C5H3 (auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=3 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 7.4e-64 Identity = 141/204 (69.12%), Postives = 161/204 (78.92%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy TrEMBL
Match: A0A6J1L3P0 (auxin-responsive protein SAUR71-like OS=Cucurbita maxima OX=3661 GN=LOC111499611 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 8.5e-60 Identity = 120/152 (78.95%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy TrEMBL
Match: A0A6J1G6T1 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111451389 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 4.2e-59 Identity = 120/152 (78.95%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy TrEMBL
Match: A0A0A0LM48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=3 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 9.4e-59 Identity = 130/195 (66.67%), Postives = 149/195 (76.41%), Query Frame = 0
BLAST of Sed0008108 vs. ExPASy TrEMBL
Match: A0A6J1JBR0 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111484316 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58 Identity = 118/148 (79.73%), Postives = 129/148 (87.16%), Query Frame = 0
BLAST of Sed0008108 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42 Identity = 85/149 (57.05%), Postives = 112/149 (75.17%), Query Frame = 0
BLAST of Sed0008108 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 159.5 bits (402), Expect = 2.8e-39 Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = 0
BLAST of Sed0008108 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 149.1 bits (375), Expect = 3.8e-36 Identity = 83/151 (54.97%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of Sed0008108 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 149.1 bits (375), Expect = 3.8e-36 Identity = 83/151 (54.97%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of Sed0008108 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35 Identity = 75/145 (51.72%), Postives = 101/145 (69.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|