CmUC03G062330 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G062330
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein LATERAL ROOT PRIMORDIUM 1
Location	CmU531Chr03: 24723754 .. 24727225 (-)
RNA-Seq Expression	CmUC03G062330
Synteny	CmUC03G062330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCAATTTCTAAGCCGGTATGGAGACCAGGTTCAAGATGCATATCAACACAGATTATAGGTTGTTCAACGAACAACCAAAGCACACTCTCATACAGTGAGATATACACATCACTTTCACAGAAACTCATCAACAATCGTTCATCAAGTGGCTACCCTAAAGCTTCAAGGACACCCAATTGTATAACCATTGCTTTAGGAAAGTAATAAAATACAAATCGAGATCATCCAACAACTAAAGAAGGAAAAGAATCCAAAAAATAAAGCAGCAAAGACTAAATGAAAAAGAAAAATATTCTAGACGGATTATGCACAAGGTGTGGAACGTCATACGTGCCAAAATAGAAGACAAACTATAAAACAAAAACTCTACCATCTTTGCCTATAAGAAAAATAAAACCAAAACCAAAACAAGTATGCTTTCAAAATTTATGGTAAAAATACTAACAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTAAAGAAATAACGATAAATTAGCGATGTGAATAAATTTAAGATTTATTAAAAATATGAAAACTAAATTGATAAAATAAAAGTATAGTAAGTAAAATAGTGTTTAAAATAAATATATTTAATTTCATGGTGTATAAATTAGTACAATTGTGTACCAGTGAGATTGAGACAAGATTTTTAGAGAGACAAAGAAAAAGGTAAAAAAAGAATAGAAAAAAGAAAAAGTTGGCGATGGCATTAATGGCTGCAGATACTGTGAAAACTACAAAAGCACTTTTTAGTGTTTCTTTAATCCATTGACAACCAAAACATCCTTCTCTCAATTCTCATTTCTCAATCCCAATTCTCTCTAAATTATCAACAAAAAAAAAAGAAAAAAAAAGAAAAAATCATAGATCCATGTTGCTTCATCAGTAAATCTCAGATCCAATTTAGATTTGTTTTTTTGTAGAAAAGGAAAATTAATTTAGGGTTTTTCTTCTTCTTCGCCGGAGATTTACCAGCTGTGGCTGCCGCACGCCGTCTTCCATCCGATTCCGGTGCCTTTGCCGACTGGGTGGCTCCTCCCTCTGCCATAGTCGCCGATGAACTCTCCCTCGGTTTCAATTCCGCAGCCACCGTTCCACCGGCCAGGATGTGGCCCTCGTCCAGACCACTTGCCGTCGGTTACGGCCACACCGCGGCGCCAGCGCCAGACATGGTGGGTCTCATGGCTTCGGGCTTTGGAGTCGGCGTTAGCGTTTTGCCTCTCCTTACCGGCCTTGCGCCGTCGAGTGTAGGAATTGAAGAGGCTAATTTAATGATCAGCCGTGGCAGCAGCAGCGGTGGGGTTCAATTCAACGGGAATAATTTGGATGGGTTTGGGATTTTGGGAGGTGGGTCGTCGAGTTTGAATTCCGGCGCTGGAACTTGCCATGACTGTGGGAACCAAGCAAAGAAAGATTGCAGCCACCGGCGGTGCCGGAGCTGCTGTAAAAGTCGTGGATTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTTCCGGCAGCTCGGCGAAGAGAACGTCAGATGCTGGGCGGCGCGTCAGAAGCGGCCGCCGGGGGAACTTCATCTGGGTCAACCTCCGGCGGGAAGAAGCCGAGACTCATTGCTTCACAGACGACTACCAATTCCCATACTTCCACTTCCAACACTCCAACACCAAGCTTCGACGCTTCCTCAGGTCAAATTCCTCTCAGTATTTTTTTTTTTTTAAAAAAAAAAAAAATTAAATTTACTATTTCATTTTTTCAAAAAAAAAAAAAAAAAAAAATGTATTTTAAGGTGCACCGATCTTTTTGTTCTTCCTCCCACCACATAATTGAAAATTTTTAAAAATATTTTAAGAAAAAGAGAAAAGAAGTATTTGTCATGTAATTAAAGTGGATAAGCTGCAAATGAACAAAACTCATACTTTTTTTTTTTTTTTTTAATTTTATTTTATATATATACACACACATATACACACATTTTGATTTTTGATTTTTGATTCTCCATTTAACAATAATTTTTGGTTTCTGAATTTTGAAAGTTGGAGTTTTTGTAATTTTTTTTTCATATTTCTTAAAAAACTCATCTACGAAGCTAAATTGTCTGAAAAAAAAAACTAATTCTTTAGTTTCCAGAAGTTTGTTCAAAATTTCTATAAAATGGATAATAAAATATGAAAATTCTGATGTGAAATAGTGTTTATAAGTTTAAAATTTAAATAGTAATTATCAAATAAAGTCTAAATTTTAAATGATTGTTTTGATGTGAAATAGTGTTTATAAGTTTAAAATTTAAATAATAATTATCAAATGAAGTCTAAATTTTAAATGATTGATTTGTATTCGACTTTGATATTACAAAAAGAAAAAGATGCACACTCATATTTTGGTACTTCATCATTTTTTTCAACAAATGAATGACATATTTTGAATGTTTAAAAGATTTGCCAAGTGAAGCATGTGATGAGTATTATTAAGAGGGAAAATAATTATAACACAAAAACAATCTAATTAGTTATTATTATTTATTTTTCAAAATTTAAAATCTAAAACCATATATATCTATATATTTTTTTTAACTATATATAATGAAAAGAAATGAGTTTTTATTTTATTTTTTTAATTTTAATATTGCTTGAATTAGATCTATGAACTTTTAAGGCTTCGTGTAATAATAAGCCTTCCAATTTTAAAAATTCTACTAAATTTTTAGATTTGATGTTTAATAAAATTTTAAATATATTTTAAAACATAGTAAAAATTAATAATTAAAGAAAAAAAAAGAAAAAAGAAAAAAAAAACCTAAACATTCATAAAATTTGGTGACTTTATTACACAAAATAATAAAGAAGATTTTAGACAACCAAACTTATAATCAAATCTTGATTCTTTGAATTTATCCCAAAGAATGTGATGGAACTTTTTTGAGTTGTTTTGTGTTAACTTTAAGCAACACAATGCAGCCGCCGATATGAGTTCTAAAAAGGCAAAGAAGCTGCCAGAACAAATCAGAGCGCCGGCGGTGTTCAAGTGCGTCCGGGTGACGGCGGTGGAAGGCGGCAGCGGCGGAGGAGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCATATTTTTAAAGGTTATTTATACGACCATGGAGTAGAAGCTGCTAGAGATGGGTTTCCAACGTTGTCCAATTTGCATCTTGGAGATGGCGGTTCGGCATCGTCGCCGGTCATTGATCCTGCTGACGTTTATGGAAGCTCCGCCGCTCGCGGCGGGGGACTGGCTGGGGGTTCTGGCTATGGTAATCCCATAAATTGATCCATATTATTTAAACATTTTCAATGATGGGTTATAGCTTTTGAATTTAATTAGTGGAAAAATAAGAGATAGGAGCCTCTATTTATGGTGTATTTTATTGCTTACAAATATAAATATATTCTATTAATATTTAA

mRNA sequence

ATGGGCCAATTTCTAAGCCGGTATGGAGACCAGAAAAGGAAAATTAATTTAGGGTTTTTCTTCTTCTTCGCCGGAGATTTACCAGCTGTGGCTGCCGCACGCCGTCTTCCATCCGATTCCGGTGCCTTTGCCGACTGGGTGGCTCCTCCCTCTGCCATAGTCGCCGATGAACTCTCCCTCGGTTTCAATTCCGCAGCCACCGTTCCACCGGCCAGGATGTGGCCCTCGTCCAGACCACTTGCCGTCGGTTACGGCCACACCGCGGCGCCAGCGCCAGACATGGTGGGTCTCATGGCTTCGGGCTTTGGAGTCGGCGTTAGCGTTTTGCCTCTCCTTACCGGCCTTGCGCCGTCGAGTGTAGGAATTGAAGAGGCTAATTTAATGATCAGCCGTGGCAGCAGCAGCGGTGGGGTTCAATTCAACGGGAATAATTTGGATGGGTTTGGGATTTTGGGAGGTGGGTCGTCGAGTTTGAATTCCGGCGCTGGAACTTGCCATGACTGTGGGAACCAAGCAAAGAAAGATTGCAGCCACCGGCGGTGCCGGAGCTGCTGTAAAAGTCGTGGATTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTTCCGGCAGCTCGGCGAAGAGAACGTCAGATGCTGGGCGGCGCGTCAGAAGCGGCCGCCGGGGGAACTTCATCTGGGTCAACCTCCGGCGGGAAGAAGCCGAGACTCATTGCTTCACAGACGACTACCAATTCCCATACTTCCACTTCCAACACTCCAACACCAAGCTTCGACGCTTCCTCAGGTCAAATTCCTCTCACCGCCGATATGAGTTCTAAAAAGGCAAAGAAGCTGCCAGAACAAATCAGAGCGCCGGCGGTGTTCAAGTGCGTCCGGGTGACGGCGGTGGAAGGCGGCAGCGGCGGAGGAGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCATATTTTTAAAGGTTATTTATACGACCATGGAGTAGAAGCTGCTAGAGATGGGTTTCCAACGTTGTCCAATTTGCATCTTGGAGATGGCGGTTCGGCATCGTCGCCGGTCATTGATCCTGCTGACGTTTATGGAAGCTCCGCCGCTCGCGGCGGGGGACTGGCTGGGGGTTCTGGCTATGGTAATCCCATAAATTGATCCATATTATTTAAACATTTTCAATGATGGGTTATAGCTTTTGAATTTAATTAGTGGAAAAATAAGAGATAGGAGCCTCTATTTATGGTGTATTTTATTGCTTACAAATATAAATATATTCTATTAATATTTAA

Coding sequence (CDS)

ATGGGCCAATTTCTAAGCCGGTATGGAGACCAGAAAAGGAAAATTAATTTAGGGTTTTTCTTCTTCTTCGCCGGAGATTTACCAGCTGTGGCTGCCGCACGCCGTCTTCCATCCGATTCCGGTGCCTTTGCCGACTGGGTGGCTCCTCCCTCTGCCATAGTCGCCGATGAACTCTCCCTCGGTTTCAATTCCGCAGCCACCGTTCCACCGGCCAGGATGTGGCCCTCGTCCAGACCACTTGCCGTCGGTTACGGCCACACCGCGGCGCCAGCGCCAGACATGGTGGGTCTCATGGCTTCGGGCTTTGGAGTCGGCGTTAGCGTTTTGCCTCTCCTTACCGGCCTTGCGCCGTCGAGTGTAGGAATTGAAGAGGCTAATTTAATGATCAGCCGTGGCAGCAGCAGCGGTGGGGTTCAATTCAACGGGAATAATTTGGATGGGTTTGGGATTTTGGGAGGTGGGTCGTCGAGTTTGAATTCCGGCGCTGGAACTTGCCATGACTGTGGGAACCAAGCAAAGAAAGATTGCAGCCACCGGCGGTGCCGGAGCTGCTGTAAAAGTCGTGGATTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTTCCGGCAGCTCGGCGAAGAGAACGTCAGATGCTGGGCGGCGCGTCAGAAGCGGCCGCCGGGGGAACTTCATCTGGGTCAACCTCCGGCGGGAAGAAGCCGAGACTCATTGCTTCACAGACGACTACCAATTCCCATACTTCCACTTCCAACACTCCAACACCAAGCTTCGACGCTTCCTCAGGTCAAATTCCTCTCACCGCCGATATGAGTTCTAAAAAGGCAAAGAAGCTGCCAGAACAAATCAGAGCGCCGGCGGTGTTCAAGTGCGTCCGGGTGACGGCGGTGGAAGGCGGCAGCGGCGGAGGAGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCATATTTTTAAAGGTTATTTATACGACCATGGAGTAGAAGCTGCTAGAGATGGGTTTCCAACGTTGTCCAATTTGCATCTTGGAGATGGCGGTTCGGCATCGTCGCCGGTCATTGATCCTGCTGACGTTTATGGAAGCTCCGCCGCTCGCGGCGGGGGACTGGCTGGGGGTTCTGGCTATGGTAATCCCATAAATTGA

Protein sequence

MGQFLSRYGDQKRKINLGFFFFFAGDLPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSAATVPPARMWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGGLAGGSGYGNPIN

Homology

[Close]

BLAST of CmUC03G062330 vs. NCBI nr
Match: KAA0056003.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK27692.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa])

HSP 1 Score: 617.5 bits (1591), Expect = 7.9e-173
Identity = 327/369 (88.62%), Postives = 337/369 (91.33%), Query Frame = 0


Query: 18  GFFFFFAGDLPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSAATVPPARMWPSS 77
           GF F  A D PAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSA+++P  RMWPSS
Sbjct: 7   GFLFLSARDSPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSASSIPSPRMWPSS 66

Query: 78  RPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG----S 137
           RPL +GY HT AP PDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG     
Sbjct: 67  RPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDE 126

Query: 138 SSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS 197
             GG+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS
Sbjct: 127 GGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS 186

Query: 198 THVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP 257
           THVKSTWVPAARRRERQM+G AS+AAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP
Sbjct: 187 THVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP 246

Query: 258 TPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVV 317
           TPSFDASS      ADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYAYQAVV
Sbjct: 247 TPSFDASS-----AADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVV 306

Query: 318 KIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGGLAG 377
           KIGGH+FKGYLYDHGVE ARDGFPT+SNLHLGDGGS SSPVIDP+DVYGSSA RGGGLAG
Sbjct: 307 KIGGHVFKGYLYDHGVE-ARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAG 366

Query: 378 GSGYGNPIN 383
           GSGYGN IN
Sbjct: 367 GSGYGNSIN 368

[Close]

BLAST of CmUC03G062330 vs. NCBI nr
Match: KAG6588219.1 (Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 539.3 bits (1388), Expect = 2.7e-149
Identity = 300/369 (81.30%), Postives = 317/369 (85.91%), Query Frame = 0


Query: 29  AVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSAATVPPARMWPSS---RPLAVGYG 88
           +VAAARRLPSDSGAFADWVAPP+A   DELSLGFNSAA VP ARMWPSS   RP+A  YG
Sbjct: 12  SVAAARRLPSDSGAFADWVAPPTA--DDELSLGFNSAAAVPVARMWPSSSSTRPIAGAYG 71

Query: 89  HTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISR-------GSSSGGV 148
           HTA P  DMVGLMASG+GVG+SVLPLLTGLAPSSVGIEE NLMISR       G   GGV
Sbjct: 72  HTAPPPTDMVGLMASGYGVGLSVLPLLTGLAPSSVGIEETNLMISRGGGGGDGGGGGGGV 131

Query: 149 QFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKS 208
           QF+GNN DGFG LGGG SSLNSG GTCHDCGNQAKKDC+HRRCRSCCKSRGFDC+THVKS
Sbjct: 132 QFHGNNFDGFGFLGGG-SSLNSGVGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCATHVKS 191

Query: 209 TWVPAARRRERQMLGGASEAAA--GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPS 268
           TWVPAARRRERQ+L  A+ AAA  GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPT S
Sbjct: 192 TWVPAARRRERQVLSAAAAAAAATGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRS 251

Query: 269 FDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIG 328
           FD  S      ADMS K+AKKLPEQ+RAPAVFKCVRVTAVEGG G GGNEYAYQAVVKIG
Sbjct: 252 FDTCS-----AADMSYKRAKKLPEQVRAPAVFKCVRVTAVEGG-GSGGNEYAYQAVVKIG 311

Query: 329 GHIFKGYLYDHGVEAARDGFPTLSNLHL---GDGGSASSPVIDPADVYGSSAARGGGLAG 383
           GH+FKGYLYDHGVE AR+GFP LS+LHL   GDGGS SSP+IDP+DVYGSSA RGGGLAG
Sbjct: 312 GHVFKGYLYDHGVE-AREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAG 370

[Close]

BLAST of CmUC03G062330 vs. NCBI nr
Match: XP_038878596.1 (protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida])

HSP 1 Score: 535.4 bits (1378), Expect = 4.0e-148
Identity = 287/315 (91.11%), Postives = 290/315 (92.06%), Query Frame = 0


Query: 73  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISR- 132
           MWPSSRPLA+GYGHTAAP  DMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISR 
Sbjct: 1   MWPSSRPLAIGYGHTAAPPTDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 60

Query: 133 ----GSSSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKS 192
               G   GGVQFNGNNLDGFGILGGG SSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKS
Sbjct: 61  GGDGGGGGGGVQFNGNNLDGFGILGGG-SSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKS 120

Query: 193 RGFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHT 252
           RGFDCSTHVKSTWVPAARRRERQML  AS+ AAGGTSSGSTSGGKKPRLIASQTTTNSHT
Sbjct: 121 RGFDCSTHVKSTWVPAARRRERQMLSAASDVAAGGTSSGSTSGGKKPRLIASQTTTNSHT 180

Query: 253 STSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEY 312
           STSNTPTPSFDASS      ADMS KKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEY
Sbjct: 181 STSNTPTPSFDASS-----AADMSCKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEY 240

Query: 313 AYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAAR 372
           AYQA+VKIGGHIFKGYLYDHGVE ARDGFPTLSNLHLGDGGS SSPVIDPADVYGSSAAR
Sbjct: 241 AYQAIVKIGGHIFKGYLYDHGVE-ARDGFPTLSNLHLGDGGSTSSPVIDPADVYGSSAAR 300

Query: 373 GGGLAGGSGYGNPIN 383
           GG LAGGSGYGNPIN
Sbjct: 301 GGALAGGSGYGNPIN 308

[Close]

BLAST of CmUC03G062330 vs. NCBI nr
Match: XP_008450344.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 532.3 bits (1370), Expect = 3.4e-147
Identity = 282/314 (89.81%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 73  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 132
           MWPSSRPL +GY HT AP PDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG
Sbjct: 1   MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 60

Query: 133 ----SSSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSR 192
                  GG+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSR
Sbjct: 61  GGGDEGGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSR 120

Query: 193 GFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 252
           GFDCSTHVKSTWVPAARRRERQM+G AS+AAAGGTSSGSTSGGKKPRLIASQTTTNSHTS
Sbjct: 121 GFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 180

Query: 253 TSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYA 312
           TSNTPTPSFDASS      ADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYA
Sbjct: 181 TSNTPTPSFDASS-----AADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYA 240

Query: 313 YQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARG 372
           YQAVVKIGGH+FKGYLYDHGVE ARDGFPT+SNLHLGDGGS SSPVIDP+DVYGSSA RG
Sbjct: 241 YQAVVKIGGHVFKGYLYDHGVE-ARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRG 300

Query: 373 GGLAGGSGYGNPIN 383
           GGLAGGSGYGN IN
Sbjct: 301 GGLAGGSGYGNSIN 307

[Close]

BLAST of CmUC03G062330 vs. NCBI nr
Match: XP_011660164.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN66542.1 hypothetical protein Csa_007512 [Cucumis sativus])

HSP 1 Score: 526.9 bits (1356), Expect = 1.4e-145
Identity = 279/314 (88.85%), Postives = 287/314 (91.40%), Query Frame = 0


Query: 73  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 132
           MWPSSRPL +GY HT AP PDMVGLMASGFGVGVSVLPLL+GLAPSSVGIEEANLMISRG
Sbjct: 1   MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLSGLAPSSVGIEEANLMISRG 60

Query: 133 ----SSSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSR 192
                  GG+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSR
Sbjct: 61  GGGDDGGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSR 120

Query: 193 GFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 252
           GFDCSTHVKSTWVPAARRRERQM+G AS+AAAGGTSSGSTSGGKKPRLIASQTTTNSHTS
Sbjct: 121 GFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 180

Query: 253 TSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYA 312
           TSNTPTPSFDASS      ADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGG+ GGGNEYA
Sbjct: 181 TSNTPTPSFDASS-----AADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGTSGGGNEYA 240

Query: 313 YQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARG 372
           YQAVVKIGGH+FKGYLYDHGVE ARDGFP +SNLHLGDGGS SSPVIDPADVYGSS  RG
Sbjct: 241 YQAVVKIGGHVFKGYLYDHGVE-ARDGFPMMSNLHLGDGGSTSSPVIDPADVYGSSTTRG 300

Query: 373 GGLAGGSGYGNPIN 383
           GGLAGGSGYGN IN
Sbjct: 301 GGLAGGSGYGNSIN 307

[Close]

BLAST of CmUC03G062330 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.1e-55
Identity = 145/297 (48.82%), Postives = 184/297 (61.95%), Query Frame = 0


Query: 99  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSGGVQFNGNNLD------------ 158
           A+   +GV V+PLLT   P    +E+++  I+   ++   Q N NN +            
Sbjct: 35  AAAAALGVGVIPLLTAGTPQQ-NVEDSD--INFLGNNRRWQNNNNNHETQYLHFKSTNQT 94

Query: 159 --GFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAA 218
             G      GS S  SG  TC DCGNQAKK+C  RRCR+CCKSRGFDCSTHVKSTWV AA
Sbjct: 95  TVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAA 154

Query: 219 RRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDAS 278
           RRRERQ++   +   A G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF+ S
Sbjct: 155 RRRERQVMPTGANPTA-GSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETS 214

Query: 279 SGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIF 338
           S +            +  P Q+RA AVFKCVRVTAVE G     +EYAYQAVVKIGGH+F
Sbjct: 215 SSR-----QDGGGSREAWPGQVRAAAVFKCVRVTAVEDGD----DEYAYQAVVKIGGHVF 274

Query: 339 KGYLYDHGVEAARDGFPTLSNLHLG------DGGSASSPVIDPAD-VYGSSAARGGG 371
           KG+LYD G+E  ++GFP++S+LHLG      +G SAS+P++DP + VYG     GGG
Sbjct: 275 KGFLYDQGLE-PKEGFPSMSDLHLGGSANNHNGVSASAPILDPPNVVYGGGGGSGGG 317

[Close]

BLAST of CmUC03G062330 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.1e-31
Identity = 91/219 (41.55%), Postives = 120/219 (54.79%), Query Frame = 0


Query: 164 TCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRER-QMLGGASEAAAGG 223
           +C DCGNQAKKDC+H RCR+CCKSRGFDCSTHV+STW+P ARRRER Q L  ++    GG
Sbjct: 93  SCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGG 152

Query: 224 TSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQI 283
           + SG   GG            +S       PT    +SS ++P  +          P ++
Sbjct: 153 SGSGGAGGG-----------GSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEV 212

Query: 284 RAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNL 343
            + A+F+CV+++ V+    GG  +YAYQ  V IGGH+FKG LYD G        P  S +
Sbjct: 213 SSDALFRCVKMSGVD---DGGDGQYAYQTTVNIGGHLFKGILYDQG--------PESSYM 272

Query: 344 HLGDGGSASSPVIDPADVYGSSAARGGGLAGGSGYGNPI 382
             G GGS           + SS+A GGG  GG  +  P+
Sbjct: 273 SGGSGGSD----------HQSSSAGGGG--GGHPFNPPV 277

[Close]

BLAST of CmUC03G062330 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.1e-28
Identity = 87/228 (38.16%), Postives = 120/228 (52.63%), Query Frame = 0


Query: 133 SSSGGVQFNGNNLDGFGILGGGSSSLNSGAG----TCHDCGNQAKKDCSHRRCRSCCKSR 192
           +S+ G+    +N       GG    + SG+G    +C DCGNQ+KKDCSH RCR+CCKSR
Sbjct: 84  TSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSR 143

Query: 193 GFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 252
           G DC THVKSTWVPAA+RRERQ                  S G++P+ +           
Sbjct: 144 GLDCPTHVKSTWVPAAKRRERQQ---------------QLSTGQQPQQLGGSVPKRQR-- 203

Query: 253 TSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYA 312
               P  S   +  +IP + + S  +    P ++ + AVF+CVRV++V+        EYA
Sbjct: 204 -ERIPARSTSMAYTRIP-SNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEE----EEYA 263

Query: 313 YQAVVKIGGHIFKGYLYDHGV---EAARDGFPTLSNLHLGDGGSASSP 354
           Y+  V IGGH+FKG LYD G     ++  G   L+ +  G   S+SSP
Sbjct: 264 YKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSP 288

[Close]

BLAST of CmUC03G062330 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-27
Identity = 86/219 (39.27%), Postives = 114/219 (52.05%), Query Frame = 0


Query: 142 GNNLDGFGILGG-------GSSSLNSGAG--TCHDCGNQAKKDCSHRRCRSCCKSRGFDC 201
           G +  GF I  G       G   + SG G  +C DCGNQAKKDC H RCR+CCKSRGF C
Sbjct: 97  GPSRSGFDISAGDHEASRSGFVMMRSGGGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQC 156

Query: 202 STHVKSTWVPAARRRER-QMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSN 261
            THVKSTWVPAA+RRER Q L    +   G  ++ +    K+ R   S ++  S    SN
Sbjct: 157 QTHVKSTWVPAAKRRERQQQLAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSN 216

Query: 262 TPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQA 321
           T                  +  +  K P ++R  AVF+C++++++E       ++ AYQA
Sbjct: 217 T------------------NGLEVGKFPSKVRTSAVFQCIQMSSIEDDE----DQLAYQA 276

Query: 322 VVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSA 351
            V IGGH+FKG LYD G E+  +            GGSA
Sbjct: 277 AVSIGGHVFKGILYDQGHESQYNNMVAAGG-DTSSGGSA 292

[Close]

BLAST of CmUC03G062330 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.8e-27
Identity = 88/210 (41.90%), Postives = 114/210 (54.29%), Query Frame = 0


Query: 128 MISRGSSSGGVQFNGNNLDG---FGILG----GGSSSLNSGAGTCHDCGNQAKKDCSHRR 187
           M+  GSSS     N NN      F ++     GG +    G   C DCGNQAKKDC H R
Sbjct: 85  MVPSGSSSN----NNNNRSRSLYFNVVSDHEPGGFTVTRQGGMNCQDCGNQAKKDCPHMR 144

Query: 188 CRSCCKSRGFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQ 247
           CR+CCKSRGF C THVKSTWVPAA+RRER  L   +       SS  T   K  RL  + 
Sbjct: 145 CRTCCKSRGFHCQTHVKSTWVPAAKRRER--LAQLASLQHHSASSRETQNAK--RLREAS 204

Query: 248 TTTNSHTSTSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS 307
              N+     +    S  A++  +   ++   + ++ LP ++ +PA+F+CVRV+++E   
Sbjct: 205 GGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNSPAIFRCVRVSSIE--E 264

Query: 308 GGGGNEYAYQAVVKIGGHIFKGYLYDHGVE 331
                 YAYQ  V IGGHIFKG LYD G E
Sbjct: 265 DEDDQAYAYQTAVNIGGHIFKGILYDQGPE 284

[Close]

BLAST of CmUC03G062330 vs. ExPASy TrEMBL
Match: A0A5A7UJ85 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00230 PE=3 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 3.8e-173
Identity = 327/369 (88.62%), Postives = 337/369 (91.33%), Query Frame = 0


Query: 18  GFFFFFAGDLPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSAATVPPARMWPSS 77
           GF F  A D PAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSA+++P  RMWPSS
Sbjct: 7   GFLFLSARDSPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSASSIPSPRMWPSS 66

Query: 78  RPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG----S 137
           RPL +GY HT AP PDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG     
Sbjct: 67  RPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDE 126

Query: 138 SSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS 197
             GG+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS
Sbjct: 127 GGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS 186

Query: 198 THVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP 257
           THVKSTWVPAARRRERQM+G AS+AAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP
Sbjct: 187 THVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP 246

Query: 258 TPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVV 317
           TPSFDASS      ADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYAYQAVV
Sbjct: 247 TPSFDASS-----AADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVV 306

Query: 318 KIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGGLAG 377
           KIGGH+FKGYLYDHGVE ARDGFPT+SNLHLGDGGS SSPVIDP+DVYGSSA RGGGLAG
Sbjct: 307 KIGGHVFKGYLYDHGVE-ARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAG 366

Query: 378 GSGYGNPIN 383
           GSGYGN IN
Sbjct: 367 GSGYGNSIN 368

[Close]

BLAST of CmUC03G062330 vs. ExPASy TrEMBL
Match: A0A1S3BQ17 (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103491981 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.6e-147
Identity = 282/314 (89.81%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 73  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 132
           MWPSSRPL +GY HT AP PDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG
Sbjct: 1   MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 60

Query: 133 ----SSSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSR 192
                  GG+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSR
Sbjct: 61  GGGDEGGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSR 120

Query: 193 GFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 252
           GFDCSTHVKSTWVPAARRRERQM+G AS+AAAGGTSSGSTSGGKKPRLIASQTTTNSHTS
Sbjct: 121 GFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 180

Query: 253 TSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYA 312
           TSNTPTPSFDASS      ADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYA
Sbjct: 181 TSNTPTPSFDASS-----AADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYA 240

Query: 313 YQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARG 372
           YQAVVKIGGH+FKGYLYDHGVE ARDGFPT+SNLHLGDGGS SSPVIDP+DVYGSSA RG
Sbjct: 241 YQAVVKIGGHVFKGYLYDHGVE-ARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRG 300

Query: 373 GGLAGGSGYGNPIN 383
           GGLAGGSGYGN IN
Sbjct: 301 GGLAGGSGYGNSIN 307

[Close]

BLAST of CmUC03G062330 vs. ExPASy TrEMBL
Match: A0A0A0M099 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G628000 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 6.8e-146
Identity = 279/314 (88.85%), Postives = 287/314 (91.40%), Query Frame = 0


Query: 73  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 132
           MWPSSRPL +GY HT AP PDMVGLMASGFGVGVSVLPLL+GLAPSSVGIEEANLMISRG
Sbjct: 1   MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLSGLAPSSVGIEEANLMISRG 60

Query: 133 ----SSSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSR 192
                  GG+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSR
Sbjct: 61  GGGDDGGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSR 120

Query: 193 GFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 252
           GFDCSTHVKSTWVPAARRRERQM+G AS+AAAGGTSSGSTSGGKKPRLIASQTTTNSHTS
Sbjct: 121 GFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 180

Query: 253 TSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYA 312
           TSNTPTPSFDASS      ADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGG+ GGGNEYA
Sbjct: 181 TSNTPTPSFDASS-----AADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGTSGGGNEYA 240

Query: 313 YQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARG 372
           YQAVVKIGGH+FKGYLYDHGVE ARDGFP +SNLHLGDGGS SSPVIDPADVYGSS  RG
Sbjct: 241 YQAVVKIGGHVFKGYLYDHGVE-ARDGFPMMSNLHLGDGGSTSSPVIDPADVYGSSTTRG 300

Query: 373 GGLAGGSGYGNPIN 383
           GGLAGGSGYGN IN
Sbjct: 301 GGLAGGSGYGNSIN 307

[Close]

BLAST of CmUC03G062330 vs. ExPASy TrEMBL
Match: A0A6J1ID91 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472747 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 4.0e-130
Identity = 262/323 (81.11%), Postives = 278/323 (86.07%), Query Frame = 0


Query: 73  MWP---SSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMI 132
           MWP   SSRP+A  YGHTA P  DMVGLMASG+GVG+SVLPLLTG+APSSVGIEE NLMI
Sbjct: 1   MWPSSSSSRPIAGAYGHTAPPPTDMVGLMASGYGVGLSVLPLLTGIAPSSVGIEETNLMI 60

Query: 133 SR------GSSSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRS 192
           SR      G   GGVQF+GNN DGFG LGGG SSLNSG GTCHDCGNQAKKDC+HRRCRS
Sbjct: 61  SRGGGGDGGGGGGGVQFHGNNFDGFGFLGGG-SSLNSGVGTCHDCGNQAKKDCNHRRCRS 120

Query: 193 CCKSRGFDCSTHVKSTWVPAARRRERQMLGGASEAAA-GGTSSGSTSGGKKPRLIASQTT 252
           CCKSRGFDC+THVKSTWVPAARRRERQ+L  A+ AAA GGTSSGSTSGGKKPRLIASQTT
Sbjct: 121 CCKSRGFDCATHVKSTWVPAARRRERQVLSAAAAAAATGGTSSGSTSGGKKPRLIASQTT 180

Query: 253 TNSHTSTSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGG 312
           TNSHTSTSNTPT SFD  S      ADMS K+AKKLPEQ+RAPAVFKCVRVTAVEGG G 
Sbjct: 181 TNSHTSTSNTPTRSFDTCS-----AADMSYKRAKKLPEQVRAPAVFKCVRVTAVEGG-GS 240

Query: 313 GGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHL---GDGGSASSPVIDPAD 372
           GGNEYAYQAVVKIGGH+FKGYLYDHGVE AR+GFP LS+LHL   GDGGS SSP+IDP+D
Sbjct: 241 GGNEYAYQAVVKIGGHVFKGYLYDHGVE-AREGFPMLSDLHLGGGGDGGSTSSPIIDPSD 300

Query: 373 VYGSSAARGGGLAGGSGYGNPIN 383
           VYGSSA RGGGLAGGSGYGNPIN
Sbjct: 301 VYGSSAGRGGGLAGGSGYGNPIN 315

[Close]

BLAST of CmUC03G062330 vs. ExPASy TrEMBL
Match: A0A6J1IFF1 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472747 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.5e-129
Identity = 261/323 (80.80%), Postives = 277/323 (85.76%), Query Frame = 0


Query: 73  MWP---SSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMI 132
           MWP   SSRP+A  YGHTA P  DMVGLMASG+GVG+SVLPLLTG+APSSVGIEE NLMI
Sbjct: 1   MWPSSSSSRPIAGAYGHTAPPPTDMVGLMASGYGVGLSVLPLLTGIAPSSVGIEETNLMI 60

Query: 133 SR------GSSSGGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRS 192
           SR      G   GGVQF+GNN DGFG LGGG SSLNSG GTCHDCGNQAKKDC+HRRCRS
Sbjct: 61  SRGGGGDGGGGGGGVQFHGNNFDGFGFLGGG-SSLNSGVGTCHDCGNQAKKDCNHRRCRS 120

Query: 193 CCKSRGFDCSTHVKSTWVPAARRRERQMLGGASEAAA-GGTSSGSTSGGKKPRLIASQTT 252
           CCKSRGFDC+THVKSTWVPAARRRERQ+L  A+ AAA GGTSSGSTSGGKKPRLIASQTT
Sbjct: 121 CCKSRGFDCATHVKSTWVPAARRRERQVLSAAAAAAATGGTSSGSTSGGKKPRLIASQTT 180

Query: 253 TNSHTSTSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGG 312
           TNSHTSTSNTPT SFD  S       DMS K+AKKLPEQ+RAPAVFKCVRVTAVEGG G 
Sbjct: 181 TNSHTSTSNTPTRSFDTCS-------DMSYKRAKKLPEQVRAPAVFKCVRVTAVEGG-GS 240

Query: 313 GGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHL---GDGGSASSPVIDPAD 372
           GGNEYAYQAVVKIGGH+FKGYLYDHGVE AR+GFP LS+LHL   GDGGS SSP+IDP+D
Sbjct: 241 GGNEYAYQAVVKIGGHVFKGYLYDHGVE-AREGFPMLSDLHLGGGGDGGSTSSPIIDPSD 300

Query: 373 VYGSSAARGGGLAGGSGYGNPIN 383
           VYGSSA RGGGLAGGSGYGNPIN
Sbjct: 301 VYGSSAGRGGGLAGGSGYGNPIN 313

[Close]

BLAST of CmUC03G062330 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 234.2 bits (596), Expect = 1.8e-61
Identity = 179/417 (42.93%), Postives = 227/417 (54.44%), Query Frame = 0


Query: 23  FAGDLPAVAAARR--LP-SDSGAFADWVAPPS--AIVADELSLGFN-----------SAA 82
           + G L +VA  RR  LP SDSGAF DW A  +  +   ++LSLGFN           SA+
Sbjct: 2   YIGALCSVATTRRHNLPTSDSGAFTDWAATTTTPSRATEDLSLGFNAGSSVIHGGLGSAS 61

Query: 83  TVPPARMWPSSRPLAVGYGHTAAPAP-DMVGL---------------------------M 142
                  WP    +  G   +AA     MVGL                            
Sbjct: 62  VAAGVPSWPPGSSVRYGLPSSAAATEMGMVGLRDVFLVAPAYHHQNAGVISGSDHMNSNA 121

Query: 143 ASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSGGVQFNGNNLD------------ 202
           A+   +GV V+PLLT   P    +E+++  I+   ++   Q N NN +            
Sbjct: 122 AAAAALGVGVIPLLTAGTPQQ-NVEDSD--INFLGNNRRWQNNNNNHETQYLHFKSTNQT 181

Query: 203 --GFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAA 262
             G      GS S  SG  TC DCGNQAKK+C  RRCR+CCKSRGFDCSTHVKSTWV AA
Sbjct: 182 TVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAA 241

Query: 263 RRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDAS 322
           RRRERQ++   +   A G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF+ S
Sbjct: 242 RRRERQVMPTGANPTA-GSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETS 301

Query: 323 SGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIF 371
           S +            +  P Q+RA AVFKCVRVTAVE G     +EYAYQAVVKIGGH+F
Sbjct: 302 SSR-----QDGGGSREAWPGQVRAAAVFKCVRVTAVEDGD----DEYAYQAVVKIGGHVF 361

[Close]

BLAST of CmUC03G062330 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 216.9 bits (551), Expect = 2.9e-56
Identity = 145/297 (48.82%), Postives = 184/297 (61.95%), Query Frame = 0


Query: 99  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSGGVQFNGNNLD------------ 158
           A+   +GV V+PLLT   P    +E+++  I+   ++   Q N NN +            
Sbjct: 35  AAAAALGVGVIPLLTAGTPQQ-NVEDSD--INFLGNNRRWQNNNNNHETQYLHFKSTNQT 94

Query: 159 --GFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAA 218
             G      GS S  SG  TC DCGNQAKK+C  RRCR+CCKSRGFDCSTHVKSTWV AA
Sbjct: 95  TVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAA 154

Query: 219 RRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDAS 278
           RRRERQ++   +   A G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF+ S
Sbjct: 155 RRRERQVMPTGANPTA-GSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETS 214

Query: 279 SGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIF 338
           S +            +  P Q+RA AVFKCVRVTAVE G     +EYAYQAVVKIGGH+F
Sbjct: 215 SSR-----QDGGGSREAWPGQVRAAAVFKCVRVTAVEDGD----DEYAYQAVVKIGGHVF 274

Query: 339 KGYLYDHGVEAARDGFPTLSNLHLG------DGGSASSPVIDPAD-VYGSSAARGGG 371
           KG+LYD G+E  ++GFP++S+LHLG      +G SAS+P++DP + VYG     GGG
Sbjct: 275 KGFLYDQGLE-PKEGFPSMSDLHLGGSANNHNGVSASAPILDPPNVVYGGGGGSGGG 317

[Close]

BLAST of CmUC03G062330 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 216.9 bits (551), Expect = 2.9e-56
Identity = 145/297 (48.82%), Postives = 184/297 (61.95%), Query Frame = 0


Query: 99  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSGGVQFNGNNLD------------ 158
           A+   +GV V+PLLT   P    +E+++  I+   ++   Q N NN +            
Sbjct: 35  AAAAALGVGVIPLLTAGTPQQ-NVEDSD--INFLGNNRRWQNNNNNHETQYLHFKSTNQT 94

Query: 159 --GFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAA 218
             G      GS S  SG  TC DCGNQAKK+C  RRCR+CCKSRGFDCSTHVKSTWV AA
Sbjct: 95  TVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAA 154

Query: 219 RRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDAS 278
           RRRERQ++   +   A G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF+ S
Sbjct: 155 RRRERQVMPTGANPTA-GSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETS 214

Query: 279 SGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIF 338
           S +            +  P Q+RA AVFKCVRVTAVE G     +EYAYQAVVKIGGH+F
Sbjct: 215 SSR-----QDGGGSREAWPGQVRAAAVFKCVRVTAVEDGD----DEYAYQAVVKIGGHVF 274

Query: 339 KGYLYDHGVEAARDGFPTLSNLHLG------DGGSASSPVIDPAD-VYGSSAARGGG 371
           KG+LYD G+E  ++GFP++S+LHLG      +G SAS+P++DP + VYG     GGG
Sbjct: 275 KGFLYDQGLE-PKEGFPSMSDLHLGGSANNHNGVSASAPILDPPNVVYGGGGGSGGG 317

[Close]

BLAST of CmUC03G062330 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-32
Identity = 91/219 (41.55%), Postives = 120/219 (54.79%), Query Frame = 0


Query: 164 TCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRER-QMLGGASEAAAGG 223
           +C DCGNQAKKDC+H RCR+CCKSRGFDCSTHV+STW+P ARRRER Q L  ++    GG
Sbjct: 93  SCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGG 152

Query: 224 TSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQI 283
           + SG   GG            +S       PT    +SS ++P  +          P ++
Sbjct: 153 SGSGGAGGG-----------GSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEV 212

Query: 284 RAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNL 343
            + A+F+CV+++ V+    GG  +YAYQ  V IGGH+FKG LYD G        P  S +
Sbjct: 213 SSDALFRCVKMSGVD---DGGDGQYAYQTTVNIGGHLFKGILYDQG--------PESSYM 272

Query: 344 HLGDGGSASSPVIDPADVYGSSAARGGGLAGGSGYGNPI 382
             G GGS           + SS+A GGG  GG  +  P+
Sbjct: 273 SGGSGGSD----------HQSSSAGGGG--GGHPFNPPV 277

[Close]

BLAST of CmUC03G062330 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 129.0 bits (323), Expect = 8.0e-30
Identity = 87/228 (38.16%), Postives = 120/228 (52.63%), Query Frame = 0


Query: 133 SSSGGVQFNGNNLDGFGILGGGSSSLNSGAG----TCHDCGNQAKKDCSHRRCRSCCKSR 192
           +S+ G+    +N       GG    + SG+G    +C DCGNQ+KKDCSH RCR+CCKSR
Sbjct: 84  TSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSR 143

Query: 193 GFDCSTHVKSTWVPAARRRERQMLGGASEAAAGGTSSGSTSGGKKPRLIASQTTTNSHTS 252
           G DC THVKSTWVPAA+RRERQ                  S G++P+ +           
Sbjct: 144 GLDCPTHVKSTWVPAAKRRERQQ---------------QLSTGQQPQQLGGSVPKRQR-- 203

Query: 253 TSNTPTPSFDASSGQIPLTADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYA 312
               P  S   +  +IP + + S  +    P ++ + AVF+CVRV++V+        EYA
Sbjct: 204 -ERIPARSTSMAYTRIP-SNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEE----EEYA 263

Query: 313 YQAVVKIGGHIFKGYLYDHGV---EAARDGFPTLSNLHLGDGGSASSP 354
           Y+  V IGGH+FKG LYD G     ++  G   L+ +  G   S+SSP
Sbjct: 264 YKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSP 288

The following BLAST results are available for this feature:

BLAST of CmUC03G062330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056003.1	7.9e-173	88.62	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK27692.1 protein...	[more]
KAG6588219.1	2.7e-149	81.30	Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038878596.1	4.0e-148	91.11	protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]	[more]
XP_008450344.1	3.4e-147	89.81	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]	[more]
XP_011660164.1	1.4e-145	88.85	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN66542.1 hypothetical pro...	[more]

BLAST of CmUC03G062330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	4.1e-55	48.82	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
O65517	4.1e-31	41.55	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9XGX0	1.1e-28	38.16	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
K4B6C9	1.6e-27	39.27	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9LQZ5	2.8e-27	41.90	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]

BLAST of CmUC03G062330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJ85	3.8e-173	88.62	Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BQ17	1.6e-147	89.81	protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103491981 PE=3 S...	[more]
A0A0A0M099	6.8e-146	88.85	Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G628000 PE=3 SV=1	[more]
A0A6J1ID91	4.0e-130	81.11	protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IFF1	1.5e-129	80.80	protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmUC03G062330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12330.4	1.8e-61	42.93	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.2	2.9e-56	48.82	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.1	2.9e-56	48.82	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	2.9e-32	41.55	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	8.0e-30	38.16	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 164..206 e-value: 2.6E-25 score: 86.1
None	No IPR available	PFAM	PF05142	DUF702	coord: 164..330 e-value: 2.4E-56 score: 190.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..263
None	No IPR available	PANTHER	PTHR31604:SF30	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 141..382
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 278..329 e-value: 5.9E-24 score: 81.8
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 141..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G062330.1	CmUC03G062330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding