CmUC11G213530 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G213530
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionReverse transcriptase
LocationCmU531Chr11: 15597624 .. 15600068 (+)
RNA-Seq ExpressionCmUC11G213530
SyntenyCmUC11G213530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCACATGGACGGAAATGAAGAGGCAATTCTTGGAAAAGTTCTTTCCAACCTCGAGAGTAACAAAGATAAGGAAGGAGATTTATGGCACCATGCAGACCGTCGGTGAGACCTTGCATGAGTACTAGGAGCGATTCAAGCACTTGTGTGCCAACTACCCTAACCACCAAATCTCTGATGCTCTTCTCATCCAATACTTCTATGAAGAGCTTGTCCCTAGTGATAGAATTACCATAGACGCGGCGAGTGGTGGTGTGTTCGTAAACAAGACTCCCATTGAGGCCAAACAACTCATCTCCACCATGGCAGAGAACGCCCAGCAGTTCGAAACGCGAGCTCCTCGCAATATCACATGCTCCATCTTCACGAGAGATGAGTGAGATTAGAGCTGGACTTTCTAAACTATCTTCCCTTGTGAAGCAGGTTATTGCTACCAGGCAACCGTCTTGGGAGGAAGCAACTGAAGTCAGTTTTGCTAGCAATCAACAAGATGGAAGGACATATAATTATAACCGTTGGAGAGGCCAAGGACAGAGCAATTCTCGAATGCCTTTGGAGGACATGGTGAAGAGCCTGGCAGAGTCTACAATTCAAATCCAGAAGAACCAGGAGTTGTTCCAACAAACCACCACCACCCACATGCAGAGTATGGCCACTCATATATCTCAACTAGTAGAAGTTGTTAGCTGATCGGACACCAACCAGTGCCTAGTGTGCGTAATGTTAGTGTTGTCTCTGCTATAGGCTGCCTTGAGGCTTCCCAAGCGCCTGTTAATAAGCAAGTGGAGCTTGTGGATGGTGAGAAGGATGAAGTTGACTCACCAAGAAGAAGAAGGGTAAGTTTTGATCCACATCTTGATTTTCACGTTGCTAACGATGTCCTTCGTGCTTCTTTCCCTAGCAGATTAACTGTTACTCAGGGGGGATCACGCAAGGAGAAGGTGAGGTTTGCTCAATCTTCTGAGATAGAAAAGTCTGCTGCTAAGAGAAAGATGGTATGGAATGAGGTCCCTGCTGAGACAAGGAAGCAAGAGAAAAAGGTTAAACAAGAGGCAAACCTTCTAAGTAACTAACCTGTTAAAGAAGGAGACCCAATGCCCTGTCTAATAGGCACTAGAAAATTTGAGCATGTCATGTTAGATCTAGGGTCTGTAATTAACATAATGTCTACCCCTGTATATGCTGACTATCAGTCCCACATCCTACACCATGCTGATATTTAGGTGTAGTTAGCTAACCATTCTCTTGTTAGGCCAGTTGGATTACTAAAAGATATGCTAGTTAAAGTCAAGGGCCTGACTTTCCCTAATGATTTTTATGTCATCAATCTGGACGTTAATTCTTTTGTTTCTCCTTGTAATCTATCTGTGGTTTTAGGGAGATTAGGGCGCTGATCAATGTAGATAAAGGGTCCTTAACCCTAAGGCGCAAGGAAAAATTTGAATTTTTTTTTTGTTTTTGACACCACCACACTACTTATCTTGCTTTTTCTAGTTCTATTCTTCTTTCGGATGGTAGCCAGCCTCCTAAGTTGGGGTGTTGGATGGTGATGGGGCATCCAATGATGAATATGGTTGATGGAGCCGAATACGGTCAGGCATAACGATTTTAAAATTTTGCACTACCTGGAGGAAACCAGGATTTACTTTAATTGCTTTCTTATTTTAGGTTTCTTTTCTATTTATTTTAATTTTTATTTGAATTTAATTATTTCCATCTTCCTTGATTTTTAGGCTTTGTTGCTCTTGGGAAGTTGAAAGAGAATTATTGTTTTGAACCAAACATCACCGCCATCCATTGGGCTAAATTTCAGGGAAGTTTTTCTATTTCCTTTGTATTTGTCCCATGCTTTCTCTTCTTTTATCACATTAGAGAAATTGTTAGATTTTAAGTTGGGGGTGGGGGATGTTTGTGTTCTGGCTAGAGTCCTTGAGCATCTCAGCTCGGACTAAATTTTGTGTGCTTTCATGCTTGCTGATAGCTCTCAAAAAGAGCTATTTTTATGTCTTTAATCCTGCATGCTTGTTTAGTATAATGTGTTTAAATGTCCATTTTGTAGAAATTTGAGCAAATCATGCACTTTGAAGTGTTACGAACTGTACGGGGTTAATTTCGAGTAATCATAAGTGAAATCGGACACCTAGAGCTCAAGGACACTAAAGTTACAAAAATACCCCTAGAGCAAGCACAGAGCAAAATGCAGCATACGCTCAAAGGCAGATAGTAGCTTTGGCGAGAGCATCGCAATGCTCCAAATTTTGACAAAAAAGGAAGACGTGTGTGAGCACAGAGCAACGATGTTCGAGACCTACATTCCAATTTCTACCCAGAGCATAGCAACACTCCATCAGAGCGTAGCGACACCCTCCCCAAGGTTTATGAGGTTGGATATTATGGAGGCTAATGAGTTCACCAAAATTTCTTCTTCTCCTTCATATTTCTAG

mRNA sequence

ATGACCACATGGACGGAAATGAAGAGGCAATTCTTGGAAAAGTTCTTTCCAACCTCGAGAGTAACAAAGATAAGGAAGGAGATTTATGGCACCATGCAGACCGAGCGATTCAAGCACTTGTGTGCCAACTACCCTAACCACCAAATCTCTGATGCTCTTCTCATCCAATACTTCTATGAAGAGCTTGTCCCTAGTGATAGAATTACCATAGACGCGGCGAGTGGTGGTGTGTTCGTAAACAAGACTCCCATTGAGGCCAAACAACTCATCTCCACCATGGCAGAGAACGCCCAGCAGTTCGAAACGCGAGCTCCTCGCAATATCACATGCTCCATCTTCACGAGAGATGAGCAACCGTCTTGGGAGGAAGCAACTGAAGTCAGTTTTGCTAGCAATCAACAAGATGGAAGGACATATAATTATAACCGTTGGAGAGGCCAAGGACAGAGCAATTCTCGAATGCCTTTGGAGGACATGGTGAAGAGCCTGGCAGAGTCTACAATTCAAATCCAGAAGAACCAGGAGTTGTTCCAACAAACCACCACCACCCACATGCAGATGCCTAGTGTGCGTAATGTTAGTGTTGTCTCTGCTATAGGCTGCCTTGAGGCTTCCCAAGCGCCTGTTAATAAGCAAGTGGAGCTTGTGGATGGTGAGAAGGATGAAGTTGACTCACCAAGAAGAAGAAGGGTAAGTTTTGATCCACATCTTGATTTTCACGTTGCTAACGATGTCCTTCGTGCTTCTTTCCCTAGCAGATTAACTGTTACTCAGGGGGGATCACGCAAGGAGAAGGTGAGGTTTGCTCAATCTTCTGAGATAGAAAAGTCTGCTGCTAAGAGAAAGATGGTATGGAATGAGGTCCCTGCTGAGACAAGGAAGCAAGAGAAAAAGGTTAAACAAGAGGCAAACCTTCTAAGCACTAGAAAATTTGAGCATGTCATGTTAGATCTAGGGTCTGTAATTAACATAATGTCTACCCCTGTATATGCTGACTATCATTCTATTCTTCTTTCGGATGGTAGCCAGCCTCCTAAGTTGGGGTGTTGGATGGTGATGGGGCATCCAATGATGAATATGGTTGATGGAGCCGAATACGGCTTTGTTGCTCTTGGGAAGTTGAAAGAGAATTATTGTTTTGAACCAAACATCACCGCCATCCATTGGGCTAAATTTCAGGGAAGTTTTTCTATTTCCTTTAGCAAGCACAGAGCAAAATGCAGCATACGCTCAAAGGCAGATAGTAGCTTTGGCGAGAGCATCGCAATGCTCCAAATTTTGACAAAAAAGGAAGACGTGTGTGAGCACAGAGCAACGATGTTCGAGACCTACATTCCAATTTCTACCCAGAGCATAGCAACACTCCATCAGAGCGTAGCGACACCCTCCCCAAGGTTTATGAGGTTGGATATTATGGAGGCTAATGAGTTCACCAAAATTTCTTCTTCTCCTTCATATTTCTAG

Coding sequence (CDS)

ATGACCACATGGACGGAAATGAAGAGGCAATTCTTGGAAAAGTTCTTTCCAACCTCGAGAGTAACAAAGATAAGGAAGGAGATTTATGGCACCATGCAGACCGAGCGATTCAAGCACTTGTGTGCCAACTACCCTAACCACCAAATCTCTGATGCTCTTCTCATCCAATACTTCTATGAAGAGCTTGTCCCTAGTGATAGAATTACCATAGACGCGGCGAGTGGTGGTGTGTTCGTAAACAAGACTCCCATTGAGGCCAAACAACTCATCTCCACCATGGCAGAGAACGCCCAGCAGTTCGAAACGCGAGCTCCTCGCAATATCACATGCTCCATCTTCACGAGAGATGAGCAACCGTCTTGGGAGGAAGCAACTGAAGTCAGTTTTGCTAGCAATCAACAAGATGGAAGGACATATAATTATAACCGTTGGAGAGGCCAAGGACAGAGCAATTCTCGAATGCCTTTGGAGGACATGGTGAAGAGCCTGGCAGAGTCTACAATTCAAATCCAGAAGAACCAGGAGTTGTTCCAACAAACCACCACCACCCACATGCAGATGCCTAGTGTGCGTAATGTTAGTGTTGTCTCTGCTATAGGCTGCCTTGAGGCTTCCCAAGCGCCTGTTAATAAGCAAGTGGAGCTTGTGGATGGTGAGAAGGATGAAGTTGACTCACCAAGAAGAAGAAGGGTAAGTTTTGATCCACATCTTGATTTTCACGTTGCTAACGATGTCCTTCGTGCTTCTTTCCCTAGCAGATTAACTGTTACTCAGGGGGGATCACGCAAGGAGAAGGTGAGGTTTGCTCAATCTTCTGAGATAGAAAAGTCTGCTGCTAAGAGAAAGATGGTATGGAATGAGGTCCCTGCTGAGACAAGGAAGCAAGAGAAAAAGGTTAAACAAGAGGCAAACCTTCTAAGCACTAGAAAATTTGAGCATGTCATGTTAGATCTAGGGTCTGTAATTAACATAATGTCTACCCCTGTATATGCTGACTATCATTCTATTCTTCTTTCGGATGGTAGCCAGCCTCCTAAGTTGGGGTGTTGGATGGTGATGGGGCATCCAATGATGAATATGGTTGATGGAGCCGAATACGGCTTTGTTGCTCTTGGGAAGTTGAAAGAGAATTATTGTTTTGAACCAAACATCACCGCCATCCATTGGGCTAAATTTCAGGGAAGTTTTTCTATTTCCTTTAGCAAGCACAGAGCAAAATGCAGCATACGCTCAAAGGCAGATAGTAGCTTTGGCGAGAGCATCGCAATGCTCCAAATTTTGACAAAAAAGGAAGACGTGTGTGAGCACAGAGCAACGATGTTCGAGACCTACATTCCAATTTCTACCCAGAGCATAGCAACACTCCATCAGAGCGTAGCGACACCCTCCCCAAGGTTTATGAGGTTGGATATTATGGAGGCTAATGAGTTCACCAAAATTTCTTCTTCTCCTTCATATTTCTAG

Protein sequence

MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQTERFKHLCANYPNHQISDALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRAPRNITCSIFTRDEQPSWEEATEVSFASNQQDGRTYNYNRWRGQGQSNSRMPLEDMVKSLAESTIQIQKNQELFQQTTTTHMQMPSVRNVSVVSAIGCLEASQAPVNKQVELVDGEKDEVDSPRRRRVSFDPHLDFHVANDVLRASFPSRLTVTQGGSRKEKVRFAQSSEIEKSAAKRKMVWNEVPAETRKQEKKVKQEANLLSTRKFEHVMLDLGSVINIMSTPVYADYHSILLSDGSQPPKLGCWMVMGHPMMNMVDGAEYGFVALGKLKENYCFEPNITAIHWAKFQGSFSISFSKHRAKCSIRSKADSSFGESIAMLQILTKKEDVCEHRATMFETYIPISTQSIATLHQSVATPSPRFMRLDIMEANEFTKISSSPSYF
Homology
BLAST of CmUC11G213530 vs. NCBI nr
Match: XP_027155977.1 (uncharacterized protein LOC113756537 [Coffea eugenioides])

HSP 1 Score: 140.6 bits (353), Expect = 3.6e-29
Identity = 108/288 (37.50%), Postives = 128/288 (44.44%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQT---------ERFKHLCANYPNHQISD 60
           +TTW ++KR+FLEKFFP SR   IRKEI G  Q          ERFK LCAN P+HQISD
Sbjct: 101 ITTWEDLKRRFLEKFFPASRAANIRKEICGVRQANWEILYEYWERFKQLCANCPHHQISD 160

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRAPRNI--- 120
            LLIQYFYE L P DR  +DAASGG  VNKT  +A  LISTMAEN+QQF  RA   I   
Sbjct: 161 QLLIQYFYEGLSPMDRSMLDAASGGALVNKTTDKATLLISTMAENSQQFGVRADGAIRRV 220

Query: 121 -------------------------------TCSI------------------------- 180
                                          TCSI                         
Sbjct: 221 NEVNHSDLEGKLYELTSLVRQMARGQLQSVKTCSICAASGHVTDMCPTLQEDSPEQANIV 280

Query: 181 -------------FTRDEQPSWEEATEVSFASNQQDGRTYNYNRWRGQ--GQSNSRMPLE 206
                        F     P W       +AS     + Y   R   Q    SNS M LE
Sbjct: 281 GDFSGPPPRRNDPFAPTYNPGWRNHPNFIYASKPPGVQQYFQPRPPVQQPSTSNSNMTLE 340

BLAST of CmUC11G213530 vs. NCBI nr
Match: XP_022156327.1 (uncharacterized protein LOC111023248 [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 6.2e-29
Identity = 140/446 (31.39%), Postives = 196/446 (43.95%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQT---------ERFKHLCANYPNHQISD 60
           +TTW +MKR FL+KFFP SR   IRKEIYG  Q          ERFK LCA++P+HQISD
Sbjct: 100 ITTWNKMKRLFLDKFFPASRAANIRKEIYGITQISGETLYEYWERFKRLCASFPHHQISD 159

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRAPRNIT-- 120
             LIQYFYE L+P DR  IDAASG   V+KTP  AK LI  MAEN+QQF  R   ++T  
Sbjct: 160 QHLIQYFYEGLLPMDRSMIDAASGAALVDKTPEAAKPLILNMAENSQQFGFRTGGSVTQV 219

Query: 121 ------------------------------------CSIFTRDEQPSWEEATEVS-FASN 180
                                                + F + +Q   +E   +  F+S 
Sbjct: 220 NEVSELKSQISDLTTLVRQIAVGEKPREMYALQGYPTNTFPQFQQDFIQEVKAIGRFSSP 279

Query: 181 QQDGRTY--NYN-RWRGQGQ--------------------SNSRMPLEDMVKSLAESTIQ 240
           Q++   Y  +YN  WR                        SNS M LE++VK+LA ST+Q
Sbjct: 280 QRNYDPYANHYNPGWRDHPNLSYGNQNFIRPPPPPMQTQASNSGMSLEEIVKNLANSTLQ 339

Query: 241 IQKN-----QELFQQTTTTHMQM------------------PSVRNVSVVSAIGCLEASQ 300
            Q+      Q L  Q T     M                  P    V  +SA+       
Sbjct: 340 FQQETRVGMQNLGNQITQLATSMSRLEAQSSGXLPSQIEVNPKXNQVEKISAVMLRNEED 399

Query: 301 APV----NKQVELVDGEKDEVDSPRRRRVSFDPHLDFHVANDVLRASFPSRLTVTQGGSR 349
            P+     KQ EL + EK E        ++FDP L   +++      FPSR         
Sbjct: 400 IPLVSIPLKQNELSE-EKKETSPNVSCGINFDPPLS--LSSYTSPPPFPSRF-------N 459

BLAST of CmUC11G213530 vs. NCBI nr
Match: XP_031270861.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116129251 [Pistacia vera])

HSP 1 Score: 138.7 bits (348), Expect = 1.4e-28
Identity = 113/312 (36.22%), Postives = 157/312 (50.32%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQ---------TERFKHLCANYPNHQISD 60
           +TTW EMK+ FLE++FP SR   IRKEI G  Q          ERFK LCA+ P+HQISD
Sbjct: 160 VTTWNEMKKMFLERYFPASRAATIRKEICGIRQYNGETLYEYXERFKKLCASCPHHQISD 219

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETR--APRNIT 120
            LLIQY YE L+P +R  IDAASGG  V+KTP  AKQLIS MA N+QQF TR   P    
Sbjct: 220 QLLIQYLYERLLPMERNIIDAASGGALVDKTPEAAKQLISNMAANSQQFGTRHDTPPKKV 279

Query: 121 CSIFTRDEQPSWEEATEV--------SFASNQQDGRTYNYNRWRGQGQSNSRMP------ 180
             + T   +    + T +        ++  N+Q G  +N+ + R Q     + P      
Sbjct: 280 NEVSTSSIEQQLSDLTSLVRQLAIGNAYGGNRQVGGGHNFFQNRQQQSFQPKQPASQSSN 339

Query: 181 --LEDMVKSLAESTIQIQKNQELFQQTTTTHMQMPSVRNVSVVSAIGCLEASQAPVNKQ- 240
             LED+VKSLA +T Q +++     Q+    M   +     + + +G    SQ  V+ + 
Sbjct: 340 SSLEDIVKSLALNTKQFEQDTRSSIQSLENQMGQMATVISRLEAQVGGKLPSQTLVDPKE 399

Query: 241 ----VELVDGEKDE---VDSPR-RRRVSFDPHLDFHVANDVLRASFPSRLTVTQGGSRKE 277
               V L  G+K E   +DSP   + V  +  ++   A   L+   P+     Q  +   
Sbjct: 400 NVNVVTLRSGKKVEEPKLDSPSVAKEVEIEDEIEKEEATTELKV-IPNPSIQLQSNTLPF 459

BLAST of CmUC11G213530 vs. NCBI nr
Match: XP_019178790.1 (PREDICTED: uncharacterized protein LOC109173896 [Ipomoea nil])

HSP 1 Score: 137.1 bits (344), Expect = 4.0e-28
Identity = 69/117 (58.97%), Postives = 86/117 (73.50%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQT---------ERFKHLCANYPNHQISD 60
           + TW ++K+ FLEKFFPTSR T IRKEIYG  Q          ERFK LC++ P+HQISD
Sbjct: 36  VNTWNDVKKLFLEKFFPTSRATNIRKEIYGIRQCTGETLYEYWERFKELCSSCPHHQISD 95

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRAPRNI 109
             LIQYFYE L+P+DR  +DA+SGG   +KTP +A+QLISTMAEN+QQ+ TRA  +I
Sbjct: 96  QHLIQYFYEGLLPTDRSMVDASSGGSLADKTPTDARQLISTMAENSQQYGTRADGSI 152

BLAST of CmUC11G213530 vs. NCBI nr
Match: XP_019055703.1 (PREDICTED: uncharacterized protein LOC104611813 [Nelumbo nucifera])

HSP 1 Score: 137.1 bits (344), Expect = 4.0e-28
Identity = 100/265 (37.74%), Postives = 130/265 (49.06%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQ---------TERFKHLCANYPNHQISD 60
           +TTW E+KR FLEK+FP SR   IRKEI G  Q          E FK LCA+ P+HQIS+
Sbjct: 122 ITTWNELKRLFLEKYFPASRAANIRKEICGVRQYNGESLHEYWECFKKLCASCPHHQISE 181

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRAPR----- 120
            LLIQYFYE L P+DR  IDAASGG  V+KTP  A+ LI+ M  N+QQF TR        
Sbjct: 182 QLLIQYFYEGLQPTDRSMIDAASGGALVDKTPEAARNLIANMVANSQQFGTRLDPPSKHV 241

Query: 121 NITCSI--------------------------------------FTRDEQPSWEEATEVS 180
           N  C I                                      ++    P W +   +S
Sbjct: 242 NEACGICLVVGHPTDMCPTLQEEPIEQVNAAGGFPGQPQRNYDPYSSTYNPGWRDHPNLS 301

Query: 181 FASNQ------QDGRTYNYNRWRGQGQSNSRMPLEDMVKSLAESTIQIQKNQELFQQTTT 208
           + + Q      Q  + Y   +  GQ  SNS M LED+VKSLA +T+Q Q+ ++ FQQ   
Sbjct: 302 YGNPQNCPNFPQYQQPYPPRQQSGQ-TSNSGMSLEDIVKSLATNTLQFQQKKKQFQQEAR 361

BLAST of CmUC11G213530 vs. ExPASy TrEMBL
Match: A0A6J1DRS5 (uncharacterized protein LOC111023248 OS=Momordica charantia OX=3673 GN=LOC111023248 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.0e-29
Identity = 140/446 (31.39%), Postives = 196/446 (43.95%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQT---------ERFKHLCANYPNHQISD 60
           +TTW +MKR FL+KFFP SR   IRKEIYG  Q          ERFK LCA++P+HQISD
Sbjct: 100 ITTWNKMKRLFLDKFFPASRAANIRKEIYGITQISGETLYEYWERFKRLCASFPHHQISD 159

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRAPRNIT-- 120
             LIQYFYE L+P DR  IDAASG   V+KTP  AK LI  MAEN+QQF  R   ++T  
Sbjct: 160 QHLIQYFYEGLLPMDRSMIDAASGAALVDKTPEAAKPLILNMAENSQQFGFRTGGSVTQV 219

Query: 121 ------------------------------------CSIFTRDEQPSWEEATEVS-FASN 180
                                                + F + +Q   +E   +  F+S 
Sbjct: 220 NEVSELKSQISDLTTLVRQIAVGEKPREMYALQGYPTNTFPQFQQDFIQEVKAIGRFSSP 279

Query: 181 QQDGRTY--NYN-RWRGQGQ--------------------SNSRMPLEDMVKSLAESTIQ 240
           Q++   Y  +YN  WR                        SNS M LE++VK+LA ST+Q
Sbjct: 280 QRNYDPYANHYNPGWRDHPNLSYGNQNFIRPPPPPMQTQASNSGMSLEEIVKNLANSTLQ 339

Query: 241 IQKN-----QELFQQTTTTHMQM------------------PSVRNVSVVSAIGCLEASQ 300
            Q+      Q L  Q T     M                  P    V  +SA+       
Sbjct: 340 FQQETRVGMQNLGNQITQLATSMSRLEAQSSGXLPSQIEVNPKXNQVEKISAVMLRNEED 399

Query: 301 APV----NKQVELVDGEKDEVDSPRRRRVSFDPHLDFHVANDVLRASFPSRLTVTQGGSR 349
            P+     KQ EL + EK E        ++FDP L   +++      FPSR         
Sbjct: 400 IPLVSIPLKQNELSE-EKKETSPNVSCGINFDPPLS--LSSYTSPPPFPSRF-------N 459

BLAST of CmUC11G213530 vs. ExPASy TrEMBL
Match: A0A1U8QA90 (uncharacterized protein LOC104611813 OS=Nelumbo nucifera OX=4432 GN=LOC104611813 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-28
Identity = 100/265 (37.74%), Postives = 130/265 (49.06%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQ---------TERFKHLCANYPNHQISD 60
           +TTW E+KR FLEK+FP SR   IRKEI G  Q          E FK LCA+ P+HQIS+
Sbjct: 122 ITTWNELKRLFLEKYFPASRAANIRKEICGVRQYNGESLHEYWECFKKLCASCPHHQISE 181

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRAPR----- 120
            LLIQYFYE L P+DR  IDAASGG  V+KTP  A+ LI+ M  N+QQF TR        
Sbjct: 182 QLLIQYFYEGLQPTDRSMIDAASGGALVDKTPEAARNLIANMVANSQQFGTRLDPPSKHV 241

Query: 121 NITCSI--------------------------------------FTRDEQPSWEEATEVS 180
           N  C I                                      ++    P W +   +S
Sbjct: 242 NEACGICLVVGHPTDMCPTLQEEPIEQVNAAGGFPGQPQRNYDPYSSTYNPGWRDHPNLS 301

Query: 181 FASNQ------QDGRTYNYNRWRGQGQSNSRMPLEDMVKSLAESTIQIQKNQELFQQTTT 208
           + + Q      Q  + Y   +  GQ  SNS M LED+VKSLA +T+Q Q+ ++ FQQ   
Sbjct: 302 YGNPQNCPNFPQYQQPYPPRQQSGQ-TSNSGMSLEDIVKSLATNTLQFQQKKKQFQQEAR 361

BLAST of CmUC11G213530 vs. ExPASy TrEMBL
Match: A0A6P6WZ36 (uncharacterized protein LOC113737580 OS=Coffea arabica OX=13443 GN=LOC113737580 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-28
Identity = 71/113 (62.83%), Postives = 81/113 (71.68%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQT---------ERFKHLCANYPNHQISD 60
           +TTW  +KR+FLEKFFPTSR   IRKEI G  Q          +RFK LCA+ P+HQISD
Sbjct: 63  ITTWEALKRKFLEKFFPTSRAANIRKEICGVRQANGETLYEYWKRFKQLCASCPHHQISD 122

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRA 105
            LLIQYFYE L P DR  +DAASGG  VNKTP EAK LIS +AEN+QQF TR+
Sbjct: 123 QLLIQYFYERLQPMDRSMVDAASGGALVNKTPDEAKLLISNIAENSQQFGTRS 175

BLAST of CmUC11G213530 vs. ExPASy TrEMBL
Match: A0A6P6W274 (uncharacterized protein LOC113729335 OS=Coffea arabica OX=13443 GN=LOC113729335 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-28
Identity = 106/278 (38.13%), Postives = 124/278 (44.60%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQT---------ERFKHLCANYPNHQISD 60
           +TTW E+KR+FLEKFFPTSR   IRKEI G  Q          ERFK LCA+ P+HQI D
Sbjct: 166 ITTWEELKRRFLEKFFPTSRAANIRKEICGVRQANGETLYEYWERFKQLCASCPHHQIPD 225

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETRAPRNI--- 120
            LLIQYFYE L P DR  +DAASGG  VNKT  E   LISTMAEN+QQF  RA   I   
Sbjct: 226 QLLIQYFYEGLSPMDRSMLDAASGGALVNKTTDETTLLISTMAENSQQFGVRADGAIRRV 285

Query: 121 -------------------------------TCSI------------------------- 180
                                          TC I                         
Sbjct: 286 NEVNHSDLEGKLSELTSLVRQMARGQLQSVKTCGICAAPGHMTDMCPTLQEDSPEQANIV 345

Query: 181 -------------FTRDEQPSWEEATEVSFASNQQDGRTYNYNRWRGQ--GQSNSRMPLE 194
                        F  +  P W      S+AS     + +   R   Q    SNS M LE
Sbjct: 346 GDFSGPPPRRNDPFAPNYNPGWRNHPNFSYASKPPSFQQHFQPRPPVQQPSTSNSNMSLE 405

BLAST of CmUC11G213530 vs. ExPASy TrEMBL
Match: A0A6P6WVI1 (uncharacterized protein LOC113735902 OS=Coffea arabica OX=13443 GN=LOC113735902 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-28
Identity = 107/297 (36.03%), Postives = 136/297 (45.79%), Query Frame = 0

Query: 1   MTTWTEMKRQFLEKFFPTSRVTKIRKEIYGTMQT---------ERFKHLCANYPNHQISD 60
           +T W  +KRQFLEKFF  SR   IRKEI G  Q          ERFK LCA+ P+HQI D
Sbjct: 166 ITMWEGLKRQFLEKFFLASRAANIRKEICGIRQANGETLNEYWERFKQLCASCPHHQIPD 225

Query: 61  ALLIQYFYEELVPSDRITIDAASGGVFVNKTPIEAKQLISTMAENAQQFETR-------- 120
            LLIQYFYE L+P +R  +DAASG V VNKTP EAK LIS MAEN+QQF TR        
Sbjct: 226 QLLIQYFYEGLLPMERSMVDAASGRVLVNKTPDEAKLLISNMAENSQQFGTRSEGITRRV 285

Query: 121 -------------------------------------APRNITCSIFTRDEQPSWEEATE 180
                                                AP ++T    T  E P +E+A  
Sbjct: 286 NKVNHVDLAHQLIELTTLVRQMAMGKVQTVKTCGICAAPEHVTDMCPTLQEDP-YEQANA 345

Query: 181 VSFASNQQDGR------TYNYNRWRGQG------------------------QSNSRMPL 214
           +   S     R      TYN   W                             S+S M L
Sbjct: 346 MGGMSGPPQWRNDPYAPTYNPGWWNHSNFSYAQKPSGFQKPFQQRQPVQQPFTSDSGMSL 405

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_027155977.13.6e-2937.50uncharacterized protein LOC113756537 [Coffea eugenioides][more]
XP_022156327.16.2e-2931.39uncharacterized protein LOC111023248 [Momordica charantia][more]
XP_031270861.11.4e-2836.22LOW QUALITY PROTEIN: uncharacterized protein LOC116129251 [Pistacia vera][more]
XP_019178790.14.0e-2858.97PREDICTED: uncharacterized protein LOC109173896 [Ipomoea nil][more]
XP_019055703.14.0e-2837.74PREDICTED: uncharacterized protein LOC104611813 [Nelumbo nucifera][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DRS53.0e-2931.39uncharacterized protein LOC111023248 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A1U8QA901.9e-2837.74uncharacterized protein LOC104611813 OS=Nelumbo nucifera OX=4432 GN=LOC104611813... [more]
A0A6P6WZ362.5e-2862.83uncharacterized protein LOC113737580 OS=Coffea arabica OX=13443 GN=LOC113737580 ... [more]
A0A6P6W2743.3e-2838.13uncharacterized protein LOC113729335 OS=Coffea arabica OX=13443 GN=LOC113729335 ... [more]
A0A6P6WVI14.3e-2836.03uncharacterized protein LOC113735902 OS=Coffea arabica OX=13443 GN=LOC113735902 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24559:SF334SUBFAMILY NOT NAMEDcoord: 1..103
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G213530.1CmUC11G213530.1mRNA