Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCCTTTATTTTGCTTTCGTTTGCGTTTGAGTCTCGGGTACAATTCGTTTGCTTTCGTTTGCGCTTGGTTTTCTGTTGCATGTGTTGGTGTTAGGATTGTTAGAAGTGCCCGAATTGTACAATAGATTAGGGTTTAAGAGATTACAGCATTGAGGCACGAGAGAATGCACCGAGATCGAGTGTAGAAGATGAGAGTATTTTGGAGACTGTGGGAGACGATATTCGTTTGCTCTCGACTCTTGGTTTTCTATTGCATGTGCTAATGTAGATGGTTGTGTGGGTGCTTTTGGTGGATGGTCGAGAGCTGAAAGTCGAGTGTATCCAAATCTAGGGTTCTAAACAAAACTAGAGTCGAGAGTATCAAGAGTCAAGAGTACCGAGAGTTGAGTGTCGAGAGTCGAGAGCAGGGGTCGAGAGCGAGGGTTTTACATAATGCATTTTTTGCTTTATTTGTTTATTTCCCTTCACCTGATCATGTTTTTTGCTTGCACTTGTAGATGGCCAACTTCAAGATTGTTGCTACAGATCGTTTTCCTGCCCAAGCTACTAGCTTATCATCACATATTGGAGTTGTGAACCGATTGATAAAAGAGAAGCTGACAGATAGGCAGCTATAA mRNA sequence ATGCCTTTATTTTGCTTTCGTTTGCGTTTGAGTCTCGGGTACAATTCGTTTGCTTTCGTTTGCGCTTGGTTTTCTGTTGCATGTGTTGGTGTTAGGATTGTTAGAAACTGTGGGAGACGATATTCGTTTGCTCTCGACTCTTGGTTTTCTATTGCATGTGCTAATGTAGATGGTTGTGTGGGTGCTTTTGGTGGATGGTCGAGAGCTGAAAGTCGAGTTCGAGAGTATCAAGAGTCAAGAGTACCGAGAGTTGAGTGTCGAGAGTCGAGAGCAGGGATGGCCAACTTCAAGATTGTTGCTACAGATCGTTTTCCTGCCCAAGCTACTAGCTTATCATCACATATTGGAGTTGTGAACCGATTGATAAAAGAGAAGCTGACAGATAGGCAGCTATAA Coding sequence (CDS) ATGCCTTTATTTTGCTTTCGTTTGCGTTTGAGTCTCGGGTACAATTCGTTTGCTTTCGTTTGCGCTTGGTTTTCTGTTGCATGTGTTGGTGTTAGGATTGTTAGAAACTGTGGGAGACGATATTCGTTTGCTCTCGACTCTTGGTTTTCTATTGCATGTGCTAATGTAGATGGTTGTGTGGGTGCTTTTGGTGGATGGTCGAGAGCTGAAAGTCGAGTTCGAGAGTATCAAGAGTCAAGAGTACCGAGAGTTGAGTGTCGAGAGTCGAGAGCAGGGATGGCCAACTTCAAGATTGTTGCTACAGATCGTTTTCCTGCCCAAGCTACTAGCTTATCATCACATATTGGAGTTGTGAACCGATTGATAAAAGAGAAGCTGACAGATAGGCAGCTATAA Protein sequence MPLFCFRLRLSLGYNSFAFVCAWFSVACVGVRIVRNCGRRYSFALDSWFSIACANVDGCVGAFGGWSRAESRVREYQESRVPRVECRESRAGMANFKIVATDRFPAQATSLSSHIGVVNRLIKEKLTDRQL
Homology
BLAST of CmUC02G036140.1 vs. NCBI nr
Match: XP_038887207.1 (uncharacterized protein LOC120077396 [Benincasa hispida]) HSP 1 Score: 54.3 bits (129), Expect = 9.2e-04 Identity = 27/45 (60.00%), Postives = 30/45 (66.67%), Query Frame = 0 Query: 87 RESRAGMANFKIVATDRFPAQATSLSSHIGVVNRLIKEKLTDRQL 132 RESR FKI DRFP Q TSLSSHIG N+++KEKLT L Sbjct: 3 RESRNQARQFKIPPHDRFPGQTTSLSSHIGTTNKIVKEKLTPTML 47
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038887207.1 | 9.2e-04 | 60.00 | uncharacterized protein LOC120077396 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | PROSITE | PS51257 | PROKAR_LIPOPROTEIN | coord: 1..28 score: 5.0 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmUC02G036140.1-exon | CmUC02G036140.1-exon-CmU531Chr02:19483135..19483240 | exon |
CmUC02G036140.1-exon | CmUC02G036140.1-exon-CmU531Chr02:19483341..19483452 | exon |
CmUC02G036140.1-exon | CmUC02G036140.1-exon-CmU531Chr02:19483487..19483544 | exon |
CmUC02G036140.1-exon | CmUC02G036140.1-exon-CmU531Chr02:19483633..19483752 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmUC02G036140.1-cds | CmUC02G036140.1-cds-CmU531Chr02:19483135..19483240 | CDS |
CmUC02G036140.1-cds | CmUC02G036140.1-cds-CmU531Chr02:19483341..19483452 | CDS |
CmUC02G036140.1-cds | CmUC02G036140.1-cds-CmU531Chr02:19483487..19483544 | CDS |
CmUC02G036140.1-cds | CmUC02G036140.1-cds-CmU531Chr02:19483633..19483752 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CmUC02G036140.1 | CmUC02G036140.1-protein | polypeptide |
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