CmUC11G208680 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G208680
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	E3 ubiquitin-protein ligase
Location	CmU531Chr11: 5104798 .. 5113968 (-)
RNA-Seq Expression	CmUC11G208680
Synteny	CmUC11G208680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAGAAAAGAAAAACAAAACAAAACAAAATAGAAACAGTTGGATCTAAAATGGTTTGGCTTCTCATTTTACTTCTTCTCAATTTGAGTTTCTTTGATCTTTCTGAGGCTAGGCATCACAGGAAGCTCCCTTCGGCCGTCGTTGTCGGTACCGTCTTCTGCGACACATGCTTTCAAGAGAAATTTTCCAAGACCAGTCACTTCATTTCAGGTAGTTTTACCACGTCTAGTGTTGGAAAGCTTAAATTTGTGTAGTTGCATAACTCAACTAGCTAGTTAAGACCAAGTATGGGGTCCTGTTGCCTGCTCAGTGAGTCAGGTCTGATGGAGTTTGAGTGCAACATGCCTAAAACCTAAGTTGTATTCGTATTTATGTTATTTACAATTTTGACCTTAGGGTTGAGAGAGGTGCACTATATATTTCTCTTCAATAATAAAATTGCTCACTCCCTTTGCTCGTGGACGTAGCTAACATGCTGTTAGTGAATCATGTAAATCTATGTGTCGATTTTCTCTAGTGTTTATGTTTTCATCAGTTCTCTTTGTTTGTCTATTTCATAATGGTTGATATGTACTATGTAGGTGCAACGGTTGCTGTCGAATGTGGAGGAGAATCAAAACCGAGTTTTAGAGAAGAAGTAAAGACAGACAAAAGAGGGGAATTCAAGGTTAATTTGCCAGTTTTAGTGACCAAACATGTGAAGATGATTGAGGAATGTTATGTGCAATTAATTAAAAGTAGTGAACCATATTGTGCAGTGGCTGCAACAGCAAAATCATCTTCCCTTCAACTCAAGTCAAAAAAACAAGGCGCACACACATTCTCAGCTGGCTTCTTCACTTTCAAGCCTCTAAAACAACCAAACCTTTGCAACCAAAAGCCTCAATATTCCAACACATTTGATGACATGAAACAAGTCCTCCCCGCGCCCCCACCGTTCGACTTCCCGAGCTTGCCATCTCCTATCCAAAACCCGTCCGTGCCGAACGTTCCTCGGATTTACGATAACCTTCCTCCTCTCCCATTGCTTCCTGGCCTTCTTCCATTGCCTCCATTGCCTCCATTGCCACCACTCCCTCCTCTTCCACCTCTCCCTGGCTTTCCACTGTTCCCACCAAAAAAGAATGATGAAAATAATGTACCAAATGAAATTCCAAACACAAGTGCAAAACAACATCAGTTTCATCCACAGACTTTGCTTCCAATGCCACCCATTAAGCCTTTGAAAAGGCCACATTTTTTTGGTCTGCCTCCACACAGGCTGCACCACCACTACCCTCTCTTGCCTCCATTCTCAACTCATACGGCAGCTGCAGCGGGGGCCGGTGACTTGGCCCCGTCACAGCCGTTACCTTTTTCGCTCCCTTCAGTGCCTGGCCTGCCTAAGATCTCCTCACCTCCAAAGCAAACTTTTCCTTGAAATATTTTAACATTTGAACCAAAGATTTAGAATAAGTGGTAATTGCAAATATAGCAATTAGGTGCTAAAAGTATTAGCAAATATAACACAATGCAAAAGAATTTGTAGATATAGTAAAATCTAGATCCAACTCTTAGATTCTATCAGTAATAGACTATATCGTTGATAAGTAAAATCTTGATAAGAGTCTATCAATGGTAAAATCTATCACTGGTAGATTTTGCTATACTTGCAATTCTTTGAAATTGTTGTTATACACTAAATTATTAGTTTTAAAAGTGCTACTTATTGCAAGTACCCTATTTATTTTCTGCTTGTAACCTTCCGCATCTTTTCTAGTAAAAATCAATAATTGGGAGCTGAATTCGATGGATTTGAGGAAAATTGATAGTTAGGATTTGACATAAAAAGGTTGGTATTGTGTTTTGGATAAGTTTGGTCATATGATTGTTCATGTTGTTGGGATGGATGGGACAACTCTAGCTTTTGTTGAGAAAAGTAGAGTATAATTGGACGATTGATTCAACTTCTTTTAATTTGTTTATGTTATTGAATAAAAATGACATGTTACTAATTTAAATACATTATTTCTAAAAATGGGCTGAAAATTATTGGAACTTAAGACCAAGAATTAAAATACGAGCAATTTGTGAACGGTATTCGGTAAGATTTGAAAGAGGAATCGAAACAAGTGAAATATGTTGCATTTTGGTGATAACATAAACGAGTATGCTTTGCAAAACCAAAAATTAATTATGTATTTGGATTCAACCATTTTTTTTAATCTTTTTTAGTACAACAATTGCAAGTATAGAAATAGAATGTTAGGCCTCTAAGGAGGAAACTTGTATCAATTACTATTGATTAGTACAAATTCAATAATAAATGAAAGGTGCAATTTGTGAAATCTTAATTGAAACCGTCTTCATTATTACTATCATTATTTTATGTAGTTGTTTAGAATTATATAAATTACAAAATCTTAATTGGGTTAAGTGCAGCCCGAATTGCACATGATCATTGCGTTTTTTAAAGGATGGAATGGAATAAATGAAAATATAAGAATAAAAATACAATGCATCTTATTTAACCATATAGAGAGGCCAAACTTCCTATGTTGTTGAGTTTAAAAAGTGAACAAAAGTTAAAAGATAAATTAAATTACAAAAGTTACTTAACATAGCTTATTTAGTTAATATAAATGAAGAGGTTATTTGGTTAATTTATATCAAGAGGTCAAAGTTTCAGAACTTTTTATTTAGATTTAGTCTTAAACATATAAAATAAAAAAAGTGGTTTGAAAGTAAAATATAGGTTAAATTATAAAAAAATATGATATTTGTTTTCAAAATAACCTTGTTTGATAAGATTTTCGAAAAAAATTTAATTTGCTAAATAAATTTTGAATTTGTATTCATTTTAAGTATAATCTCTAATATTTAATTCTTTGATGCTTTTCCTAAATTTGTGTTGAGGGCTTTGCAACTTGTCCTTGATATTGATTTGGCTTTACAACTTTACAGATCTTCAGAGTTTGAGAGCTTGAGAGCTTTGATCTTTAAAGCTTTAGAGATTGAGAGCTATAGTCTTCATAACTTTAGAAATTGAGAGCTGTCTTCAAAATTTTAGAGCTAGAGAGCTTCGCTTTTCACTCTTTAGAACCGGAGAGCTTTAGAGTTTTGGTCTTCAAAACTTGAGAGGTAAACAGAGCTTTGATCTTCAAAGCTTGACAACTTCAATTCTTTAAAACTTGAGAGATTTGGTCTTTAGTTTTTTAGAATTTGAGAGTTTTAGAGTTTCGATTTTTAGAGCTTCAATCTTCAGAGCTTGAGAGATTTAGAGCTTCAATCTTCAATTCTTCAAAGCTTAAGAGATTTGGTCTTTAGTTTTTCAAAACTTGAGAGCTTTAGAGTTTTGGTATTCAAAGCTTCGATCTTCAGAGTTTGAAAGCTTCGTTCTTTAGAGCTCCAGAGCTTCAGTTCTCCAAATCTTCCCAAAAGTGAAGGTCGGTTCTTCATTTATGGAGTTTTCACAAGCTTGGGCCTAGTTGCTTTGGGCACCAAATATTGGGGTTGGACTTGGGCACAATACTTTCTTTGGCTCAAATTTCATAATGGGCTTAAATTGGGTTTGACTTTAGACCCGAACGACTTTAATTTCTCTACCCGCTTCAATTTATAATTTCAAGCCTCTAGTAAGATTTATTGATCATGGTCCATGGTTAATCATCGTTGAACACAATCGGATAATTAGAAAGTAGGCTCATGGCATTTTTTTACTTGTCATTTATTTGTCTCAAATTTTATTCGAAGGACACCATAATTCTTAGTTCTTAAATTTAATAAATTGAGTTGTTGGTTGTGATGATTTGACACTTTGTGATTGGTCGAAATTTCTTCCAACAAGCGCTTGTAGATTTTTGTTTGGATAAATTTTACAAAATATTTGTACCTACTTACATGAATAAATGTAAACATGTTGATAAAAATAAAGACACGTGAGGTATCTGTAAAGTATATTAGTTGTCATATTCCTCATTCCAAAATTCAAACGTATGCCCCCAATTTTATGTTCTTTCAAACGCCCCAATTTACTTATTGTATGTGTTTAGATTTGTTCATTTAAGCTACACACAAGCAAACGAGCATTTTTCTGCTAATGAATTTAATGACAAACGCAATTGTTCTGAAAAAATTTCAAATTTCAAAAGCTAAGACCCGATTTGGTAACTAGGTTTTTGTTTCTTCTTTTAAAAATTAAGCCTATAAACACTCATATTCTACCTCTAAATTTCTTGATTTGTTATCTACTTTTTTACCAATGTTTTTAAAAACCTAGCCAAAATCTGAAAACTAAAAAAAGGTAGTTTTTAAAATTTTTGAAATTTGGTTAAGAATTCAACTCTTATACTTAAAAAAGATGCAAATTATTGGAACAAATTGAGAAGAAATAGACTTCATCTTAGAAAACGTAACGATTAATTATTAGCCCTAGAAGTGTCAAAGTATCAGTAGATATAGAACAATGCAAAAGAATTTACAAAATTTAGATCAAGTTCTCACCTATTAGAGTTTCAATAGTCTATATTGCTGAGTTTATAAACGATAAAATCTACCCGCAATTAGAGTCTATCAAAAATAAATTTTGCTATATTTGTAATTATTTAAAAAATAGAAAAGAAATTAGGATTAGAACCAAAAAAGTAATTGAAGGCTGAAATTAGTACCAAATTGTAATATAGTACTAGGAAGCGAGTGGAGATTAATTAGAGCATTTTATCCACCTACCAGCAAAGAGGGCACCGGCAGCGAGCGAGAGAGGAAGAAATCGAGATATTGAGGGAAGAAGGCGGCTTTAATTTCGCGGAATTCATCGCCTTCAATTCATCGCCTTCAATTTTCCAATCCAAATTCCCCTTAAAATGCGCAATCTTGATTTAGCTTGAAATTCCAATATCTGTGTGCGTGATTTTTACCAAAAAGCGCATGTATATAATCTCCGCATATTCTCATTCCTCCCAATTTCCGACTTCCAGGTTTCTCTGTCCTCCACCCACCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCTTCTCCCTCCACTTTACTCCTCTCTCAAGGTACTTCTCTTTTTCCCAACTATTCTCTATGTCCACGGGGACCCTTTTTCATGATCGCCCCATATTTTGTTTGTTCTGTATTGGGTTTCTGATTCTTTTCATGATTTATGCGTATTCGTTGCCCGATCGTCTATTTGTTGAGTTTTATTTTTTTTTTTTCTCATGTGGTTGTCGTATAATTTGAATACTTTGTTGTTTTTTTTTTGTCCTGTACCCCTTATTCTTCAATGGGTACATTGGATGAGTCGTGTATGTTCTGGATGATGATGATCAGCTTGGTTTGCTATTGATATCTTTATGGCATCTCTTTTTCTCATCACCGAAGGAAAGAATCCGGTGTTTTCAGAGGTGACCCAGGAAAAGAAAAGGTCAATTTGGTGAGATGGGTGGGTTGCTTTGACCGAAGGCTGTGGCATTTGATTAACACTTCGATTTGTTTTTGGCTGTTTCAACAATTTTTTCTTTCATTATTGTGATTGTTGCGGTTTTGGATTGCTGCCGACAGATTCGTGTTCCTTTAAATAATGCCGGTTGTTGGTTTAATTTATGATTTAGTCAGAATTGTTGTTTGACTTGCGTTCTAGGTGATGACATTAGCATTCATCACAGTTGCTTTGAGGATAATCCCTTTGGATCCCCATGTCTTTAACCTTACTGAACATAGGCTGCTAATTTTACAGGTGAAAATCACAGTTTAAAAAAATCCAGTTTATCAACTTGAAGAAAGAGGGTACTGGTTCGTGGAGGCAATAGTACTTCTGCGAGCTTATGTACTCTCGTCTCCATTTTCCTGCATAATCATTGGCCGAGACCTCTCCATTTGAATGCAATTGAATAGCTAAATTGGTCTATCTGTTGACTTGGGAATCTGCTGGGTTGGATAATCGAGAATAATAAAAAGATTGGTAGGAGTTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTTGAAGACTATGTTAATCCTAATAGTTCAGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGTTTCTTAAATGCAGTAAGCCCTATTTCTGTTGCAATATGTTATTTTGCCATATTTCACTATCAAGGAGGAAAATAGTAGTATTTATGGATACACATATTGACAATGAGATTTTTCTGGAATGTCAATATTGGTGAAAATTCAAAGAAAAAAAAAAGAAAGTTAGAAATAAAAGATATTTTGAGTACTATACTCTCATATTTTGTCATCACAAAGTTGAAGAAAAAATTTCAAATATTTGTTTTATTTTACTTGGATTTGACATTTACATAGTACTAGAGTCTAGAGTTAAAGAAAATTTATTTTTCATGAAAAATTGATGATAAAAAATTGGAATTACAAATGTTAGGAGGGACATGTCTTGAATATTAATGCTACTTCCTTGTATGTCATATTATTGTGCTGTTTGTTTTCTTTTGTATCTCCATATTTCCTACCTATATTCTTTCCTTTGCTTTATAATGCACGTTAGCATGGATAAATATATATAACCTGGAACCCGCTATTCATAATAATATATTTATGGAAAAACACGTGTAATTTGTTTCCAGCGTCACAAGTGTTTAGCTGTAGTTTGTGATTTTATTCTCAAGATATTTATATTAATCTGTTTTTCCTCTTACTTCCGCTAGTACACATTGATTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACATCCATGAATTCCACAGCATCGACAGATAACTCTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGATCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAAGAGTCAGAACCTTTAAGAAGTGATGTGGATACCGATTCAGATTCTTTGGGCTCAGCAGGCAAATGGAATGGTTCTGCTTGTCTTGAGGAATCTAAAGAAAACCTTGGCAAATCATCTCTAAAGTTCCCTTCAACTAAATCTACCACTGGACTTGGGTATTCTTATACATCCTCCGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGGTTGATTTATTTAATTAACTTCATTTTATTATGGATTTTATTTTCTACTCTATTGTTTTTGCGCTTGATGTTCTTGTTTGTTGAGCTTCTGGGTGGCAAACAAGTTTAGTGATCGACAGATATTTTAACATGTCAAATTTTCTTTCTGCTCATTTAATGTTCTTTTCCCTTGCAGAATATACTTCAGAGAATCCCAAGATAGTGACAAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGTATGGTTCCTTTCCTCCGTCGTATCATGCAAACTTGTTCAATCACTATCTCAAAGCAGCCCTATTGGTTGTGTTATAGTGTCTGACTCAGATTGGTGTTTGGATCTTTTTAAGTTTTGGAAGTTATGAAATTTAAGGTTTTTCATAAAATTTGTGTTCCTTTTATTTATAAAATTAGTATGACTTTATGATTTCACACTTATGATTTTAAGCAAAGATAACTGTTATTTATATACGGATCGGGCATAAGGACCTTTTTTTTAGTGAGAATCTTCACTTCATTGATTAGATGAAATTACAAAAGAGGCACAGAGGCCCATATGATTCAGAGAAAATATTGGCAATGAGCAGAGAGAGAAGTAAGGCTATAGTCCCAAAAAAGTGGGGAAATTTACCCCAAGTGAGAGCAATGTAAGTAAGGTGTTATAAAAAAGAGTCAAAATCAATAGCTTTTTCCTCGAAGATGTGTTGGGTCTGCTCGAGCCATGTTAACCAAAGGAAGGCTTTGTTGAAGAGACCTATATGACCTCCTTTTCTTTGCTGAAGGGGTGGCCCATGAAGAGCACCGCTAAAAGAGTCTAGAATCATCACGGTCCTTTTGGAATAACATAGATCCTTTAATATGATCCATTTATTTATGTCTGGAGCTGTTAGATTAAGTTATGTTAGAATATCTCATACCATAAAACTTCTAAGGACACATCATCTTTTCTTGTCCTTCATCTCCTTAGAATGGGATAAGTCTGATCTCATTTTTCTTGTTTTTGTTGAAAACCTGATATTGGGGGCCCCACCCCACGAATCCAGGGGAAGCTACACTCGCCCTTAGATTCAGACCCAGGAGACACCATGGAAGGACTTTTATATCTGAAGGTTCAAACGCTTGTCTTCTGGGTAGGTGTTATCAAGAGACTGCATGCCTTTGCCAACAAGGTGCCCTTTGGGGGCTAGTTGATCTCATTTTGATATCAATATTTATGCTTTTTAGAATAAGATGGCACATTAACGTGGTAATGTTTGAAATTTTATATGGTTAAACTAATAAATAATATAACACTGCACCATTTTGTGATATTCAGTTGGTAGGGTTGTGCATCAGTAATTTTTGGTATAATAACTAATGTTCCTTCCCCATCTCCTTCACTGGTGAAGCTTTGGGAAATAACCTTCAGATGAAACATGATCCTTAGATGCCCTTCTACGTTTAAAATGGCGGGTTATCTTGCATAGTATAAAATTATTCCTTACGGATGGTATTCTAGTGATTCCAAATCATGTTAGAGGTGGAATTAGCTTGTAAGTTTGTTGCTTAACTAAAATAGTACCAGCAATAATCGATTAAGATCGCATGGTACAACTGGCAATTTTATTCAAAAAGGAAAAGTGGCTTTGCCTGTGTATAAATTTGGTGTAGAGTGAATAGTCTGTAAACTGTTATGCAACCCATTATTTACTTATGATGGTACCTTGAAGAACTCCGCCTGATCCATGTAGTATGAAACTTATGGCTGTCACTTGGCTATGATATTCGACGGTAGGAAAACCAGTGGAATGATTTAGATACAATTTGTCTTTTTTTAAAATGTTTTACAGTGTACAGATAGTTTTTACTGTGAATATGATTTTCAACTGAATCTGAACTGATTTGTAAATTGTAGACAAATTTTAAATAGGAGGAAAGCTATTGTCTAAAAACCCCATATTACTTGTCATATTATTGGGGTTCTTTCTCCTTAAACAGGCCTGTGACCTAG

mRNA sequence

AAAAAAAAAGAAAAGAAAAACAAAACAAAACAAAATAGAAACAGTTGGATCTAAAATGGTTTGGCTTCTCATTTTACTTCTTCTCAATTTGAGTTTCTTTGATCTTTCTGAGGCTAGGCATCACAGGAAGCTCCCTTCGGCCGTCGTTGTCGGTACCGTCTTCTGCGACACATGCTTTCAAGAGAAATTTTCCAAGACCAGTCACTTCATTTCAGTGGCTGCAACAGCAAAATCATCTTCCCTTCAACTCAAGTCAAAAAAACAAGGCGCACACACATTCTCAGCTGGCTTCTTCACTTTCAAGCCTCTAAAACAACCAAACCTTTGCAACCAAAAGCCTCAATATTCCAACACATTTGATGACATGAAACAAGTCCTCCCCGCGCCCCCACCGTTCGACTTCCCGAGCTTGCCATCTCCTATCCAAAACCCGTCCGTGCCGAACGTTCCTCGGATTTACGATAACCTTCCTCCTCTCCCATTGCTTCCTGGCCTTCTTCCATTGCCTCCATTGCCTCCATTGCCACCACTCCCTCCTCTTCCACCTCTCCCTGGCTTTCCACTGTTCCCACCAAAAAAGAATGATGAAAATAATGTACCAAATGAAATTCCAAACACAAGTGCAAAACAACATCAGTTTCATCCACAGACTTTGCTTCCAATGCCACCCATTAAGCCTTTGAAAAGGCCACATTTTTTTGGTCTGCCTCCACACAGGCTGCACCACCACTACCCTCTCTTGCCTCCATTCTCAACTCATACGGCAGCTGCAGCGGGGGCCGGTTTCTCTGTCCTCCACCCACCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCTTCTCCCTCCACTTTACTCCTCTCTCAAGCTTGGTTTGCTATTGATATCTTTATGGCATCTCTTTTTCTCATCACCGAAGGAAAGAATCCGGTGTTTTCAGAGGTGATGACATTAGCATTCATCACAGTTGCTTTGAGGATAATCCCTTTGGATCCCCATGTCTTTAACCTTACTGAACATAGGCTGCTAATTTTACAGGAGTTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTTGAAGACTATGTTAATCCTAATAGTTCAGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGTTTCTTAAATGCATACACATTGATTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACATCCATGAATTCCACAGCATCGACAGATAACTCTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGATCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAAGAGTCAGAACCTTTAAGAAGTGATGTGGATACCGATTCAGATTCTTTGGGCTCAGCAGGCAAATGGAATGGTTCTGCTTGTCTTGAGGAATCTAAAGAAAACCTTGGCAAATCATCTCTAAAGTTCCCTTCAACTAAATCTACCACTGGACTTGGGTATTCTTATACATCCTCCGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGAATATACTTCAGAGAATCCCAAGATAGTGACAAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGGGAAGCTACACTCGCCCTTAGATTCAGACCCAGGAGACACCATGGAAGGACTTTTATATCTGAAGGTTCAAACGCTTGTCTTCTGGGTAGTGATTCCAAATCATGTTAGAGGTGGAATTAGCTTGCCTGTGACCTAG

Coding sequence (CDS)

ATGGTTTGGCTTCTCATTTTACTTCTTCTCAATTTGAGTTTCTTTGATCTTTCTGAGGCTAGGCATCACAGGAAGCTCCCTTCGGCCGTCGTTGTCGGTACCGTCTTCTGCGACACATGCTTTCAAGAGAAATTTTCCAAGACCAGTCACTTCATTTCAGTGGCTGCAACAGCAAAATCATCTTCCCTTCAACTCAAGTCAAAAAAACAAGGCGCACACACATTCTCAGCTGGCTTCTTCACTTTCAAGCCTCTAAAACAACCAAACCTTTGCAACCAAAAGCCTCAATATTCCAACACATTTGATGACATGAAACAAGTCCTCCCCGCGCCCCCACCGTTCGACTTCCCGAGCTTGCCATCTCCTATCCAAAACCCGTCCGTGCCGAACGTTCCTCGGATTTACGATAACCTTCCTCCTCTCCCATTGCTTCCTGGCCTTCTTCCATTGCCTCCATTGCCTCCATTGCCACCACTCCCTCCTCTTCCACCTCTCCCTGGCTTTCCACTGTTCCCACCAAAAAAGAATGATGAAAATAATGTACCAAATGAAATTCCAAACACAAGTGCAAAACAACATCAGTTTCATCCACAGACTTTGCTTCCAATGCCACCCATTAAGCCTTTGAAAAGGCCACATTTTTTTGGTCTGCCTCCACACAGGCTGCACCACCACTACCCTCTCTTGCCTCCATTCTCAACTCATACGGCAGCTGCAGCGGGGGCCGGTTTCTCTGTCCTCCACCCACCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCTTCTCCCTCCACTTTACTCCTCTCTCAAGCTTGGTTTGCTATTGATATCTTTATGGCATCTCTTTTTCTCATCACCGAAGGAAAGAATCCGGTGTTTTCAGAGGTGATGACATTAGCATTCATCACAGTTGCTTTGAGGATAATCCCTTTGGATCCCCATGTCTTTAACCTTACTGAACATAGGCTGCTAATTTTACAGGAGTTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTTGAAGACTATGTTAATCCTAATAGTTCAGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGTTTCTTAAATGCATACACATTGATTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACATCCATGAATTCCACAGCATCGACAGATAACTCTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGATCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAAGAGTCAGAACCTTTAAGAAGTGATGTGGATACCGATTCAGATTCTTTGGGCTCAGCAGGCAAATGGAATGGTTCTGCTTGTCTTGAGGAATCTAAAGAAAACCTTGGCAAATCATCTCTAAAGTTCCCTTCAACTAAATCTACCACTGGACTTGGGTATTCTTATACATCCTCCGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGAATATACTTCAGAGAATCCCAAGATAGTGACAAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGGGAAGCTACACTCGCCCTTAGATTCAGACCCAGGAGACACCATGGAAGGACTTTTATATCTGAAGGTTCAAACGCTTGTCTTCTGGGTAGTGATTCCAAATCATGTTAGAGGTGGAATTAGCTTGCCTGTGACCTAG

Protein sequence

MVWLLILLLLNLSFFDLSEARHHRKLPSAVVVGTVFCDTCFQEKFSKTSHFISVAATAKSSSLQLKSKKQGAHTFSAGFFTFKPLKQPNLCNQKPQYSNTFDDMKQVLPAPPPFDFPSLPSPIQNPSVPNVPRIYDNLPPLPLLPGLLPLPPLPPLPPLPPLPPLPGFPLFPPKKNDENNVPNEIPNTSAKQHQFHPQTLLPMPPIKPLKRPHFFGLPPHRLHHHYPLLPPFSTHTAAAAGAGFSVLHPPPKIVFSFGLLFSSPSTLLLSQAWFAIDIFMASLFLITEGKNPVFSEVMTLAFITVALRIIPLDPHVFNLTEHRLLILQEFGTMGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGATSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRSDVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKGKLHSPLDSDPGDTMEGLLYLKVQTLVFWVVIPNHVRGGISLPVT

Homology

[Close]

BLAST of CmUC11G208680 vs. NCBI nr
Match: XP_008459404.1 (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 4.5e-122
Identity = 216/219 (98.63%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           +VDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKST+GLGY+YTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. NCBI nr
Match: XP_038889911.1 (E3 ubiquitin-protein ligase At3g02290 [Benincasa hispida])

HSP 1 Score: 449.1 bits (1154), Expect = 5.8e-122
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFL+AYTLIFRRGEVHSVSSSIQG 
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLSAYTLIFRRGEVHSVSSSIQGT 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGY+YTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. NCBI nr
Match: XP_004141476.1 (E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus] >KGN52530.1 hypothetical protein Csa_009250 [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 5.5e-120
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           +VDTDSDSLGS GK NGSACLEESKENLGKSSLKFPSTKST+GLGY+YTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. NCBI nr
Match: KAG7016095.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437.2 bits (1123), Expect = 2.3e-118
Identity = 210/222 (94.59%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           DVDTDSDSLGS+GKWNGSACLEESKE LGKSSLKFPSTKSTTG+GY+YTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKGKL 555
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK +L
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVRL 222

[Close]

BLAST of CmUC11G208680 vs. NCBI nr
Match: KAG6578535.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.0 bits (1120), Expect = 5.1e-118
Identity = 209/219 (95.43%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           DVDTDSDSLGS+GKWNGSACLEESKE LGKSSLKFPSTKSTTG+GY+YTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-71
Identity = 142/227 (62.56%), Postives = 165/227 (72.69%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MG V  C  VED ++Y+NPNSSVYRNC C+ C   +FLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
            S+ S++S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLRS
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 453 DVDTDSDSLGSAG-KW-NGSACL--EESKENL-GKSSLKFPSTKSTTGLGYS---YTSSE 512
           D D DS+S G  G KW N  + L  ++SKE    KSSL+   ++S + +  S   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 513 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGK
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGK 223

[Close]

BLAST of CmUC11G208680 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.2e-13
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 456 TDSDSLGSAGKWNGSAC-LEESKENLGKSSLKFPSTK---------STTGLGYSYTSSED 515
           TDS+S+   G+ +GS+     + E+LG+S  K  ++           +   G      E+
Sbjct: 78  TDSESI--KGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEE 137

Query: 516 EDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           ED CP C E+Y  ENP++ TKC H FHL C+ EW+ERSD CP+C K
Sbjct: 138 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181

[Close]

BLAST of CmUC11G208680 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.6e-13
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 507 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           D CP CLEEY  +NPK++TKC H FHL CI  WMERS+ CPVC K
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDK 146

[Close]

BLAST of CmUC11G208680 vs. ExPASy TrEMBL
Match: A0A1S3CA28 (E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 2.2e-122
Identity = 216/219 (98.63%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           +VDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKST+GLGY+YTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. ExPASy TrEMBL
Match: A0A0A0KSH8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 2.6e-120
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           +VDTDSDSLGS GK NGSACLEESKENLGKSSLKFPSTKST+GLGY+YTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. ExPASy TrEMBL
Match: A0A6J1JX28 (E3 ubiquitin-protein ligase At3g02290-like OS=Cucurbita maxima OX=3661 GN=LOC111489111 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 208/219 (94.98%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           DVDTDSDSLGS+GKWNGSACLEESKE LGKSSLKFPSTKSTT +GY+YTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTDVGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. ExPASy TrEMBL
Match: A0A6J1BYQ7 (E3 ubiquitin-protein ligase At3g02290 OS=Momordica charantia OX=3673 GN=LOC111006466 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 205/219 (93.61%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVED+EDYVNPNSS+YRNCTCLSCFIQ+FLNAYTLIFRRGEVHSVSSSIQG 
Sbjct: 1   MGAVCCCLSVEDYEDYVNPNSSLYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGT 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           +VD DSDSL + GKWNGSACL+ESKENLGKSSLKFPSTKSTTG+GY+YTSSEDEDVCPTC
Sbjct: 121 EVDADSDSLDTPGKWNGSACLDESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKI+T+CSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIMTQCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. ExPASy TrEMBL
Match: A0A6J1FHB6 (E3 ubiquitin-protein ligase At3g02290-like OS=Cucurbita moschata OX=3662 GN=LOC111445459 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 208/219 (94.98%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120

Query: 453 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDEDVCPTC 512
           DVDTDSDSLGS+GKWNGSACLEESKE LGKSSLKFPSTKSTT +GY+YTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTDVGYAYTSSEDEDVCPTC 180

Query: 513 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmUC11G208680 vs. TAIR 10
Match: AT3G02290.1 (RING/U-box superfamily protein )

HSP 1 Score: 272.3 bits (695), Expect = 9.1e-73
Identity = 142/227 (62.56%), Postives = 165/227 (72.69%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MG V  C  VED ++Y+NPNSSVYRNC C+ C   +FLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 393 TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 452
            S+ S++S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLRS
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 453 DVDTDSDSLGSAG-KW-NGSACL--EESKENL-GKSSLKFPSTKSTTGLGYS---YTSSE 512
           D D DS+S G  G KW N  + L  ++SKE    KSSL+   ++S + +  S   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 513 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGK
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGK 223

[Close]

BLAST of CmUC11G208680 vs. TAIR 10
Match: AT5G38895.3 (RING/U-box superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 8.5e-71
Identity = 126/224 (56.25%), Postives = 157/224 (70.09%), Query Frame = 0


Query: 329 EFGTMGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSS 388
           +F  MGA CCC  V+ FE YVNPN+S+ RNC CL+CF+QSF++ Y  +F RG +H + S+
Sbjct: 102 DFEDMGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPST 161

Query: 389 IQGATSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESE 448
           ++ AT MNST + D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESE
Sbjct: 162 VETATVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESE 221

Query: 449 PLRSDVDTDSDSLGSAG-KWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDED 508
           PLR D +  S++LG  G KW+ S   + SKE   K S  F  +K+  G+   Y  S+DED
Sbjct: 222 PLRGDTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDED 281

Query: 509 VCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           +CPTCL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGK
Sbjct: 282 ICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGK 316

[Close]

BLAST of CmUC11G208680 vs. TAIR 10
Match: AT5G38895.2 (RING/U-box superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 8.5e-71
Identity = 126/224 (56.25%), Postives = 157/224 (70.09%), Query Frame = 0


Query: 329 EFGTMGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSS 388
           +F  MGA CCC  V+ FE YVNPN+S+ RNC CL+CF+QSF++ Y  +F RG +H + S+
Sbjct: 72  DFEDMGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPST 131

Query: 389 IQGATSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESE 448
           ++ AT MNST + D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESE
Sbjct: 132 VETATVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESE 191

Query: 449 PLRSDVDTDSDSLGSAG-KWNGSACLEESKENLGKSSLKFPSTKSTTGLGYSYTSSEDED 508
           PLR D +  S++LG  G KW+ S   + SKE   K S  F  +K+  G+   Y  S+DED
Sbjct: 192 PLRGDTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDED 251

Query: 509 VCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           +CPTCL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGK
Sbjct: 252 ICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGK 286

[Close]

BLAST of CmUC11G208680 vs. TAIR 10
Match: AT5G15790.1 (RING/U-box superfamily protein )

HSP 1 Score: 264.2 bits (674), Expect = 2.5e-70
Identity = 134/225 (59.56%), Postives = 160/225 (71.11%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MG V  C  V+DFEDY NP+SSV R+C C  C + +FLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQAT 60

Query: 393 -TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 452
             S+ ++ S DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPLR
Sbjct: 61  NVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLR 120

Query: 453 SDVDTDSDSLGSAG-KWNGSACL--EESKENLGKSSLKF--PSTKSTTGLGYSYTSSEDE 512
           SD D DS+S    G KW     +  E+SKE   +SS +     T ST+  G  Y +S+DE
Sbjct: 121 SDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEGL-YITSDDE 180

Query: 513 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           DVCPTCLEEY SENPKIVTKCSHHFHL CIYEWMERS+NCPVCGK
Sbjct: 181 DVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGK 224

[Close]

BLAST of CmUC11G208680 vs. TAIR 10
Match: AT5G15790.2 (RING/U-box superfamily protein )

HSP 1 Score: 264.2 bits (674), Expect = 2.5e-70
Identity = 134/225 (59.56%), Postives = 160/225 (71.11%), Query Frame = 0


Query: 333 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 392
           MG V  C  V+DFEDY NP+SSV R+C C  C + +FLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQAT 60

Query: 393 -TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 452
             S+ ++ S DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPLR
Sbjct: 61  NVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLR 120

Query: 453 SDVDTDSDSLGSAG-KWNGSACL--EESKENLGKSSLKF--PSTKSTTGLGYSYTSSEDE 512
           SD D DS+S    G KW     +  E+SKE   +SS +     T ST+  G  Y +S+DE
Sbjct: 121 SDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEGL-YITSDDE 180

Query: 513 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 552
           DVCPTCLEEY SENPKIVTKCSHHFHL CIYEWMERS+NCPVCGK
Sbjct: 181 DVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGK 224

The following BLAST results are available for this feature:

BLAST of CmUC11G208680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459404.1	4.5e-122	98.63	PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo]	[more]
XP_038889911.1	5.8e-122	98.63	E3 ubiquitin-protein ligase At3g02290 [Benincasa hispida]	[more]
XP_004141476.1	5.5e-120	97.72	E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus] >KGN52530.1 hypothetical...	[more]
KAG7016095.1	2.3e-118	94.59	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6578535.1	5.1e-118	95.43	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmUC11G208680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LE94	1.3e-71	62.56	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q2HIJ8	1.2e-13	39.62	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q93ZF6	4.6e-13	66.67	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]

BLAST of CmUC11G208680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CA28	2.2e-122	98.63	E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE...	[more]
A0A0A0KSH8	2.6e-120	97.72	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 P...	[more]
A0A6J1JX28	1.6e-117	94.98	E3 ubiquitin-protein ligase At3g02290-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1BYQ7	1.6e-117	93.61	E3 ubiquitin-protein ligase At3g02290 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1FHB6	1.6e-117	94.98	E3 ubiquitin-protein ligase At3g02290-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CmUC11G208680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02290.1	9.1e-73	62.56	RING/U-box superfamily protein	[more]
AT5G38895.3	8.5e-71	56.25	RING/U-box superfamily protein	[more]
AT5G38895.2	8.5e-71	56.25	RING/U-box superfamily protein	[more]
AT5G15790.1	2.5e-70	59.56	RING/U-box superfamily protein	[more]
AT5G15790.2	2.5e-70	59.56	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 509..549 e-value: 1.4E-6 score: 37.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 508..549 e-value: 1.7E-10 score: 41.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 509..549 score: 12.002429
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 489..553 e-value: 7.1E-15 score: 56.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..455
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..421
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..461
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..408
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 333..551
None	No IPR available	PANTHER	PTHR46463:SF43	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 333..551
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 503..551

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G208680.1	CmUC11G208680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding