Homology
BLAST of Sed0009503 vs. NCBI nr
Match:
XP_023004999.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita maxima])
HSP 1 Score: 789.6 bits (2038), Expect = 1.5e-224
Identity = 411/524 (78.44%), Postives = 448/524 (85.50%), Query Frame = 0
Query: 1 MSVWMETTVLHRYVDIASKWPFRLRF-----PSSSSNFFFLNK---------------TK 60
MSV MET VLH D PFRLRF SSSS+ F LNK TK
Sbjct: 1 MSVPMETCVLHCCYD-----PFRLRFKHSSSSSSSSHPFDLNKGSSCLYSRIPLPEPYTK 60
Query: 61 PLPSLTTCAVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTEL 120
L SL T AV TH+PTKHATLLVD+FH+HHTLKAL+ DL KR SCPLLLLKHHGDW+ +
Sbjct: 61 LLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLKHHGDWNRDH 120
Query: 121 FWVVVEFLREDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDM 180
FW+VV+FLR SRS ILKLFD WKSIE SR NESNYEK+IVLLSQDGLMEDAVSAFQDM
Sbjct: 121 FWLVVKFLRNASRSHEILKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSAFQDM 180
Query: 181 KSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMY 240
KSIGLRPSLG YN LIHGFA RGKFE AMLF +EMKEI+M+R+ADTYDGLIEAYGKYRMY
Sbjct: 181 KSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMIREADTYDGLIEAYGKYRMY 240
Query: 241 DEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAM 300
DEM+ECLK+M+LDGC+PD ITYNLLIREFSKGGLLKKMEGLY++ LSKRM+LQSSTLVAM
Sbjct: 241 DEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAM 300
Query: 301 LEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAG 360
LEAYAKFGILDKMEMFYRRIL+SKT M+EDLIR LALVYIQNHMYSR+ETLG+DL+ KAG
Sbjct: 301 LEAYAKFGILDKMEMFYRRILDSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAG 360
Query: 361 KTDLVWCLRLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRAL 420
KTDLVWCL LLS+ACLSSR+GMDSVV+EMDK NE WNVTVANI LLAYL+MKDFKRLR L
Sbjct: 361 KTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANETWNVTVANILLLAYLRMKDFKRLRTL 420
Query: 421 FSEIRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGK 480
FSEIRARRVKPDIVTIGILLDANN+ FDGT+ILEAWRRMNLLSRA E+ TDSLVLAAFGK
Sbjct: 421 FSEIRARRVKPDIVTIGILLDANNKSFDGTRILEAWRRMNLLSRAVEINTDSLVLAAFGK 480
Query: 481 GNFLQNCEQAYVSLEPMDRENRVWTYEELIDLVVEKQRGTGLKT 505
G FL++CE+AY SLE M REN+VWTYEELIDLV E Q G GLKT
Sbjct: 481 GRFLKDCEEAYASLELMGRENKVWTYEELIDLVCENQGGMGLKT 519
BLAST of Sed0009503 vs. NCBI nr
Match:
XP_022959989.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita moschata])
HSP 1 Score: 774.6 bits (1999), Expect = 5.1e-220
Identity = 403/521 (77.35%), Postives = 442/521 (84.84%), Query Frame = 0
Query: 1 MSVWMETTVLHRYVDIASKWPFRLR--FPSSSSNFFFLNK---------------TKPLP 60
MSV MET VLH D PFRLR PSSS + F LNK TK L
Sbjct: 1 MSVPMETCVLHCCYD-----PFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLL 60
Query: 61 SLTTCAVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFWV 120
SL T AV TH+PTKHATLLVD+FH+H TLKAL+ DL KR SCPLLLL+ HGDW+ + FW+
Sbjct: 61 SLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWL 120
Query: 121 VVEFLREDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDMKSI 180
VV+FLR SRS +LKLFD WKSIE SR NESNYEK+IVLLSQDGLMEDAVS+FQDMKSI
Sbjct: 121 VVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSI 180
Query: 181 GLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDEM 240
GLRPSLG YN LIHGFA RGKFE AMLF +EMKEI+M R+ADTYDGLIEAYGKYRMYDEM
Sbjct: 181 GLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEM 240
Query: 241 VECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLEA 300
+ECLK+M+LDGC PD ITYNLLIREFSKGGLLKKMEGLY++ LSKRM+LQSSTLVAMLEA
Sbjct: 241 IECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEA 300
Query: 301 YAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAGKTD 360
YAKFGILDKMEMFYRRILNSKT M+EDLIR LALVYIQNHMYSR+ETLG+DL+ KAGKTD
Sbjct: 301 YAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTD 360
Query: 361 LVWCLRLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFSE 420
LVWCL LLS+ACLSSR+GMDSVV+EMDK NEIWN TVANI LLAYLKMKDFKRLR LFSE
Sbjct: 361 LVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSE 420
Query: 421 IRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGNF 480
IRAR VKPDIVTIGILLDANN+ FDGT+ILEAWR+MNLLSRA E+ TDSLVLAAFGKG F
Sbjct: 421 IRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRF 480
Query: 481 LQNCEQAYVSLEPMDRENRVWTYEELIDLVVEKQRGTGLKT 505
L++CE+AY SLE + RE++VWTYEELIDLV E Q G GLKT
Sbjct: 481 LKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKT 516
BLAST of Sed0009503 vs. NCBI nr
Match:
XP_023514113.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 773.5 bits (1996), Expect = 1.1e-219
Identity = 401/521 (76.97%), Postives = 442/521 (84.84%), Query Frame = 0
Query: 1 MSVWMETTVLHRYVDIASKWPFRLR--FPSSSSNFFFLNK---------------TKPLP 60
MSV MET VLH D PFRLR PSSS + F LNK TK L
Sbjct: 1 MSVPMETCVLHCCYD-----PFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLL 60
Query: 61 SLTTCAVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFWV 120
SL T AV TH+PTKHATLLVD+FH+HHTLKAL+ DL KR SCPLLLL+HHGDW+ + FW+
Sbjct: 61 SLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLRHHGDWNRDHFWL 120
Query: 121 VVEFLREDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDMKSI 180
VV+FLR SRS ILKLFD WKSIE SR +ESNYEK+IVLLSQDGLMEDAVSAFQDMKS+
Sbjct: 121 VVKFLRNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSL 180
Query: 181 GLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDEM 240
GLRPSLG YN LIHGFA RGKFE AMLF +EMKEI+M R+ DTYDGLIEAYGKYRMYDEM
Sbjct: 181 GLRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEM 240
Query: 241 VECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLEA 300
+ECLK+M+LDGC+PD ITYNLLIREFSKGGLLKKMEGLY++ LSKRM+LQSSTLVAMLEA
Sbjct: 241 IECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEA 300
Query: 301 YAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAGKTD 360
YAKFGILDKMEMFYRRILNSKT M+EDLIR LALVYIQNHMYSR+ETLG+DL+ KAGKTD
Sbjct: 301 YAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTD 360
Query: 361 LVWCLRLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFSE 420
LVWCL LLS+ACLSSR+GMDSVV+EMDK EIWNVTVANI LLAYLKMKDFKRLR LFSE
Sbjct: 361 LVWCLLLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSE 420
Query: 421 IRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGNF 480
IRAR VKPD+VTIGILLDANN+ FDGT+ LEAWRRMN+LSRA E+ TDSLVLAAFGKG F
Sbjct: 421 IRARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRF 480
Query: 481 LQNCEQAYVSLEPMDRENRVWTYEELIDLVVEKQRGTGLKT 505
L++CE+AY SLE + RE++VWTYEELIDLV E Q G LKT
Sbjct: 481 LKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMVLKT 516
BLAST of Sed0009503 vs. NCBI nr
Match:
KAG6592896.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 770.8 bits (1989), Expect = 7.4e-219
Identity = 399/516 (77.33%), Postives = 439/516 (85.08%), Query Frame = 0
Query: 5 METTVLHRYVDIASKWPFRLRFP-SSSSNFFFLNK---------------TKPLPSLTTC 64
MET VLH D PFRLR SS + F LNK TK L SL T
Sbjct: 1 METCVLHCCYD-----PFRLRSKHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
Query: 65 AVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFWVVVEFL 124
AV TH+PTKHATLLVD+FH+HHTLKAL+ DL KRGSCPLLLL+ HGDW+ + FW+VV+FL
Sbjct: 61 AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120
Query: 125 REDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPS 184
R SRS +LKLFD WKSIE SR NESNYEK+IVLLSQDGLMEDAVS+FQDMKSIGLRPS
Sbjct: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
Query: 185 LGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDEMVECLK 244
LG YN LIHGFA RGKFE A+LF +EMKEI+M R+ADTYDGLIEAYGKYRMYDEM+ECLK
Sbjct: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
Query: 245 KMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLEAYAKFG 304
+M+LDGC PD ITYNLLIREFSKGGLLKKMEGLY++ LSKRM+LQSSTLVAMLEAYAKFG
Sbjct: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
Query: 305 ILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAGKTDLVWCL 364
ILDKMEMFYRRILNSKT M+EDLIR LALVYIQNHMYSR+ETLG+DL+ KAGKTDLVWCL
Sbjct: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
Query: 365 RLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFSEIRARR 424
LLS+ACLSSR+GMDSVV+EMDK NEIWN TVANI LLAYLKMKDFKRLR LFSEIRAR
Sbjct: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
Query: 425 VKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGNFLQNCE 484
VKPDIVTIGILLDANN+ FDGT+ILEAW+RMNLLSRA E+ TDSLVLAAFGKG FL++CE
Sbjct: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
Query: 485 QAYVSLEPMDRENRVWTYEELIDLVVEKQRGTGLKT 505
+AY SLE + RE++VWTYEELIDLV E Q G GLKT
Sbjct: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKT 511
BLAST of Sed0009503 vs. NCBI nr
Match:
KAG7025298.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 770.0 bits (1987), Expect = 1.3e-218
Identity = 401/521 (76.97%), Postives = 441/521 (84.64%), Query Frame = 0
Query: 5 METTVLHRYVDIASKWPFRLR--FPS----SSSNFFFLNK---------------TKPLP 64
MET VLH D PFRLR PS SS + F LNK TK L
Sbjct: 1 METCVLHCCYD-----PFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLL 60
Query: 65 SLTTCAVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFWV 124
SL T AV TH+PTKHATLLVD+FH+HHTLKAL+ DL KRGSCPLLLL+ HGDW+ + FW+
Sbjct: 61 SLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWL 120
Query: 125 VVEFLREDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDMKSI 184
VV+FLR SRS +LKLFD WKSIE SR NESNYEK+IVLLSQDGLMEDAVS+FQDMKSI
Sbjct: 121 VVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSI 180
Query: 185 GLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDEM 244
GLRPSLG YN LIHGFA RGKFE A+LF +EMKEI+M R+ADTYDGLIEAYGKYRMYDEM
Sbjct: 181 GLRPSLGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEM 240
Query: 245 VECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLEA 304
+ECLK+M+LDGC PD ITYNLLIREFSKGGLLKKMEGLY++ LSKRM+LQSSTLVAMLEA
Sbjct: 241 IECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEA 300
Query: 305 YAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAGKTD 364
YAKFGILDKMEMFYRRILNSKT M+EDLIR LALVYIQNHMYSR+ETLG+DL+ KAGKTD
Sbjct: 301 YAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTD 360
Query: 365 LVWCLRLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFSE 424
LVWCL LLS+ACLSSR+GMDSVV+EMDK NEIWN TVANI LLAYLKMKDFKRLR LFSE
Sbjct: 361 LVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSE 420
Query: 425 IRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGNF 484
IRAR VKPDIVTIGILLDANN+ FDGT+ILEAW+RMNLLSRA E+ TDSLVLAAFGKG F
Sbjct: 421 IRARHVKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRF 480
Query: 485 LQNCEQAYVSLEPMDRENRVWTYEELIDLVVEKQRGTGLKT 505
L++CE+AY SLE + RE++VWTYEELIDLV E Q G GLKT
Sbjct: 481 LKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKT 516
BLAST of Sed0009503 vs. ExPASy Swiss-Prot
Match:
O23278 (Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14190 PE=2 SV=2)
HSP 1 Score: 439.1 bits (1128), Expect = 6.7e-122
Identity = 222/443 (50.11%), Postives = 304/443 (68.62%), Query Frame = 0
Query: 59 ATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFWVVVEFLREDSRSLHIL 118
AT H H L +L L GSCPL LL+ GDW + FW V+ FLR+ SR IL
Sbjct: 56 ATQPTSLLHHHRFLSSLTRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEIL 115
Query: 119 KLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDM-KSIGLRPSLGIYNLLIH 178
+FD WK++E SR +E+NYE++I L ++ M +A+ AF+ M L PSL IYN +IH
Sbjct: 116 PVFDTWKNLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIH 175
Query: 179 GFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYP 238
+A GKFE AM + N MKE ++ +TYDGLIEAYGK++MYDE+V CLK+M+ DGC
Sbjct: 176 SYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVR 235
Query: 239 DKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFY 298
D +TYNLLIREFS+GGLLK+ME +YQ+ +S++M L+ STL++MLEAYA+FG+++KME
Sbjct: 236 DHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETC 295
Query: 299 RRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDL-YDKAGKTDLVWCLRLLSNACL 358
+I+ ++E L+RKLA VYI+N M+SRL+ LG + + +T+L WCLRLL +A L
Sbjct: 296 NKIIRFGISLDEGLVRKLANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRLLCHARL 355
Query: 359 SSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTI 418
SRKG+D VV+EM++ WN T ANI LLAY KM DF + L SE+R + VK D+VT+
Sbjct: 356 VSRKGLDYVVKEMEEARVPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVTV 415
Query: 419 GILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGNFLQNCEQA-YVSLE 478
GI+ D + FDGT + W+++ L + EMKTD LV AAFGKG FL++CE+ SL
Sbjct: 416 GIVFDLSEARFDGTGVFMTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQSLG 475
Query: 479 PMDRENRVWTYEELIDLVVEKQR 499
D E++ WTY+ L++LVV+ Q+
Sbjct: 476 TRDGESKSWTYQYLMELVVKNQK 498
BLAST of Sed0009503 vs. ExPASy Swiss-Prot
Match:
Q9M2A1 (Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX=3702 GN=At3g42630 PE=2 SV=2)
HSP 1 Score: 126.3 bits (316), Expect = 9.6e-28
Identity = 104/363 (28.65%), Postives = 166/363 (45.73%), Query Frame = 0
Query: 136 NYEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEM 195
+Y L+ LSQ L + A F KS+ L P+ L+ FA G A ++E+
Sbjct: 49 DYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEI 108
Query: 196 KEIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLL 255
V D LI AY ++ +DE+ + K + + +L I F K G L
Sbjct: 109 INSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQL 168
Query: 256 KKMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKL 315
+ MEG+ + SK + L++ T ++ Y+ FG LDKME Y R+ ++EE+ IR +
Sbjct: 169 ELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAV 228
Query: 316 ALVYIQNHMYSRLETLGMDL-YDKAGKTDLVWCLRLLSNACLSSRKGMDSVVREMDKGNE 375
L Y++ + RL D+ + +++W LLS A K + M
Sbjct: 229 VLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGF 288
Query: 376 IWNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTIGILLDANNEGFDGTKILE 435
++T NI LA+ +M F L +R + PD+VT G ++DA + +
Sbjct: 289 SPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEF 348
Query: 436 AWRRMNLLSRAAEMKTDSLVLAAFGKGNFLQNCEQAYVSLEPMDRENRVWTYEELIDLVV 495
+ RMN L + + TD L GKG+F + E LE R+N WTY +LI + +
Sbjct: 349 VYNRMN-LDDSPLVLTDPLAFEVLGKGDFHLSSEAV---LEFSPRKN--WTYRKLIGVYL 405
Query: 496 EKQ 498
+K+
Sbjct: 409 KKK 405
BLAST of Sed0009503 vs. ExPASy Swiss-Prot
Match:
P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 5.1e-21
Identity = 90/350 (25.71%), Postives = 153/350 (43.71%), Query Frame = 0
Query: 148 GLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTY 207
G +D F+DM G RP++ YN++I G E A F EMK +V D TY
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 208 DGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALS 267
+ +I+ +GK D+ V ++MK C PD ITYN LI F K G L Y+
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 268 KRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSR 327
++ + +++A+ K G++ + FY + + E L + S
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 328 LETLGMDLYDKAGKTDLVWCLRLLSNACLSSR-KGMDSVVREMDKGNEIWNVTVANITLL 387
LG ++ + ++V L+ C + R K + + +MD I N+ N +
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480
Query: 388 AYLKMKDFKRLRALFSEIRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAA 447
++K K+ R L +E++ R +KPD++ G + G + +EA + + +
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI----WGLCSLEKIEAAKVVMNEMKEC 540
Query: 448 EMKTDSLVL-----AAFGKGNFLQNCEQAYVSLEPMDRENRVWTYEELID 492
+K +SL+ A F GN + ++ +D E V T+ LID
Sbjct: 541 GIKANSLIYTTLMDAYFKSGNPTEGL-HLLDEMKELDIEVTVVTFCVLID 585
BLAST of Sed0009503 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 4.3e-20
Identity = 65/285 (22.81%), Postives = 128/285 (44.91%), Query Frame = 0
Query: 137 YEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMK 196
Y LI ++DG++++A+ M G +P + Y L+ GF GK E+AM F EM+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 197 EIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLLK 256
+ T++ I+ YG + EM++ ++ + G PD +T+N L+ F + G+
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 257 KMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLA 316
++ G+++ + T ++ AY++ G ++ YRR+L++ + +
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 317 LVYIQNHMYSRLETLGMDLYD-KAGKTDLVWCLRLLSNACLSSRKGMDSVVREMDKGNEI 376
+ M+ + E + ++ D + +L +C L + A M S+ E+ G
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 377 WNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTIGILL 421
+ +L K FSE++ R PDI T+ ++
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
BLAST of Sed0009503 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 1.5e-17
Identity = 70/286 (24.48%), Postives = 123/286 (43.01%), Query Frame = 0
Query: 137 YEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMK 196
Y +I L +DG +DA+S F +M+ G++ + Y+ LI G GK+++ EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 197 EIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLLK 256
+++ D T+ LI+ + K E E +M G PD ITYN LI F K L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 257 KMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLA 316
+ ++ +SK E T ++ +Y K +D +R I + I L
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 317 LVYIQNHMYSRLETLGMDLYDKAGKTDLVWCLRLLSNACLSS--RKGMDSVVREMDKGNE 376
L + Q+ + + L ++ + +V LL C + K ++ + +M K
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE-IFEKMQKSRM 487
Query: 377 IWNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTIGILL 421
+ + NI + +LF + + VKPD+VT +++
Sbjct: 488 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
BLAST of Sed0009503 vs. ExPASy TrEMBL
Match:
A0A6J1KXW9 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498121 PE=3 SV=1)
HSP 1 Score: 789.6 bits (2038), Expect = 7.5e-225
Identity = 411/524 (78.44%), Postives = 448/524 (85.50%), Query Frame = 0
Query: 1 MSVWMETTVLHRYVDIASKWPFRLRF-----PSSSSNFFFLNK---------------TK 60
MSV MET VLH D PFRLRF SSSS+ F LNK TK
Sbjct: 1 MSVPMETCVLHCCYD-----PFRLRFKHSSSSSSSSHPFDLNKGSSCLYSRIPLPEPYTK 60
Query: 61 PLPSLTTCAVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTEL 120
L SL T AV TH+PTKHATLLVD+FH+HHTLKAL+ DL KR SCPLLLLKHHGDW+ +
Sbjct: 61 LLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLKHHGDWNRDH 120
Query: 121 FWVVVEFLREDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDM 180
FW+VV+FLR SRS ILKLFD WKSIE SR NESNYEK+IVLLSQDGLMEDAVSAFQDM
Sbjct: 121 FWLVVKFLRNASRSHEILKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSAFQDM 180
Query: 181 KSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMY 240
KSIGLRPSLG YN LIHGFA RGKFE AMLF +EMKEI+M+R+ADTYDGLIEAYGKYRMY
Sbjct: 181 KSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMIREADTYDGLIEAYGKYRMY 240
Query: 241 DEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAM 300
DEM+ECLK+M+LDGC+PD ITYNLLIREFSKGGLLKKMEGLY++ LSKRM+LQSSTLVAM
Sbjct: 241 DEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAM 300
Query: 301 LEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAG 360
LEAYAKFGILDKMEMFYRRIL+SKT M+EDLIR LALVYIQNHMYSR+ETLG+DL+ KAG
Sbjct: 301 LEAYAKFGILDKMEMFYRRILDSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAG 360
Query: 361 KTDLVWCLRLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRAL 420
KTDLVWCL LLS+ACLSSR+GMDSVV+EMDK NE WNVTVANI LLAYL+MKDFKRLR L
Sbjct: 361 KTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANETWNVTVANILLLAYLRMKDFKRLRTL 420
Query: 421 FSEIRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGK 480
FSEIRARRVKPDIVTIGILLDANN+ FDGT+ILEAWRRMNLLSRA E+ TDSLVLAAFGK
Sbjct: 421 FSEIRARRVKPDIVTIGILLDANNKSFDGTRILEAWRRMNLLSRAVEINTDSLVLAAFGK 480
Query: 481 GNFLQNCEQAYVSLEPMDRENRVWTYEELIDLVVEKQRGTGLKT 505
G FL++CE+AY SLE M REN+VWTYEELIDLV E Q G GLKT
Sbjct: 481 GRFLKDCEEAYASLELMGRENKVWTYEELIDLVCENQGGMGLKT 519
BLAST of Sed0009503 vs. ExPASy TrEMBL
Match:
A0A6J1H9M9 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460878 PE=3 SV=1)
HSP 1 Score: 774.6 bits (1999), Expect = 2.5e-220
Identity = 403/521 (77.35%), Postives = 442/521 (84.84%), Query Frame = 0
Query: 1 MSVWMETTVLHRYVDIASKWPFRLR--FPSSSSNFFFLNK---------------TKPLP 60
MSV MET VLH D PFRLR PSSS + F LNK TK L
Sbjct: 1 MSVPMETCVLHCCYD-----PFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLL 60
Query: 61 SLTTCAVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFWV 120
SL T AV TH+PTKHATLLVD+FH+H TLKAL+ DL KR SCPLLLL+ HGDW+ + FW+
Sbjct: 61 SLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWL 120
Query: 121 VVEFLREDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDMKSI 180
VV+FLR SRS +LKLFD WKSIE SR NESNYEK+IVLLSQDGLMEDAVS+FQDMKSI
Sbjct: 121 VVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSI 180
Query: 181 GLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDEM 240
GLRPSLG YN LIHGFA RGKFE AMLF +EMKEI+M R+ADTYDGLIEAYGKYRMYDEM
Sbjct: 181 GLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEM 240
Query: 241 VECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLEA 300
+ECLK+M+LDGC PD ITYNLLIREFSKGGLLKKMEGLY++ LSKRM+LQSSTLVAMLEA
Sbjct: 241 IECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEA 300
Query: 301 YAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAGKTD 360
YAKFGILDKMEMFYRRILNSKT M+EDLIR LALVYIQNHMYSR+ETLG+DL+ KAGKTD
Sbjct: 301 YAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTD 360
Query: 361 LVWCLRLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFSE 420
LVWCL LLS+ACLSSR+GMDSVV+EMDK NEIWN TVANI LLAYLKMKDFKRLR LFSE
Sbjct: 361 LVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSE 420
Query: 421 IRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGNF 480
IRAR VKPDIVTIGILLDANN+ FDGT+ILEAWR+MNLLSRA E+ TDSLVLAAFGKG F
Sbjct: 421 IRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRF 480
Query: 481 LQNCEQAYVSLEPMDRENRVWTYEELIDLVVEKQRGTGLKT 505
L++CE+AY SLE + RE++VWTYEELIDLV E Q G GLKT
Sbjct: 481 LKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKT 516
BLAST of Sed0009503 vs. ExPASy TrEMBL
Match:
A0A6J1DBE2 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018567 PE=3 SV=1)
HSP 1 Score: 769.2 bits (1985), Expect = 1.0e-218
Identity = 394/516 (76.36%), Postives = 441/516 (85.47%), Query Frame = 0
Query: 5 METTVLHRY--VDIASKWPFRLRFP---SSSSNFFFLNKTK----------PLPSLTT-C 64
MET VLH Y + SK FRL+FP SSSS F+LNK + PL SLTT C
Sbjct: 1 METCVLHGYDSIGCGSKLAFRLQFPYYSSSSSYPFYLNKIRCVPSKNPTPQPLLSLTTSC 60
Query: 65 AVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFWVVVEFL 124
AV TH+PTKHATLL+D+FHQHH LK L+ LHK SCPLLLL HHGDW T+ FWVVV+FL
Sbjct: 61 AVPTHSPTKHATLLLDTFHQHHALKTLLSHLHKTDSCPLLLLTHHGDWSTDHFWVVVKFL 120
Query: 125 REDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPS 184
+ SRS +LKLFDAWK+IERSR NESNYEK+IVLLS+DGLM+DA+SAFQDMKSIGL+PS
Sbjct: 121 TQASRSHQLLKLFDAWKNIERSRINESNYEKVIVLLSRDGLMDDAMSAFQDMKSIGLQPS 180
Query: 185 LGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDEMVECLK 244
LGIYN LIHGFA +G+FE AM F NEMK+I+M R+ DTYDGLIEAYGKYRMYDEMV+CLK
Sbjct: 181 LGIYNSLIHGFAAKGEFETAMFFVNEMKDINMTREPDTYDGLIEAYGKYRMYDEMVKCLK 240
Query: 245 KMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLEAYAKFG 304
+M+LDGC+PD+ITYNLLIREFSKGGLLKKMEGLYQT LSKRM+LQSSTLVAMLEAY KFG
Sbjct: 241 QMELDGCFPDQITYNLLIREFSKGGLLKKMEGLYQTMLSKRMDLQSSTLVAMLEAYTKFG 300
Query: 305 ILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAGKTDLVWCL 364
ILDKMEMFYRRILNS+T ++EDLIRKLALV I+N MYSRLETLG+D+Y K GKTDLVWCL
Sbjct: 301 ILDKMEMFYRRILNSRTNLKEDLIRKLALVCIKNFMYSRLETLGVDVYIKIGKTDLVWCL 360
Query: 365 RLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFSEIRARR 424
RLLS+ACLSSR+GMDSVV+EMDK NEIWNVTVANI LLAYLKMKDFKRLR FSE+R R
Sbjct: 361 RLLSHACLSSRRGMDSVVQEMDKANEIWNVTVANIILLAYLKMKDFKRLRMSFSEMRERH 420
Query: 425 VKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGNFLQNCE 484
VKPDIVTIGILLDANN+G +GT LEAWRRMNLLSRA EM TDSLVLAAFGKGNFL+ CE
Sbjct: 421 VKPDIVTIGILLDANNKGLNGTGTLEAWRRMNLLSRAVEMNTDSLVLAAFGKGNFLKKCE 480
Query: 485 QAYVSLEPMDRENRVWTYEELIDLVVEKQRGTGLKT 505
+ Y +LEP DREN++WTYE LIDLV+EK TGLKT
Sbjct: 481 ETYAALEPKDRENKIWTYEGLIDLVLEKGE-TGLKT 515
BLAST of Sed0009503 vs. ExPASy TrEMBL
Match:
A0A5C7IV15 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001518 PE=4 SV=1)
HSP 1 Score: 577.8 bits (1488), Expect = 4.5e-161
Identity = 281/481 (58.42%), Postives = 374/481 (77.75%), Query Frame = 0
Query: 25 RFPSSSSNFFFLNK---TKPLPSLTTCAVQ-------THTPTKHATLLVDSFHQHHTLKA 84
RF S+ ++ F +K TKP+ + ++Q H P+KH TLLV+++H+HHTL+A
Sbjct: 21 RFNSNINDHVFSSKTLITKPIAFSSLSSLQHPSAPPPLHNPSKHTTLLVETYHEHHTLRA 80
Query: 85 LVFDLHKRGSCPLLLLKHHGDWDTELFWVVVEFLREDSRSLHILKLFDAWKSIERSRNNE 144
L+ L SCPLL+L+H GDW + FW V++FL+ SRS IL++FD WK+IE+SR NE
Sbjct: 81 LIQRLQHEHSCPLLILEHDGDWTKDQFWAVIKFLKNASRSTQILQVFDMWKNIEKSRINE 140
Query: 145 SNYEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNE 204
NY+K+IV+L ++GLME+AV++ Q+MK+ GLRP L IYN +IHG++ GKF+ A+LF E
Sbjct: 141 FNYKKIIVVLGEEGLMEEAVNSLQEMKAHGLRPCLQIYNSIIHGYSRNGKFDEALLFLEE 200
Query: 205 MKEIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGL 264
MKEI++ R DTY GLI+AYGK++MYDE+ CLKKMKLDGC PD ITYNLLIREF++GGL
Sbjct: 201 MKEINLARHTDTYGGLIQAYGKHKMYDEISMCLKKMKLDGCSPDYITYNLLIREFARGGL 260
Query: 265 LKKMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRK 324
L++ME L ++ LSKRM LQSSTL AMLE Y KFG+L+KME Y+R+LNSK ++EDLIRK
Sbjct: 261 LERMERLQKSMLSKRMHLQSSTLTAMLEVYMKFGLLEKMEKCYKRLLNSKPPLKEDLIRK 320
Query: 325 LALVYIQNHMYSRLETLGMDLYDKAGKTDLVWCLRLLSNACLSSRKGMDSVVREMDKGNE 384
LA VYIQN+M+SRL+ LG D+ + G+T+LVWCLRLLS+ACL SR+GMDSV++EM++
Sbjct: 321 LAGVYIQNYMFSRLDDLGDDVASRTGRTELVWCLRLLSHACLLSRRGMDSVIQEMEESKV 380
Query: 385 IWNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTIGILLDANNEGFDGTKILE 444
WNV+VANI LLAYLKMKDFK+LR L SE+ RRVKPD+VT+G++ DA+ GF+ T LE
Sbjct: 381 SWNVSVANIILLAYLKMKDFKQLRVLLSELPTRRVKPDLVTVGVVFDASRFGFNETGTLE 440
Query: 445 AWRRMNLLSRAAEMKTDSLVLAAFGKGNFLQNCEQAYVSLEPMDRENRVWTYEELIDLVV 496
W+RM+LL + +M TD LVL A+GKG+FL++CE+ + SLEP RE R WTY+ LIDLV+
Sbjct: 441 RWKRMDLLYESVKMGTDPLVLIAYGKGHFLRDCEEVFTSLEPYAREKRRWTYQNLIDLVM 500
BLAST of Sed0009503 vs. ExPASy TrEMBL
Match:
A0A5B7BLA3 (PPR_long domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_038595 PE=3 SV=1)
HSP 1 Score: 567.4 bits (1461), Expect = 6.0e-158
Identity = 275/456 (60.31%), Postives = 352/456 (77.19%), Query Frame = 0
Query: 43 PSLTTCAVQTHTPTKHATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFW 102
P+L TK TLLV+SFH++ +K L+ L K+ S PL +LK GDW + FW
Sbjct: 74 PALHNANPHNKNSTKQTTLLVESFHENQRIKLLLEKLKKKYSNPLQILKDDGDWTNDQFW 133
Query: 103 VVVEFLREDSRSLHILKLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDMKS 162
+++FL++ SRS +L++FD WK++++ R E NYEK++ LL ++GLMEDAVSAF+ MKS
Sbjct: 134 ALIKFLKQTSRSKEVLQVFDLWKNLKKLRITEFNYEKILGLLVEEGLMEDAVSAFRGMKS 193
Query: 163 IGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDE 222
GLRPSL IYN +IHGFA++G+FE+++ + EM+EI++ D +TYDGLIEAYG Y+MYDE
Sbjct: 194 HGLRPSLEIYNSMIHGFASKGRFEDSLFYLEEMEEINLKPDTETYDGLIEAYGNYKMYDE 253
Query: 223 MVECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLE 282
M +C+KKM+ DGC PD +TYNLLIREFS+ GLLK+ME +YQT LSKRM+LQSSTLVAMLE
Sbjct: 254 MGKCMKKMEYDGCLPDHVTYNLLIREFSRAGLLKRMERVYQTLLSKRMDLQSSTLVAMLE 313
Query: 283 AYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDLYDKAGKT 342
+YA FGILDKME YRR L SKT ++EDLIRKLA VY++NHM+SRL+ LG+DL K G+T
Sbjct: 314 SYANFGILDKMEKVYRRALKSKTPLKEDLIRKLAKVYVENHMFSRLDDLGVDLSSKVGRT 373
Query: 343 DLVWCLRLLSNACLSSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFS 402
DLVWCLR+LSNA L SRKGM+S+V EM+ N WNVTVANI LLAYLKMKD K ++ FS
Sbjct: 374 DLVWCLRMLSNAHLLSRKGMNSIVHEMELENVPWNVTVANIILLAYLKMKDLKHMKVAFS 433
Query: 403 EIRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGN 462
E+ AR VKPDIVT+GIL DA GFDGT L WR+M L A EM TD+LVL AFGKGN
Sbjct: 434 ELPARYVKPDIVTVGILFDACGMGFDGTGALITWRKMGFLDEAVEMNTDALVLTAFGKGN 493
Query: 463 FLQNCEQAYVSLEPMDRENRVWTYEELIDLVVEKQR 499
FL++CE+ + SLEP R+ ++WTY LIDL+ + ++
Sbjct: 494 FLRSCEEMFSSLEPKARQKKIWTYHHLIDLMFKHKK 529
BLAST of Sed0009503 vs. TAIR 10
Match:
AT4G14190.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 439.1 bits (1128), Expect = 4.8e-123
Identity = 222/443 (50.11%), Postives = 304/443 (68.62%), Query Frame = 0
Query: 59 ATLLVDSFHQHHTLKALVFDLHKRGSCPLLLLKHHGDWDTELFWVVVEFLREDSRSLHIL 118
AT H H L +L L GSCPL LL+ GDW + FW V+ FLR+ SR IL
Sbjct: 56 ATQPTSLLHHHRFLSSLTRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEIL 115
Query: 119 KLFDAWKSIERSRNNESNYEKLIVLLSQDGLMEDAVSAFQDM-KSIGLRPSLGIYNLLIH 178
+FD WK++E SR +E+NYE++I L ++ M +A+ AF+ M L PSL IYN +IH
Sbjct: 116 PVFDTWKNLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIH 175
Query: 179 GFATRGKFENAMLFFNEMKEIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYP 238
+A GKFE AM + N MKE ++ +TYDGLIEAYGK++MYDE+V CLK+M+ DGC
Sbjct: 176 SYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVR 235
Query: 239 DKITYNLLIREFSKGGLLKKMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFY 298
D +TYNLLIREFS+GGLLK+ME +YQ+ +S++M L+ STL++MLEAYA+FG+++KME
Sbjct: 236 DHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETC 295
Query: 299 RRILNSKTIMEEDLIRKLALVYIQNHMYSRLETLGMDL-YDKAGKTDLVWCLRLLSNACL 358
+I+ ++E L+RKLA VYI+N M+SRL+ LG + + +T+L WCLRLL +A L
Sbjct: 296 NKIIRFGISLDEGLVRKLANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRLLCHARL 355
Query: 359 SSRKGMDSVVREMDKGNEIWNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTI 418
SRKG+D VV+EM++ WN T ANI LLAY KM DF + L SE+R + VK D+VT+
Sbjct: 356 VSRKGLDYVVKEMEEARVPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVTV 415
Query: 419 GILLDANNEGFDGTKILEAWRRMNLLSRAAEMKTDSLVLAAFGKGNFLQNCEQA-YVSLE 478
GI+ D + FDGT + W+++ L + EMKTD LV AAFGKG FL++CE+ SL
Sbjct: 416 GIVFDLSEARFDGTGVFMTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQSLG 475
Query: 479 PMDRENRVWTYEELIDLVVEKQR 499
D E++ WTY+ L++LVV+ Q+
Sbjct: 476 TRDGESKSWTYQYLMELVVKNQK 498
BLAST of Sed0009503 vs. TAIR 10
Match:
AT3G42630.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 126.3 bits (316), Expect = 6.8e-29
Identity = 104/363 (28.65%), Postives = 166/363 (45.73%), Query Frame = 0
Query: 136 NYEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEM 195
+Y L+ LSQ L + A F KS+ L P+ L+ FA G A ++E+
Sbjct: 49 DYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEI 108
Query: 196 KEIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLL 255
V D LI AY ++ +DE+ + K + + +L I F K G L
Sbjct: 109 INSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQL 168
Query: 256 KKMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKL 315
+ MEG+ + SK + L++ T ++ Y+ FG LDKME Y R+ ++EE+ IR +
Sbjct: 169 ELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAV 228
Query: 316 ALVYIQNHMYSRLETLGMDL-YDKAGKTDLVWCLRLLSNACLSSRKGMDSVVREMDKGNE 375
L Y++ + RL D+ + +++W LLS A K + M
Sbjct: 229 VLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGF 288
Query: 376 IWNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTIGILLDANNEGFDGTKILE 435
++T NI LA+ +M F L +R + PD+VT G ++DA + +
Sbjct: 289 SPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEF 348
Query: 436 AWRRMNLLSRAAEMKTDSLVLAAFGKGNFLQNCEQAYVSLEPMDRENRVWTYEELIDLVV 495
+ RMN L + + TD L GKG+F + E LE R+N WTY +LI + +
Sbjct: 349 VYNRMN-LDDSPLVLTDPLAFEVLGKGDFHLSSEAV---LEFSPRKN--WTYRKLIGVYL 405
Query: 496 EKQ 498
+K+
Sbjct: 409 KKK 405
BLAST of Sed0009503 vs. TAIR 10
Match:
AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 104.0 bits (258), Expect = 3.6e-22
Identity = 90/350 (25.71%), Postives = 153/350 (43.71%), Query Frame = 0
Query: 148 GLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMKEIDMVRDADTY 207
G +D F+DM G RP++ YN++I G E A F EMK +V D TY
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 208 DGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLLKKMEGLYQTALS 267
+ +I+ +GK D+ V ++MK C PD ITYN LI F K G L Y+
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 268 KRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLALVYIQNHMYSR 327
++ + +++A+ K G++ + FY + + E L + S
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 328 LETLGMDLYDKAGKTDLVWCLRLLSNACLSSR-KGMDSVVREMDKGNEIWNVTVANITLL 387
LG ++ + ++V L+ C + R K + + +MD I N+ N +
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480
Query: 388 AYLKMKDFKRLRALFSEIRARRVKPDIVTIGILLDANNEGFDGTKILEAWRRMNLLSRAA 447
++K K+ R L +E++ R +KPD++ G + G + +EA + + +
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI----WGLCSLEKIEAAKVVMNEMKEC 540
Query: 448 EMKTDSLVL-----AAFGKGNFLQNCEQAYVSLEPMDRENRVWTYEELID 492
+K +SL+ A F GN + ++ +D E V T+ LID
Sbjct: 541 GIKANSLIYTTLMDAYFKSGNPTEGL-HLLDEMKELDIEVTVVTFCVLID 585
BLAST of Sed0009503 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 100.9 bits (250), Expect = 3.1e-21
Identity = 65/285 (22.81%), Postives = 128/285 (44.91%), Query Frame = 0
Query: 137 YEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMK 196
Y LI ++DG++++A+ M G +P + Y L+ GF GK E+AM F EM+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 197 EIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLLK 256
+ T++ I+ YG + EM++ ++ + G PD +T+N L+ F + G+
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 257 KMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLA 316
++ G+++ + T ++ AY++ G ++ YRR+L++ + +
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 317 LVYIQNHMYSRLETLGMDLYD-KAGKTDLVWCLRLLSNACLSSRKGMDSVVREMDKGNEI 376
+ M+ + E + ++ D + +L +C L + A M S+ E+ G
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 377 WNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTIGILL 421
+ +L K FSE++ R PDI T+ ++
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
BLAST of Sed0009503 vs. TAIR 10
Match:
AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 92.4 bits (228), Expect = 1.1e-18
Identity = 70/286 (24.48%), Postives = 123/286 (43.01%), Query Frame = 0
Query: 137 YEKLIVLLSQDGLMEDAVSAFQDMKSIGLRPSLGIYNLLIHGFATRGKFENAMLFFNEMK 196
Y +I L +DG +DA+S F +M+ G++ + Y+ LI G GK+++ EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 197 EIDMVRDADTYDGLIEAYGKYRMYDEMVECLKKMKLDGCYPDKITYNLLIREFSKGGLLK 256
+++ D T+ LI+ + K E E +M G PD ITYN LI F K L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 257 KMEGLYQTALSKRMELQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTIMEEDLIRKLA 316
+ ++ +SK E T ++ +Y K +D +R I + I L
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 317 LVYIQNHMYSRLETLGMDLYDKAGKTDLVWCLRLLSNACLSS--RKGMDSVVREMDKGNE 376
L + Q+ + + L ++ + +V LL C + K ++ + +M K
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE-IFEKMQKSRM 487
Query: 377 IWNVTVANITLLAYLKMKDFKRLRALFSEIRARRVKPDIVTIGILL 421
+ + NI + +LF + + VKPD+VT +++
Sbjct: 488 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023004999.1 | 1.5e-224 | 78.44 | pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... | [more] |
XP_022959989.1 | 5.1e-220 | 77.35 | pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... | [more] |
XP_023514113.1 | 1.1e-219 | 76.97 | pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... | [more] |
KAG6592896.1 | 7.4e-219 | 77.33 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG7025298.1 | 1.3e-218 | 76.97 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
O23278 | 6.7e-122 | 50.11 | Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidop... | [more] |
Q9M2A1 | 9.6e-28 | 28.65 | Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX... | [more] |
P0C894 | 5.1e-21 | 25.71 | Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... | [more] |
Q9LYZ9 | 4.3e-20 | 22.81 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q6NQ83 | 1.5e-17 | 24.48 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KXW9 | 7.5e-225 | 78.44 | pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbit... | [more] |
A0A6J1H9M9 | 2.5e-220 | 77.35 | pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbit... | [more] |
A0A6J1DBE2 | 1.0e-218 | 76.36 | pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Momordic... | [more] |
A0A5C7IV15 | 4.5e-161 | 58.42 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001518 PE=4 SV=1 | [more] |
A0A5B7BLA3 | 6.0e-158 | 60.31 | PPR_long domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT4G14190.1 | 4.8e-123 | 50.11 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G42630.1 | 6.8e-29 | 28.65 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G02150.1 | 3.6e-22 | 25.71 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G02860.1 | 3.1e-21 | 22.81 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22470.1 | 1.1e-18 | 24.48 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |