Sed0006935.1 (mRNA) Chayote v1

Overview
NameSed0006935.1
TypemRNA
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG09: 7011046 .. 7015358 (+)
Sequence length213
RNA-Seq ExpressionSed0006935.1
SyntenySed0006935.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTGGGTCGCATTGTAGAGCTTCACAAACATCTCATCGAACAGTTGGTACGAAGAAACGAAAGGTGAGGTTATAATAGAACTACATTTGACTTCCAACAATGGGTTGAACTCCAATTAAACAATCTAAATACTTAGAATTGATATTTACATCACTTTCAATGACTTTCATTTTTTTTTAAGAAAGTACAATCTCATCTAACCAGTTAGCAAGTTTTCAGTAACAAACGTTCAAACCATAAAATAAATGAAAATGAAAATGAAAAGGAGAGACCTTGACTTCCAGCTTGAGTTTGCTTGGCTTGAATAGCTAACTTCCTTGTTTGATTCAATGCATGAACTTCTTTAATAATTTAAAATACCACACCTCATCTAGAACTACAAAAAGAAAATCTAAATTGCAGTTAATTAAAAAAATGCAATAGAAGAATGACGAATTCGAGGAATGTATATTCAATAATTTTGAAACCTAGATTTAGTTTTTTGGATTTTAAAAGATGAAAGGTAGTGAATATACTTTAAAAAGAAAACAAATCAAAAGAAAAAAATTAACCAAGATAAAGAGACGGTGAAAAGCAACCTTTTTCACTACCTTTCTCACTGTTGACCTCCCAAATAAAAACAAAAAGTTTCATCCTTATATGGAGATTTCACTTCGACAAAACATCTCCTTAGATGGAAAAGTGTCAATTTTTTTGAATTTTAACCTTCATGTGTTTGAGGCAATTCAAGCCATTGGGTTTAAGGTTGTGTTTATTAGTGTGCCTAAAGTTATGGTGGAGGGGTTCTGGAGAAATTATTTGAAAGTTCATGATGTTTTAAGGACTGAGTTACAAACTTTTGTGAAGTATTTTACTAGTTTGGTGTGTGGAAATGACCACTATGATATAATTATTAGCAACAATTATTACTTTTTGTGAAATATTTCACTTGTTTGTTATTACTTTTTTGGTAGTCTTCTTTATGGCTAATTAGCAACAATTATTTTAACTTTTTTTAAAAAAAAATCAAAGTTAGAATGTATTTTAATTTTATATAGTCATTAAGGGGAAAGTGAAACAAATACAAAGGAAGTGATAAACTTTTAGAGTGAAACAAAAATGGACCTTTAAATCTTTTATGACTCTTTTTTTTCTCATAAAGTAAAAATGAAGTGTGAAAAGGTGTCATATTAGGTCCATTTTCTAGTAGATATCTTAACAAGGCCAGCCTAATCCAAGGAAACATACATTGATTGAAAACTACAAAAGCAAAGTGATCAAAATGGTACTTTTACTCAAACATCAACATGGGAAAAAGTTGGCACCTTTGAACTTGAAGTTGACAAAAAAGAAAAACAAAACATGTTTGGTTTAAAAATCTATGTTACATGAGGGTTGGGAATCTTCAAAGGCAGTTGTTATACCATGTGGTCTTGACTCAGCAAAACAGTGTCTTTTGGAAGAAGAAGAAGTGAAAAACTGATAATATTATCTTTGTGTGTCTGCAGTTTAATTTGCAGAAGAAAAAAAAATAAATGAATTACAAAAAAGAACCTCTAAAAAAACAGCCTAGATGCTTTTCTCACCGCCCTATTAAATCCCCATAGAAATAAAAATCAAATCCAAAAGCAAAAGAATAATTTTTTTTTAATCAATATGGCTTTTAATTTGCTTTGTTTTCTTCAGCCAAAGAACAAATGCCTATGAAAATGGGTTAACTTTTTTTTTCCCTATAAATGGAAATTTGAGGCCTTTATTTTTGGTATCTTATTTCTGTTTGGTTTAGTTTATTTAGAGGAGATTAGATCCCTTGTTAATAGGATATTGGAGGGGAAGAGAGAATTACTTTTATGGTTGTGTTTTGTTCTATGTATATATTCTATACACAGCCTAAAAGTAGGGTTTTGACTTTGGAGTTTGTCAAAAACTTAATTATATCCAAAATGCCTATCAACTAATTTGAGTTTGGTTTCGGCTCTATCACTTCTAATTGATTCAAATATTATTAATATCGTTTTAAGACCAGTAAACAACAAATATTAATGTGATTGTTTAGGGCTCGTTTGATAACCATTTTGTTTTTTGTTTTTGAAATTTAAGTCAACAACAACTATTTTATCATAGCTTTTTCTTATTTAAATATCTACATCTTACCTATATTTTAAGAAACAAAGCCAAAATTAGGAACAAAAAAAAAGTAGCTTCCAAAAGATTGTTTTTGTTTTTTAAATTTGGTTACTATATATTGACCTACTTTCTTAAGGAAAAATAGATACTTTATAGAAAAGATGGAGCACATGGTAGGAAAGTTGAATAGAAATAGGCTTAAATTTGATAAACCAAAAACAAAAAACCAAATGATTATCAAACGTACCTCAATTGTGAAAAAAATTATTATTAGAAAAGTAATTGAGGTCTCTTGATCACTTTTATAATGTGAGATTCTCAATACAATAATGAGATCAATGTCCATACTCCTTATTTTAACAAATAAACAAAAAATCGTGGACAATATTGTAAAAGAATATATTAATAAATTTCTAAAACAAGCAAGAACTCATATACAAACCCATATATGAAAAGAGGAAAAAGAATATATAGTCAATATTTCAAATTATGAATGCCCATCTCAATATGCAACAAAAATACACATGATCAAATACCCAAAAACAAGAACAAGAACAGAAAAATGAAGCACATTACAAACATTACCTCATGATTGCTTTTTGGATAGTGAAATGGGATCCTTAAATGAAAATCCTCATCTTCCCATTAATGATATTAGCCTTGGAATCATAAGAAACAAAATGTTTCAAACACAAAAAACACTAAGCAAATACCAGAAAACAACAATCACATTCCATATTCTGAGCTTCTCTAGTCCCATTTCCAGCATGGAAATAGAAAAACAACCCAGCCCTCAAAAGCTTAAACCAACCAAAGGTAAATAATGTTATTAATAGAAAAACTAAAGTTCGAGAGAAAATCAATATTACAAGACATATAATCATCAACACCTGTAAAATCTAATAGTAAAAACGAATTACACCTCTAAACCTATATTTGCCATTTGAAAACAACGAACAAAAGAACACACCAGACAATATTTAGAATTTAAGAATAGTCAAGATACATACAAGTTGACCTCGACATACAAGGCCCAACAAAAGGCTATAAATACAAGAAAGTAAGGGACTTTAGAAATAAATAATTTAAATAAATTTGAATTTTATATGATAAAACAAATGGTAAAATATAAATTTAGTCTCTATGAAATGATGAAAGTTAGAGTTTAGTTCTTATGATTTCAAAAACTAGAGTTTAGTCTCAACTTTTAGTTTTTTAAACCATGAAAACTAAATTCTAACTTTGTTCAAACTATAGAGACTAAACTTATATTTTACCCTAAAATAAATAGTGAAAATTTTCAAGATTACAACATACTTTTGTCCCTATTCAGGAAAACCCAAGGTTAGGATGTGTGTTTGAGAACTTGGTTTGCAAAGTGAAAAAGTCCGTGCTTTCAAGAATTGCTACAAATCAAGAATCTCCCCAAAAAAATCACCAACAATTAACCTAACTTTCAGAAACAAAAACAAGTCAAATGAAATCCAAAAACTCATATCTCATAACCAAATTAAAGGTCCAAAAATAAGAGAGAAAACAATATTAAAAAAATAGTTAAGATAAGTTCGAACACGAAGTTTGACAATACCAACAACTCAATGCCCCAGTAATATTCCATATGAATTTTACAAGAGGGTTAAGATAAAGAGCATCCTAAGACTAAACAACCCTTCACTATCCTCCTCACTCCAAGAATGGGAGTCTAACCTATAAACTGATTCGTAACTCTATGCATACATCTTAAAAATAATTTATTATTGCTAATTGTACTATTCATATAAAACCATTGGTTTAAAGACATGTCAGATTCATCCAATAATGGAAAGAGTTAGCTGCATACAATCTCTAACAACAAATAAAACATAGCCACAAAAGTTCAGTGAATGAAAGTTGTAACCAATCTAAGATCTCAAAGAACAATAGTGTCTGGCCTAGGGACGGACGTGGTTATCCTTGTTTCAAAAAAAAACCTTAAATGTTAATTTTCGTCCTCAAACCATTTCTTGTTTGTACATGAGGTATATAATCATGCTAACATCAATATTATTCATGTGCAGCCCATTCCTCCGAGCAGATATAAAAGTGAGGGCAACTCAAATGCTTAACGAGTTTATTGTCAATGCATTTATGCTCGGAGATGTGCTGAAAAAGCATCTACTTTTTTCCGTAACAGGTCTTTTTGCAGAGCAACTCACAGGCTAA

mRNA sequence

ATGGCGGTGGGTCGCATTGTAGAGCTTCACAAACATCTCATCGAACAGTTGGTACGAAGAAACGAAAGCCCATTCCTCCGAGCAGATATAAAAGTGAGGGCAACTCAAATGCTTAACGAGTTTATTGTCAATGCATTTATGCTCGGAGATGTGCTGAAAAAGCATCTACTTTTTTCCGTAACAGGTCTTTTTGCAGAGCAACTCACAGGCTAA

Coding sequence (CDS)

ATGGCGGTGGGTCGCATTGTAGAGCTTCACAAACATCTCATCGAACAGTTGGTACGAAGAAACGAAAGCCCATTCCTCCGAGCAGATATAAAAGTGAGGGCAACTCAAATGCTTAACGAGTTTATTGTCAATGCATTTATGCTCGGAGATGTGCTGAAAAAGCATCTACTTTTTTCCGTAACAGGTCTTTTTGCAGAGCAACTCACAGGCTAA

Protein sequence

MAVGRIVELHKHLIEQLVRRNESPFLRADIKVRATQMLNEFIVNAFMLGDVLKKHLLFSVTGLFAEQLTG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0006935Sed0006935gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0006935.1-exonSed0006935.1-exon-LG09:7011046..7011113exon
Sed0006935.1-exonSed0006935.1-exon-LG09:7015214..7015358exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0006935.1-cdsSed0006935.1-cds-LG09:7011046..7011113CDS
Sed0006935.1-cdsSed0006935.1-cds-LG09:7015214..7015358CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0006935.1Sed0006935.1-proteinpolypeptide