Sed0025253 (gene) Chayote v1

Overview


Name	Sed0025253
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cytochrome c biogenesis protein CCS1, chloroplastic
Location	LG10: 37274277 .. 37279709 (-)
RNA-Seq Expression	Sed0025253
Synteny	Sed0025253

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAGAGCTATGGTCGTTATTAACGCTGGGAAGGCAAGAAAGTTGAAACCCACTTCAAAATTTGCGCAAAAATGGAAGCTTTAATCCTCAAAAATCCAAACCCATTTTTTCAATCTTCCTTCAAACACCCAATCACTCCCAATCTCTGCTTCAGAACCCTCTCTTTCAATTCCAGGATTAAGGCCAAAGCATCATCGCCGCAGGACAAGAAGAAGAACAACAACAACAATGTCGCCAACAAGATTGTGCTGTCGGAAGCAGCGCCGCCGCTTGCGGCGGAGACTGATCAAAGTAATGGAAGCACTGAAACCGAAGACAAGTCTGGAAATGGGAGCGGTTCGATTGTGAAGCTGCTTAAGAGATTGCCCAAAAGGGTTTTGGGGGTTTTGTCTAATTTGCCTTTGGCTATTGGTGAAATGTTTGTCATCTCTGCTCTCATGGCGCTCGGTATGATTTCTTCACCATTATTGTTCCTTATCTTTGAAATGCTTTTGAATAGCCTCGCTGTCATGAGTACATTAAAATAAGGAAGAGATGATGTTTTCAATCTATAGTGACCACTGATCACTTAGCTAGGGAATAATATTTTACTCGATTTTTTGACATCCAAATATTGTAAGGTGTGTCATATGAGAATAGTTGAGGTCCGCGTAAATAGGCTTAGACACACTGTTATCATAAAAAATAATAATAAAAAAAAAATTTTAAAATAATAATCGAAGTAACCAACAAAAACAATAGCTGAAGAGCATAAGGGTAAGCGTAAACCCATGAATCAAAAGGTCATGGGTTCGAATAGTCCTTTTCTCAATGGTTGATGAACTCTCTTTTGCAACTTGAAAGCCCTGTCCCTTTTTCTATTCTAAATGTCACTGTTATGTTTTTCTTTATAAGATAGTATGGAGTATGGGATTTCATCTCATTTCCAATGTGTGATCTAGAATATGCTCCTTCGAGATGGTGCCTCTTTTAGGTTCATCATTCTTATATTAGAACCCAATTTCATTTTTATTGGACTCAAGATGGTGCTTCCATTTGGGTTTTAATGGACTATGATACCATATTAGAAATTACGAGCATTCATCCCAAAACTAATTGATGGAAGATAGTTACTTTTTGTAAGCCATTGGCCGCATCAGCTGTTGGACATGTATAAATGATGGCAAGTCAGTTTTGAGTTCATCATGTTTGGCATTCTGTTGCATTGCAGGTACTTTCATTGATCAAGGAGAGGCCCCTGATTTTTATTTCCAGAAGTACTCTGAGGATAATCCAATATGGGGATTTCTCACTTGGAGATGGATTCTCCCATTTGGGTTTGATCATATGTACACATCTACCATTTTTCTAGGGATGTTAGCTCTTCTTGGAATCTCACTCATGGCTTGCACTTACACAACTCAGATTCCTCTTGTCAAGGTTGCAAGAAGGTTACAACACTCTCTCTTTCTCTCCCACACATTCACGTTCCTTGCTTTTTTGTTATGAACATTCAACTTCTGTATGCAGATGGAACTTCTTGCAGACTGGTGAAGCTATTAGGAAGCTGGAATGTTCTGACATCTTACCCAGAGCATCAGTCCAAGATTTGGGGGTTATTCTAATGGGAGCAGGATATGAGGTTATAACTCAATATTTATTTGATGCTAATTATGATAGTTTTTTATGTCGTGGTTTTTTCTCCAGTTTAGCTTGTATGGTAGAAGCTATTCTTGTTTCTTATGCTATGAGGTTATAACTCAATATTTATTCTTAAAACCTCTGACAGAAAGAACTATCATAAATAGCAAATAATAAATGGGCACAAGAAAGATGGATTACTGATTGATCTGATCATCAGTAATCCATCTTTTATCATATAAAACAGACCACAATGACCATCATTCGACAGAAAAAACCACGGACAGAAAGAACTATCGTAAATATGCTAATTATGATATGAGGTTATAACTCAATATTTATTCTAAACAGCATCAAACACTGATATTGTTGATGCTAATTTCAGTGTTTAAATTAAATCATAAATAGGTTCTACCATACAAGCTAAATATGGTTTCAAGATGCTACTTCTTATGGAAAGTTTCTGGCCTTACTGCTGGCAAGTGTCTATGTGGAAATTTCTTGAACTATGTTGCCCTACAATTACTTAGTCGGGAGTCTCACTGAACGGTCAACAAGCAAGGATCTTTAATTTTCGTATCGGGCTTTTATGCATTTTGGGTCATATGTTGTATTAGAGTTTTATGATAGTATACTATATAAACTCTCTTAAAACTCTAGCCTTTTTTTACCAATCATTTGTATTCTTATCTCCTTAATAAAATGATTTCTCTCCCCTGTATGTGAACATAGTTAATACAACGTTCGTGAACCACGTAAATCATTGTGTTTTGTCTTGCATTTTTCTTAATTTTCTTTGTTGTTCGGTTTATTCATAACAGTCTAAGCTGAAAGTGCAATTCACTAACGATAACAATCATCAATTCTGCAGGTATTTATTAAAGGACCAACTTTATATGCTTTCAAGGGATTAGCTGGTCGATTTGCGCCTATTGGTGTACATTTGGCCATGCTTTTGATTATGGGTGGTGCTACCCTCAGTGCAGCTGGGAACTTCAGGGGTTCAGTTACAGTTCCTCAGGGACTGAATTTTGTAGTTGGAGATGTTCTGAAACCGAGTGGATCTCTCTCCAAACCAACTGAAGCTTTCAATACTGAAGTTCATGTCAACAAGTTCTACATGGATTACTATGACAGTGGAGAGGTGAATCTTGATATGGAAATCAATAATAATTATAAAACCAGTGATAGAGTTATATTTTTCGCCACCATGGAGAGACCTTGCGGTCAAGAAGGATCTTAAGTAACTAAGAGGTGATGTGTTCAATCTATGATGGTCAGGAATAATTTTTTACGGATTTCCTTGACATCCAAATGTCATAGGGGTTAGGCCGTATATCCCGTGAGAATAGTTGAGATGCACGTAAGTTGGTCGAACAATCATGGATATAAAAAGAAAAAGATAATAATAAGAAGAGTTATATTTTTTAAGAAAAAATCTTGTGGAAACTACCATGGTTTGGCCTGGTGGTTAATCTTGTAGTGTAAATAATAAAGGGTTTCGAGAGAACGAATTTAAGTTTGGGATTGCCGCCTTTTTATGATTTTATATTTTTATACAAATTTAGTAGGCTCATATGCTTTTTGTTGTGTGCAAATTCGTCTGGACAACATGCTAGACTAGGACCTTGTTTTAAAACCATATTGATTCTCATTCCTAGGAAAAAAAATGCAGTTTTTCTTTAATAGTGCATGAATAGATTCACAGTCAATCACCTCTATTTACATTTCGAGTTTTCGAATCTGATTTTGCAGGTGAAGCAGTTTCATACTGATCTTTCTTTGTTTGATCTTAATGGAAAAGAGGTGATGAGGAAGACAATTAGTGTAAATAATCCTTTAAGGTATGGAGGTTTTACAATTTACCAAACCGATTGGGGATTTTCAGCTCTGCAAATACTTAAGAATGATGAAGGACCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAATGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGGGATGTTGATTCACCCGACGTGAAGGGAATGTAAGTCATTTCTTTTATGCTTCTCATGCGGGTATGTCTAGGAGAAATTGTGTTTTATGGCATGTAAGTCACATTCAAAGGTTCAAACTTCAAACCCAATTGTAATGATTTATACGTCTTTGAACCATCGTAAGCTAAGAAGCATGGACATGGGATACTGGCACGGCAATACACCAATTTTTGAAAAGTAGGACACGGATATGTCGAGGACTCAGTATTTATTTATTATTATATAATTTTAAACGATCAAACCAAAACTATTTTACTTTTTTACTCTCTAAGAAATATAATTTTTTTAAAAAAATTAGTGTTGAATCCACATAATTATTCGAGTCTATTTAAATCCAATAAAAAACAAAATTTCACTATCCTTTAAATGTCTACTAAAAGCCCACAAAACAAAATTTATACGCAAGCTAAACTCTTAATAATCTTATAATATTTTAGTTTTTCTTTCATTTCCCTCCACTCCATCTTATTTTCTCTTAATTTTAAGTGTTGTACACATGTTCGAAGCATGACTAGAAGTATTTGTGTCCTTGACAACCAAATGTTGTAAGATCATGCAGTTAATTTAGTCATCTAAGTAGGAATTAATTTCTTATGAGTTCTCTTGACAACCAATGTTGTAGGATCATGCAGTTGTTCCGTAAAAATGGTCGAAGTGTGTGTAAGCTAGTATGAACCCTCACGAAAAAAGAAAAAAGAAAGACCTAAAATTGAAGGAGATGAGAAATATGAAGCACGTGTGGACAGCCTGTCTAGTATTCTCATCTTTGTTACTTATGCGTAGTATCTCTCTTCATATAAATTCACTCACTTCCTCTGCGCATGATGTAAATTCAGATCAATGCTTGCTCGTGATCTGCAATCCATTGTCCTGTATGATCAGGAAGGGAAGTTTGTCGGGGTTCGACGTCCGAGCTCTAGGCTTCCGATCGACATCAACGGTATAAAAATTGAAATAGTTGATGCTATTGGAAGCACTGGACTGGAGTTGAAGGTAACGGCTCGGAAACATTCAGATGTTTTTACGTCGATGTATCGAAACTAGATTCTATCTGTCATTTATATTTGCATATTTCTGTACTATAGTCATTGAAATCTTCTGTTTTTTTTTTCTTTTTCTCAAGACTGACCCAGGAGTACCTGTTGTGTATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTCTCTCATTCACAGGTAAATATATTTTCCTTCAAGCTCTCGTGATGATACTTTCTTTGATATTGAATGGCTTGTAATGCATCTATTCATAAACAACTTTCAATAATGTTCCATACCTTTTCCTCTTTTTTCCTCATATTTTAAGCTTTACATTCTCACTGATTGAAAATAAAAGTAACATGGCAGTATATTCATGTATCTTTACCATTTCTTTGATTAAAAGATTTGGGCCATACAAGATGGAACGGTAGTGATTGTCGGAGGAAAGACGAACCGTGCAAAGGTCGAATTTCCACAGGAGATTGATCGATTACTCGATAAGGTTCCGGAAATCATCGAACCATCTCGCAATGAGTTGATTAACAATGATGCCTAACAAAATGGAACAAGCCAGCATTCAAAGGGGGCAACAACAATCAGTGTTCAACTCAAATTTTGGCCTTAGATCACATTTGTTTTTCTTGTTTCTTATATACATGTAGAGGATGATTTTACCAATTTATAATTCTTTATTCACCACCATGTTCCATATCATAAATAATTTTTGTATATAATGTAACACAAAGTAGCATATTAATTTGAAGGTGAAG

mRNA sequence

AACAGAGCTATGGTCGTTATTAACGCTGGGAAGGCAAGAAAGTTGAAACCCACTTCAAAATTTGCGCAAAAATGGAAGCTTTAATCCTCAAAAATCCAAACCCATTTTTTCAATCTTCCTTCAAACACCCAATCACTCCCAATCTCTGCTTCAGAACCCTCTCTTTCAATTCCAGGATTAAGGCCAAAGCATCATCGCCGCAGGACAAGAAGAAGAACAACAACAACAATGTCGCCAACAAGATTGTGCTGTCGGAAGCAGCGCCGCCGCTTGCGGCGGAGACTGATCAAAGTAATGGAAGCACTGAAACCGAAGACAAGTCTGGAAATGGGAGCGGTTCGATTGTGAAGCTGCTTAAGAGATTGCCCAAAAGGGTTTTGGGGGTTTTGTCTAATTTGCCTTTGGCTATTGGTGAAATGTTTGTCATCTCTGCTCTCATGGCGCTCGGTACTTTCATTGATCAAGGAGAGGCCCCTGATTTTTATTTCCAGAAGTACTCTGAGGATAATCCAATATGGGGATTTCTCACTTGGAGATGGATTCTCCCATTTGGGTTTGATCATATGTACACATCTACCATTTTTCTAGGGATGTTAGCTCTTCTTGGAATCTCACTCATGGCTTGCACTTACACAACTCAGATTCCTCTTGTCAAGGTTGCAAGAAGATGGAACTTCTTGCAGACTGGTGAAGCTATTAGGAAGCTGGAATGTTCTGACATCTTACCCAGAGCATCAGTCCAAGATTTGGGGGTTATTCTAATGGGAGCAGGATATGAGGTATTTATTAAAGGACCAACTTTATATGCTTTCAAGGGATTAGCTGGTCGATTTGCGCCTATTGGTGTACATTTGGCCATGCTTTTGATTATGGGTGGTGCTACCCTCAGTGCAGCTGGGAACTTCAGGGGTTCAGTTACAGTTCCTCAGGGACTGAATTTTGTAGTTGGAGATGTTCTGAAACCGAGTGGATCTCTCTCCAAACCAACTGAAGCTTTCAATACTGAAGTTCATGTCAACAAGTTCTACATGGATTACTATGACAGTGGAGAGGTGAAGCAGTTTCATACTGATCTTTCTTTGTTTGATCTTAATGGAAAAGAGGTGATGAGGAAGACAATTAGTGTAAATAATCCTTTAAGGTATGGAGGTTTTACAATTTACCAAACCGATTGGGGATTTTCAGCTCTGCAAATACTTAAGAATGATGAAGGACCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAATGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGGGATGTTGATTCACCCGACGTGAAGGGAATATCAATGCTTGCTCGTGATCTGCAATCCATTGTCCTGTATGATCAGGAAGGGAAGTTTGTCGGGGTTCGACGTCCGAGCTCTAGGCTTCCGATCGACATCAACGGTATAAAAATTGAAATAGTTGATGCTATTGGAAGCACTGGACTGGAGTTGAAGACTGACCCAGGAGTACCTGTTGTGTATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTCTCTCATTCACAGATTTGGGCCATACAAGATGGAACGGTAGTGATTGTCGGAGGAAAGACGAACCGTGCAAAGGTCGAATTTCCACAGGAGATTGATCGATTACTCGATAAGGTTCCGGAAATCATCGAACCATCTCGCAATGAGTTGATTAACAATGATGCCTAACAAAATGGAACAAGCCAGCATTCAAAGGGGGCAACAACAATCAGTGTTCAACTCAAATTTTGGCCTTAGATCACATTTGTTTTTCTTGTTTCTTATATACATGTAGAGGATGATTTTACCAATTTATAATTCTTTATTCACCACCATGTTCCATATCATAAATAATTTTTGTATATAATGTAACACAAAGTAGCATATTAATTTGAAGGTGAAG

Coding sequence (CDS)

ATGGAAGCTTTAATCCTCAAAAATCCAAACCCATTTTTTCAATCTTCCTTCAAACACCCAATCACTCCCAATCTCTGCTTCAGAACCCTCTCTTTCAATTCCAGGATTAAGGCCAAAGCATCATCGCCGCAGGACAAGAAGAAGAACAACAACAACAATGTCGCCAACAAGATTGTGCTGTCGGAAGCAGCGCCGCCGCTTGCGGCGGAGACTGATCAAAGTAATGGAAGCACTGAAACCGAAGACAAGTCTGGAAATGGGAGCGGTTCGATTGTGAAGCTGCTTAAGAGATTGCCCAAAAGGGTTTTGGGGGTTTTGTCTAATTTGCCTTTGGCTATTGGTGAAATGTTTGTCATCTCTGCTCTCATGGCGCTCGGTACTTTCATTGATCAAGGAGAGGCCCCTGATTTTTATTTCCAGAAGTACTCTGAGGATAATCCAATATGGGGATTTCTCACTTGGAGATGGATTCTCCCATTTGGGTTTGATCATATGTACACATCTACCATTTTTCTAGGGATGTTAGCTCTTCTTGGAATCTCACTCATGGCTTGCACTTACACAACTCAGATTCCTCTTGTCAAGGTTGCAAGAAGATGGAACTTCTTGCAGACTGGTGAAGCTATTAGGAAGCTGGAATGTTCTGACATCTTACCCAGAGCATCAGTCCAAGATTTGGGGGTTATTCTAATGGGAGCAGGATATGAGGTATTTATTAAAGGACCAACTTTATATGCTTTCAAGGGATTAGCTGGTCGATTTGCGCCTATTGGTGTACATTTGGCCATGCTTTTGATTATGGGTGGTGCTACCCTCAGTGCAGCTGGGAACTTCAGGGGTTCAGTTACAGTTCCTCAGGGACTGAATTTTGTAGTTGGAGATGTTCTGAAACCGAGTGGATCTCTCTCCAAACCAACTGAAGCTTTCAATACTGAAGTTCATGTCAACAAGTTCTACATGGATTACTATGACAGTGGAGAGGTGAAGCAGTTTCATACTGATCTTTCTTTGTTTGATCTTAATGGAAAAGAGGTGATGAGGAAGACAATTAGTGTAAATAATCCTTTAAGGTATGGAGGTTTTACAATTTACCAAACCGATTGGGGATTTTCAGCTCTGCAAATACTTAAGAATGATGAAGGACCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAATGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGGGATGTTGATTCACCCGACGTGAAGGGAATATCAATGCTTGCTCGTGATCTGCAATCCATTGTCCTGTATGATCAGGAAGGGAAGTTTGTCGGGGTTCGACGTCCGAGCTCTAGGCTTCCGATCGACATCAACGGTATAAAAATTGAAATAGTTGATGCTATTGGAAGCACTGGACTGGAGTTGAAGACTGACCCAGGAGTACCTGTTGTGTATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTCTCTCATTCACAGATTTGGGCCATACAAGATGGAACGGTAGTGATTGTCGGAGGAAAGACGAACCGTGCAAAGGTCGAATTTCCACAGGAGATTGATCGATTACTCGATAAGGTTCCGGAAATCATCGAACCATCTCGCAATGAGTTGATTAACAATGATGCCTAA

Protein sequence

MEALILKNPNPFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKNNNNNVANKIVLSEAAPPLAAETDQSNGSTETEDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAIGEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVILMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVGDVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEIIEPSRNELINNDA

Homology

[Close]

BLAST of Sed0025253 vs. NCBI nr
Match: XP_022988731.1 (cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 949.9 bits (2454), Expect = 9.6e-273
Identity = 481/553 (86.98%), Postives = 509/553 (92.04%), Query Frame = 0


Query: 1   MEALILKNPN------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKNNNNNV 60
           ME LIL NPN      PF  S+F+  ITPNLC RTLSF+   K KAS  QDKK     NV
Sbjct: 1   MEGLILHNPNPYLSKTPFLHSAFRPQITPNLCCRTLSFSVTCKVKAS--QDKKP---KNV 60

Query: 61  ANKIVLSEAAPPLAAETDQSNG-STETEDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAI 120
           +NKIVLSEAAPPLA ETD +NG +TE E KSGNGSG ++KL+KRLPKR+LG LSNLPLAI
Sbjct: 61  SNKIVLSEAAPPLAEETDNNNGNNTEAEVKSGNGSGLMMKLVKRLPKRILGALSNLPLAI 120

Query: 121 GEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLG 180
           GEMF I+ALMALGTFIDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMYTSTIFL 
Sbjct: 121 GEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFLA 180

Query: 181 MLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVILMGA 240
           ML+LLG+SLMACTYTTQIPLVKVARRWNFLQ+G+AIRKLECS+ILPRASVQDLGV+LMGA
Sbjct: 181 MLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGDAIRKLECSEILPRASVQDLGVVLMGA 240

Query: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVG 300
           GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAG+FRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVVG 300

Query: 301 DVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVN 360
           DVL PSG LSKPTEAFNTEVHVN FYMDYYDSGEVKQFH+DLSLFDLNGKEVMRKTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISVN 360

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420

Query: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDI+G+KIEI+DAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPGV 480

Query: 481 PVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEI 540
           PVVYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAKVEFP+EID LLD+VPEI
Sbjct: 481 PVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPEI 540

Query: 541 IEPSRNELINNDA 547
           IEPS N L NNDA
Sbjct: 541 IEPSHNGLNNNDA 548

[Close]

BLAST of Sed0025253 vs. NCBI nr
Match: XP_023530089.1 (cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 948.0 bits (2449), Expect = 3.7e-272
Identity = 479/553 (86.62%), Postives = 508/553 (91.86%), Query Frame = 0


Query: 1   MEALILKNPN------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKNNNNNV 60
           ME LIL NPN      PF  SSF+  ITPNLC RTLSF+   K KAS  QDKK     NV
Sbjct: 1   MEGLILHNPNPYLSKTPFLHSSFRPQITPNLCCRTLSFSVTCKVKAS--QDKKP---KNV 60

Query: 61  ANKIVLSEAAPPLAAETDQSNG-STETEDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAI 120
           +NKIVLSEAAPPLA E+D +NG +TE E K GNGSG ++KL+KRLPKR+LG LSNLPLAI
Sbjct: 61  SNKIVLSEAAPPLAEESDDNNGNNTEAEVKPGNGSGLLMKLVKRLPKRILGALSNLPLAI 120

Query: 121 GEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLG 180
           GEMF I+ALMALGTFIDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMYTSTIFL 
Sbjct: 121 GEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFLA 180

Query: 181 MLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVILMGA 240
           ML+LLG+SLMACTYTTQIPLVKVARRWNFLQ+G+AIRKLECS+ILPRASVQDLGV+LMGA
Sbjct: 181 MLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGDAIRKLECSEILPRASVQDLGVVLMGA 240

Query: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVG 300
           GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAG+FRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVVG 300

Query: 301 DVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVN 360
           DVL PSG LSKPTEAFNTEVHVN FYMDYYDSGEVKQFH+DLSLFDLNGKEVMRKTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISVN 360

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420

Query: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDI+G+KIEI+DAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPGV 480

Query: 481 PVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEI 540
           PVVYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAKVEFP+EID LLD+VPEI
Sbjct: 481 PVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPEI 540

Query: 541 IEPSRNELINNDA 547
           IEPS N+  NNDA
Sbjct: 541 IEPSHNQFNNNDA 548

[Close]

BLAST of Sed0025253 vs. NCBI nr
Match: KAG7022426.1 (Cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 942.2 bits (2434), Expect = 2.0e-270
Identity = 479/553 (86.62%), Postives = 505/553 (91.32%), Query Frame = 0


Query: 1   MEALILKNPN------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKNNNNNV 60
           ME LIL NPN      PF  SSF+  ITP LC RTLSF+   K KAS  QDKK     NV
Sbjct: 24  MEGLILHNPNPYLSKTPFLHSSFRPRITPYLCCRTLSFSVTCKVKAS--QDKKP---KNV 83

Query: 61  ANKIVLSEAAPPLAAETD-QSNGSTETEDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAI 120
           +NKIVLSEAAPPLA ETD  S  +TE E K GNGSG ++KL+KRLPKR+LG LSNLPLAI
Sbjct: 84  SNKIVLSEAAPPLAEETDNNSANNTEAEVKPGNGSGLMMKLVKRLPKRILGALSNLPLAI 143

Query: 121 GEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLG 180
           GEMF I+ALMALGTFIDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMYTSTIFL 
Sbjct: 144 GEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFLA 203

Query: 181 MLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVILMGA 240
           ML+LLG+SLMACTYTTQIPLVKVARRWNFLQ+GEAIRKLECS+ILPRASVQDLGV+LMGA
Sbjct: 204 MLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGEAIRKLECSEILPRASVQDLGVVLMGA 263

Query: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVG 300
           GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAG+FRGSVTVPQGLNFVVG
Sbjct: 264 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVVG 323

Query: 301 DVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVN 360
           DVL PSG LSKPTEAFNTEVHVN FYMDYYDSGEVKQFH+DLSLFDLNGKEVMRKTISVN
Sbjct: 324 DVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISVN 383

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV
Sbjct: 384 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 443

Query: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDI+G+KIEI+DAIGSTGLELKTDPGV
Sbjct: 444 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPGV 503

Query: 481 PVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEI 540
           PVVYAGFGALMLTTC+S+LSHSQIWAIQDGTVVI+GGKTNRAKVEFP+EID LLD+VPEI
Sbjct: 504 PVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIIGGKTNRAKVEFPEEIDSLLDRVPEI 563

Query: 541 IEPSRNELINNDA 547
           IEPS N L NNDA
Sbjct: 564 IEPSHNVLNNNDA 571

[Close]

BLAST of Sed0025253 vs. NCBI nr
Match: XP_022931609.1 (cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 941.8 bits (2433), Expect = 2.6e-270
Identity = 479/553 (86.62%), Postives = 505/553 (91.32%), Query Frame = 0


Query: 1   MEALILKNPN------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKNNNNNV 60
           ME LIL NPN      PF  SSF+  ITP LC RTLSF+   K KAS  QDKK     NV
Sbjct: 1   MEGLILHNPNPYLSKTPFLHSSFRPQITPYLCCRTLSFSVTCKVKAS--QDKKP---KNV 60

Query: 61  ANKIVLSEAAPPLAAETD-QSNGSTETEDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAI 120
           +N+IVLSEAAPPLA ETD  S  +TE E K GNGSG ++KL+KRLPKR+LG LSNLPLAI
Sbjct: 61  SNRIVLSEAAPPLAEETDNNSANNTEAEVKPGNGSGLMMKLVKRLPKRILGALSNLPLAI 120

Query: 121 GEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLG 180
           GEMF I+ALMALGTFIDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMYTSTIFL 
Sbjct: 121 GEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFLA 180

Query: 181 MLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVILMGA 240
           ML+LLG+SLMACTYTTQIPLVKVARRWNFLQ+GEAIRKLECS+ILPRASVQDLGV+LMGA
Sbjct: 181 MLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGEAIRKLECSEILPRASVQDLGVVLMGA 240

Query: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVG 300
           GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAG+FRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVVG 300

Query: 301 DVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVN 360
           DVL PSG LSKPTEAFNTEVHVN FYMDYYDSGEVKQFH+DLSLFDLNGKEVMRKTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISVN 360

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420

Query: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDI+G+KIEI+DAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPGV 480

Query: 481 PVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEI 540
           PVVYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAKVEFP+EID LLD+VPEI
Sbjct: 481 PVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPEI 540

Query: 541 IEPSRNELINNDA 547
           IEPS N L NNDA
Sbjct: 541 IEPSHNGLNNNDA 548

[Close]

BLAST of Sed0025253 vs. NCBI nr
Match: XP_008454876.1 (PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo])

HSP 1 Score: 924.9 bits (2389), Expect = 3.3e-265
Identity = 476/557 (85.46%), Postives = 497/557 (89.23%), Query Frame = 0


Query: 1   MEALILKNPN-----------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKN 60
           ME LIL NPN           PF  S F H ITP    +  SF+   K KAS  QDKK  
Sbjct: 11  MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTA-QIRSFSVTCKNKAS--QDKKL- 70

Query: 61  NNNNVANKIVLSEAAPPLAAETDQSNGSTETEDKSGNGSGSIVKLLKRLPKRVLGVLSNL 120
              NV+NKIVLSEAAPPLA E    +G+ E E K GNGSGS  KL+KRLPKR+LG LSNL
Sbjct: 71  --KNVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGS-TKLVKRLPKRILGALSNL 130

Query: 121 PLAIGEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTST 180
           PLAIGEMF I+ALMALGT IDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMY+ST
Sbjct: 131 PLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSST 190

Query: 181 IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVI 240
           IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQ+GE IRKLECSDILPRASVQDLGV+
Sbjct: 191 IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVV 250

Query: 241 LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLN 300
           LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIM GATLSA G+FRGSVTVPQGLN
Sbjct: 251 LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLN 310

Query: 301 FVVGDVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKT 360
           FVVGDVL PSG LSKPTEAFNTEVHVNKFYM+YYDSGEVKQF++DLSLFDLNGKEVMRKT
Sbjct: 311 FVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKT 370

Query: 361 ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD 420
           ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD
Sbjct: 371 ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD 430

Query: 421 SPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT 480
           SP+VKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT
Sbjct: 431 SPNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT 490

Query: 481 DPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDK 540
           DPGVP+VYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFP+E+DRLLDK
Sbjct: 491 DPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDK 550

Query: 541 VPEIIEPSRNELINNDA 547
           VPEIIEPS N+L NNDA
Sbjct: 551 VPEIIEPSHNKLKNNDA 560

[Close]

BLAST of Sed0025253 vs. ExPASy Swiss-Prot
Match: Q9XIA4 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCS1 PE=1 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 3.2e-210
Identity = 366/515 (71.07%), Postives = 430/515 (83.50%), Query Frame = 0


Query: 25  LCFRTLSFNSRIKAKASSPQD--KKKNNNNNVANKIVLSEAAPPLAAETDQS--NGSTET 84
           LC RT + +     K   PQD  ++ ++N N+   I LS++APP+  ET      G    
Sbjct: 25  LC-RTRNVSLITNCKLQKPQDGNQRSSSNRNLTKTISLSDSAPPVTEETGDGIVKGGGNG 84

Query: 85  EDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAIGEMFVISALMALGTFIDQGEAPDFYFQ 144
               G+G G +   LK LP++VL VLSNLPLAI EMF I+ALMALGT I+QGE PDFYFQ
Sbjct: 85  GGGGGDGRGGL-GFLKILPRKVLSVLSNLPLAITEMFTIAALMALGTVIEQGETPDFYFQ 144

Query: 145 KYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLGMLALLGISLMACTYTTQIPLVKVARRW 204
           KY EDNP+ GF TWRWI   G DHMY++ IFLGML LL  SLMACTYTTQIPLVKVARRW
Sbjct: 145 KYPEDNPVLGFFTWRWISTLGLDHMYSAPIFLGMLVLLAASLMACTYTTQIPLVKVARRW 204

Query: 205 NFLQTGEAIRKLECSDILPRASVQDLGVILMGAGYEVFIKGPTLYAFKGLAGRFAPIGVH 264
           +F+++ EAI+K E +D LPRAS+QDLG+ILMG G+EVF+KGP+LYAFKGLAGRFAPIGVH
Sbjct: 205 SFMKSDEAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKGPSLYAFKGLAGRFAPIGVH 264

Query: 265 LAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVGDVLKPSGSLSKPTEAFNTEVHVNKFYM 324
           +AMLLIM G TLSA G+FRGSVTVPQGLNFV+GDVL P G  S PT+AFNTEVHVN+F M
Sbjct: 265 IAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGFFSIPTDAFNTEVHVNRFTM 324

Query: 325 DYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDE 384
           DYYDSGEV QFH+DLSL DLNGKEV+RKTISVN+PLRYGG T+YQTDW FSALQ+ K+ E
Sbjct: 325 DYYDSGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGVTVYQTDWSFSALQVTKDGE 384

Query: 385 GPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRR 444
           GPFNLA+AP+KINGDKKLYGTFLPVGD ++P+VKGISMLARDLQSIV+YD +GKF G+RR
Sbjct: 385 GPFNLAMAPIKINGDKKLYGTFLPVGDTNAPNVKGISMLARDLQSIVVYDLDGKFAGIRR 444

Query: 445 PSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPVVYAGFGALMLTTCVSYLSHSQIWAI 504
           PSS+LPI+ING+KI I DAIGSTGLELKTDPGVPVVYAGFGALMLTTC+SYLSHSQIWA+
Sbjct: 445 PSSKLPIEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCISYLSHSQIWAL 504

Query: 505 QDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEIIE 536
           Q+GT ++VGGKTNRAK +FP +++RLLD+VPE+I+
Sbjct: 505 QNGTALVVGGKTNRAKNQFPDDMNRLLDQVPELIK 537

[Close]

BLAST of Sed0025253 vs. ExPASy Swiss-Prot
Match: Q75KA9 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CCS1 PE=2 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 5.8e-204
Identity = 346/493 (70.18%), Postives = 416/493 (84.38%), Query Frame = 0


Query: 57  KIVLSEAAPPLAAETDQSNGSTETEDKSGNGSGSIVK--------LLKRLPKRVLGVLSN 116
           ++V  +AAPP++       G  E E   G G G + +        L++RL KR L +LSN
Sbjct: 68  QVVFFDAAPPVSQRGGGGGGEGEGE---GEGEGKVARRKENAALGLVRRLTKRTLSLLSN 127

Query: 117 LPLAIGEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTS 176
           LPLAI EMF I+ALMALGT IDQGEAP +YF+K+ EDNP++GF+TWRWIL  GFDHM++S
Sbjct: 128 LPLAISEMFAIAALMALGTVIDQGEAPSYYFEKFPEDNPVFGFITWRWILTPGFDHMFSS 187

Query: 177 TIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGV 236
            +FLG+LALL  SLMACTYTTQIP+VKVARRW+F+ +  +IRK E ++ LPRAS+QDLGV
Sbjct: 188 PVFLGLLALLAASLMACTYTTQIPIVKVARRWSFMHSAGSIRKQEFAESLPRASIQDLGV 247

Query: 237 ILMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGL 296
           ILMG GYEVF KGP+LYAFKGLAGRFAPIGVH+AM+ IM GATLSA G+F+GSV VPQGL
Sbjct: 248 ILMGYGYEVFTKGPSLYAFKGLAGRFAPIGVHIAMIFIMAGATLSATGSFKGSVDVPQGL 307

Query: 297 NFVVGDVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRK 356
           NFV+GDV+KP G LS   + FNTEVHVN+FYM+YYDSGEV QF++DLSLFDL+GKEVMRK
Sbjct: 308 NFVIGDVMKPKGVLSFVPDVFNTEVHVNRFYMEYYDSGEVSQFYSDLSLFDLDGKEVMRK 367

Query: 357 TISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDV 416
           TI VN+PLRYGG TIYQTDWGFSALQ+ KN EGPFNLA+APLK+NGDKKL+GT LP+ + 
Sbjct: 368 TIKVNDPLRYGGVTIYQTDWGFSALQVKKNGEGPFNLAMAPLKLNGDKKLFGTLLPLENS 427

Query: 417 DSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELK 476
            S +VKGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPI+I+G +I I DAIGSTGL+LK
Sbjct: 428 GSSNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIEIDGNEIVIEDAIGSTGLDLK 487

Query: 477 TDPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLD 536
           TDPG+P+VYAGFGALMLTTC+SYLSHSQIWA+QDG+ V++GGKTNRAK+EF +E++RLLD
Sbjct: 488 TDPGIPIVYAGFGALMLTTCISYLSHSQIWALQDGSTVVIGGKTNRAKLEFSEEMNRLLD 547

Query: 537 KVPEIIEPSRNEL 542
           KVPE+I  +  ++
Sbjct: 548 KVPELISVNEKKI 557

[Close]

BLAST of Sed0025253 vs. ExPASy Swiss-Prot
Match: Q8GTZ9 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CCS1 PE=1 SV=2)

HSP 1 Score: 405.2 bits (1040), Expect = 1.2e-111
Identity = 241/557 (43.27%), Postives = 323/557 (57.99%), Query Frame = 0


Query: 35  RIKAKASSPQDKKKNNNNNVANKIVLSEAAPPL-----AAETDQSNGSTETEDKSGNGSG 94
           R  AK   P DKKK    NV +K+ L    P L        TD  +   +    SG G G
Sbjct: 37  RCFAKGGQPGDKKK---LNVTDKLRLGNTPPTLDVLKAPRPTDAPSAIDDAPSTSGLGLG 96

Query: 95  SIVKLLKRLP---------KRVLGVLSNLPLAIGEMFVISALMALGTFIDQGEAPDFYFQ 154
             V   + L          +R++  LS+LP AI  M +I+ L  LGTFI Q ++ ++Y  
Sbjct: 97  GGVASPRTLVQSNAVQVAWRRLMKELSSLPRAIAIMALIAVLSGLGTFIPQNKSIEYYLV 156

Query: 155 KYSED-NPIWGFLTWRWILPFGFDHMYTSTIFLGMLALLGISLMACTYTTQIPLVKVARR 214
            Y +    + GFLT   IL    DH+YT+  F   + LL  SL ACTYT Q P VKVA+R
Sbjct: 157 NYPDGAEKVLGFLTGDLILTLQLDHIYTADYFYLSMGLLAASLAACTYTRQWPAVKVAQR 216

Query: 215 WNFLQTGEAIRKLECSDILPRASVQDLGVILMGAGYEVFIKGPTLYAFKGLAGRFAPIGV 274
           W FL   +++ K   +++LP A V DLG IL+  GY+VF+K  +LY FKGLAG+  PIGV
Sbjct: 217 WRFLTQPKSLLKQGRTEVLPNARVSDLGAILLQRGYQVFVKDGSLYGFKGLAGKLGPIGV 276

Query: 275 HLAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVGDVLKPSGSLSKPTEAFNTEVHVNKFY 334
           H A+LL + G   S  G  +G+V  P+G +F V   L+PS  ++    + +  +HVNKF 
Sbjct: 277 HAALLLCLFGTAWSGFGTLKGNVMCPEGQDFQVASFLQPSSPIASMPASASNVIHVNKFT 336

Query: 335 MDYYDSGEVKQFHTDLSLFD--LNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSA--LQI 394
           +DY   G V QF++DLSL D    GKE+MRKTISVN+P R+ G T+YQTDW  SA  L++
Sbjct: 337 IDYRPDGSVAQFYSDLSLLDPAQGGKEMMRKTISVNDPFRFNGVTMYQTDWSLSAVTLRV 396

Query: 395 LKND------------------EGP-----------------FNLAVAPL--KINGDKKL 454
           L  D                   GP                 FNL +A L  K     +L
Sbjct: 397 LGQDAPLARAAQAAEAQAAASTSGPTSSASSTSDALPQQRTAFNLPMASLEGKPGVAGRL 456

Query: 455 YGTFLPVGD--VDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEI 514
           + TFLP+ +   D    KGIS+LARD QS+V YD +G+FVGVRRP S  PI++ G+ + +
Sbjct: 457 WATFLPLAEPGQDGSAPKGISILARDPQSVVFYDAKGQFVGVRRPGSGKPIEVEGLALVV 516

Query: 515 VDAIGSTGLELKTDPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAK 534
            D  G+TGLELK+DPGVP VYAGFG LM+TT +SYLSHSQ+WA+Q G+ + V G+TNRAK
Sbjct: 517 EDVTGATGLELKSDPGVPAVYAGFGGLMVTTLISYLSHSQVWALQQGSSLFVSGRTNRAK 576

[Close]

BLAST of Sed0025253 vs. ExPASy Swiss-Prot
Match: B1WRN9 (Cytochrome c biogenesis protein CcsB OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=ccsB PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.0e-95
Identity = 182/441 (41.27%), Postives = 276/441 (62.59%), Query Frame = 0


Query: 100 KRVLGVLSNLPLAIGEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILP 159
           ++++ ++++L LAI  +  I+     GT I+QGE   FY Q Y ED  ++GFLTW+ IL 
Sbjct: 21  RQLIKIVADLRLAIVLLLAIALFSISGTVIEQGETISFYQQNYPEDPALFGFLTWKVILI 80

Query: 160 FGFDHMYTSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILP 219
            G +H+YT+  FL +L L G SL  CT+T Q P +K AR+WNF Q      KL  S  L 
Sbjct: 81  LGLNHVYTTWWFLSLLVLFGTSLTTCTFTRQFPALKAARKWNFYQKARQFEKLALSTELA 140

Query: 220 RASVQDLGVILMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFR 279
              ++ +  +L   GY+ F +   +YA KG+ G+  PI VH AML+I+GGA   A   F 
Sbjct: 141 INDLKFVNNLLEQKGYKTFQENQAIYARKGIIGKIGPIVVHAAMLIILGGAIWGALTGFL 200

Query: 280 GSVTVPQGLNFVVGDVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFD 339
               VP G  F V ++++ +G LS+P    +  + VN+F++DY   G + QF++DLS+ +
Sbjct: 201 AQAMVPTGSEFKVNNIIE-AGPLSQPQIPKDWGIRVNRFWIDYTPDGTIDQFYSDLSVIN 260

Query: 340 LNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLY 399
            +G+E+  KTI VN PLRY G T YQTDWG + +Q   N+   F L +A L  NG+ +++
Sbjct: 261 NDGEELKHKTIYVNEPLRYHGVTFYQTDWGIAGVQAQVNNSPIFQLPMALLNTNGNGRIW 320

Query: 400 GTFLPVGDVDSPDV-KGISMLARDLQ-SIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIV 459
           GT++P      PD+ +G+S+LA+DLQ ++++YDQ+G      RP   + +DING++++I 
Sbjct: 321 GTWIPT----KPDLSEGVSLLAKDLQGTMMVYDQKGDLYSAVRPG--MILDINGVRLKIY 380

Query: 460 DAIGSTGLELKTDPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKV 519
             IGSTGL++K DPG+P VY GFG LM+   +SY+SHSQIW +Q+     +GGKTNR++V
Sbjct: 381 QLIGSTGLQIKADPGIPFVYTGFGLLMMGVIMSYVSHSQIWVLQEDEHCYIGGKTNRSQV 440

Query: 520 EFPQEIDRLLDKVPEIIEPSR 539
            F +E+  ++    E +EP +
Sbjct: 441 TFERELLGII----ESLEPEK 450

[Close]

BLAST of Sed0025253 vs. ExPASy Swiss-Prot
Match: Q3M6F7 (Cytochrome c biogenesis protein CcsB OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=ccsB PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 4.9e-94
Identity = 186/438 (42.47%), Postives = 268/438 (61.19%), Query Frame = 0


Query: 96  KRLPKRVLGVLSNLPLAIGEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWR 155
           K L +  L VL++L LAI  + +I+     GT I+QG++P FY   Y E   ++GFLTW+
Sbjct: 19  KFLRREFLPVLTDLRLAIALLLIIALFSISGTVIEQGQSPAFYQANYPEHPALFGFLTWK 78

Query: 156 WILPFGFDHMYTSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECS 215
            I   G DH+Y +  FL +L L G SL ACT+T Q+P +K A+RW + +     +KL  S
Sbjct: 79  VIQVVGLDHVYRTWWFLSLLVLFGTSLTACTFTRQLPALKTAQRWKYYEEPRQFQKLALS 138

Query: 216 DILPRASVQDLGVILMGAGYEVF-IKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSA 275
             L   SV  L  IL    Y++F  K   LYA KG+ GR  PI VH+ ++ I+ G+   A
Sbjct: 139 AELDAGSVNSLSQILQNRRYKIFQEKDDILYARKGIVGRIGPIIVHIGIVTILLGSIWGA 198

Query: 276 AGNFRGSVTVPQGLNFVVGDVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTD 335
              F     VP G  F V +++  +G L+      +  V VN+F++DY   G + QF++D
Sbjct: 199 MTGFIAQEMVPSGETFQVKNII-DAGPLAAGQFPQDWSVRVNRFWIDYTPKGGIDQFYSD 258

Query: 336 LSLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKING 395
           +S+ D  GKEV  K I VN PLRY G T YQTDWG S +++  N    F L +A L  NG
Sbjct: 259 MSVLDNQGKEVDHKKIFVNQPLRYHGVTFYQTDWGISGVRVRLNKSPIFQLPMALLNTNG 318

Query: 396 DKKLYGTFLPVGDVDSPDV-KGISMLARDLQSIVL-YDQEGKFVGVRRPSSRLPIDINGI 455
             +++GT++P      PD+ +G+S+LA+DLQ +VL YD +GK V   R  + +   +NG+
Sbjct: 319 QGRIWGTWIPT----KPDLSEGVSLLAKDLQGMVLIYDAQGKLVDTVR--AGMSTQVNGV 378

Query: 456 KIEIVDAIGSTGLELKTDPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKT 515
            ++++D +GSTGL++K DPG+P+VY GFG LML   +SY SHSQIWA+Q G  + VGGKT
Sbjct: 379 TLKVLDVVGSTGLQIKADPGIPIVYTGFGILMLGVVMSYFSHSQIWALQKGDRLYVGGKT 438

Query: 516 NRAKVEFPQEIDRLLDKV 531
           NRA+V F QE+  +L+++
Sbjct: 439 NRAQVAFEQEVLEILERL 449

[Close]

BLAST of Sed0025253 vs. ExPASy TrEMBL
Match: A0A6J1JI27 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111485982 PE=3 SV=1)

HSP 1 Score: 949.9 bits (2454), Expect = 4.7e-273
Identity = 481/553 (86.98%), Postives = 509/553 (92.04%), Query Frame = 0


Query: 1   MEALILKNPN------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKNNNNNV 60
           ME LIL NPN      PF  S+F+  ITPNLC RTLSF+   K KAS  QDKK     NV
Sbjct: 1   MEGLILHNPNPYLSKTPFLHSAFRPQITPNLCCRTLSFSVTCKVKAS--QDKKP---KNV 60

Query: 61  ANKIVLSEAAPPLAAETDQSNG-STETEDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAI 120
           +NKIVLSEAAPPLA ETD +NG +TE E KSGNGSG ++KL+KRLPKR+LG LSNLPLAI
Sbjct: 61  SNKIVLSEAAPPLAEETDNNNGNNTEAEVKSGNGSGLMMKLVKRLPKRILGALSNLPLAI 120

Query: 121 GEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLG 180
           GEMF I+ALMALGTFIDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMYTSTIFL 
Sbjct: 121 GEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFLA 180

Query: 181 MLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVILMGA 240
           ML+LLG+SLMACTYTTQIPLVKVARRWNFLQ+G+AIRKLECS+ILPRASVQDLGV+LMGA
Sbjct: 181 MLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGDAIRKLECSEILPRASVQDLGVVLMGA 240

Query: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVG 300
           GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAG+FRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVVG 300

Query: 301 DVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVN 360
           DVL PSG LSKPTEAFNTEVHVN FYMDYYDSGEVKQFH+DLSLFDLNGKEVMRKTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISVN 360

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420

Query: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDI+G+KIEI+DAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPGV 480

Query: 481 PVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEI 540
           PVVYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAKVEFP+EID LLD+VPEI
Sbjct: 481 PVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPEI 540

Query: 541 IEPSRNELINNDA 547
           IEPS N L NNDA
Sbjct: 541 IEPSHNGLNNNDA 548

[Close]

BLAST of Sed0025253 vs. ExPASy TrEMBL
Match: A0A6J1EUQ2 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437776 PE=3 SV=1)

HSP 1 Score: 941.8 bits (2433), Expect = 1.3e-270
Identity = 479/553 (86.62%), Postives = 505/553 (91.32%), Query Frame = 0


Query: 1   MEALILKNPN------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKNNNNNV 60
           ME LIL NPN      PF  SSF+  ITP LC RTLSF+   K KAS  QDKK     NV
Sbjct: 1   MEGLILHNPNPYLSKTPFLHSSFRPQITPYLCCRTLSFSVTCKVKAS--QDKKP---KNV 60

Query: 61  ANKIVLSEAAPPLAAETD-QSNGSTETEDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAI 120
           +N+IVLSEAAPPLA ETD  S  +TE E K GNGSG ++KL+KRLPKR+LG LSNLPLAI
Sbjct: 61  SNRIVLSEAAPPLAEETDNNSANNTEAEVKPGNGSGLMMKLVKRLPKRILGALSNLPLAI 120

Query: 121 GEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLG 180
           GEMF I+ALMALGTFIDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMYTSTIFL 
Sbjct: 121 GEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFLA 180

Query: 181 MLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVILMGA 240
           ML+LLG+SLMACTYTTQIPLVKVARRWNFLQ+GEAIRKLECS+ILPRASVQDLGV+LMGA
Sbjct: 181 MLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGEAIRKLECSEILPRASVQDLGVVLMGA 240

Query: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVG 300
           GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAG+FRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVVG 300

Query: 301 DVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVN 360
           DVL PSG LSKPTEAFNTEVHVN FYMDYYDSGEVKQFH+DLSLFDLNGKEVMRKTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISVN 360

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420

Query: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDI+G+KIEI+DAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPGV 480

Query: 481 PVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEI 540
           PVVYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAKVEFP+EID LLD+VPEI
Sbjct: 481 PVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPEI 540

Query: 541 IEPSRNELINNDA 547
           IEPS N L NNDA
Sbjct: 541 IEPSHNGLNNNDA 548

[Close]

BLAST of Sed0025253 vs. ExPASy TrEMBL
Match: A0A5D3C5Y2 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00030 PE=3 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 1.6e-265
Identity = 476/557 (85.46%), Postives = 497/557 (89.23%), Query Frame = 0


Query: 1   MEALILKNPN-----------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKN 60
           ME LIL NPN           PF  S F H ITP    +  SF+   K KAS  QDKK  
Sbjct: 1   MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTA-QIRSFSVTCKNKAS--QDKKL- 60

Query: 61  NNNNVANKIVLSEAAPPLAAETDQSNGSTETEDKSGNGSGSIVKLLKRLPKRVLGVLSNL 120
              NV+NKIVLSEAAPPLA E    +G+ E E K GNGSGS  KL+KRLPKR+LG LSNL
Sbjct: 61  --KNVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGS-TKLVKRLPKRILGALSNL 120

Query: 121 PLAIGEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTST 180
           PLAIGEMF I+ALMALGT IDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMY+ST
Sbjct: 121 PLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSST 180

Query: 181 IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVI 240
           IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQ+GE IRKLECSDILPRASVQDLGV+
Sbjct: 181 IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVV 240

Query: 241 LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLN 300
           LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIM GATLSA G+FRGSVTVPQGLN
Sbjct: 241 LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLN 300

Query: 301 FVVGDVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKT 360
           FVVGDVL PSG LSKPTEAFNTEVHVNKFYM+YYDSGEVKQF++DLSLFDLNGKEVMRKT
Sbjct: 301 FVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKT 360

Query: 361 ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD 420
           ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD
Sbjct: 361 ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD 420

Query: 421 SPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT 480
           SP+VKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT
Sbjct: 421 SPNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT 480

Query: 481 DPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDK 540
           DPGVP+VYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFP+E+DRLLDK
Sbjct: 481 DPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDK 540

Query: 541 VPEIIEPSRNELINNDA 547
           VPEIIEPS N+L NNDA
Sbjct: 541 VPEIIEPSHNKLKNNDA 550

[Close]

BLAST of Sed0025253 vs. ExPASy TrEMBL
Match: A0A1S3BZ46 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495188 PE=3 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 1.6e-265
Identity = 476/557 (85.46%), Postives = 497/557 (89.23%), Query Frame = 0


Query: 1   MEALILKNPN-----------PFFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKN 60
           ME LIL NPN           PF  S F H ITP    +  SF+   K KAS  QDKK  
Sbjct: 11  MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTA-QIRSFSVTCKNKAS--QDKKL- 70

Query: 61  NNNNVANKIVLSEAAPPLAAETDQSNGSTETEDKSGNGSGSIVKLLKRLPKRVLGVLSNL 120
              NV+NKIVLSEAAPPLA E    +G+ E E K GNGSGS  KL+KRLPKR+LG LSNL
Sbjct: 71  --KNVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGS-TKLVKRLPKRILGALSNL 130

Query: 121 PLAIGEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTST 180
           PLAIGEMF I+ALMALGT IDQGEAPDFYFQKY EDNP+WGF TWRWIL  GFDHMY+ST
Sbjct: 131 PLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSST 190

Query: 181 IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVI 240
           IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQ+GE IRKLECSDILPRASVQDLGV+
Sbjct: 191 IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVV 250

Query: 241 LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLN 300
           LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIM GATLSA G+FRGSVTVPQGLN
Sbjct: 251 LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLN 310

Query: 301 FVVGDVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKT 360
           FVVGDVL PSG LSKPTEAFNTEVHVNKFYM+YYDSGEVKQF++DLSLFDLNGKEVMRKT
Sbjct: 311 FVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKT 370

Query: 361 ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD 420
           ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD
Sbjct: 371 ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD 430

Query: 421 SPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT 480
           SP+VKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT
Sbjct: 431 SPNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT 490

Query: 481 DPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDK 540
           DPGVP+VYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFP+E+DRLLDK
Sbjct: 491 DPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDK 550

Query: 541 VPEIIEPSRNELINNDA 547
           VPEIIEPS N+L NNDA
Sbjct: 551 VPEIIEPSHNKLKNNDA 560

[Close]

BLAST of Sed0025253 vs. ExPASy TrEMBL
Match: A0A0A0K6S4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075670 PE=3 SV=1)

HSP 1 Score: 909.1 bits (2348), Expect = 9.1e-261
Identity = 468/557 (84.02%), Postives = 493/557 (88.51%), Query Frame = 0


Query: 1   MEALILKNPNP-----------FFQSSFKHPITPNLCFRTLSFNSRIKAKASSPQDKKKN 60
           ME LIL N NP           F  S F H IT     +  SF+   K KAS  QDKK  
Sbjct: 11  MERLILNNLNPSLSKPFLLKTSFLHSVFSHQITLRTA-QIRSFSVTCKNKAS--QDKKL- 70

Query: 61  NNNNVANKIVLSEAAPPLAAETDQSNGSTETEDKSGNGSGSIVKLLKRLPKRVLGVLSNL 120
              N +NKIVLSEAAPPLA E    +G+ E E K GNGS S +KL+KRLPKR+LG LSNL
Sbjct: 71  --KNASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRS-MKLVKRLPKRILGALSNL 130

Query: 121 PLAIGEMFVISALMALGTFIDQGEAPDFYFQKYSEDNPIWGFLTWRWILPFGFDHMYTST 180
           PLAIGEMF I+ALMALGT IDQGEAPDFYFQKY EDNP+WGF  WRWIL  GFDHMY+ST
Sbjct: 131 PLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFDHMYSST 190

Query: 181 IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQTGEAIRKLECSDILPRASVQDLGVI 240
           IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQ+GE IRKLECSDILPRASVQDLGV+
Sbjct: 191 IFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVV 250

Query: 241 LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGNFRGSVTVPQGLN 300
           LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIM GATLSA G+FRGSVTVPQGLN
Sbjct: 251 LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLN 310

Query: 301 FVVGDVLKPSGSLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHTDLSLFDLNGKEVMRKT 360
           FVVGDVL PSG L+KPTEAFNTEVHVNKFYM+YYDSGE+KQF++DLSLFDLNGKEVMRKT
Sbjct: 311 FVVGDVLNPSGFLAKPTEAFNTEVHVNKFYMNYYDSGEIKQFYSDLSLFDLNGKEVMRKT 370

Query: 361 ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVD 420
           ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDV+
Sbjct: 371 ISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVN 430

Query: 421 SPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT 480
           SPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT
Sbjct: 431 SPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKT 490

Query: 481 DPGVPVVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPQEIDRLLDK 540
           DPGVP+VYAGFGALMLTTCVSYLSHSQ+WAIQDGTVVIVGGKTNRAKVEFP+E+DRLLDK
Sbjct: 491 DPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDK 550

Query: 541 VPEIIEPSRNELINNDA 547
           VPEIIEPS N+L NNDA
Sbjct: 551 VPEIIEPSYNKLKNNDA 560

[Close]

BLAST of Sed0025253 vs. TAIR 10
Match: AT1G49380.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 732.6 bits (1890), Expect = 2.3e-211
Identity = 366/515 (71.07%), Postives = 430/515 (83.50%), Query Frame = 0


Query: 25  LCFRTLSFNSRIKAKASSPQD--KKKNNNNNVANKIVLSEAAPPLAAETDQS--NGSTET 84
           LC RT + +     K   PQD  ++ ++N N+   I LS++APP+  ET      G    
Sbjct: 25  LC-RTRNVSLITNCKLQKPQDGNQRSSSNRNLTKTISLSDSAPPVTEETGDGIVKGGGNG 84

Query: 85  EDKSGNGSGSIVKLLKRLPKRVLGVLSNLPLAIGEMFVISALMALGTFIDQGEAPDFYFQ 144
               G+G G +   LK LP++VL VLSNLPLAI EMF I+ALMALGT I+QGE PDFYFQ
Sbjct: 85  GGGGGDGRGGL-GFLKILPRKVLSVLSNLPLAITEMFTIAALMALGTVIEQGETPDFYFQ 144

Query: 145 KYSEDNPIWGFLTWRWILPFGFDHMYTSTIFLGMLALLGISLMACTYTTQIPLVKVARRW 204
           KY EDNP+ GF TWRWI   G DHMY++ IFLGML LL  SLMACTYTTQIPLVKVARRW
Sbjct: 145 KYPEDNPVLGFFTWRWISTLGLDHMYSAPIFLGMLVLLAASLMACTYTTQIPLVKVARRW 204

Query: 205 NFLQTGEAIRKLECSDILPRASVQDLGVILMGAGYEVFIKGPTLYAFKGLAGRFAPIGVH 264
           +F+++ EAI+K E +D LPRAS+QDLG+ILMG G+EVF+KGP+LYAFKGLAGRFAPIGVH
Sbjct: 205 SFMKSDEAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKGPSLYAFKGLAGRFAPIGVH 264

Query: 265 LAMLLIMGGATLSAAGNFRGSVTVPQGLNFVVGDVLKPSGSLSKPTEAFNTEVHVNKFYM 324
           +AMLLIM G TLSA G+FRGSVTVPQGLNFV+GDVL P G  S PT+AFNTEVHVN+F M
Sbjct: 265 IAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGFFSIPTDAFNTEVHVNRFTM 324

Query: 325 DYYDSGEVKQFHTDLSLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDE 384
           DYYDSGEV QFH+DLSL DLNGKEV+RKTISVN+PLRYGG T+YQTDW FSALQ+ K+ E
Sbjct: 325 DYYDSGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGVTVYQTDWSFSALQVTKDGE 384

Query: 385 GPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRR 444
           GPFNLA+AP+KINGDKKLYGTFLPVGD ++P+VKGISMLARDLQSIV+YD +GKF G+RR
Sbjct: 385 GPFNLAMAPIKINGDKKLYGTFLPVGDTNAPNVKGISMLARDLQSIVVYDLDGKFAGIRR 444

Query: 445 PSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPVVYAGFGALMLTTCVSYLSHSQIWAI 504
           PSS+LPI+ING+KI I DAIGSTGLELKTDPGVPVVYAGFGALMLTTC+SYLSHSQIWA+
Sbjct: 445 PSSKLPIEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCISYLSHSQIWAL 504

Query: 505 QDGTVVIVGGKTNRAKVEFPQEIDRLLDKVPEIIE 536
           Q+GT ++VGGKTNRAK +FP +++RLLD+VPE+I+
Sbjct: 505 QNGTALVVGGKTNRAKNQFPDDMNRLLDQVPELIK 537

The following BLAST results are available for this feature:

BLAST of Sed0025253 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988731.1	9.6e-273	86.98	cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita maxima]	[more]
XP_023530089.1	3.7e-272	86.62	cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG7022426.1	2.0e-270	86.62	Cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita argyrosperma subs...	[more]
XP_022931609.1	2.6e-270	86.62	cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita moschata]	[more]
XP_008454876.1	3.3e-265	85.46	PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo]	[more]

BLAST of Sed0025253 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIA4	3.2e-210	71.07	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q75KA9	5.8e-204	70.18	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa subsp. japon...	[more]
Q8GTZ9	1.2e-111	43.27	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Chlamydomonas reinhardtii...	[more]
B1WRN9	2.0e-95	41.27	Cytochrome c biogenesis protein CcsB OS=Crocosphaera subtropica (strain ATCC 511...	[more]
Q3M6F7	4.9e-94	42.47	Cytochrome c biogenesis protein CcsB OS=Trichormus variabilis (strain ATCC 29413...	[more]

BLAST of Sed0025253 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JI27	4.7e-273	86.98	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EUQ2	1.3e-270	86.62	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita moschata OX=366...	[more]
A0A5D3C5Y2	1.6e-265	85.46	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BZ46	1.6e-265	85.46	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0K6S4	9.1e-261	84.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075670 PE=3 SV=1	[more]

BLAST of Sed0025253 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49380.1	2.3e-211	71.07	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007816	ResB-like domain	PFAM	PF05140	ResB	coord: 111..372 e-value: 3.3E-57 score: 194.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..87
IPR023494	Cytochrome c biogenesis protein Ccs1/CcsB/ResB	PANTHER	PTHR31566	CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC	coord: 61..419

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025253.1	Sed0025253.1	mRNA
Sed0025253.2	Sed0025253.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
cellular_component	GO:0016021	integral component of membrane