Sed0019114 (gene) Chayote v1

Overview


Name	Sed0019114
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG08: 4746547 .. 4748698 (+)
RNA-Seq Expression	Sed0019114
Synteny	Sed0019114

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCCGCACGCACTTCCCCTTCCCTTTTAAACCCCCCAACCCCTTAGCCACCAAAAACCAACACACCCACACATCTCTCTTCCATCCAATTTCTCAACCATGGAGCTTCAATTGGGCCTTGCTCTATTCCCCTCCAAACCCTTCGACCTCAACCTCGACTCCCCTTCTTTCGATCTCAAATCAGTCCGTCGTGATAAGCGCTCGCTCGATGTCGACCCCTCTCCGGCGTTTCGTCCAACACTTCCTCTGCTTCTTTGGGATGACCACCCCAATGATGGCCACGATGATGACGCTAACGATCCCAATGCCGTCTCTGATTCGTATGTTTATGCTCTCCACTTTTCTTTTTTTTATTATATGGGGGTTTTCGTTTGTTTGTGTCTTAAATGACGTGAGCATCCATCTCAAAATTAGGAATGAATAATCCCCCCTATTTTTGCCTCTCCCAATTCGGTCTCTTTTTACTGAATGGGTTAGTGGAGCAATGGTTCTATTGTTAGGTTGTAAACCAGTTCAACACCTACATCACAGGTTCGAGCTGAGAATCGATATTTGTCCCACCTCCCTCAATATGTACTAAAAAAAAAAAACTCCGGTCTCTTTTTTATTTTGGGTTTTCGTTTATTTGTGTTAAATATTGTGGACAATGAGAGAAATAGTCGACCGGTTTATAATTTGTTAGAGGTTCTCTCACTCTTCGATATAGAAATGATTCGATACTTTTGAATTTGATTCTATTTTCATTTTTATTAGACTGAATCTCTCTTTTAATTTAATGAATCAATCATGATATTATGTTAGATAAAGTAGACATCGATTTCATAATCAATCAATGATCTCGTAGATTCAATGATTTGATTTGACAGGGAGGAGGAAGAGGAAGAACAAGAGGATGGGCTAGTGGGATGGCCGCCGCTGAAGAAGAGGAGGAAGATGCTTTTTATGCAGAAGCGCGGCGGACGGGTGGCGGTGATACGGCGACCGGCAGTGGAGAATGGCGGCGGCGGGTTTTACAGAGAGTTGAATTCGAATTCGCGATACGTGAAGGTGAAGATGGAGGGAGTTGGAATTGCTAGGAAGGTTGATTTGGGCCAGTACCAATGTTTTGATCTGCTGAAAGCCACTTTGATGAACATGTTTGGTGAGATTTGGTTTCTTATTCTTTTTCGGAATAGTGAATTCCGGATTGGTGTGAGTTTGTTCTGATTTTGGAGTTGTTTGGAAACAGATGAGACGGATTCCGACTCTTACAGACTCACCTACCAGGATATCAACGGTGATTGGTTACTTGCTGAGGATGTAACTTGGAGGTAAAGCAAAATACTCACAAGATTAACAAAAGAAAATTAAAATAAGGAGAAAAAAAGTACTTTTTTTAGTGTCTACATTTAAGCTATAATTTTAATTTGAACCCATATTTCAATAATACTTATTTTTAGTTTCAAAATAATAAAATTATACAACGTAATGTTATTTAAAACGATGATCATATTAATTTTAAATTTCAATATATTAATGAAAGAATTATTTTAGTTTTCACAAAAAATTAATTTTTTTTTAAAAAAAGTAAGTATAAAAAACTTAAAAGAATACATTAGGGTGAAAATTGAATATTATTGAAATATTAAATATAATTCAATGGATCGATGACGCGATTAATTATTTGATTTGATGTTAATCTACTTTATCTCCAAAAATATATTAATTATAAAAAATGTTTCAGTTAAAATTTAGAAATCAAATTGAACCTAGATCTAGACTAAAAATATAATTTTCAGTACAAATAAAGAGCCATTTTGAAACTTTATAGGGAATGTGAAAAGGTGTTCTAAAAGTTGTACTGTGTGTTTTTGTTTTGTGACAGTAATTTCAAGGGAGCCGTACAGCGGATCAAATTAGAGAAGAACAATGGCTGATTGGGGTCAGAGAATCAGATGCTATCTAATTAAATAGATTTCTATGTTTTCTTTTTGTTAGCTCTTCAAAGTTATAATGACTGTATGTAATATGATAATATGGAAAAAACCTTAGCTATGAATCATTATCTTACTTTTTTTTTCTTACCTAATCTGTTTTTGTTAGGTAAAAAAACGTTATGCGAAATTAAAGATACGAGTTAGTAAATCAATTACATGGCTTCTTCTATGTAGAC

mRNA sequence

CACCCGCACGCACTTCCCCTTCCCTTTTAAACCCCCCAACCCCTTAGCCACCAAAAACCAACACACCCACACATCTCTCTTCCATCCAATTTCTCAACCATGGAGCTTCAATTGGGCCTTGCTCTATTCCCCTCCAAACCCTTCGACCTCAACCTCGACTCCCCTTCTTTCGATCTCAAATCAGTCCGTCGTGATAAGCGCTCGCTCGATGTCGACCCCTCTCCGGCGTTTCGTCCAACACTTCCTCTGCTTCTTTGGGATGACCACCCCAATGATGGCCACGATGATGACGCTAACGATCCCAATGCCGTCTCTGATTCGGAGGAGGAAGAGGAAGAACAAGAGGATGGGCTAGTGGGATGGCCGCCGCTGAAGAAGAGGAGGAAGATGCTTTTTATGCAGAAGCGCGGCGGACGGGTGGCGGTGATACGGCGACCGGCAGTGGAGAATGGCGGCGGCGGGTTTTACAGAGAGTTGAATTCGAATTCGCGATACGTGAAGGTGAAGATGGAGGGAGTTGGAATTGCTAGGAAGGTTGATTTGGGCCAGTACCAATGTTTTGATCTGCTGAAAGCCACTTTGATGAACATGTTTGATGAGACGGATTCCGACTCTTACAGACTCACCTACCAGGATATCAACGGTGATTGGTTACTTGCTGAGGATGTAACTTGGAGTAATTTCAAGGGAGCCGTACAGCGGATCAAATTAGAGAAGAACAATGGCTGATTGGGGTCAGAGAATCAGATGCTATCTAATTAAATAGATTTCTATGTTTTCTTTTTGTTAGCTCTTCAAAGTTATAATGACTGTATGTAATATGATAATATGGAAAAAACCTTAGCTATGAATCATTATCTTACTTTTTTTTTCTTACCTAATCTGTTTTTGTTAGGTAAAAAAACGTTATGCGAAATTAAAGATACGAGTTAGTAAATCAATTACATGGCTTCTTCTATGTAGAC

Coding sequence (CDS)

ATGGAGCTTCAATTGGGCCTTGCTCTATTCCCCTCCAAACCCTTCGACCTCAACCTCGACTCCCCTTCTTTCGATCTCAAATCAGTCCGTCGTGATAAGCGCTCGCTCGATGTCGACCCCTCTCCGGCGTTTCGTCCAACACTTCCTCTGCTTCTTTGGGATGACCACCCCAATGATGGCCACGATGATGACGCTAACGATCCCAATGCCGTCTCTGATTCGGAGGAGGAAGAGGAAGAACAAGAGGATGGGCTAGTGGGATGGCCGCCGCTGAAGAAGAGGAGGAAGATGCTTTTTATGCAGAAGCGCGGCGGACGGGTGGCGGTGATACGGCGACCGGCAGTGGAGAATGGCGGCGGCGGGTTTTACAGAGAGTTGAATTCGAATTCGCGATACGTGAAGGTGAAGATGGAGGGAGTTGGAATTGCTAGGAAGGTTGATTTGGGCCAGTACCAATGTTTTGATCTGCTGAAAGCCACTTTGATGAACATGTTTGATGAGACGGATTCCGACTCTTACAGACTCACCTACCAGGATATCAACGGTGATTGGTTACTTGCTGAGGATGTAACTTGGAGTAATTTCAAGGGAGCCGTACAGCGGATCAAATTAGAGAAGAACAATGGCTGA

Protein sequence

MELQLGLALFPSKPFDLNLDSPSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWDDHPNDGHDDDANDPNAVSDSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRPAVENGGGGFYRELNSNSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDSYRLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNNG

Homology

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BLAST of Sed0019114 vs. NCBI nr
Match: XP_038879327.1 (auxin-responsive protein IAA29-like [Benincasa hispida])

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-73
Identity = 155/220 (70.45%), Postives = 177/220 (80.45%), Query Frame = 0


Query: 1   MELQLGLALFPS---KPFDLNL--DSP----SFDLKSVRRDKRSLDVDPSPAFRPTLPLL 60
           MELQLGLAL P+   KPFDLN   ++P     FD  S+   KRS D + S AFR TLPLL
Sbjct: 3   MELQLGLALTPTNPIKPFDLNTHHNNPHNPLCFDFDSITHKKRSRDFNHSAAFRRTLPLL 62

Query: 61  LWDDHPNDGHDDDANDPNAVSDSE-EEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVI 120
           LW+DHPNDG DDD+NDP++ S ++ +EEEE+E+GLVGWPPLKKRRK LFM+K  GR AVI
Sbjct: 63  LWNDHPNDGDDDDSNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMKKHVGRAAVI 122

Query: 121 RRPAVENGGGGFYRELNSN-SRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETD 180
           RRP VEN GGGFYR LNSN SRYVKVKMEGVGIARKVDL Q+  FD L+ATLMNMFDETD
Sbjct: 123 RRPMVEN-GGGFYRGLNSNYSRYVKVKMEGVGIARKVDLSQHHSFDALRATLMNMFDETD 182

Query: 181 SDSYRLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNNG 210
           SD YRLTYQ+I+GDWLLAE+VTW NF G VQR+KLEK +G
Sbjct: 183 SDDYRLTYQNIDGDWLLAENVTWRNFIGIVQRMKLEKKSG 221

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BLAST of Sed0019114 vs. NCBI nr
Match: KAG7023504.1 (Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-68
Identity = 145/216 (67.13%), Postives = 160/216 (74.07%), Query Frame = 0


Query: 1   MELQLGLALF---PSKPFDLNLDS---PSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWD 60
           MELQL L LF   P+KPFDLN      P  D  S+ R KR LD+DPS AFR TLPLLLW+
Sbjct: 3   MELQLSLGLFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLLWN 62

Query: 61  DHPNDGHDDDANDPNAVSDSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRPA 120
           DHPN+G DD  N  +A S+  +  EEQE  LVGWPPLKKRRK LF+QKR GR   IRRPA
Sbjct: 63  DHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIRRPA 122

Query: 121 VENGGGGFYRELNS-NSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDSY 180
            EN  GG YRELNS NSRYVKVKMEGVGI RKVD+ Q+ C D L+ATLMNMFD+ DSD Y
Sbjct: 123 AEN-DGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDSDGY 182

Query: 181 RLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNNG 210
            LTYQD +GDWLLAEDVTW +F   VQRIKLEKN G
Sbjct: 183 NLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 217

[Close]

BLAST of Sed0019114 vs. NCBI nr
Match: XP_022960765.1 (uncharacterized protein LOC111461467 isoform X2 [Cucurbita moschata])

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-68
Identity = 145/214 (67.76%), Postives = 161/214 (75.23%), Query Frame = 0


Query: 1   MELQLGLALF---PSKPFDLNLDS---PSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWD 60
           MELQL LALF   P+KPFDLN      P  D  S+ R KR LD+DPS AFR TLPLLLW+
Sbjct: 3   MELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLLWN 62

Query: 61  DHPNDGHDDDANDPNAVSDSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRPA 120
           DHPN+G DD  N  +A S+  +  EEQE  LVGWPPLKKRRK LF+QKR GR   IRRPA
Sbjct: 63  DHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIRRPA 122

Query: 121 VENGGGGFYRELNS-NSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDSY 180
           +EN  GG YRELNS NSRYVKVKMEGVGI RKVD+ Q+ C D L+ATLMNMFD+ DSD Y
Sbjct: 123 MEN-DGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDSDGY 182

Query: 181 RLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKN 208
            LTYQD +GDWLLAEDVTW +F   VQRIKLEKN
Sbjct: 183 NLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKN 215

[Close]

BLAST of Sed0019114 vs. NCBI nr
Match: XP_023515749.1 (uncharacterized protein LOC111779818 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 2.2e-68
Identity = 147/215 (68.37%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 1   MELQLGLALF---PSKPFDLNLDS---PSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWD 60
           MELQL LALF   P+KPFDLN      P FD  S+ R KR LD+DPS AFR TLPLLLW+
Sbjct: 3   MELQLSLALFPTNPTKPFDLNTHHRALPCFDFDSISRKKRPLDIDPSSAFRRTLPLLLWN 62

Query: 61  DHPNDGHDDDANDPNAVSDSE-EEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRP 120
           DHPN+  DDD NDPN+ S +     EEQE  LVGWPPLKKRRK LF+QKR GR   IRRP
Sbjct: 63  DHPNN-DDDDPNDPNSASSNHPNNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIRRP 122

Query: 121 AVENGGGGFYRELN-SNSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDS 180
           A EN  GG YRELN +NSRYVKVKMEGVGI RKVD+ Q+ C D L+ATLMNMFD+ DSD 
Sbjct: 123 ATEN-DGGVYRELNPNNSRYVKVKMEGVGIGRKVDVRQHHCLDALRATLMNMFDKPDSDG 182

Query: 181 YRLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKN 208
           Y LTYQD +GDWLLAEDVTW +F   VQRIKLEKN
Sbjct: 183 YNLTYQDTDGDWLLAEDVTWRDFIQTVQRIKLEKN 215

[Close]

BLAST of Sed0019114 vs. NCBI nr
Match: KAG6589834.1 (Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 269.6 bits (688), Expect = 2.2e-68
Identity = 144/216 (66.67%), Postives = 160/216 (74.07%), Query Frame = 0


Query: 1   MELQLGLALF---PSKPFDLNLDS---PSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWD 60
           MELQL L LF   P+KPFDLN      P  D  S+ R +R LD+DPS AFR TLPLLLW+
Sbjct: 3   MELQLSLGLFPTNPTKPFDLNTHHRALPCLDFDSISRKRRPLDIDPSSAFRRTLPLLLWN 62

Query: 61  DHPNDGHDDDANDPNAVSDSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRPA 120
           DHPN+G DD  N  +A S+  +  EEQE  LVGWPPLKKRRK LF+QKR GR   IRRPA
Sbjct: 63  DHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIRRPA 122

Query: 121 VENGGGGFYRELNS-NSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDSY 180
            EN  GG YRELNS NSRYVKVKMEGVGI RKVD+ Q+ C D L+ATLMNMFD+ DSD Y
Sbjct: 123 TEN-DGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDSDGY 182

Query: 181 RLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNNG 210
            LTYQD +GDWLLAEDVTW +F   VQRIKLEKN G
Sbjct: 183 NLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 217

[Close]

BLAST of Sed0019114 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 72/241 (29.88%), Postives = 103/241 (42.74%), Query Frame = 0


Query: 1   MELQLGLALFPSKP------FDLNLDSPSFDLKSVRRDKR-------SLDVDPSPAFRPT 60
           MEL LGL+L P K       FDLN         S    ++        L       + P 
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPK 60

Query: 61  LPLLLWDDHPNDGHDDDANDPNAVSDSEEEEEEQEDGLVGWPPLK--------------K 120
             L   +  PN+  +D     +++   +EEE  +   +VGWPP+K              +
Sbjct: 61  QRLFALNGQPNEEDEDPLESESSIVYDDEEENSE---VVGWPPVKTCMIKYGSYHHRHIR 120

Query: 121 RRKMLFMQKRGGRVAV----IRRPAVENGGGGFYRELNS-NSRYVKVKMEGVGIARKVDL 180
                    RG R+      I  P     G      ++S +S YVKVKM+GV IARKVD+
Sbjct: 121 NHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDI 180

Query: 181 GQYQCFDLLKATLMNMFDE-----TDSDSYRLTYQDINGDWLLAEDVTWSNFKGAVQRIK 205
             +  ++ L  +L+ MF E      +  +Y  T+Q   GDWLL  DVTW  F  +V RI 
Sbjct: 181 KLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRIS 238

[Close]

BLAST of Sed0019114 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 47/150 (31.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 85  LVGWPPLKKRRKMLFMQKRGGRVAVIRRPAVENGGGGFYRELNS----NSRYVKVKMEGV 144
           +VGWPP++  R    + +   + +    P +E          +S    NS +VKV M+G+
Sbjct: 89  VVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 148

Query: 145 GIARKVDLGQYQCFDLLKATLMNMF---------DETD-------------SDSYRLTYQ 204
            I RK+DL  ++C++ L  TL  MF          ETD             S    LTY+
Sbjct: 149 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 208

Query: 205 DINGDWLLAEDVTWSNFKGAVQRIKLEKNN 209
           D  GDW+L  DV W  F G+V+R+++ K +
Sbjct: 209 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of Sed0019114 vs. ExPASy Swiss-Prot
Match: Q5VRR0 (Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA20 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-11
Identity = 53/155 (34.19%), Postives = 71/155 (45.81%), Query Frame = 0


Query: 59  DGHDDDANDPNAVSDSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRPAVENG 118
           D  +DD N      DS+ E   +   LVGWPP+    K L  ++ GG             
Sbjct: 53  DDDNDDGNGRGGDGDSDGEMGNKRRKLVGWPPV----KCLHRRRDGG------------C 112

Query: 119 GGGFYRELNSNSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDS------ 178
           GGG          YVKVKMEG+ I RK+DL     +  L  TL  MF  T+ +       
Sbjct: 113 GGG----------YVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRR 172

Query: 179 ---YRLTYQDINGDWLLAEDVTWSNFKGAVQRIKL 205
              Y +TY+D  GDW+   DV W  F  +V+R+K+
Sbjct: 173 RHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKI 181

[Close]

BLAST of Sed0019114 vs. ExPASy Swiss-Prot
Match: Q75GB1 (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 48/164 (29.27%), Postives = 71/164 (43.29%), Query Frame = 0


Query: 70  AVSDSEEEEEEQED--------------GLVGWPPLKKRRKMLFMQKRGGRVAVIRRPAV 129
           A +  E+E+ E+ED               +VGWPP++  RK         ++   +  A 
Sbjct: 88  AAAGEEDEDAEEEDKKVAAAPQAPAAKAQVVGWPPIRSYRKNTMAT---NQLKSSKEDAE 147

Query: 130 ENGGGGFYRELNSNSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMF---------- 189
              G GF         YVKV M+G    RKVDL  Y+ +  L   L  MF          
Sbjct: 148 AKQGQGFL--------YVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGL 207

Query: 190 -DETDSDSYRLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNN 209
            +      Y LTY+D +GDW+L  DV W  F  + +R+++ K +
Sbjct: 208 SESRKDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGS 240

[Close]

BLAST of Sed0019114 vs. ExPASy Swiss-Prot
Match: Q6K846 (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 46/153 (30.07%), Postives = 70/153 (45.75%), Query Frame = 0


Query: 66  NDPNAVSDSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRPAVENGGGGFYRE 125
           +D +  + S+++   ++  +VGWPP+   R+                       GG    
Sbjct: 57  DDGSCCNTSDDDCRRRKKTVVGWPPVSSARRAC---------------------GG---- 116

Query: 126 LNSNSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMF--------------DETDSD 185
               + YVKVK EG  I RKVDL  +  +D L ATL  MF              D  D+ 
Sbjct: 117 ----ANYVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAA 176

Query: 186 SYRLTYQDINGDWLLAEDVTWSNFKGAVQRIKL 205
              +TY+D +GDW+L  DV W +F  +V+R+K+
Sbjct: 177 GPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKI 180

[Close]

BLAST of Sed0019114 vs. ExPASy TrEMBL
Match: A0A6J1HA19 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461467 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.8e-69
Identity = 145/214 (67.76%), Postives = 161/214 (75.23%), Query Frame = 0


Query: 1   MELQLGLALF---PSKPFDLNLDS---PSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWD 60
           MELQL LALF   P+KPFDLN      P  D  S+ R KR LD+DPS AFR TLPLLLW+
Sbjct: 3   MELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLLWN 62

Query: 61  DHPNDGHDDDANDPNAVSDSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRPA 120
           DHPN+G DD  N  +A S+  +  EEQE  LVGWPPLKKRRK LF+QKR GR   IRRPA
Sbjct: 63  DHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIRRPA 122

Query: 121 VENGGGGFYRELNS-NSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDSY 180
           +EN  GG YRELNS NSRYVKVKMEGVGI RKVD+ Q+ C D L+ATLMNMFD+ DSD Y
Sbjct: 123 MEN-DGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDSDGY 182

Query: 181 RLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKN 208
            LTYQD +GDWLLAEDVTW +F   VQRIKLEKN
Sbjct: 183 NLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKN 215

[Close]

BLAST of Sed0019114 vs. ExPASy TrEMBL
Match: A0A6J1JF88 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485214 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.1e-68
Identity = 146/215 (67.91%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 1   MELQLGLALF---PSKPFDLNLDS---PSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWD 60
           MELQLGLALF   P+KPF LN      P  D  S+   KR LD+DPS AFR TLPLLLW+
Sbjct: 81  MELQLGLALFPTNPTKPFHLNTHHRALPCLDFDSISGKKRPLDIDPSSAFRRTLPLLLWN 140

Query: 61  DHPNDGHDDDANDPNAVSDSE-EEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRP 120
           DHPNDG DDD NDPN+ S +  +  +EQE  LVGWPPLKKRRK LF+QKR  R  VIRRP
Sbjct: 141 DHPNDG-DDDPNDPNSASSNHPDNPKEQEIELVGWPPLKKRRKTLFVQKRIRRAVVIRRP 200

Query: 121 AVENGGGGFYRELNS-NSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDS 180
           A+EN GGG +RELNS NS YVKVKMEGVGI RKVD+ Q+ CFD L+ATLMNMFD+ DSD 
Sbjct: 201 AMEN-GGGVHRELNSNNSLYVKVKMEGVGIGRKVDIRQHHCFDALRATLMNMFDKPDSDG 260

Query: 181 YRLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKN 208
           Y LTYQD +GDWLLA+DVTW +F   VQRIKLEKN
Sbjct: 261 YNLTYQDTDGDWLLADDVTWRDFIRTVQRIKLEKN 293

[Close]

BLAST of Sed0019114 vs. ExPASy TrEMBL
Match: A0A1S3B8T8 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.5e-67
Identity = 147/219 (67.12%), Postives = 174/219 (79.45%), Query Frame = 0


Query: 1   MELQLGLALFPS---KPFDLNL--DSP-SFDLKSVRRDKRSLDVDPSPAF-RPTLPLLLW 60
           MELQLGLAL P+   KPFDLN   ++P S    S+   KRS  +D SP F R TLPLLLW
Sbjct: 3   MELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLLLW 62

Query: 61  DDHPNDGHDDDANDPNAVS--DSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIR 120
           +DHPNDG  DD+NDP + S  DS+EEEEE+E+GLVGWPPLKKRRK LFM++  GR AVIR
Sbjct: 63  NDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 122

Query: 121 RPAVENGGGGFYRELN-SNSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDS 180
           RPAV+N  GGF+R L+ +NSRYVKVKMEGVGIARKVDL ++  FD L+ATLMNMFDET+S
Sbjct: 123 RPAVKN-DGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETNS 182

Query: 181 DSYRLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNNG 210
           + YRLT+Q+ NG+WLLAE+VTW NF G VQRIKLEK +G
Sbjct: 183 EGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220

[Close]

BLAST of Sed0019114 vs. ExPASy TrEMBL
Match: A0A6J1I2H3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111469303 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 5.0e-66
Identity = 144/216 (66.67%), Postives = 163/216 (75.46%), Query Frame = 0


Query: 1   MELQLGLALFPSKPFDLNLD------SPSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWD 60
           MELQLGL+L P+KPFDLN        +   DL S  R KR L VDPS AFR TLPLLLW+
Sbjct: 1   MELQLGLSLIPAKPFDLNNSLLLHDTASCLDLTSTIRKKRPLHVDPSSAFRRTLPLLLWN 60

Query: 61  DHPNDGHDDDANDPNAVS-DSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRP 120
           DHPN+G DDD NDP++ S DS+E+E+E+++ LVGWPPLKKR+    MQKR GR     RP
Sbjct: 61  DHPNNGDDDD-NDPHSASNDSDEDEDEEDNRLVGWPPLKKRKTRSLMQKRRGR----GRP 120

Query: 121 AVENGGGGFYRELNSNSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMFDETDSDSY 180
           AV NGGG      NSNSRYVKVKMEGVGI RKVDL QY CFD L+ATLM MFD+ D DS+
Sbjct: 121 AV-NGGG---LNWNSNSRYVKVKMEGVGIGRKVDLSQYHCFDQLRATLMKMFDKMDPDSH 180

Query: 181 RLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNNG 210
           RLTYQDI+GDWLLA+DVTW NF G VQRIKLEKN G
Sbjct: 181 RLTYQDIDGDWLLADDVTWRNFIGTVQRIKLEKNRG 207

[Close]

BLAST of Sed0019114 vs. ExPASy TrEMBL
Match: A0A6J1F6G3 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111441247 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.7e-64
Identity = 146/221 (66.06%), Postives = 161/221 (72.85%), Query Frame = 0


Query: 1   MELQLGLALFPSKPFDLNLD------SPSFDLKSVRRDKRSLDVDPSPAFRPTLPLLLWD 60
           MELQLGL+L P+KPFDLN        +   DL S  R KR L VDPS AFR TLPLLLW+
Sbjct: 1   MELQLGLSLIPAKPFDLNNSLLLHDTASCLDLNSTIRKKRPLHVDPSLAFRRTLPLLLWN 60

Query: 61  DHPNDGHDDDANDPNAVS-DSEEEEEEQEDGLVGWPPLKKRRKMLFMQKRGGRVAVIRRP 120
           DHPN+G DDD NDP++ S DS+EEEEE+++ LVGWPPLKKR+    MQKR GR     RP
Sbjct: 61  DHPNNGDDDD-NDPHSASNDSDEEEEEEDNRLVGWPPLKKRKTRSLMQKRRGR----GRP 120

Query: 121 AVENGGGGFYRELNSNSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNMF-----DET 180
           AV NGGG      NSNSRYVKVKMEGVGI RKVDL QY CFD L+ATLM MF     DE 
Sbjct: 121 AV-NGGG---LNWNSNSRYVKVKMEGVGIGRKVDLSQYHCFDELRATLMKMFGYLETDEM 180

Query: 181 DSDSYRLTYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNNG 210
           D D  RLTYQDI+GDWLLA+DVTW NF G VQRIKLEKN G
Sbjct: 181 DPDGQRLTYQDIDGDWLLADDVTWRNFIGTVQRIKLEKNRG 212

[Close]

BLAST of Sed0019114 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 84.7 bits (208), Expect = 9.4e-17
Identity = 72/241 (29.88%), Postives = 103/241 (42.74%), Query Frame = 0


Query: 1   MELQLGLALFPSKP------FDLNLDSPSFDLKSVRRDKR-------SLDVDPSPAFRPT 60
           MEL LGL+L P K       FDLN         S    ++        L       + P 
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPK 60

Query: 61  LPLLLWDDHPNDGHDDDANDPNAVSDSEEEEEEQEDGLVGWPPLK--------------K 120
             L   +  PN+  +D     +++   +EEE  +   +VGWPP+K              +
Sbjct: 61  QRLFALNGQPNEEDEDPLESESSIVYDDEEENSE---VVGWPPVKTCMIKYGSYHHRHIR 120

Query: 121 RRKMLFMQKRGGRVAV----IRRPAVENGGGGFYRELNS-NSRYVKVKMEGVGIARKVDL 180
                    RG R+      I  P     G      ++S +S YVKVKM+GV IARKVD+
Sbjct: 121 NHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDI 180

Query: 181 GQYQCFDLLKATLMNMFDE-----TDSDSYRLTYQDINGDWLLAEDVTWSNFKGAVQRIK 205
             +  ++ L  +L+ MF E      +  +Y  T+Q   GDWLL  DVTW  F  +V RI 
Sbjct: 181 KLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRIS 238

[Close]

BLAST of Sed0019114 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-13
Identity = 47/150 (31.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 85  LVGWPPLKKRRKMLFMQKRGGRVAVIRRPAVENGGGGFYRELNS----NSRYVKVKMEGV 144
           +VGWPP++  R    + +   + +    P +E          +S    NS +VKV M+G+
Sbjct: 89  VVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 148

Query: 145 GIARKVDLGQYQCFDLLKATLMNMF---------DETD-------------SDSYRLTYQ 204
            I RK+DL  ++C++ L  TL  MF          ETD             S    LTY+
Sbjct: 149 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 208

Query: 205 DINGDWLLAEDVTWSNFKGAVQRIKLEKNN 209
           D  GDW+L  DV W  F G+V+R+++ K +
Sbjct: 209 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of Sed0019114 vs. TAIR 10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-13
Identity = 47/150 (31.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 85  LVGWPPLKKRRKMLFMQKRGGRVAVIRRPAVENGGGGFYRELNS----NSRYVKVKMEGV 144
           +VGWPP++  R    + +   + +    P +E          +S    NS +VKV M+G+
Sbjct: 89  VVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 148

Query: 145 GIARKVDLGQYQCFDLLKATLMNMF---------DETD-------------SDSYRLTYQ 204
            I RK+DL  ++C++ L  TL  MF          ETD             S    LTY+
Sbjct: 149 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 208

Query: 205 DINGDWLLAEDVTWSNFKGAVQRIKLEKNN 209
           D  GDW+L  DV W  F G+V+R+++ K +
Sbjct: 209 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of Sed0019114 vs. TAIR 10
Match: AT4G28640.3 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-13
Identity = 47/150 (31.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 85  LVGWPPLKKRRKMLFMQKRGGRVAVIRRPAVENGGGGFYRELNS----NSRYVKVKMEGV 144
           +VGWPP++  R    + +   + +    P +E          +S    NS +VKV M+G+
Sbjct: 89  VVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 148

Query: 145 GIARKVDLGQYQCFDLLKATLMNMF---------DETD-------------SDSYRLTYQ 204
            I RK+DL  ++C++ L  TL  MF          ETD             S    LTY+
Sbjct: 149 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 208

Query: 205 DINGDWLLAEDVTWSNFKGAVQRIKLEKNN 209
           D  GDW+L  DV W  F G+V+R+++ K +
Sbjct: 209 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of Sed0019114 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 )

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11
Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 123 YRELNS----NSRYVKVKMEGVGIARKVDLGQYQCFDLLKATLMNM------FDETDSDS 182
           YR  NS     S YVKV ++G    RK+DL  Y+C+  L + L  +      FD+T  +S
Sbjct: 63  YRRKNSLERTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKES 122

Query: 183 YRL-TYQDINGDWLLAEDVTWSNFKGAVQRIKLEKNN 209
             +  Y+D +GDW+LA DV W  F G+ +R+++ K +
Sbjct: 123 ECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159

The following BLAST results are available for this feature:

BLAST of Sed0019114 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879327.1	1.3e-73	70.45	auxin-responsive protein IAA29-like [Benincasa hispida]	[more]
KAG7023504.1	1.0e-68	67.13	Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022960765.1	1.0e-68	67.76	uncharacterized protein LOC111461467 isoform X2 [Cucurbita moschata]	[more]
XP_023515749.1	2.2e-68	68.37	uncharacterized protein LOC111779818 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6589834.1	2.2e-68	66.67	Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0019114 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WC4	1.3e-15	29.88	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
Q38829	3.1e-12	31.33	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
Q5VRR0	2.0e-11	34.19	Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA20...	[more]
Q75GB1	1.7e-10	29.27	Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17...	[more]
Q6K846	2.2e-10	30.07	Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 P...	[more]

BLAST of Sed0019114 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HA19	4.8e-69	67.76	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461467 PE=3 SV=1	[more]
A0A6J1JF88	3.1e-68	67.91	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485214 PE=3 SV=1	[more]
A0A1S3B8T8	3.5e-67	67.12	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1	[more]
A0A6J1I2H3	5.0e-66	66.67	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111469303 PE=3 SV=1	[more]
A0A6J1F6G3	2.7e-64	66.06	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111441247 PE=3 SV=1	[more]

BLAST of Sed0019114 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	9.4e-17	29.88	indole-3-acetic acid inducible 29	[more]
AT4G28640.1	2.2e-13	31.33	indole-3-acetic acid inducible 11	[more]
AT4G28640.2	2.2e-13	31.33	indole-3-acetic acid inducible 11	[more]
AT4G28640.3	2.2e-13	31.33	indole-3-acetic acid inducible 11	[more]
AT1G15580.1	3.5e-11	37.11	indole-3-acetic acid inducible 5	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 124..179 e-value: 8.8E-9 score: 37.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..84
None	No IPR available	PANTHER	PTHR31734:SF44	AUXIN-RESPONSIVE PROTEIN IAA29	coord: 1..167
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 64..168 e-value: 5.9E-15 score: 55.8
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019114.1	Sed0019114.1	mRNA
Sed0019114.2	Sed0019114.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding