Homology
BLAST of Sed0020235 vs. NCBI nr
Match:
XP_022929794.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita moschata])
HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 685/796 (86.06%), Postives = 739/796 (92.84%), Query Frame = 0
Query: 35 VGGFVAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSV 94
+GGFVAMESR + TL +LADL LVASITK L++SGTRTLQH L IS+ LLLQIL +RSV
Sbjct: 5 IGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILRSRSV 64
Query: 95 HPLKKLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTF 154
HP KLDFFKWCSLSP+++H STYS I RILCRSGYLHEVP LLS+MK+DGV VDSHTF
Sbjct: 65 HPSNKLDFFKWCSLSPNFSHSPSTYSQIFRILCRSGYLHEVPLLLSSMKRDGVDVDSHTF 124
Query: 155 KVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLID 214
KVLLDAFI+SGK DDAL+ILDHMEELGTSLELNTYNSVLVALVRK QVGLALSIFFKL D
Sbjct: 125 KVLLDAFIRSGKFDDALDILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKLFD 184
Query: 215 AFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCG 274
AF+ GGQEG+ A S SFLPNALACNELLVALRKSDMRVEFK VFDKLR IR+FEFNVCG
Sbjct: 185 AFSTGGQEGS-AVPSFSFLPNALACNELLVALRKSDMRVEFKKVFDKLRTIRSFEFNVCG 244
Query: 275 YNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIV 334
YNICIHAFGCWGYLDTSLALFKEMKQ+SLV+ SF PDLCTYNSLIHVLCLVGKV DALIV
Sbjct: 245 YNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFSPDLCTYNSLIHVLCLVGKVNDALIV 304
Query: 335 WEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFK 394
WEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF+PDTIVYNSLLDGLFK
Sbjct: 305 WEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPDTIVYNSLLDGLFK 364
Query: 395 ARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVT 454
AR+V+EACQ FD+MVQEGVRAS WTYNILIDGLFRNGRA ASY+LFCDLKKKGQFVDGVT
Sbjct: 365 ARRVVEACQFFDKMVQEGVRASPWTYNILIDGLFRNGRAEASYTLFCDLKKKGQFVDGVT 424
Query: 455 YSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIR 514
YSII+L LCKEG LE ALQLVEEMEARGF++DL+TVTSLLIAMHKQG+W+ LERLMK+IR
Sbjct: 425 YSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMHKQGQWEGLERLMKHIR 484
Query: 515 EGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTK 574
EGDLVP+VLKWKANMED K Q++K KDYSPLF PK+DL+EIISSRASS+ A +DD+++
Sbjct: 485 EGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRASSV--AKVDDISE 544
Query: 575 NTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSI 634
NTEE+D DNWSSSPH DLLANLA+ST SLQPF+L GQRVQAKG +SFDIDMVNTFLSI
Sbjct: 545 NTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVQAKGDNSFDIDMVNTFLSI 604
Query: 635 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 694
FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLS+FVKKGYF QAWGIFNEMGEKVCPAD
Sbjct: 605 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSAFVKKGYFEQAWGIFNEMGEKVCPAD 664
Query: 695 IATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFE 754
IATYNVIIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMD+VNKLFE
Sbjct: 665 IATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFE 724
Query: 755 QMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIE 814
QM S+GINPDVV+FNTLIEVHSKAGRFKDAY+FLKMMLDSGCSPNHVTDT LDFLGREIE
Sbjct: 725 QMRSSGINPDVVSFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTILDFLGREIE 784
Query: 815 KARYEKASIMRDKNSS 831
KARYEKASIMR+KNSS
Sbjct: 785 KARYEKASIMREKNSS 797
BLAST of Sed0020235 vs. NCBI nr
Match:
KAG7013843.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 684/798 (85.71%), Postives = 741/798 (92.86%), Query Frame = 0
Query: 35 VGGFVAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSV 94
+GGFVAMESR + TL +LADL LVASITK L++SGTRTLQH L IS+ LLLQIL +RSV
Sbjct: 5 IGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILRSRSV 64
Query: 95 HPLKKLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDG--VSVDSH 154
HP KLDFFKWCSLSP+++H STYS I RILCRSGYLHEVP LLS+MK+DG V VDSH
Sbjct: 65 HPSNKLDFFKWCSLSPNFSHSPSTYSQIFRILCRSGYLHEVPLLLSSMKRDGVDVDVDSH 124
Query: 155 TFKVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKL 214
TFKVLLDAFI+SGK D ALEILDHMEELGTSLELNTYNSVLVALVRK QVGLALSIFFKL
Sbjct: 125 TFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKL 184
Query: 215 IDAFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNV 274
DAF+ GGQEG+ A S SFLPNALACNELLVALRKSDMR EFK VFDKLR IR+FEFNV
Sbjct: 185 FDAFSTGGQEGS-AVPSFSFLPNALACNELLVALRKSDMRFEFKKVFDKLRTIRSFEFNV 244
Query: 275 CGYNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDAL 334
CGYNICIHAFGCWGYLDTSLALFKEMKQ+SLV+ SFGPDLCTYNSLIHVLCLVGKV DAL
Sbjct: 245 CGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDAL 304
Query: 335 IVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGL 394
IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF+PDTIVYNSLLDGL
Sbjct: 305 IVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPDTIVYNSLLDGL 364
Query: 395 FKARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDG 454
FKAR+VIEACQ FD+MVQEGVRAS WTYNILIDGLFRNGRA ASY+LFCDLKKKGQFVDG
Sbjct: 365 FKARRVIEACQFFDKMVQEGVRASPWTYNILIDGLFRNGRAEASYTLFCDLKKKGQFVDG 424
Query: 455 VTYSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKY 514
VTYSII+L LCKEG LE ALQLVEEMEARGF++DL+TVTSLLIAMHKQG+W+ LERLMK+
Sbjct: 425 VTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMHKQGQWEGLERLMKH 484
Query: 515 IREGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDV 574
IREGDLVP+VLKWKANMED K Q++K KDYSPLF PK+DL+EIISSRASS+++ ++DD+
Sbjct: 485 IREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRASSVAKVNVDDI 544
Query: 575 TKNTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFL 634
++NTEE+D DNWSSSPH DLLANLA+ST SLQPF+L GQRVQAKG +SFDIDMVNTFL
Sbjct: 545 SENTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVQAKGDNSFDIDMVNTFL 604
Query: 635 SIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCP 694
SIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLS+FVKKGYFHQAWGIFNEMGEKVCP
Sbjct: 605 SIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCP 664
Query: 695 ADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKL 754
ADIATYN+IIQGLGKMGRADLASSVL+KLME+GGYLDIVMYNTL+NALGKAGRMD+VNKL
Sbjct: 665 ADIATYNLIIQGLGKMGRADLASSVLEKLMEKGGYLDIVMYNTLMNALGKAGRMDDVNKL 724
Query: 755 FEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGRE 814
FEQM S+GINPDVV+FNTLIEVHSKAGRFKDAY+FLKMMLDSGCSPNHVTDT LDFLGRE
Sbjct: 725 FEQMRSSGINPDVVSFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTILDFLGRE 784
Query: 815 IEKARYEKASIMRDKNSS 831
IEKARYEKASIMR+KNSS
Sbjct: 785 IEKARYEKASIMREKNSS 801
BLAST of Sed0020235 vs. NCBI nr
Match:
XP_023549441.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1377.8 bits (3565), Expect = 0.0e+00
Identity = 682/796 (85.68%), Postives = 740/796 (92.96%), Query Frame = 0
Query: 35 VGGFVAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSV 94
+GGFVAMESR + TL +LADL LVASITK L++SGTRTLQH L IS+ LLLQIL +RSV
Sbjct: 5 IGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILRSRSV 64
Query: 95 HPLKKLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTF 154
HP KLDFFKWCSLSP+++H ASTYS I R LCRSGYLHEVP +LS+MK+DGV VDSHTF
Sbjct: 65 HPSNKLDFFKWCSLSPNFSHSASTYSQIFRTLCRSGYLHEVPLVLSSMKRDGVDVDSHTF 124
Query: 155 KVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLID 214
KVLLDAFI+SGK D ALEILDHMEELGTSLELNTYNSVLVALVRK QVGLALSIFFKL D
Sbjct: 125 KVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKLFD 184
Query: 215 AFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCG 274
AF+ GGQEG+ A S SFLPNALACNELLVALRKSDMRVEFK VFDKLR IR+FEFNVCG
Sbjct: 185 AFSTGGQEGS-AVPSFSFLPNALACNELLVALRKSDMRVEFKKVFDKLRTIRSFEFNVCG 244
Query: 275 YNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIV 334
YNICIHAFGCWGYLDTSLALFKEMKQ+SLV+ SFGPDLCTYNSLIHVLCLVGKV DALIV
Sbjct: 245 YNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDALIV 304
Query: 335 WEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFK 394
WEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF+PDTIVYNSLLDGLFK
Sbjct: 305 WEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPDTIVYNSLLDGLFK 364
Query: 395 ARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVT 454
AR+VIEACQ FD+MVQEGVRAS WTYNILIDGLFRNGRA ASYSLFCDLKKKGQFVDGVT
Sbjct: 365 ARRVIEACQFFDKMVQEGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVDGVT 424
Query: 455 YSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIR 514
YSII+L LCKEG LE ALQLVEEMEARGF++DL+TVTSLLIAMHKQG+W+ LERLMK+IR
Sbjct: 425 YSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMHKQGQWEGLERLMKHIR 484
Query: 515 EGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTK 574
EGDLVP+VLKWKANMED K Q++K K+YS LF PK+DL+EIISSRASS+++ ++ D+++
Sbjct: 485 EGDLVPNVLKWKANMEDSVKYQKNKRKNYSSLFSPKEDLSEIISSRASSVAKVNVGDISE 544
Query: 575 NTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSI 634
NTEE+D DNWSSSPH DLLANLA+ST SLQPF+L GQRV+AKG +SFDIDMVNTFLSI
Sbjct: 545 NTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVEAKGDNSFDIDMVNTFLSI 604
Query: 635 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 694
FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLS+FVKKGYFHQAWGIFNEMGEKVCPAD
Sbjct: 605 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPAD 664
Query: 695 IATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFE 754
IATYN+IIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMD+VNKLFE
Sbjct: 665 IATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFE 724
Query: 755 QMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIE 814
QM S+GINPDVV+FNTLIEVHSKAGRFKDAY+FLKMMLDSGCSPNHVTDT LDFLGREIE
Sbjct: 725 QMRSSGINPDVVSFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTILDFLGREIE 784
Query: 815 KARYEKASIMRDKNSS 831
KARYEKASI+RDKNSS
Sbjct: 785 KARYEKASIIRDKNSS 799
BLAST of Sed0020235 vs. NCBI nr
Match:
XP_022992119.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita maxima])
HSP 1 Score: 1369.8 bits (3544), Expect = 0.0e+00
Identity = 677/796 (85.05%), Postives = 739/796 (92.84%), Query Frame = 0
Query: 35 VGGFVAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSV 94
+GGFVAMESR + TL +LADL LVASITK L++SGTRTLQH L IS+ LLLQIL +RSV
Sbjct: 5 IGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILRSRSV 64
Query: 95 HPLKKLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTF 154
HP KLDFFKWCSLSP+++H ASTYS I RILCRSGY HEVP LLS+MK+DGV VDSHTF
Sbjct: 65 HPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVDVDSHTF 124
Query: 155 KVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLID 214
KVLLDAFI+SGK D ALEILDHMEELGTSLELNTYNSVLVALVRK QVGLALSIFFKL D
Sbjct: 125 KVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKLFD 184
Query: 215 AFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCG 274
AF+ GGQEG+ A S SFLPNALACNELLVALRKSDMRVEFK VFDKLR IR+FEFNVCG
Sbjct: 185 AFSTGGQEGS-AVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFEFNVCG 244
Query: 275 YNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIV 334
YNICIHAFGCWGYLDTSLALFKEMKQ+SLV+ SFGPDLCTYNSLIHVLCLVGKV DALIV
Sbjct: 245 YNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDALIV 304
Query: 335 WEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFK 394
WEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF+P+TIVYNSLLDGLFK
Sbjct: 305 WEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLDGLFK 364
Query: 395 ARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVT 454
AR+V+EACQ FD+MVQ+GVRAS WTYNILIDGLFRNGRA ASYSLFCDLKKKGQFVDGVT
Sbjct: 365 ARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVDGVT 424
Query: 455 YSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIR 514
YSII+L LCKEG LE ALQLVEEMEARGF++DL+TVTSLLIAM+KQG+W+ LERLMK+IR
Sbjct: 425 YSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLMKHIR 484
Query: 515 EGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTK 574
EGDLVP+VLKWKANMED K Q++K KDYSPLF PK+DL+EIISSRA+S+++ ++DD+++
Sbjct: 485 EGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVDDISE 544
Query: 575 NTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSI 634
NTEE+D DNWSSSPH DLLAN A+ST SLQ F+L GQRVQ+KG +SFDIDMVNTFLSI
Sbjct: 545 NTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSI 604
Query: 635 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 694
FLAKGKLSLACKLF+IFSDMGVNPVRYTYNSMLS+FVKKGYFHQAWGIFNEMGEKVCPAD
Sbjct: 605 FLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPAD 664
Query: 695 IATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFE 754
IATYN+IIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMD+VNKLFE
Sbjct: 665 IATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFE 724
Query: 755 QMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIE 814
QM S+GI PDVV+FNTLIEVHSKAGRFKDAY++LKMMLDSGCSPNHVTDT LDFLGREIE
Sbjct: 725 QMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDFLGREIE 784
Query: 815 KARYEKASIMRDKNSS 831
KARYEKASIMRDKNSS
Sbjct: 785 KARYEKASIMRDKNSS 799
BLAST of Sed0020235 vs. NCBI nr
Match:
XP_022134897.1 (pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] >XP_022134898.1 pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] >XP_022134899.1 pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] >XP_022134900.1 pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia])
HSP 1 Score: 1347.8 bits (3487), Expect = 0.0e+00
Identity = 673/795 (84.65%), Postives = 727/795 (91.45%), Query Frame = 0
Query: 37 GFVAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQH--HLLPISDSLLLQILHNRSV 96
GFVAMESR S+L Q+ADL LVAS+TK L++SGTRTLQH H LP+S+ LLLQIL +RS+
Sbjct: 7 GFVAMESRAMSSLSQMADLLLVASLTKTLSESGTRTLQHHSHSLPLSEPLLLQILRSRSL 66
Query: 97 HPLKKLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTF 156
HP KKL+FF WCSLSP+Y H ASTYS I ILCR+GYLHEVP LLS+MK+DGV+VDSHTF
Sbjct: 67 HPSKKLEFFTWCSLSPNYKHSASTYSRILHILCRAGYLHEVPLLLSSMKRDGVAVDSHTF 126
Query: 157 KVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLID 216
K+LLDAFI SGK D ALEILDHMEELGT LEL+TYNS+L+ALVRK QVGLALSIF KL D
Sbjct: 127 KLLLDAFIGSGKFDAALEILDHMEELGTGLELHTYNSLLLALVRKNQVGLALSIFLKLFD 186
Query: 217 AFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCG 276
AF NGG GTV A SISFLP++LACNELLVALR++DMR+EFK VFDKLR IR FEFN+CG
Sbjct: 187 AFYNGGHVGTV-ADSISFLPSSLACNELLVALRRADMRIEFKKVFDKLREIRGFEFNICG 246
Query: 277 YNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIV 336
YNICIHAFGCWGYLDTSLALFKEMKQKS V++SFGPDLCTYNSLIHVLCLVG+VKDALIV
Sbjct: 247 YNICIHAFGCWGYLDTSLALFKEMKQKSSVSQSFGPDLCTYNSLIHVLCLVGRVKDALIV 306
Query: 337 WEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFK 396
WEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT+IFNEMEYNGF DTIVYNSLLDGLFK
Sbjct: 307 WEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATMIFNEMEYNGFTLDTIVYNSLLDGLFK 366
Query: 397 ARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVT 456
ARKV+E CQLFD+MVQEGVRAS WTYNILIDGLFRNGRAAA YSLFCDLKKKGQFVDGVT
Sbjct: 367 ARKVVEGCQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAAGYSLFCDLKKKGQFVDGVT 426
Query: 457 YSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIR 516
YSI+VL LCKEG LE A+Q VEEME RGFIVDLITV+SLLI MHKQGRWD LERLMK+IR
Sbjct: 427 YSIVVLQLCKEGLLEEAIQSVEEMEVRGFIVDLITVSSLLIGMHKQGRWDGLERLMKHIR 486
Query: 517 EGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTK 576
EGDLVP+VLKWKANMED K QQ+K KDYS LF PK+DLNEIISSRASS+ + DI+ +
Sbjct: 487 EGDLVPNVLKWKANMEDSVKYQQNKRKDYSTLFSPKEDLNEIISSRASSVMKVDINGIFI 546
Query: 577 NTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSI 636
NTEE NWS SPH DLLANLARSTSHS QPF+L +G+RVQAKG +SFDIDMVNTFLSI
Sbjct: 547 NTEE----NWSESPHVDLLANLARSTSHSSQPFSLAQGRRVQAKGANSFDIDMVNTFLSI 606
Query: 637 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 696
FLAKGKLSLACKLFEIFSDMGV+PVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD
Sbjct: 607 FLAKGKLSLACKLFEIFSDMGVSPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 666
Query: 697 IATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFE 756
IATYN+IIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLF+
Sbjct: 667 IATYNMIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFQ 726
Query: 757 QMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIE 816
QM S+GINPDVVTFNTLIEVHSKAGRFKDAY+FLKMMLDSGC+PNHVTDTTLDFLGREIE
Sbjct: 727 QMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCAPNHVTDTTLDFLGREIE 786
Query: 817 KARYEKASIMRDKNS 830
K RYEKASI+RDKNS
Sbjct: 787 KMRYEKASIIRDKNS 796
BLAST of Sed0020235 vs. ExPASy Swiss-Prot
Match:
Q8VZE4 (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana OX=3702 GN=At4g01570 PE=2 SV=1)
HSP 1 Score: 984.2 bits (2543), Expect = 9.2e-286
Identity = 491/780 (62.95%), Postives = 613/780 (78.59%), Query Frame = 0
Query: 51 QLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSVHPLKKLDFFKWC-SLS 110
QL ++ LVAS++K L++SGTR+L + +PIS+ ++LQIL S+ P KKLDFF+WC SL
Sbjct: 26 QLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLR 85
Query: 111 PDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTFKVLLDAFIKSGKIDD 170
P Y H A+ YS I R +CR+G L EVP LL +MK+DGV++D K+LLD+ I+SGK +
Sbjct: 86 PGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFES 145
Query: 171 ALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLIDAFNNGGQEGTVAAAS 230
AL +LD+MEELG L + Y+SVL+ALV+K ++ LALSI FKL++A +N + T
Sbjct: 146 ALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVII 205
Query: 231 ISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCGYNICIHAFGCWGYLD 290
+S+LP +A NELLV LR++DMR EFK VF+KL+ ++ F+F+ YNICIH FGCWG LD
Sbjct: 206 VSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLD 265
Query: 291 TSLALFKEMKQKSLV-TESFGPDLCTYNSLIHVLCLVGKVKDALIVWEELKGSGHEPDAF 350
+L+LFKEMK++S V SFGPD+CTYNSLIHVLCL GK KDALIVW+ELK SGHEPD
Sbjct: 266 AALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNS 325
Query: 351 TYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFKARKVIEACQLFDRM 410
TYR++IQGCCKSYRMDDA I+ EM+YNGF+PDTIVYN LLDG KARKV EACQLF++M
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 411 VQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVTYSIIVLHLCKEGWL 470
VQEGVRAS WTYNILIDGLFRNGRA A ++LFCDLKKKGQFVD +T+SI+ L LC+EG L
Sbjct: 386 VQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 471 EGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIREGDLVPSVLKWKAN 530
EGA++LVEEME RGF VDL+T++SLLI HKQGRWD E+LMK+IREG+LVP+VL+W A
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAG 505
Query: 531 MEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTKNTEERDADNWSSSP 590
+E K QSK KDY+P+F K +I+S S A ++V+ + D WSSSP
Sbjct: 506 VEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVS----PMEDDPWSSSP 565
Query: 591 HADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSIFLAKGKLSLACKLF 650
+ D LA + F L +GQRV+AK DSFD+DM+NTFLSI+L+KG LSLACKLF
Sbjct: 566 YMD---QLAHQRNQPKPLFGLARGQRVEAKP-DSFDVDMMNTFLSIYLSKGDLSLACKLF 625
Query: 651 EIFSDMGVNPV-RYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPADIATYNVIIQGLGK 710
EIF+ MGV + YTYNSM+SSFVKKGYF A G+ ++M E C ADIATYNVIIQGLGK
Sbjct: 626 EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGK 685
Query: 711 MGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFEQMSSNGINPDVVT 770
MGRADLAS+VLD+L +QGGYLDIVMYNTLINALGKA R+DE +LF+ M SNGINPDVV+
Sbjct: 686 MGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVS 745
Query: 771 FNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIEKARYEKASIMRDK 828
+NT+IEV+SKAG+ K+AY++LK MLD+GC PNHVTDT LD+LG+E+EKAR++KAS +R+K
Sbjct: 746 YNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKARFKKASFVRNK 797
BLAST of Sed0020235 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 2.9e-53
Identity = 167/729 (22.91%), Postives = 315/729 (43.21%), Query Frame = 0
Query: 81 SDSLLLQILHNRSVHPLKKLDF----FKWCSLSPDYNHLA--STYSLICRILCRSGYLHE 140
+ S LL L H KK D F W DY + S ++I +L + G +
Sbjct: 134 TSSELLAFLKGLGFH--KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSS 193
Query: 141 VPPLLSTMKQDGVSVDSHTFKVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLV 200
+ + +++DG S+D +++ L+ AF SG+ +A+ + MEE G L TYN +L
Sbjct: 194 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 253
Query: 201 ALVRKGQVGLALSIFFKLIDAFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVE 260
G++G + L++ + G P+A N L+ ++ + E
Sbjct: 254 VF---GKMGTPWNKITSLVEKMKSDG-----------IAPDAYTYNTLITCCKRGSLHQE 313
Query: 261 FKGVFDKLRAIRAFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCT 320
VF++++A F ++ YN + +G ++ + EM V F P + T
Sbjct: 314 AAQVFEEMKA-AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-----VLNGFSPSIVT 373
Query: 321 YNSLIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEME 380
YNSLI G + +A+ + ++ G +PD FTY ++ G ++ +++ A IF EM
Sbjct: 374 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 433
Query: 381 YNGFIPDTIVYNSLLDGLFKARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAA 440
G P+ +N+ + K E ++FD + G+ T+N L+ +NG +
Sbjct: 434 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 493
Query: 441 ASYSLFCDLKKKGQFVDGVTYSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLL 500
+F ++K+ G + T++ ++ + G E A+ + M G DL T ++L
Sbjct: 494 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 553
Query: 501 IAMHKQGRWDRLERLMKYIREGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLN 560
A+ + G W++ E+++ + +G P+ L +
Sbjct: 554 AALARGGMWEQSEKVLAEMEDGRCKPNELTY----------------------------- 613
Query: 561 EIISSRASSLSEADIDDVTKNTEERDADNWSSSPHADLLANLARST-SHSLQPFALGKGQ 620
SL A +++ L+ +LA S ++P A+
Sbjct: 614 -------CSLLHA----------------YANGKEIGLMHSLAEEVYSGVIEPRAV---- 673
Query: 621 RVQAKGIDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKK 680
++ T + + L A + F + G +P T NSM+S + ++
Sbjct: 674 -------------LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 733
Query: 681 GYFHQAWGIFNEMGEKVCPADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMY 740
+A G+ + M E+ +ATYN ++ + + +L +++ +G DI+ Y
Sbjct: 734 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 771
Query: 741 NTLINALGKAGRMDEVNKLFEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLD 800
NT+I A + RM + +++F +M ++GI PDV+T+NT I ++ F++A ++ M+
Sbjct: 794 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 771
Query: 801 SGCSPNHVT 803
GC PN T
Sbjct: 854 HGCRPNQNT 771
BLAST of Sed0020235 vs. ExPASy Swiss-Prot
Match:
Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)
HSP 1 Score: 210.3 bits (534), Expect = 8.3e-53
Identity = 186/730 (25.48%), Postives = 331/730 (45.34%), Query Frame = 0
Query: 118 TYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTFKVLLDAFIKSGKIDDALEILDHM 177
T+++ R+L R+G ++E +L M +G D T+ VL+DA + K+D A E+ + M
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 178 ----------------EELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLIDAFNNGGQ 237
+ + +L++ + + G V ++ F L+DA G
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT-FTILVDALCKAGN 379
Query: 238 EGTV-----AAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCGYN 297
G LPN N L+ L + + +F + ++ + Y
Sbjct: 380 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL-GVKPTAYTYI 439
Query: 298 ICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIVWE 357
+ I +G G ++L F++MK T+ P++ N+ ++ L G+ ++A ++
Sbjct: 440 VFIDYYGKSGDSVSALETFEKMK-----TKGIAPNIVACNASLYSLAKAGRDREAKQIFY 499
Query: 358 ELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFKAR 417
LK G PD+ TY ++++ K +D+A + +EM NG PD IV NSL++ L+KA
Sbjct: 500 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 559
Query: 418 KVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVTYS 477
+V EA ++F RM + ++ + TYN L+ GL +NG+ + LF + +KG + +T++
Sbjct: 560 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 619
Query: 478 IIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGR-------WDRLERL 537
+ LCK + AL+++ +M G + D+ T +++ + K G+ + ++++L
Sbjct: 620 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 679
Query: 538 M--KYIREGDLVPSVLKWKANMED----LTKDQQSKSKDYSPLFFPKKDLNEIISSRASS 597
+ ++ L+P V+K + +ED +T + + + LF+ +DL S
Sbjct: 680 VYPDFVTLCTLLPGVVK-ASLIEDAYKIITNFLYNCADQPANLFW--EDL------IGSI 739
Query: 598 LSEADIDDVTKNTEERDADNWSSSPHADLLANLARSTSHSLQPFA------LGKGQRVQA 657
L+EA ID+ +E A+ + L+ + S H+ A K VQ
Sbjct: 740 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 799
Query: 658 KGIDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFH 717
K + N + L + +A +F G P TYN +L ++ K G
Sbjct: 800 K------LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 859
Query: 718 QAWGIFNEMGEKVCPADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIV-MYNTL 777
+ + ++ EM C A+ T+N++I GL K G D A + LM + Y L
Sbjct: 860 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 919
Query: 778 INALGKAGRMDEVNKLFEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGC 807
I+ L K+GR+ E +LFE M G P+ +N LI KAG A K M+ G
Sbjct: 920 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 967
BLAST of Sed0020235 vs. ExPASy Swiss-Prot
Match:
Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)
HSP 1 Score: 206.8 bits (525), Expect = 9.2e-52
Identity = 142/537 (26.44%), Postives = 250/537 (46.55%), Query Frame = 0
Query: 271 NVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKD 330
++ +N + A D ++L ++M++ +V L TYN LI+ C ++
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV-----HGLYTYNILINCFCRRSQISL 143
Query: 331 ALIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLD 390
AL + ++ G+EP T ++ G C R+ DA + ++M G+ PDTI + +L+
Sbjct: 144 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 203
Query: 391 GLFKARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFV 450
GLF K EA L DRMVQ G + + TY ++++GL + G + +L ++
Sbjct: 204 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 263
Query: 451 DGVTYSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLM 510
D V ++ I+ LCK ++ AL L +EME +G +++T +SL+ + GRW +L+
Sbjct: 264 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 323
Query: 511 KYIREGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADID 570
+ E + P+++ + A ++ K + K + L+ D
Sbjct: 324 SDMIEKKINPNLVTFNALIDAFVK--EGKFVEAEKLY----------------------D 383
Query: 571 DVTKNTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSF-DIDMVN 630
D+ K + + D ++S + + + + F + K D F D+ N
Sbjct: 384 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSK---------DCFPDVVTYN 443
Query: 631 TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 690
T + F ++ +LF S G+ TY +++ G A +F +M
Sbjct: 444 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 503
Query: 691 VCPADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEV 750
P DI TY++++ GL G+ + A V D + + LDI +Y T+I + KAG++D+
Sbjct: 504 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 563
Query: 751 NKLFEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTL 807
LF +S G+ P+VVT+NT+I ++AY LK M + G PN T TL
Sbjct: 564 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
BLAST of Sed0020235 vs. ExPASy Swiss-Prot
Match:
Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)
HSP 1 Score: 206.1 bits (523), Expect = 1.6e-51
Identity = 136/497 (27.36%), Postives = 237/497 (47.69%), Query Frame = 0
Query: 311 DLCTYNSLIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIF 370
+L TYN LI+ C ++ AL + ++ G+EP T ++ G C R+ DA +
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 371 NEMEYNGFIPDTIVYNSLLDGLFKARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRN 430
++M G+ PDTI + +L+ GLF K EA L DRMVQ G + + TY ++++GL +
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 431 GRAAASYSLFCDLKKKGQFVDGVTYSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITV 490
G +++L ++ D V ++ I+ LCK ++ AL L +EME +G +++T
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 491 TSLLIAMHKQGRWDRLERLMKYIREGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPK 550
+SL+ + GRW +L+ + E + P+++ + A ++ K+ + F
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK---------FVEA 283
Query: 551 KDLNEIISSRASSLSEADIDDVTKNTEERDADNWSSSPHADLLANLARSTSHSLQPFALG 610
+ L+ DD+ K + + D ++S + + + + F +
Sbjct: 284 EKLH---------------DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVS 343
Query: 611 KGQRVQAKGIDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSS 670
K D F D+D NT + F ++ +LF S G+ TY +++
Sbjct: 344 K---------DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 403
Query: 671 FVKKGYFHQAWGIFNEMGEKVCPADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLD 730
G A +F +M P DI TY++++ GL G+ + A V D + + LD
Sbjct: 404 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 463
Query: 731 IVMYNTLINALGKAGRMDEVNKLFEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLK 790
I +Y T+I + KAG++D+ LF +S G+ P+VVT+NT+I ++AY LK
Sbjct: 464 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 506
Query: 791 MMLDSGCSPNHVTDTTL 807
M + G P+ T TL
Sbjct: 524 KMKEDGPLPDSGTYNTL 506
BLAST of Sed0020235 vs. ExPASy TrEMBL
Match:
A0A6J1EPT7 (pentatricopeptide repeat-containing protein At4g01570 OS=Cucurbita moschata OX=3662 GN=LOC111436296 PE=4 SV=1)
HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 685/796 (86.06%), Postives = 739/796 (92.84%), Query Frame = 0
Query: 35 VGGFVAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSV 94
+GGFVAMESR + TL +LADL LVASITK L++SGTRTLQH L IS+ LLLQIL +RSV
Sbjct: 5 IGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILRSRSV 64
Query: 95 HPLKKLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTF 154
HP KLDFFKWCSLSP+++H STYS I RILCRSGYLHEVP LLS+MK+DGV VDSHTF
Sbjct: 65 HPSNKLDFFKWCSLSPNFSHSPSTYSQIFRILCRSGYLHEVPLLLSSMKRDGVDVDSHTF 124
Query: 155 KVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLID 214
KVLLDAFI+SGK DDAL+ILDHMEELGTSLELNTYNSVLVALVRK QVGLALSIFFKL D
Sbjct: 125 KVLLDAFIRSGKFDDALDILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKLFD 184
Query: 215 AFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCG 274
AF+ GGQEG+ A S SFLPNALACNELLVALRKSDMRVEFK VFDKLR IR+FEFNVCG
Sbjct: 185 AFSTGGQEGS-AVPSFSFLPNALACNELLVALRKSDMRVEFKKVFDKLRTIRSFEFNVCG 244
Query: 275 YNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIV 334
YNICIHAFGCWGYLDTSLALFKEMKQ+SLV+ SF PDLCTYNSLIHVLCLVGKV DALIV
Sbjct: 245 YNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFSPDLCTYNSLIHVLCLVGKVNDALIV 304
Query: 335 WEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFK 394
WEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF+PDTIVYNSLLDGLFK
Sbjct: 305 WEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPDTIVYNSLLDGLFK 364
Query: 395 ARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVT 454
AR+V+EACQ FD+MVQEGVRAS WTYNILIDGLFRNGRA ASY+LFCDLKKKGQFVDGVT
Sbjct: 365 ARRVVEACQFFDKMVQEGVRASPWTYNILIDGLFRNGRAEASYTLFCDLKKKGQFVDGVT 424
Query: 455 YSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIR 514
YSII+L LCKEG LE ALQLVEEMEARGF++DL+TVTSLLIAMHKQG+W+ LERLMK+IR
Sbjct: 425 YSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMHKQGQWEGLERLMKHIR 484
Query: 515 EGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTK 574
EGDLVP+VLKWKANMED K Q++K KDYSPLF PK+DL+EIISSRASS+ A +DD+++
Sbjct: 485 EGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRASSV--AKVDDISE 544
Query: 575 NTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSI 634
NTEE+D DNWSSSPH DLLANLA+ST SLQPF+L GQRVQAKG +SFDIDMVNTFLSI
Sbjct: 545 NTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVQAKGDNSFDIDMVNTFLSI 604
Query: 635 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 694
FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLS+FVKKGYF QAWGIFNEMGEKVCPAD
Sbjct: 605 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSAFVKKGYFEQAWGIFNEMGEKVCPAD 664
Query: 695 IATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFE 754
IATYNVIIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMD+VNKLFE
Sbjct: 665 IATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFE 724
Query: 755 QMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIE 814
QM S+GINPDVV+FNTLIEVHSKAGRFKDAY+FLKMMLDSGCSPNHVTDT LDFLGREIE
Sbjct: 725 QMRSSGINPDVVSFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTILDFLGREIE 784
Query: 815 KARYEKASIMRDKNSS 831
KARYEKASIMR+KNSS
Sbjct: 785 KARYEKASIMREKNSS 797
BLAST of Sed0020235 vs. ExPASy TrEMBL
Match:
A0A6J1JWP1 (pentatricopeptide repeat-containing protein At4g01570 OS=Cucurbita maxima OX=3661 GN=LOC111488557 PE=4 SV=1)
HSP 1 Score: 1369.8 bits (3544), Expect = 0.0e+00
Identity = 677/796 (85.05%), Postives = 739/796 (92.84%), Query Frame = 0
Query: 35 VGGFVAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSV 94
+GGFVAMESR + TL +LADL LVASITK L++SGTRTLQH L IS+ LLLQIL +RSV
Sbjct: 5 IGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILRSRSV 64
Query: 95 HPLKKLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTF 154
HP KLDFFKWCSLSP+++H ASTYS I RILCRSGY HEVP LLS+MK+DGV VDSHTF
Sbjct: 65 HPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVDVDSHTF 124
Query: 155 KVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLID 214
KVLLDAFI+SGK D ALEILDHMEELGTSLELNTYNSVLVALVRK QVGLALSIFFKL D
Sbjct: 125 KVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKLFD 184
Query: 215 AFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCG 274
AF+ GGQEG+ A S SFLPNALACNELLVALRKSDMRVEFK VFDKLR IR+FEFNVCG
Sbjct: 185 AFSTGGQEGS-AVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFEFNVCG 244
Query: 275 YNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIV 334
YNICIHAFGCWGYLDTSLALFKEMKQ+SLV+ SFGPDLCTYNSLIHVLCLVGKV DALIV
Sbjct: 245 YNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDALIV 304
Query: 335 WEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFK 394
WEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF+P+TIVYNSLLDGLFK
Sbjct: 305 WEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLDGLFK 364
Query: 395 ARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVT 454
AR+V+EACQ FD+MVQ+GVRAS WTYNILIDGLFRNGRA ASYSLFCDLKKKGQFVDGVT
Sbjct: 365 ARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVDGVT 424
Query: 455 YSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIR 514
YSII+L LCKEG LE ALQLVEEMEARGF++DL+TVTSLLIAM+KQG+W+ LERLMK+IR
Sbjct: 425 YSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLMKHIR 484
Query: 515 EGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTK 574
EGDLVP+VLKWKANMED K Q++K KDYSPLF PK+DL+EIISSRA+S+++ ++DD+++
Sbjct: 485 EGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVDDISE 544
Query: 575 NTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSI 634
NTEE+D DNWSSSPH DLLAN A+ST SLQ F+L GQRVQ+KG +SFDIDMVNTFLSI
Sbjct: 545 NTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSI 604
Query: 635 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 694
FLAKGKLSLACKLF+IFSDMGVNPVRYTYNSMLS+FVKKGYFHQAWGIFNEMGEKVCPAD
Sbjct: 605 FLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPAD 664
Query: 695 IATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFE 754
IATYN+IIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMD+VNKLFE
Sbjct: 665 IATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFE 724
Query: 755 QMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIE 814
QM S+GI PDVV+FNTLIEVHSKAGRFKDAY++LKMMLDSGCSPNHVTDT LDFLGREIE
Sbjct: 725 QMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDFLGREIE 784
Query: 815 KARYEKASIMRDKNSS 831
KARYEKASIMRDKNSS
Sbjct: 785 KARYEKASIMRDKNSS 799
BLAST of Sed0020235 vs. ExPASy TrEMBL
Match:
A0A6J1C0Z4 (pentatricopeptide repeat-containing protein At4g01570 OS=Momordica charantia OX=3673 GN=LOC111007043 PE=4 SV=1)
HSP 1 Score: 1347.8 bits (3487), Expect = 0.0e+00
Identity = 673/795 (84.65%), Postives = 727/795 (91.45%), Query Frame = 0
Query: 37 GFVAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQH--HLLPISDSLLLQILHNRSV 96
GFVAMESR S+L Q+ADL LVAS+TK L++SGTRTLQH H LP+S+ LLLQIL +RS+
Sbjct: 7 GFVAMESRAMSSLSQMADLLLVASLTKTLSESGTRTLQHHSHSLPLSEPLLLQILRSRSL 66
Query: 97 HPLKKLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTF 156
HP KKL+FF WCSLSP+Y H ASTYS I ILCR+GYLHEVP LLS+MK+DGV+VDSHTF
Sbjct: 67 HPSKKLEFFTWCSLSPNYKHSASTYSRILHILCRAGYLHEVPLLLSSMKRDGVAVDSHTF 126
Query: 157 KVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLID 216
K+LLDAFI SGK D ALEILDHMEELGT LEL+TYNS+L+ALVRK QVGLALSIF KL D
Sbjct: 127 KLLLDAFIGSGKFDAALEILDHMEELGTGLELHTYNSLLLALVRKNQVGLALSIFLKLFD 186
Query: 217 AFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCG 276
AF NGG GTV A SISFLP++LACNELLVALR++DMR+EFK VFDKLR IR FEFN+CG
Sbjct: 187 AFYNGGHVGTV-ADSISFLPSSLACNELLVALRRADMRIEFKKVFDKLREIRGFEFNICG 246
Query: 277 YNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIV 336
YNICIHAFGCWGYLDTSLALFKEMKQKS V++SFGPDLCTYNSLIHVLCLVG+VKDALIV
Sbjct: 247 YNICIHAFGCWGYLDTSLALFKEMKQKSSVSQSFGPDLCTYNSLIHVLCLVGRVKDALIV 306
Query: 337 WEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFK 396
WEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT+IFNEMEYNGF DTIVYNSLLDGLFK
Sbjct: 307 WEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATMIFNEMEYNGFTLDTIVYNSLLDGLFK 366
Query: 397 ARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVT 456
ARKV+E CQLFD+MVQEGVRAS WTYNILIDGLFRNGRAAA YSLFCDLKKKGQFVDGVT
Sbjct: 367 ARKVVEGCQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAAGYSLFCDLKKKGQFVDGVT 426
Query: 457 YSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIR 516
YSI+VL LCKEG LE A+Q VEEME RGFIVDLITV+SLLI MHKQGRWD LERLMK+IR
Sbjct: 427 YSIVVLQLCKEGLLEEAIQSVEEMEVRGFIVDLITVSSLLIGMHKQGRWDGLERLMKHIR 486
Query: 517 EGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTK 576
EGDLVP+VLKWKANMED K QQ+K KDYS LF PK+DLNEIISSRASS+ + DI+ +
Sbjct: 487 EGDLVPNVLKWKANMEDSVKYQQNKRKDYSTLFSPKEDLNEIISSRASSVMKVDINGIFI 546
Query: 577 NTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSI 636
NTEE NWS SPH DLLANLARSTSHS QPF+L +G+RVQAKG +SFDIDMVNTFLSI
Sbjct: 547 NTEE----NWSESPHVDLLANLARSTSHSSQPFSLAQGRRVQAKGANSFDIDMVNTFLSI 606
Query: 637 FLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 696
FLAKGKLSLACKLFEIFSDMGV+PVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD
Sbjct: 607 FLAKGKLSLACKLFEIFSDMGVSPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPAD 666
Query: 697 IATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFE 756
IATYN+IIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLF+
Sbjct: 667 IATYNMIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFQ 726
Query: 757 QMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIE 816
QM S+GINPDVVTFNTLIEVHSKAGRFKDAY+FLKMMLDSGC+PNHVTDTTLDFLGREIE
Sbjct: 727 QMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCAPNHVTDTTLDFLGREIE 786
Query: 817 KARYEKASIMRDKNS 830
K RYEKASI+RDKNS
Sbjct: 787 KMRYEKASIIRDKNS 796
BLAST of Sed0020235 vs. ExPASy TrEMBL
Match:
A0A5A7TE47 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002570 PE=4 SV=1)
HSP 1 Score: 1327.4 bits (3434), Expect = 0.0e+00
Identity = 658/792 (83.08%), Postives = 720/792 (90.91%), Query Frame = 0
Query: 39 VAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSVHPLK 98
+ SR STL QL+DL LVASITK L++SGTRTLQHH LPIS LLLQILH+RS++P
Sbjct: 13 IESHSRTVSTLSQLSDLLLVASITKTLSESGTRTLQHHSLPISHPLLLQILHSRSLNPSH 72
Query: 99 KLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTFKVLL 158
KLDFFKWCSL+P++NH STYS I ILCRSGYLHEVPPLL +MK+DGVSVDSHTFKVLL
Sbjct: 73 KLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLL 132
Query: 159 DAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLIDAFNN 218
DAFI+SGK D ALEILDHME+LGTSLELNTYNSVLVAL+RK QVGLALSIFFKL D NN
Sbjct: 133 DAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLFDGLNN 192
Query: 219 GGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCGYNIC 278
GGQ+ + AA S FLPN+LACNELLVALRK DMRVEF+ VFDKLRAI AFEFNVCGYNIC
Sbjct: 193 GGQDDS-AATSFHFLPNSLACNELLVALRKLDMRVEFRKVFDKLRAIEAFEFNVCGYNIC 252
Query: 279 IHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIVWEEL 338
I+AFGCWGYLDT+L+LFKEMK+KSLV SFGPDLCTYNS+I VLCLVGKVKDALIVWEEL
Sbjct: 253 IYAFGCWGYLDTALSLFKEMKEKSLVLGSFGPDLCTYNSIIRVLCLVGKVKDALIVWEEL 312
Query: 339 KGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFKARKV 398
KGSGHEPDAFTYR+IIQGCCKSYRMDDAT+IFNEMEYNG IPD IVYNSLL+GLFKARKV
Sbjct: 313 KGSGHEPDAFTYRIIIQGCCKSYRMDDATMIFNEMEYNGLIPDIIVYNSLLNGLFKARKV 372
Query: 399 IEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVTYSII 458
EACQLFD+MVQE VRAS WTYNILIDGLFRNGRA A Y+LFCDLKKKGQFVDGVTYSII
Sbjct: 373 TEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQFVDGVTYSII 432
Query: 459 VLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIREGDL 518
+L LCKEG LE ALQLVEEMEARGF+VDLIT+TSLLIAMHKQG+W+ LERLMK+IREGDL
Sbjct: 433 ILQLCKEGLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWEGLERLMKHIREGDL 492
Query: 519 VPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTKNTEE 578
VP+VLKWK NMED K Q++K +D+S LF PK+DL E+ISSRASS +E +ID+ +NTEE
Sbjct: 493 VPNVLKWKINMEDSIKYQKNKREDFSSLFSPKEDLIEVISSRASSAAEVNIDNSVENTEE 552
Query: 579 RDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSIFLAK 638
D D WSSSPH D LANLA ST+ LQPF+L +G+R+Q KG +SFDI+MVNTFLSIFLAK
Sbjct: 553 MDTDGWSSSPHVDGLANLANSTTDILQPFSLRQGRRIQEKGNNSFDINMVNTFLSIFLAK 612
Query: 639 GKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPADIATY 698
GKL+LACKLFEIFSDMGVNPV+YTYNSMLSSFVKKGYFHQAWGIFNEMGE VCPADIATY
Sbjct: 613 GKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATY 672
Query: 699 NVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFEQMSS 758
NVIIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTLINALGKAGRMD+VNKLF+QM +
Sbjct: 673 NVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFDQMRN 732
Query: 759 NGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIEKARY 818
+GINPDVVTFNTLIEVHSKAGRFKDAY+FLKMMLDSGCSPNHVTDTTLDFLGREIEKARY
Sbjct: 733 SGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREIEKARY 792
Query: 819 EKASIMRDKNSS 831
EKASI+RDKNSS
Sbjct: 793 EKASIIRDKNSS 803
BLAST of Sed0020235 vs. ExPASy TrEMBL
Match:
A0A1S3CBH7 (pentatricopeptide repeat-containing protein At4g01570 OS=Cucumis melo OX=3656 GN=LOC103498827 PE=4 SV=1)
HSP 1 Score: 1327.4 bits (3434), Expect = 0.0e+00
Identity = 658/792 (83.08%), Postives = 720/792 (90.91%), Query Frame = 0
Query: 39 VAMESRVSSTLFQLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSVHPLK 98
+ SR STL QL+DL LVASITK L++SGTRTLQHH LPIS LLLQILH+RS++P
Sbjct: 13 IESHSRTVSTLSQLSDLLLVASITKTLSESGTRTLQHHSLPISHPLLLQILHSRSLNPSH 72
Query: 99 KLDFFKWCSLSPDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTFKVLL 158
KLDFFKWCSL+P++NH STYS I ILCRSGYLHEVPPLL +MK+DGVSVDSHTFKVLL
Sbjct: 73 KLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLL 132
Query: 159 DAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLIDAFNN 218
DAFI+SGK D ALEILDHME+LGTSLELNTYNSVLVAL+RK QVGLALSIFFKL D NN
Sbjct: 133 DAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLFDGLNN 192
Query: 219 GGQEGTVAAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCGYNIC 278
GGQ+ + AA S FLPN+LACNELLVALRK DMRVEF+ VFDKLRAI AFEFNVCGYNIC
Sbjct: 193 GGQDDS-AATSFHFLPNSLACNELLVALRKLDMRVEFRKVFDKLRAIEAFEFNVCGYNIC 252
Query: 279 IHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIVWEEL 338
I+AFGCWGYLDT+L+LFKEMK+KSLV SFGPDLCTYNS+I VLCLVGKVKDALIVWEEL
Sbjct: 253 IYAFGCWGYLDTALSLFKEMKEKSLVLGSFGPDLCTYNSIIRVLCLVGKVKDALIVWEEL 312
Query: 339 KGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFKARKV 398
KGSGHEPDAFTYR+IIQGCCKSYRMDDAT+IFNEMEYNG IPD IVYNSLL+GLFKARKV
Sbjct: 313 KGSGHEPDAFTYRIIIQGCCKSYRMDDATMIFNEMEYNGLIPDIIVYNSLLNGLFKARKV 372
Query: 399 IEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVTYSII 458
EACQLFD+MVQE VRAS WTYNILIDGLFRNGRA A Y+LFCDLKKKGQFVDGVTYSII
Sbjct: 373 TEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQFVDGVTYSII 432
Query: 459 VLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIREGDL 518
+L LCKEG LE ALQLVEEMEARGF+VDLIT+TSLLIAMHKQG+W+ LERLMK+IREGDL
Sbjct: 433 ILQLCKEGLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWEGLERLMKHIREGDL 492
Query: 519 VPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTKNTEE 578
VP+VLKWK NMED K Q++K +D+S LF PK+DL E+ISSRASS +E +ID+ +NTEE
Sbjct: 493 VPNVLKWKINMEDSIKYQKNKREDFSSLFSPKEDLIEVISSRASSAAEVNIDNSVENTEE 552
Query: 579 RDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSIFLAK 638
D D WSSSPH D LANLA ST+ LQPF+L +G+R+Q KG +SFDI+MVNTFLSIFLAK
Sbjct: 553 MDTDGWSSSPHVDGLANLANSTTDILQPFSLRQGRRIQEKGNNSFDINMVNTFLSIFLAK 612
Query: 639 GKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPADIATY 698
GKL+LACKLFEIFSDMGVNPV+YTYNSMLSSFVKKGYFHQAWGIFNEMGE VCPADIATY
Sbjct: 613 GKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATY 672
Query: 699 NVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFEQMSS 758
NVIIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTLINALGKAGRMD+VNKLF+QM +
Sbjct: 673 NVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFDQMRN 732
Query: 759 NGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIEKARY 818
+GINPDVVTFNTLIEVHSKAGRFKDAY+FLKMMLDSGCSPNHVTDTTLDFLGREIEKARY
Sbjct: 733 SGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREIEKARY 792
Query: 819 EKASIMRDKNSS 831
EKASI+RDKNSS
Sbjct: 793 EKASIIRDKNSS 803
BLAST of Sed0020235 vs. TAIR 10
Match:
AT4G01570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 984.2 bits (2543), Expect = 6.5e-287
Identity = 491/780 (62.95%), Postives = 613/780 (78.59%), Query Frame = 0
Query: 51 QLADLFLVASITKALAKSGTRTLQHHLLPISDSLLLQILHNRSVHPLKKLDFFKWC-SLS 110
QL ++ LVAS++K L++SGTR+L + +PIS+ ++LQIL S+ P KKLDFF+WC SL
Sbjct: 26 QLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLR 85
Query: 111 PDYNHLASTYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTFKVLLDAFIKSGKIDD 170
P Y H A+ YS I R +CR+G L EVP LL +MK+DGV++D K+LLD+ I+SGK +
Sbjct: 86 PGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFES 145
Query: 171 ALEILDHMEELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLIDAFNNGGQEGTVAAAS 230
AL +LD+MEELG L + Y+SVL+ALV+K ++ LALSI FKL++A +N + T
Sbjct: 146 ALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVII 205
Query: 231 ISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCGYNICIHAFGCWGYLD 290
+S+LP +A NELLV LR++DMR EFK VF+KL+ ++ F+F+ YNICIH FGCWG LD
Sbjct: 206 VSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLD 265
Query: 291 TSLALFKEMKQKSLV-TESFGPDLCTYNSLIHVLCLVGKVKDALIVWEELKGSGHEPDAF 350
+L+LFKEMK++S V SFGPD+CTYNSLIHVLCL GK KDALIVW+ELK SGHEPD
Sbjct: 266 AALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNS 325
Query: 351 TYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFKARKVIEACQLFDRM 410
TYR++IQGCCKSYRMDDA I+ EM+YNGF+PDTIVYN LLDG KARKV EACQLF++M
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 411 VQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVTYSIIVLHLCKEGWL 470
VQEGVRAS WTYNILIDGLFRNGRA A ++LFCDLKKKGQFVD +T+SI+ L LC+EG L
Sbjct: 386 VQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 471 EGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLMKYIREGDLVPSVLKWKAN 530
EGA++LVEEME RGF VDL+T++SLLI HKQGRWD E+LMK+IREG+LVP+VL+W A
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAG 505
Query: 531 MEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADIDDVTKNTEERDADNWSSSP 590
+E K QSK KDY+P+F K +I+S S A ++V+ + D WSSSP
Sbjct: 506 VEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVS----PMEDDPWSSSP 565
Query: 591 HADLLANLARSTSHSLQPFALGKGQRVQAKGIDSFDIDMVNTFLSIFLAKGKLSLACKLF 650
+ D LA + F L +GQRV+AK DSFD+DM+NTFLSI+L+KG LSLACKLF
Sbjct: 566 YMD---QLAHQRNQPKPLFGLARGQRVEAKP-DSFDVDMMNTFLSIYLSKGDLSLACKLF 625
Query: 651 EIFSDMGVNPV-RYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPADIATYNVIIQGLGK 710
EIF+ MGV + YTYNSM+SSFVKKGYF A G+ ++M E C ADIATYNVIIQGLGK
Sbjct: 626 EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGK 685
Query: 711 MGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEVNKLFEQMSSNGINPDVVT 770
MGRADLAS+VLD+L +QGGYLDIVMYNTLINALGKA R+DE +LF+ M SNGINPDVV+
Sbjct: 686 MGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVS 745
Query: 771 FNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTLDFLGREIEKARYEKASIMRDK 828
+NT+IEV+SKAG+ K+AY++LK MLD+GC PNHVTDT LD+LG+E+EKAR++KAS +R+K
Sbjct: 746 YNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKARFKKASFVRNK 797
BLAST of Sed0020235 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 211.8 bits (538), Expect = 2.0e-54
Identity = 167/729 (22.91%), Postives = 315/729 (43.21%), Query Frame = 0
Query: 81 SDSLLLQILHNRSVHPLKKLDF----FKWCSLSPDYNHLA--STYSLICRILCRSGYLHE 140
+ S LL L H KK D F W DY + S ++I +L + G +
Sbjct: 134 TSSELLAFLKGLGFH--KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSS 193
Query: 141 VPPLLSTMKQDGVSVDSHTFKVLLDAFIKSGKIDDALEILDHMEELGTSLELNTYNSVLV 200
+ + +++DG S+D +++ L+ AF SG+ +A+ + MEE G L TYN +L
Sbjct: 194 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 253
Query: 201 ALVRKGQVGLALSIFFKLIDAFNNGGQEGTVAAASISFLPNALACNELLVALRKSDMRVE 260
G++G + L++ + G P+A N L+ ++ + E
Sbjct: 254 VF---GKMGTPWNKITSLVEKMKSDG-----------IAPDAYTYNTLITCCKRGSLHQE 313
Query: 261 FKGVFDKLRAIRAFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCT 320
VF++++A F ++ YN + +G ++ + EM V F P + T
Sbjct: 314 AAQVFEEMKA-AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-----VLNGFSPSIVT 373
Query: 321 YNSLIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEME 380
YNSLI G + +A+ + ++ G +PD FTY ++ G ++ +++ A IF EM
Sbjct: 374 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 433
Query: 381 YNGFIPDTIVYNSLLDGLFKARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAA 440
G P+ +N+ + K E ++FD + G+ T+N L+ +NG +
Sbjct: 434 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 493
Query: 441 ASYSLFCDLKKKGQFVDGVTYSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLL 500
+F ++K+ G + T++ ++ + G E A+ + M G DL T ++L
Sbjct: 494 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 553
Query: 501 IAMHKQGRWDRLERLMKYIREGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLN 560
A+ + G W++ E+++ + +G P+ L +
Sbjct: 554 AALARGGMWEQSEKVLAEMEDGRCKPNELTY----------------------------- 613
Query: 561 EIISSRASSLSEADIDDVTKNTEERDADNWSSSPHADLLANLARST-SHSLQPFALGKGQ 620
SL A +++ L+ +LA S ++P A+
Sbjct: 614 -------CSLLHA----------------YANGKEIGLMHSLAEEVYSGVIEPRAV---- 673
Query: 621 RVQAKGIDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKK 680
++ T + + L A + F + G +P T NSM+S + ++
Sbjct: 674 -------------LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 733
Query: 681 GYFHQAWGIFNEMGEKVCPADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMY 740
+A G+ + M E+ +ATYN ++ + + +L +++ +G DI+ Y
Sbjct: 734 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 771
Query: 741 NTLINALGKAGRMDEVNKLFEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLD 800
NT+I A + RM + +++F +M ++GI PDV+T+NT I ++ F++A ++ M+
Sbjct: 794 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 771
Query: 801 SGCSPNHVT 803
GC PN T
Sbjct: 854 HGCRPNQNT 771
BLAST of Sed0020235 vs. TAIR 10
Match:
AT4G31850.1 (proton gradient regulation 3 )
HSP 1 Score: 210.3 bits (534), Expect = 5.9e-54
Identity = 186/730 (25.48%), Postives = 331/730 (45.34%), Query Frame = 0
Query: 118 TYSLICRILCRSGYLHEVPPLLSTMKQDGVSVDSHTFKVLLDAFIKSGKIDDALEILDHM 177
T+++ R+L R+G ++E +L M +G D T+ VL+DA + K+D A E+ + M
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 178 ----------------EELGTSLELNTYNSVLVALVRKGQVGLALSIFFKLIDAFNNGGQ 237
+ + +L++ + + G V ++ F L+DA G
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT-FTILVDALCKAGN 379
Query: 238 EGTV-----AAASISFLPNALACNELLVALRKSDMRVEFKGVFDKLRAIRAFEFNVCGYN 297
G LPN N L+ L + + +F + ++ + Y
Sbjct: 380 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL-GVKPTAYTYI 439
Query: 298 ICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKDALIVWE 357
+ I +G G ++L F++MK T+ P++ N+ ++ L G+ ++A ++
Sbjct: 440 VFIDYYGKSGDSVSALETFEKMK-----TKGIAPNIVACNASLYSLAKAGRDREAKQIFY 499
Query: 358 ELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLDGLFKAR 417
LK G PD+ TY ++++ K +D+A + +EM NG PD IV NSL++ L+KA
Sbjct: 500 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 559
Query: 418 KVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVTYS 477
+V EA ++F RM + ++ + TYN L+ GL +NG+ + LF + +KG + +T++
Sbjct: 560 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 619
Query: 478 IIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGR-------WDRLERL 537
+ LCK + AL+++ +M G + D+ T +++ + K G+ + ++++L
Sbjct: 620 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 679
Query: 538 M--KYIREGDLVPSVLKWKANMED----LTKDQQSKSKDYSPLFFPKKDLNEIISSRASS 597
+ ++ L+P V+K + +ED +T + + + LF+ +DL S
Sbjct: 680 VYPDFVTLCTLLPGVVK-ASLIEDAYKIITNFLYNCADQPANLFW--EDL------IGSI 739
Query: 598 LSEADIDDVTKNTEERDADNWSSSPHADLLANLARSTSHSLQPFA------LGKGQRVQA 657
L+EA ID+ +E A+ + L+ + S H+ A K VQ
Sbjct: 740 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 799
Query: 658 KGIDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFH 717
K + N + L + +A +F G P TYN +L ++ K G
Sbjct: 800 K------LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 859
Query: 718 QAWGIFNEMGEKVCPADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIV-MYNTL 777
+ + ++ EM C A+ T+N++I GL K G D A + LM + Y L
Sbjct: 860 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 919
Query: 778 INALGKAGRMDEVNKLFEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGC 807
I+ L K+GR+ E +LFE M G P+ +N LI KAG A K M+ G
Sbjct: 920 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 967
BLAST of Sed0020235 vs. TAIR 10
Match:
AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 206.8 bits (525), Expect = 6.5e-53
Identity = 142/537 (26.44%), Postives = 250/537 (46.55%), Query Frame = 0
Query: 271 NVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVTESFGPDLCTYNSLIHVLCLVGKVKD 330
++ +N + A D ++L ++M++ +V L TYN LI+ C ++
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV-----HGLYTYNILINCFCRRSQISL 143
Query: 331 ALIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIFNEMEYNGFIPDTIVYNSLLD 390
AL + ++ G+EP T ++ G C R+ DA + ++M G+ PDTI + +L+
Sbjct: 144 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 203
Query: 391 GLFKARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFV 450
GLF K EA L DRMVQ G + + TY ++++GL + G + +L ++
Sbjct: 204 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 263
Query: 451 DGVTYSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITVTSLLIAMHKQGRWDRLERLM 510
D V ++ I+ LCK ++ AL L +EME +G +++T +SL+ + GRW +L+
Sbjct: 264 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 323
Query: 511 KYIREGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPKKDLNEIISSRASSLSEADID 570
+ E + P+++ + A ++ K + K + L+ D
Sbjct: 324 SDMIEKKINPNLVTFNALIDAFVK--EGKFVEAEKLY----------------------D 383
Query: 571 DVTKNTEERDADNWSSSPHADLLANLARSTSHSLQPFALGKGQRVQAKGIDSF-DIDMVN 630
D+ K + + D ++S + + + + F + K D F D+ N
Sbjct: 384 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSK---------DCFPDVVTYN 443
Query: 631 TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 690
T + F ++ +LF S G+ TY +++ G A +F +M
Sbjct: 444 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 503
Query: 691 VCPADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEV 750
P DI TY++++ GL G+ + A V D + + LDI +Y T+I + KAG++D+
Sbjct: 504 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 563
Query: 751 NKLFEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLKMMLDSGCSPNHVTDTTL 807
LF +S G+ P+VVT+NT+I ++AY LK M + G PN T TL
Sbjct: 564 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
BLAST of Sed0020235 vs. TAIR 10
Match:
AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 206.1 bits (523), Expect = 1.1e-52
Identity = 136/497 (27.36%), Postives = 237/497 (47.69%), Query Frame = 0
Query: 311 DLCTYNSLIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATVIF 370
+L TYN LI+ C ++ AL + ++ G+EP T ++ G C R+ DA +
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 371 NEMEYNGFIPDTIVYNSLLDGLFKARKVIEACQLFDRMVQEGVRASTWTYNILIDGLFRN 430
++M G+ PDTI + +L+ GLF K EA L DRMVQ G + + TY ++++GL +
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 431 GRAAASYSLFCDLKKKGQFVDGVTYSIIVLHLCKEGWLEGALQLVEEMEARGFIVDLITV 490
G +++L ++ D V ++ I+ LCK ++ AL L +EME +G +++T
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 491 TSLLIAMHKQGRWDRLERLMKYIREGDLVPSVLKWKANMEDLTKDQQSKSKDYSPLFFPK 550
+SL+ + GRW +L+ + E + P+++ + A ++ K+ + F
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK---------FVEA 283
Query: 551 KDLNEIISSRASSLSEADIDDVTKNTEERDADNWSSSPHADLLANLARSTSHSLQPFALG 610
+ L+ DD+ K + + D ++S + + + + F +
Sbjct: 284 EKLH---------------DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVS 343
Query: 611 KGQRVQAKGIDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSS 670
K D F D+D NT + F ++ +LF S G+ TY +++
Sbjct: 344 K---------DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 403
Query: 671 FVKKGYFHQAWGIFNEMGEKVCPADIATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLD 730
G A +F +M P DI TY++++ GL G+ + A V D + + LD
Sbjct: 404 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 463
Query: 731 IVMYNTLINALGKAGRMDEVNKLFEQMSSNGINPDVVTFNTLIEVHSKAGRFKDAYRFLK 790
I +Y T+I + KAG++D+ LF +S G+ P+VVT+NT+I ++AY LK
Sbjct: 464 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 506
Query: 791 MMLDSGCSPNHVTDTTL 807
M + G P+ T TL
Sbjct: 524 KMKEDGPLPDSGTYNTL 506
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022929794.1 | 0.0e+00 | 86.06 | pentatricopeptide repeat-containing protein At4g01570 [Cucurbita moschata] | [more] |
KAG7013843.1 | 0.0e+00 | 85.71 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023549441.1 | 0.0e+00 | 85.68 | pentatricopeptide repeat-containing protein At4g01570 [Cucurbita pepo subsp. pep... | [more] |
XP_022992119.1 | 0.0e+00 | 85.05 | pentatricopeptide repeat-containing protein At4g01570 [Cucurbita maxima] | [more] |
XP_022134897.1 | 0.0e+00 | 84.65 | pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] >XP_... | [more] |
Match Name | E-value | Identity | Description | |
Q8VZE4 | 9.2e-286 | 62.95 | Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana OX... | [more] |
Q9LYZ9 | 2.9e-53 | 22.91 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9SZ52 | 8.3e-53 | 25.48 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
Q9SXD8 | 9.2e-52 | 26.44 | Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX... | [more] |
Q9C8T7 | 1.6e-51 | 27.36 | Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EPT7 | 0.0e+00 | 86.06 | pentatricopeptide repeat-containing protein At4g01570 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1JWP1 | 0.0e+00 | 85.05 | pentatricopeptide repeat-containing protein At4g01570 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1C0Z4 | 0.0e+00 | 84.65 | pentatricopeptide repeat-containing protein At4g01570 OS=Momordica charantia OX=... | [more] |
A0A5A7TE47 | 0.0e+00 | 83.08 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CBH7 | 0.0e+00 | 83.08 | pentatricopeptide repeat-containing protein At4g01570 OS=Cucumis melo OX=3656 GN... | [more] |