Sed0011000 (gene) Chayote v1

Overview
NameSed0011000
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG07: 6877325 .. 6879793 (+)
RNA-Seq ExpressionSed0011000
SyntenySed0011000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTGACAAGATTTACAATCAATAAGACAATCCCTGTGTTATTCCCCTTCTCGCGGCGGCTTGCCTGTGTGTTATCGACCCAACCGCCCAAAAAACCCCACCAGGACCAGCCATGGCAGCTCCAGGTTCAGTTGCTGAATTGGGTATCTTCTATTCTCTCTAATTCGTCTCTCGATTCTTCTAAATGTAGAGCCATTTTGCCCCATTTGTCTCCTCTTGAGTTTGATCGCCTGTTCTTCTCCGTTGGATTGAAATCCAACCCCAAAACTTGTCTTAATTTCTTTTACTTTGCCTCCGATTCTTTCACGTTTGGGTTTACCATTCGTTCTTATTGTATATTGATTCTTTTGCTGGTTCATTCCAAGTTATTACCCCCCGCGAGATTGCTTTTGATTCGTTTGATTGATGGGAAGCTCCCCGTGTTGGATTCGGATTCGAATGTGCTTCACATTGGGATAGCTAATGCATTGCTGGGTTTAACTTCTGTGGTTGGGCGGTTTGAATGGACACAGGCTTTTGATTTGTTGATACATGTATACAGCACACAATTTAGGAATTTTGGCTTTGGTTGTGCTGTTGATGTTTTTTATGTTTTTTCTCGGAGAGGGATTTTTCCGTCTTTAAAGACTTGTAGTTTCTTATTGAGTTGTTTGGTGAAGGCTAATGAACTTGAGAAATGTTGTGAGGTCTTTGAGGTGATGTCTCAAGGTTTTCGTCCAGATGTTTTCTTGTTTACGAATGTGATAAATGGTTTGTGCAAGGGAGGGAAGATGGAAAATGCCATTGAGCTATTCATGAAAATGGAGAAGTTGGGTATTTCTCCTAATGTTGTTACTTACAATAGTATTATTCATGGTTTATGCCAGAATGGGAGATTAGATGATGCCTTCGAGCTCAAGGAAAAGATGAAAATCGAAGGGGTAAAGCCAAGTCTTATAACTTATAGTGTGCTTATTAATGGTTTGACAAAACTGGAAAACTTTGACAAAGCAAATCATGTTTTAAATGAAATGATTGACATGGGTTTTGTTCCGAATGCAGTTGTCTACAATACATTAATTGATGGATACTGCAAAATGGGCAATATCCATGAAGCTCTTAAGATTAGAGATATGATGATATCTAAAAATATAACTCCTACTTCAGTTACTTTATATACTCTCATGCAAGGGTTTTGCAAGAGTAATCAAATCGAGCAGGCGGAGAATGCTCTACAGGAGATATTATCACAAGGGCTATCTATAAACCCTGTTACTTGTTATTCAGTTATCCACTGGTTGTGTATGAAGTCGAGGTTCCATTCTGGATTGCGATCTACCATGTTAATGTTATCGAAGAACTTCAGGCCTAGTGATCAGCTGTTGACCATATTGGTATGTGGGCTTTGTAAGGATGGCAAACAATTAGAAGCAGTCAAACTTTGGTTTAGGTTATTGGAGAAAGGGTCTCCAGCGAGTACACCAACCTCTAATGCTCTGATACATGGGCTTTGTGGAGCTGGCTATATGAAAGAGGCTGTGAGAATACTCAAGGAGATGTCCAAGAGGGGGTTTTCATTGGATCGGATCACATACAACACGCTCATCTTAGGTTGTTGCAAAAAGGGAAAAGTCGAGGAATGCTTTAGACTTAAAGAAGAGATGACTAAGCATGGAATTCAACCAGACATCTATACTTGCAATTTGCTACTGCATGGACTATGCAATGCAGGAAAATTGGATGACGCTATTAAGCTTTGGGATGAATTCAAAGGTAGTGGATTGGTTTCTAATGTTCACACTTATGGGGTAATGATGGATGGATATTATAAAGCTAACAGAATGGAAGATGTTGAAAAGTTATTCAATGAGTTGGTCACTAAGAAAATAGAGCTAAATACCATTGTCTATAATATATTAATCAGAGCAAACTGTCACAGTGGAAATGTTGTTGCAGCTTTGCAACTTCGTGATAATATGAAAAGCAAGGGAATTTTTCCAACTTGTGCCTCGTATTCTTCTCTAATACACGGTATGTGCAAGATTGGTTGTGATGAAGATGCAAAACGTCTTATTGATGAAATGAGAGATGAGGGATTGTTGCCGAATGTTGTTTGTTATACAGCATTAATTGACGGTTATTGTAAGCTGGGGAAAATGGATACCGCCGAAGCTACTTTGCGTGAGATGATCTCTTTTAACATACGACCTAATAAATTTACCTACACTGTCATGATTGACGGATACTGTAAGTTAGGAAATATGGACGACGCAATCAAACTTTTGAGCAAGATGAAAGAAAGTGGAATCGTCCCAGATGTTGTTACTTACAATGCCTTGACTAATGGATTCTGCAAGAGGAAGGACATGGATAAAGCTTTTAAAATATGCGATCAAATGTCCACTGAAGGATTATCTTTAGATGAAATTACTTACACCACTCTTGCACACGGATGTAGTCGACCTACAATCACTAGCCAAGACTAA

mRNA sequence

ATGCATTTGACAAGATTTACAATCAATAAGACAATCCCTGTGTTATTCCCCTTCTCGCGGCGGCTTGCCTGTGTGTTATCGACCCAACCGCCCAAAAAACCCCACCAGGACCAGCCATGGCAGCTCCAGGTTCAGTTGCTGAATTGGGTATCTTCTATTCTCTCTAATTCGTCTCTCGATTCTTCTAAATGTAGAGCCATTTTGCCCCATTTGTCTCCTCTTGAGTTTGATCGCCTGTTCTTCTCCGTTGGATTGAAATCCAACCCCAAAACTTGTCTTAATTTCTTTTACTTTGCCTCCGATTCTTTCACGTTTGGGTTTACCATTCGTTCTTATTGTATATTGATTCTTTTGCTGGTTCATTCCAAGTTATTACCCCCCGCGAGATTGCTTTTGATTCGTTTGATTGATGGGAAGCTCCCCGTGTTGGATTCGGATTCGAATGTGCTTCACATTGGGATAGCTAATGCATTGCTGGGTTTAACTTCTGTGGTTGGGCGGTTTGAATGGACACAGGCTTTTGATTTGTTGATACATGTATACAGCACACAATTTAGGAATTTTGGCTTTGGTTGTGCTGTTGATGTTTTTTATGTTTTTTCTCGGAGAGGGATTTTTCCGTCTTTAAAGACTTGTAGTTTCTTATTGAGTTGTTTGGTGAAGGCTAATGAACTTGAGAAATGTTGTGAGGTCTTTGAGGTGATGTCTCAAGGTTTTCGTCCAGATGTTTTCTTGTTTACGAATGTGATAAATGGTTTGTGCAAGGGAGGGAAGATGGAAAATGCCATTGAGCTATTCATGAAAATGGAGAAGTTGGGTATTTCTCCTAATGTTGTTACTTACAATAGTATTATTCATGGTTTATGCCAGAATGGGAGATTAGATGATGCCTTCGAGCTCAAGGAAAAGATGAAAATCGAAGGGGTAAAGCCAAGTCTTATAACTTATAGTGTGCTTATTAATGGTTTGACAAAACTGGAAAACTTTGACAAAGCAAATCATGTTTTAAATGAAATGATTGACATGGGTTTTGTTCCGAATGCAGTTGTCTACAATACATTAATTGATGGATACTGCAAAATGGGCAATATCCATGAAGCTCTTAAGATTAGAGATATGATGATATCTAAAAATATAACTCCTACTTCAGTTACTTTATATACTCTCATGCAAGGGTTTTGCAAGAGTAATCAAATCGAGCAGGCGGAGAATGCTCTACAGGAGATATTATCACAAGGGCTATCTATAAACCCTGTTACTTGTTATTCAGTTATCCACTGGTTGTGTATGAAGTCGAGGTTCCATTCTGGATTGCGATCTACCATGTTAATGTTATCGAAGAACTTCAGGCCTAGTGATCAGCTGTTGACCATATTGGTATGTGGGCTTTGTAAGGATGGCAAACAATTAGAAGCAGTCAAACTTTGGTTTAGGTTATTGGAGAAAGGGTCTCCAGCGAGTACACCAACCTCTAATGCTCTGATACATGGGCTTTGTGGAGCTGGCTATATGAAAGAGGCTGTGAGAATACTCAAGGAGATGTCCAAGAGGGGGTTTTCATTGGATCGGATCACATACAACACGCTCATCTTAGGTTGTTGCAAAAAGGGAAAAGTCGAGGAATGCTTTAGACTTAAAGAAGAGATGACTAAGCATGGAATTCAACCAGACATCTATACTTGCAATTTGCTACTGCATGGACTATGCAATGCAGGAAAATTGGATGACGCTATTAAGCTTTGGGATGAATTCAAAGGTAGTGGATTGGTTTCTAATGTTCACACTTATGGGGTAATGATGGATGGATATTATAAAGCTAACAGAATGGAAGATGTTGAAAAGTTATTCAATGAGTTGGTCACTAAGAAAATAGAGCTAAATACCATTGTCTATAATATATTAATCAGAGCAAACTGTCACAGTGGAAATGTTGTTGCAGCTTTGCAACTTCGTGATAATATGAAAAGCAAGGGAATTTTTCCAACTTGTGCCTCGTATTCTTCTCTAATACACGGTATGTGCAAGATTGGTTGTGATGAAGATGCAAAACGTCTTATTGATGAAATGAGAGATGAGGGATTGTTGCCGAATGTTGTTTGTTATACAGCATTAATTGACGGTTATTGTAAGCTGGGGAAAATGGATACCGCCGAAGCTACTTTGCGTGAGATGATCTCTTTTAACATACGACCTAATAAATTTACCTACACTGTCATGATTGACGGATACTGTAAGTTAGGAAATATGGACGACGCAATCAAACTTTTGAGCAAGATGAAAGAAAGTGGAATCGTCCCAGATGTTGTTACTTACAATGCCTTGACTAATGGATTCTGCAAGAGGAAGGACATGGATAAAGCTTTTAAAATATGCGATCAAATGTCCACTGAAGGATTATCTTTAGATGAAATTACTTACACCACTCTTGCACACGGATGTAGTCGACCTACAATCACTAGCCAAGACTAA

Coding sequence (CDS)

ATGCATTTGACAAGATTTACAATCAATAAGACAATCCCTGTGTTATTCCCCTTCTCGCGGCGGCTTGCCTGTGTGTTATCGACCCAACCGCCCAAAAAACCCCACCAGGACCAGCCATGGCAGCTCCAGGTTCAGTTGCTGAATTGGGTATCTTCTATTCTCTCTAATTCGTCTCTCGATTCTTCTAAATGTAGAGCCATTTTGCCCCATTTGTCTCCTCTTGAGTTTGATCGCCTGTTCTTCTCCGTTGGATTGAAATCCAACCCCAAAACTTGTCTTAATTTCTTTTACTTTGCCTCCGATTCTTTCACGTTTGGGTTTACCATTCGTTCTTATTGTATATTGATTCTTTTGCTGGTTCATTCCAAGTTATTACCCCCCGCGAGATTGCTTTTGATTCGTTTGATTGATGGGAAGCTCCCCGTGTTGGATTCGGATTCGAATGTGCTTCACATTGGGATAGCTAATGCATTGCTGGGTTTAACTTCTGTGGTTGGGCGGTTTGAATGGACACAGGCTTTTGATTTGTTGATACATGTATACAGCACACAATTTAGGAATTTTGGCTTTGGTTGTGCTGTTGATGTTTTTTATGTTTTTTCTCGGAGAGGGATTTTTCCGTCTTTAAAGACTTGTAGTTTCTTATTGAGTTGTTTGGTGAAGGCTAATGAACTTGAGAAATGTTGTGAGGTCTTTGAGGTGATGTCTCAAGGTTTTCGTCCAGATGTTTTCTTGTTTACGAATGTGATAAATGGTTTGTGCAAGGGAGGGAAGATGGAAAATGCCATTGAGCTATTCATGAAAATGGAGAAGTTGGGTATTTCTCCTAATGTTGTTACTTACAATAGTATTATTCATGGTTTATGCCAGAATGGGAGATTAGATGATGCCTTCGAGCTCAAGGAAAAGATGAAAATCGAAGGGGTAAAGCCAAGTCTTATAACTTATAGTGTGCTTATTAATGGTTTGACAAAACTGGAAAACTTTGACAAAGCAAATCATGTTTTAAATGAAATGATTGACATGGGTTTTGTTCCGAATGCAGTTGTCTACAATACATTAATTGATGGATACTGCAAAATGGGCAATATCCATGAAGCTCTTAAGATTAGAGATATGATGATATCTAAAAATATAACTCCTACTTCAGTTACTTTATATACTCTCATGCAAGGGTTTTGCAAGAGTAATCAAATCGAGCAGGCGGAGAATGCTCTACAGGAGATATTATCACAAGGGCTATCTATAAACCCTGTTACTTGTTATTCAGTTATCCACTGGTTGTGTATGAAGTCGAGGTTCCATTCTGGATTGCGATCTACCATGTTAATGTTATCGAAGAACTTCAGGCCTAGTGATCAGCTGTTGACCATATTGGTATGTGGGCTTTGTAAGGATGGCAAACAATTAGAAGCAGTCAAACTTTGGTTTAGGTTATTGGAGAAAGGGTCTCCAGCGAGTACACCAACCTCTAATGCTCTGATACATGGGCTTTGTGGAGCTGGCTATATGAAAGAGGCTGTGAGAATACTCAAGGAGATGTCCAAGAGGGGGTTTTCATTGGATCGGATCACATACAACACGCTCATCTTAGGTTGTTGCAAAAAGGGAAAAGTCGAGGAATGCTTTAGACTTAAAGAAGAGATGACTAAGCATGGAATTCAACCAGACATCTATACTTGCAATTTGCTACTGCATGGACTATGCAATGCAGGAAAATTGGATGACGCTATTAAGCTTTGGGATGAATTCAAAGGTAGTGGATTGGTTTCTAATGTTCACACTTATGGGGTAATGATGGATGGATATTATAAAGCTAACAGAATGGAAGATGTTGAAAAGTTATTCAATGAGTTGGTCACTAAGAAAATAGAGCTAAATACCATTGTCTATAATATATTAATCAGAGCAAACTGTCACAGTGGAAATGTTGTTGCAGCTTTGCAACTTCGTGATAATATGAAAAGCAAGGGAATTTTTCCAACTTGTGCCTCGTATTCTTCTCTAATACACGGTATGTGCAAGATTGGTTGTGATGAAGATGCAAAACGTCTTATTGATGAAATGAGAGATGAGGGATTGTTGCCGAATGTTGTTTGTTATACAGCATTAATTGACGGTTATTGTAAGCTGGGGAAAATGGATACCGCCGAAGCTACTTTGCGTGAGATGATCTCTTTTAACATACGACCTAATAAATTTACCTACACTGTCATGATTGACGGATACTGTAAGTTAGGAAATATGGACGACGCAATCAAACTTTTGAGCAAGATGAAAGAAAGTGGAATCGTCCCAGATGTTGTTACTTACAATGCCTTGACTAATGGATTCTGCAAGAGGAAGGACATGGATAAAGCTTTTAAAATATGCGATCAAATGTCCACTGAAGGATTATCTTTAGATGAAATTACTTACACCACTCTTGCACACGGATGTAGTCGACCTACAATCACTAGCCAAGACTAA

Protein sequence

MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLDSSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLVHSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFELKEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEATLREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD
Homology
BLAST of Sed0011000 vs. NCBI nr
Match: KAG6577115.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1436.8 bits (3718), Expect = 0.0e+00
Identity = 708/822 (86.13%), Postives = 752/822 (91.48%), Query Frame = 0

Query: 1   MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLD 60
           MHLTRF INKT+PV+FPFSR++ CVLST+P K+ HQD PWQLQ QLL  VSSILSNSSLD
Sbjct: 1   MHLTRFKINKTVPVVFPFSRQVVCVLSTEPHKEHHQDPPWQLQDQLLYSVSSILSNSSLD 60

Query: 61  SSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLV 120
           SSKCRA+LPHLSP +FD+LFFSVGLK+NPKTCLNFFYFASDSF F FTIRSYC+LILLLV
Sbjct: 61  SSKCRALLPHLSPFQFDQLFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCLLILLLV 120

Query: 121 HSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHV 180
           HSK LPPARLLLIRLIDGKLPVL+SDSN LHI IAN L GLTSVVGRFE T AFDLLIHV
Sbjct: 121 HSKFLPPARLLLIRLIDGKLPVLNSDSNKLHIEIANELFGLTSVVGRFECTHAFDLLIHV 180

Query: 181 YSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFR 240
           YSTQFRN GF  AVDVFY+F+R GIFPSLKTC+FLLS LVKANELEKCCEVFEVMSQG R
Sbjct: 181 YSTQFRNLGFSYAVDVFYLFARNGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSQGVR 240

Query: 241 PDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFEL 300
           PDVFLFTNVIN LCKGGKMENA+EL M MEKLGISPNVVTYNSIIHGLCQNGRL DAFEL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQNGRLGDAFEL 300

Query: 301 KEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCK 360
           KEKM IEGVKPSLITYSVLINGLTKLE FDKAN VLNEM+D+GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDVGFVPNAVVYNTLIDGYCK 360

Query: 361 MGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVT 420
           MG I+EALKIRD+M+SKNITPTSVTLYTL+QGFCKSNQIEQAEN L+EILSQG  INPVT
Sbjct: 361 MGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKSNQIEQAENTLEEILSQGFPINPVT 420

Query: 421 CYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLL 480
           CYSVIHWLC KSRFH  LR TM+MLSKNFRPSDQLLTILVCGLCKDGK LEA +LWFRLL
Sbjct: 421 CYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLEATELWFRLL 480

Query: 481 EKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVE 540
           EKGSPAST TSNALIHGLCGAG M EAVRILKEM +RGFSLDRITYNTLILGCCK+GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLILGCCKEGKVE 540

Query: 541 ECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMM 600
           ECFRLKEEMT  GIQPDIYTCNLLL+GLCNAGKLDDAIKLWDEFK SGL+SNVHTYGVMM
Sbjct: 541 ECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWDEFKASGLISNVHTYGVMM 600

Query: 601 DGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIF 660
           D Y KANRMEDVEKLF+ELVTKK+ELN+IVYNI IRA+C +GNV AALQLRD+MKSKGIF
Sbjct: 601 DVYCKANRMEDVEKLFDELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLRDDMKSKGIF 660

Query: 661 PTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEAT 720
           PTCA+YSSLIHGMC IG  EDAKRLIDEMR+EGLLPNVVCYTALI GYCKLG+MD AEAT
Sbjct: 661 PTCATYSSLIHGMCNIGLVEDAKRLIDEMREEGLLPNVVCYTALIGGYCKLGQMDIAEAT 720

Query: 721 LREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCK 780
             EM S NIRPNK TYTVMIDGYCKLGNM++A  LLSKMKESGIVPDVVTYNALTNGFCK
Sbjct: 721 WLEMTSLNIRPNKITYTVMIDGYCKLGNMEEANNLLSKMKESGIVPDVVTYNALTNGFCK 780

Query: 781 RKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
            KDMDKAFK CD+M+T GLSLDEITYTTL HG ++PTITSQD
Sbjct: 781 GKDMDKAFKTCDEMATGGLSLDEITYTTLVHGWNQPTITSQD 822

BLAST of Sed0011000 vs. NCBI nr
Match: XP_022931380.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita moschata] >XP_022931381.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita moschata] >XP_022931382.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1431.4 bits (3704), Expect = 0.0e+00
Identity = 706/822 (85.89%), Postives = 747/822 (90.88%), Query Frame = 0

Query: 1   MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLD 60
           MHLTRF INKT+PV+FPFSR++ACVLST+P K+ HQD PWQLQ QLL  VSSILSNSSLD
Sbjct: 1   MHLTRFKINKTVPVVFPFSRQVACVLSTEPHKEHHQDPPWQLQDQLLYSVSSILSNSSLD 60

Query: 61  SSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLV 120
           SSKCRA+LPHLSP +FD LFFSVGLK+NPKTCLNFFYFASDSF F FTIRSYC+LILLLV
Sbjct: 61  SSKCRALLPHLSPFQFDHLFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCLLILLLV 120

Query: 121 HSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHV 180
           HSK LPPARLLLIRLIDGKLPVL+SDSN LHI IAN L GLTSVVGRFE T AFDLLIHV
Sbjct: 121 HSKFLPPARLLLIRLIDGKLPVLNSDSNKLHIEIANELFGLTSVVGRFECTHAFDLLIHV 180

Query: 181 YSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFR 240
           YSTQFRN GF  AVDVFY+F+R GIFPSLKTC+FLLS LVKANELEKCCEVFEVMSQG R
Sbjct: 181 YSTQFRNLGFSYAVDVFYLFARNGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSQGVR 240

Query: 241 PDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFEL 300
           PDVFLFTNVIN LCKGGKMENA+EL M MEKLGISPNVVTYNSIIHGLCQNGRL DAFEL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQNGRLGDAFEL 300

Query: 301 KEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCK 360
           KEKM IEGVKPSLITYSVLINGLTKLE FDKAN VLNEM+  GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVGAGFVPNAVVYNTLIDGYCK 360

Query: 361 MGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVT 420
           MG I+EALKIRD+M+SKNITPTSVTLYTL+QGFCKSNQIEQAEN L+EILSQG  INPVT
Sbjct: 361 MGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKSNQIEQAENTLEEILSQGFPINPVT 420

Query: 421 CYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLL 480
           CYSVIHWLC KSRFH  LR TM+MLSKNFRPSDQLLTILVCGLCKDGK LEA +LWFRL 
Sbjct: 421 CYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLEATELWFRLF 480

Query: 481 EKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVE 540
           EKGSPAST TSNALIHGLCGAG M EAVRILKEM +RGFSLDRITYNT ILGCCK+GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTFILGCCKEGKVE 540

Query: 541 ECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMM 600
           ECFRLKEEMT  GIQPDIYTCNLLL+GLCNAGKLDDAIKLW EFK SGL+SNVHTYGVMM
Sbjct: 541 ECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWGEFKASGLISNVHTYGVMM 600

Query: 601 DGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIF 660
           D Y KANRMEDVEKLFNELVTKK+ELN+IVYNI IRA+C +GNV AALQLRD+MKSKGIF
Sbjct: 601 DVYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLRDDMKSKGIF 660

Query: 661 PTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEAT 720
           PTCA+YSSLIHGMC IG  EDAKRLIDEMR+EGLLPNVVCYTALI GYCKLG+MD AEAT
Sbjct: 661 PTCATYSSLIHGMCNIGLVEDAKRLIDEMREEGLLPNVVCYTALIGGYCKLGQMDIAEAT 720

Query: 721 LREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCK 780
             EM S NIRPNK TYTVMIDGYCKLGNM++A  LLSKMKESGIVPDVVTYNALTNGFCK
Sbjct: 721 FLEMTSLNIRPNKITYTVMIDGYCKLGNMEEANNLLSKMKESGIVPDVVTYNALTNGFCK 780

Query: 781 RKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
            KDMDKAFK CD+M+T GLSLDEITYTTL HG ++PTITSQD
Sbjct: 781 GKDMDKAFKTCDEMATGGLSLDEITYTTLVHGWNQPTITSQD 822

BLAST of Sed0011000 vs. NCBI nr
Match: XP_023552294.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023552295.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023552296.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1429.5 bits (3699), Expect = 0.0e+00
Identity = 705/822 (85.77%), Postives = 749/822 (91.12%), Query Frame = 0

Query: 1   MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLD 60
           MHLTRF INKT+PV+FPFSR++ACVLST+P K+ HQD PWQLQ QLL  VSSILSNSSLD
Sbjct: 1   MHLTRFKINKTVPVVFPFSRQVACVLSTEPHKEHHQDPPWQLQDQLLYSVSSILSNSSLD 60

Query: 61  SSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLV 120
           SSKCRA+LPHLSP +FD+LFFSVGLK+NPKTCLNFFYFASDSF F FTIRSYC+LILLLV
Sbjct: 61  SSKCRALLPHLSPFQFDQLFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCLLILLLV 120

Query: 121 HSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHV 180
           HSK LPPARLLLIRLID KLPVL+SD N LHI IAN L GLTSVVGRFE T AFDLLIHV
Sbjct: 121 HSKFLPPARLLLIRLIDRKLPVLNSDLNKLHIEIANELFGLTSVVGRFECTHAFDLLIHV 180

Query: 181 YSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFR 240
           YSTQFRN GF  AVDVFY+F+R GIFPSLKTC+FLLS LVKANELEKCCEVFEVMSQG  
Sbjct: 181 YSTQFRNLGFSYAVDVFYLFARNGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSQGVS 240

Query: 241 PDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFEL 300
           PDVFLFTNVIN LCKGGKMENA+EL M MEKLGISPNVVTYNSIIHGLCQNGRL DAFEL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQNGRLGDAFEL 300

Query: 301 KEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCK 360
           KEKM IEGVKPSLITYSVLINGLTKLE FDKAN VLNEM+D GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDAGFVPNAVVYNTLIDGYCK 360

Query: 361 MGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVT 420
           MG I+EALKIRD+M+SKNITPTSVTLYTL+QGFCK+NQIEQAEN L+EILSQG  INPVT
Sbjct: 361 MGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKNNQIEQAENTLEEILSQGFPINPVT 420

Query: 421 CYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLL 480
           CYSVIHWLC KSRFH  LR TM+MLSKNFRPSDQLLTILVCGLCKDGK LEA +LWFRLL
Sbjct: 421 CYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLEATELWFRLL 480

Query: 481 EKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVE 540
           EKGSPAST TSNALIHGLCGAG M EAVRILKEM +RGFSLDRITYNTLILGCCK+GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLILGCCKEGKVE 540

Query: 541 ECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMM 600
           ECFRLKEEMT  GIQPDIYTCNLLL+GLCNAGKLDDAIKLWDEFK SGL+SNVHTYGVMM
Sbjct: 541 ECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWDEFKASGLISNVHTYGVMM 600

Query: 601 DGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIF 660
           D Y KANRMEDVEKLFNELVTKK+ELN+IVYNI IRA+C +GNV AALQLRD+MKSKGIF
Sbjct: 601 DVYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLRDDMKSKGIF 660

Query: 661 PTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEAT 720
           PTCA+YSSLIHGMC IG  EDAK LIDEMR+EGLLPNVVCYTALI GYCKLG+MD AEAT
Sbjct: 661 PTCATYSSLIHGMCNIGRVEDAKHLIDEMREEGLLPNVVCYTALIGGYCKLGQMDIAEAT 720

Query: 721 LREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCK 780
             EM SFNIRPNK TYTVMIDGYCK+GNM++A  LLSKMKESGIVPDVVTYNALTNGFCK
Sbjct: 721 WLEMTSFNIRPNKITYTVMIDGYCKIGNMEEANNLLSKMKESGIVPDVVTYNALTNGFCK 780

Query: 781 RKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
            KDMDKAFK CD+M+T GLSLDEITYTTL HG ++PTITSQD
Sbjct: 781 GKDMDKAFKTCDEMATGGLSLDEITYTTLVHGWNQPTITSQD 822

BLAST of Sed0011000 vs. NCBI nr
Match: XP_023542002.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023542009.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023542017.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1426.4 bits (3691), Expect = 0.0e+00
Identity = 702/822 (85.40%), Postives = 759/822 (92.34%), Query Frame = 0

Query: 1   MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLD 60
           MHLTRF INKT+PVLFPFSRRLACVLSTQP K+ HQ+ PWQLQ QLL  VSSILSNSSLD
Sbjct: 1   MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60

Query: 61  SSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLV 120
           SSKCRA+LPHLSPLEFDR+FFSVGLK+NPKTCLNFFYFASDSF F FTIRSYCIL+LLL+
Sbjct: 61  SSKCRALLPHLSPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILVLLLI 120

Query: 121 HSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHV 180
           +SK LPPARLLLIRLIDGKLPVL+ D N LHI IANALLGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180

Query: 181 YSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFR 240
           YSTQFRN GFGCAVD FY+F+++GIFPSLKTC+FLLS LVK NELEKCCEVFEVMS+G R
Sbjct: 181 YSTQFRNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKDNELEKCCEVFEVMSRGVR 240

Query: 241 PDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFEL 300
           PDVFLFTNVIN LCKGGKMENAIELF+KMEK GISPNVVTYNSIIHG CQNGRLDDAF+L
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQNGRLDDAFKL 300

Query: 301 KEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCK 360
           KEKM IEGVKPSLITYSVLINGLTKLE FD+ANHVLNEM+D GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360

Query: 361 MGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVT 420
           MGNI+EALKIRD+MISKNIT TSVTLY+LM GFCKSNQIE+AEN+L+EILSQGLSIN VT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMIGFCKSNQIERAENSLEEILSQGLSINRVT 420

Query: 421 CYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLL 480
           CYSVIHWLC +SRF S LR TM+MLSKNFRPSD LLTILVCGLCKDGK L+A +LWFRLL
Sbjct: 421 CYSVIHWLCTESRFDSALRFTMVMLSKNFRPSDHLLTILVCGLCKDGKHLDATELWFRLL 480

Query: 481 EKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVE 540
           EKGSPA+T TSNALIHGLCGAG ++EAVRILKEM +RGF LDRITYNTLILG CK GKVE
Sbjct: 481 EKGSPANTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540

Query: 541 ECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMM 600
           ECFRLK+EMTK GI+PDIYTCNLLLHGLCNAGKLD AIKLWDEFK +GLVSNV+TYGVMM
Sbjct: 541 ECFRLKDEMTKLGIEPDIYTCNLLLHGLCNAGKLDGAIKLWDEFKANGLVSNVYTYGVMM 600

Query: 601 DGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIF 660
           DGY KANRMEDVE+LFNE+VTKK+EL+TIVYNILIRANCHSGNVVAALQ+RD+MKSKG+F
Sbjct: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660

Query: 661 PTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEAT 720
           PTC++YSSLIHGMC +G  E+AK+LIDEMR EGLL NVVCYTALI GYCKLG+MD AE+T
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEST 720

Query: 721 LREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCK 780
           L EMISFNIRPNKFTYTVMIDGYCKLGNM++A KLLSKMKESGIVPDVVTYN LTNG  K
Sbjct: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLTNGLYK 780

Query: 781 RKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
            KDMD+A+KICDQMST  LSLDEITYTTL HG +RPTI SQD
Sbjct: 781 GKDMDEAYKICDQMSTARLSLDEITYTTLVHGWNRPTIASQD 822

BLAST of Sed0011000 vs. NCBI nr
Match: XP_022136653.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic, partial [Momordica charantia])

HSP 1 Score: 1422.9 bits (3682), Expect = 0.0e+00
Identity = 699/817 (85.56%), Postives = 745/817 (91.19%), Query Frame = 0

Query: 8   INKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLDSSKCRAI 67
           INKT+PVL P SRRLACVLSTQP K+ HQD PWQ Q QLL WVSS+LSNS+LDSSKCRA+
Sbjct: 2   INKTVPVLLPLSRRLACVLSTQPHKEHHQDPPWQFQDQLLYWVSSVLSNSTLDSSKCRAL 61

Query: 68  LPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLVHSKLLPP 127
           LPHLSPLEFD+LFFSVGL++NPKTCLNFFYFAS SF F FTIRSYCILILLLVHSK LPP
Sbjct: 62  LPHLSPLEFDQLFFSVGLRANPKTCLNFFYFASGSFKFRFTIRSYCILILLLVHSKFLPP 121

Query: 128 ARLLLIRLIDGKLPVLDS--DSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHVYSTQF 187
           ARLLLIRLIDGKLPV +S  +S+ LHI IANA+ GLTSVVGRFEWTQAFDLLIHVYSTQF
Sbjct: 122 ARLLLIRLIDGKLPVSNSNLNSDTLHIEIANAMSGLTSVVGRFEWTQAFDLLIHVYSTQF 181

Query: 188 RNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFRPDVFL 247
           RN GFGCAVDVFY+F+R+GIFPSLKTC+FLLS LVK NELEKCCEVFEVMSQG  PDVFL
Sbjct: 182 RNLGFGCAVDVFYLFARKGIFPSLKTCNFLLSSLVKGNELEKCCEVFEVMSQGVCPDVFL 241

Query: 248 FTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFELKEKMK 307
           FTN IN LCKGGKMENAIELFMKMEKL ISPNVVTYNSIIHGLCQNGRLDDAFE KEKM 
Sbjct: 242 FTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNGRLDDAFEFKEKMT 301

Query: 308 IEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIH 367
           IEGVKPSLITYSVLINGLTKLE FDKA HVLN+MID GFVPNAVVYNTLIDGYCKMGNI+
Sbjct: 302 IEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLIDGYCKMGNIN 361

Query: 368 EALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVTCYSVI 427
           EAL+IRD+MISKNITPTSVTLYTLMQGFCKS+QI+QAENAL EILSQGLSINPVTC+SVI
Sbjct: 362 EALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSINPVTCFSVI 421

Query: 428 HWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSP 487
           HWLC KSRFHS L+ TM MLS+NFRPSDQLLTILVCGLCKDGK  EA +LWFRLLEKGSP
Sbjct: 422 HWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELWFRLLEKGSP 481

Query: 488 ASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVEECFRL 547
           AST TSNAL+HGLCG G M+ AVRILKEM  RGF LD+ITYNTLILGCCK+GKVEECFR 
Sbjct: 482 ASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKEGKVEECFRF 541

Query: 548 KEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYK 607
           K+EMTK GI+PDIYTCN LLHGLCNAGKLDDAIKLWDEFK SGLVSNVHTYGV+MDG+ K
Sbjct: 542 KDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTYGVLMDGHCK 601

Query: 608 ANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIFPTCAS 667
           ANRMEDV+KLFNELVTKK+E NTIVYNILIRA CH+GN+VAA QLRD MK KGIFPTCA+
Sbjct: 602 ANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKGKGIFPTCAT 661

Query: 668 YSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEATLREMI 727
           YSSLIHGMC IG  EDAK L+DEMR EGLLPNVVCYTALI GYCKLG+MD AEATL EM 
Sbjct: 662 YSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLGQMDIAEATLLEMT 721

Query: 728 SFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCKRKDMD 787
           SF I+PNKFTYTVMIDGYCKLGNM++A KLLSKMKESGI+PDVVTYNALTNGFCK KDMD
Sbjct: 722 SFKIKPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIIPDVVTYNALTNGFCKGKDMD 781

Query: 788 KAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
           KAFKICDQMST GLSLDEITYTTL HG  RPT+TSQD
Sbjct: 782 KAFKICDQMSTGGLSLDEITYTTLVHGWDRPTVTSQD 818

BLAST of Sed0011000 vs. ExPASy Swiss-Prot
Match: Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 732.6 bits (1890), Expect = 4.8e-210
Identity = 374/761 (49.15%), Postives = 517/761 (67.94%), Query Frame = 0

Query: 33  KPHQDQPWQLQVQLLNWVSSILSNSSLDSSKCRAILPHLSPLEFDRLFFSVGLKSNPKTC 92
           +P + +       L   +SS+LS  SLD  +C+ ++  LSPLEFDRLF     K NPKT 
Sbjct: 63  RPDKSEETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTA 122

Query: 93  LNFFYFASDSFTFGFTIRSYCILILLLVHSKLLPPARLLLIRLIDGKLPVLDSDSNVLHI 152
           L+FF  ASDSF+F F++RSYC+LI LL+ + LL  AR++LIRLI+G +PVL        +
Sbjct: 123 LDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRV 182

Query: 153 GIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTC 212
            IA+A+  L+         +  DLLI VY TQF+  G   A+DVF V + +G+FPS  TC
Sbjct: 183 AIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTC 242

Query: 213 SFLLSCLVKANELEKCCEVFEVMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKL 272
           + LL+ LV+ANE +KCCE F+V+ +G  PDV+LFT  IN  CKGGK+E A++LF KME+ 
Sbjct: 243 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 302

Query: 273 GISPNVVTYNSIIHGLCQNGRLDDAFELKEKMKIEGVKPSLITYSVLINGLTKLENFDKA 332
           G++PNVVT+N++I GL   GR D+AF  KEKM   G++P+LITYS+L+ GLT+ +    A
Sbjct: 303 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 362

Query: 333 NHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQG 392
             VL EM   GF PN +VYN LID + + G++++A++I+D+M+SK ++ TS T  TL++G
Sbjct: 363 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 422

Query: 393 FCKSNQIEQAENALQEILSQGLSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPS 452
           +CK+ Q + AE  L+E+LS G ++N  +  SVI  LC    F S LR    ML +N  P 
Sbjct: 423 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 482

Query: 453 DQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILK 512
             LLT L+ GLCK GK  +A++LWF+ L KG    T TSNAL+HGLC AG + EA RI K
Sbjct: 483 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 542

Query: 513 EMSKRGFSLDRITYNTLILGCCKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAG 572
           E+  RG  +DR++YNTLI GCC K K++E F   +EM K G++PD YT ++L+ GL N  
Sbjct: 543 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 602

Query: 573 KLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYN 632
           K+++AI+ WD+ K +G++ +V+TY VM+DG  KA R E+ ++ F+E+++K ++ NT+VYN
Sbjct: 603 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 662

Query: 633 ILIRANCHSGNVVAALQLRDNMKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEMRDE 692
            LIRA C SG +  AL+LR++MK KGI P  A+Y+SLI GM  I   E+AK L +EMR E
Sbjct: 663 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 722

Query: 693 GLLPNVVCYTALIDGYCKLGKMDTAEATLREMISFNIRPNKFTYTVMIDGYCKLGNMDDA 752
           GL PNV  YTALIDGY KLG+M   E  LREM S N+ PNK TYTVMI GY + GN+ +A
Sbjct: 723 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 782

Query: 753 IKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFKICDQ 794
            +LL++M+E GIVPD +TY     G+ K+  + +AFK  D+
Sbjct: 783 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823

BLAST of Sed0011000 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-96
Identity = 234/803 (29.14%), Postives = 380/803 (47.32%), Query Frame = 0

Query: 83  VGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLVHSKLLPPARLLLIRLIDGKLPV 142
           +G   +PK  L FF F      F  +  S+CILI  LV + L  PA  LL  L+   L  
Sbjct: 78  IGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP 137

Query: 143 LDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFRNFGFGCAVDVF-YVFS 202
            D   NVL        L  +S         +FDLLI  Y    R       V VF  + +
Sbjct: 138 SDV-FNVLFSCYEKCKLSSSS---------SFDLLIQHYVRSRRVLD---GVLVFKMMIT 197

Query: 203 RRGIFPSLKTCSFLLSCLVKANELEKCCEVF-EVMSQGFRPDVFLFTNVINGLCKGGKME 262
           +  + P ++T S LL  LVK        E+F +++S G RPDV+++T VI  LC+   + 
Sbjct: 198 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 257

Query: 263 NAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFELKEKMKIEGVKPSLITYSVLI 322
            A E+   ME  G   N+V YN +I GLC+  ++ +A  +K+ +  + +KP ++TY  L+
Sbjct: 258 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 317

Query: 323 NGLTKLENFDKANHVLNEM-----------------------------------IDMGFV 382
            GL K++ F+    +++EM                                   +D G  
Sbjct: 318 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 377

Query: 383 PNAVVYNTLIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENA 442
           PN  VYN LID  CK    HEA  + D M    + P  VT   L+  FC+  +++ A + 
Sbjct: 378 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 437

Query: 443 LQEILSQGLSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCK 502
           L E++  GL ++     S+I+  C      +       M++K   P+    T L+ G C 
Sbjct: 438 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 497

Query: 503 DGKQLEAVKLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRIT 562
            GK  +A++L+  +  KG   S  T   L+ GL  AG +++AV++  EM++     +R+T
Sbjct: 498 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 557

Query: 563 YNTLILGCCKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFK 622
           YN +I G C++G + + F   +EMT+ GI PD Y+   L+HGLC  G+  +A    D   
Sbjct: 558 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 617

Query: 623 GSGLVSNVHTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVV 682
                 N   Y  ++ G+ +  ++E+   +  E+V + ++L+ + Y +LI  +    +  
Sbjct: 618 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 677

Query: 683 AALQLRDNMKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALI 742
               L   M  +G+ P    Y+S+I    K G  ++A  + D M +EG +PN V YTA+I
Sbjct: 678 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 737

Query: 743 DGYCKLGKMDTAEATLREMISFNIRPNKF------------------------------- 802
           +G CK G ++ AE    +M   +  PN+                                
Sbjct: 738 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 797

Query: 803 ----TYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFKI 814
               TY ++I G+C+ G +++A +L+++M   G+ PD +TY  + N  C+R D+ KA ++
Sbjct: 798 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 857

BLAST of Sed0011000 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 334.3 bits (856), Expect = 3.8e-90
Identity = 219/743 (29.48%), Postives = 343/743 (46.16%), Query Frame = 0

Query: 109 IRSYCILILLLVHSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRF 168
           ++  CI   +LV +++  PAR +L  L              L  G ++ + G      R 
Sbjct: 72  VQLVCITTHILVRARMYDPARHILKEL-------------SLMSGKSSFVFGALMTTYRL 131

Query: 169 --EWTQAFDLLIHVYSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANE-L 228
                  +D+LI VY    R      ++++F +    G  PS+ TC+ +L  +VK+ E +
Sbjct: 132 CNSNPSVYDILIRVY---LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 191

Query: 229 EKCCEVFEVMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSII 288
                + E++ +   PDV  F  +IN LC  G  E +  L  KMEK G +P +VTYN+++
Sbjct: 192 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 251

Query: 289 HGLCQNGRLDDAFELKEKMKIEGV-----------------------------------K 348
           H  C+ GR   A EL + MK +GV                                    
Sbjct: 252 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 311

Query: 349 PSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIHEALKI 408
           P+ +TY+ LING +       A+ +LNEM+  G  PN V +N LIDG+   GN  EALK+
Sbjct: 312 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 371

Query: 409 RDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVTCYSVIHWLCM 468
             MM +K +TP+ V+   L+ G CK+ + + A      +   G+ +  +T   +I  LC 
Sbjct: 372 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 431

Query: 469 KSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSPASTPT 528
                  +     M      P     + L+ G CK G+   A ++  R+   G   +   
Sbjct: 432 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 491

Query: 529 SNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVEECFRLKEEMT 588
            + LI+  C  G +KEA+RI + M   G + D  T+N L+   CK GKV E       MT
Sbjct: 492 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 551

Query: 589 KHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYKANRME 648
             GI P+  + + L++G  N+G+   A  ++DE    G      TYG ++ G  K   + 
Sbjct: 552 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 611

Query: 649 DVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIFPTCASYSSLI 708
           + EK    L      ++T++YN L+ A C SGN+  A+ L   M  + I P   +Y+SLI
Sbjct: 612 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 671

Query: 709 HGMCKIGCDEDAKRLIDEMRDEG-LLPNVVCYTALIDGYCKLGKMDTAEATLREMISFNI 768
            G+C+ G    A     E    G +LPN V YT  +DG  K G+         +M +   
Sbjct: 672 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 731

Query: 769 RPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFK 813
            P+  T   MIDGY ++G ++    LL +M      P++ TYN L +G+ KRKD+  +F 
Sbjct: 732 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 791

BLAST of Sed0011000 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.1e-84
Identity = 234/829 (28.23%), Postives = 404/829 (48.73%), Query Frame = 0

Query: 5   RFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLDSS-K 64
           +F+ + T+P   P +RR  C +S      P ++      + + + + SILS  +   S  
Sbjct: 26  KFSTDVTVP--SPVTRRQFCSVSPLLRNLPEEESD---SMSVPHRLLSILSKPNWHKSPS 85

Query: 65  CRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLVHS- 124
            ++++  +SP     LF    L  +PKT LNF ++ S +  +  ++ SY  L+ LL+++ 
Sbjct: 86  LKSMVSAISPSHVSSLF---SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNG 145

Query: 125 --KLLPPARLLLIRLIDG---KLPVLDSDSNV-----------LHIGIANALLGLTSVVG 184
              ++   RLL+I+  D     L VLD    +           L IG  N LL   +  G
Sbjct: 146 YVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFG 205

Query: 185 RF-EWTQAF-DLL-------IHVYSTQFRNF-GFGCAVDVFYVFSR---RGIFPSLKTCS 244
              E  Q + ++L       I+ Y+     +   G   +     S+    G+ P   T +
Sbjct: 206 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT 265

Query: 245 FLLSCLVKANELEKCCEVF-EVMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKL 304
            L+    +  +L+   +VF E+  +G R +   +T++I+GLC   +++ A++LF+KM+  
Sbjct: 266 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 325

Query: 305 GISPNVVTYNSIIHGLCQNGRLDDAFELKEKMKIEGVKPSLITYSVLINGLTKLENFDKA 364
              P V TY  +I  LC + R  +A  L ++M+  G+KP++ TY+VLI+ L     F+KA
Sbjct: 326 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 385

Query: 365 NHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQG 424
             +L +M++ G +PN + YN LI+GYCK G I +A+ + ++M S+ ++P + T   L++G
Sbjct: 386 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 445

Query: 425 FCKSNQIEQAENALQEILSQGLSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPS 484
           +CKSN + +A   L ++L + +  + VT  S+I   C    F S  R   LM  +   P 
Sbjct: 446 YCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 505

Query: 485 DQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILK 544
               T ++  LCK  +  EA  L+  L +KG   +     ALI G C AG + EA  +L+
Sbjct: 506 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 565

Query: 545 EMSKRGFSLDRITYNTLILGCCKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAG 604
           +M  +    + +T+N LI G C  GK++E   L+E+M K G+QP + T  +L+H L   G
Sbjct: 566 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 625

Query: 605 KLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYN 664
             D A   + +   SG   + HTY   +  Y +  R+ D E +  ++    +  +   Y+
Sbjct: 626 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 685

Query: 665 ILIRANCHSGNVVAALQLRDNMKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEM--R 724
            LI+     G    A  +   M+  G  P+  ++ SLI            K L++    +
Sbjct: 686 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI------------KHLLEMKYGK 745

Query: 725 DEGLLPNVVCYTALIDGYCKLGKMDTAEATLREMISFNIRPNKFTYTVMIDGYCKLGNMD 784
            +G  P +   + +++        DT    L +M+  ++ PN  +Y  +I G C++GN+ 
Sbjct: 746 QKGSEPELCAMSNMME-------FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 805

Query: 785 DAIKLLSKM-KESGIVPDVVTYNALTNGFCKRKDMDKAFKICDQMSTEG 799
            A K+   M +  GI P  + +NAL +  CK K  ++A K+ D M   G
Sbjct: 806 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826

BLAST of Sed0011000 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.2e-83
Identity = 183/626 (29.23%), Postives = 308/626 (49.20%), Query Frame = 0

Query: 234 VMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGR 293
           ++ +G  P  + +  +I+GLCK  ++E+A  L ++M+ LG+S +  TY+ +I GL +   
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 294 LDDAFELKEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNT 353
            D A  L  +M   G+      Y   I  ++K    +KA  + + MI  G +P A  Y +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 354 LIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQG 413
           LI+GYC+  N+ +  ++   M  +NI  +  T  T+++G C S  ++ A N ++E+++ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447

Query: 414 LSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAV 473
              N V   ++I      SRF   +R    M  +   P       L+ GL K  +  EA 
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 474 KLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGC 533
                ++E G   +  T  A I G   A     A + +KEM + G   +++    LI   
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567

Query: 534 CKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNV 593
           CKKGKV E       M   GI  D  T  +L++GL    K+DDA +++ E +G G+  +V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627

Query: 594 HTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDN 653
            +YGV+++G+ K   M+    +F+E+V + +  N I+YN+L+   C SG +  A +L D 
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 654 MKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKL-- 713
           M  KG+ P   +Y ++I G CK G   +A RL DEM+ +GL+P+   YT L+DG C+L  
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 714 --------------------------------GKMDTAEATLREMISFNI----RPNKFT 773
                                           GK +     L  ++  +     +PN  T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 774 YTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFKICDQMS 822
           Y +MID  CK GN++ A +L  +M+ + ++P V+TY +L NG+ K     + F + D+  
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

BLAST of Sed0011000 vs. ExPASy TrEMBL
Match: A0A6J1ETG9 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111437580 PE=4 SV=1)

HSP 1 Score: 1431.4 bits (3704), Expect = 0.0e+00
Identity = 706/822 (85.89%), Postives = 747/822 (90.88%), Query Frame = 0

Query: 1   MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLD 60
           MHLTRF INKT+PV+FPFSR++ACVLST+P K+ HQD PWQLQ QLL  VSSILSNSSLD
Sbjct: 1   MHLTRFKINKTVPVVFPFSRQVACVLSTEPHKEHHQDPPWQLQDQLLYSVSSILSNSSLD 60

Query: 61  SSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLV 120
           SSKCRA+LPHLSP +FD LFFSVGLK+NPKTCLNFFYFASDSF F FTIRSYC+LILLLV
Sbjct: 61  SSKCRALLPHLSPFQFDHLFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCLLILLLV 120

Query: 121 HSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHV 180
           HSK LPPARLLLIRLIDGKLPVL+SDSN LHI IAN L GLTSVVGRFE T AFDLLIHV
Sbjct: 121 HSKFLPPARLLLIRLIDGKLPVLNSDSNKLHIEIANELFGLTSVVGRFECTHAFDLLIHV 180

Query: 181 YSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFR 240
           YSTQFRN GF  AVDVFY+F+R GIFPSLKTC+FLLS LVKANELEKCCEVFEVMSQG R
Sbjct: 181 YSTQFRNLGFSYAVDVFYLFARNGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSQGVR 240

Query: 241 PDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFEL 300
           PDVFLFTNVIN LCKGGKMENA+EL M MEKLGISPNVVTYNSIIHGLCQNGRL DAFEL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQNGRLGDAFEL 300

Query: 301 KEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCK 360
           KEKM IEGVKPSLITYSVLINGLTKLE FDKAN VLNEM+  GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVGAGFVPNAVVYNTLIDGYCK 360

Query: 361 MGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVT 420
           MG I+EALKIRD+M+SKNITPTSVTLYTL+QGFCKSNQIEQAEN L+EILSQG  INPVT
Sbjct: 361 MGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKSNQIEQAENTLEEILSQGFPINPVT 420

Query: 421 CYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLL 480
           CYSVIHWLC KSRFH  LR TM+MLSKNFRPSDQLLTILVCGLCKDGK LEA +LWFRL 
Sbjct: 421 CYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLEATELWFRLF 480

Query: 481 EKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVE 540
           EKGSPAST TSNALIHGLCGAG M EAVRILKEM +RGFSLDRITYNT ILGCCK+GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTFILGCCKEGKVE 540

Query: 541 ECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMM 600
           ECFRLKEEMT  GIQPDIYTCNLLL+GLCNAGKLDDAIKLW EFK SGL+SNVHTYGVMM
Sbjct: 541 ECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWGEFKASGLISNVHTYGVMM 600

Query: 601 DGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIF 660
           D Y KANRMEDVEKLFNELVTKK+ELN+IVYNI IRA+C +GNV AALQLRD+MKSKGIF
Sbjct: 601 DVYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLRDDMKSKGIF 660

Query: 661 PTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEAT 720
           PTCA+YSSLIHGMC IG  EDAKRLIDEMR+EGLLPNVVCYTALI GYCKLG+MD AEAT
Sbjct: 661 PTCATYSSLIHGMCNIGLVEDAKRLIDEMREEGLLPNVVCYTALIGGYCKLGQMDIAEAT 720

Query: 721 LREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCK 780
             EM S NIRPNK TYTVMIDGYCKLGNM++A  LLSKMKESGIVPDVVTYNALTNGFCK
Sbjct: 721 FLEMTSLNIRPNKITYTVMIDGYCKLGNMEEANNLLSKMKESGIVPDVVTYNALTNGFCK 780

Query: 781 RKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
            KDMDKAFK CD+M+T GLSLDEITYTTL HG ++PTITSQD
Sbjct: 781 GKDMDKAFKTCDEMATGGLSLDEITYTTLVHGWNQPTITSQD 822

BLAST of Sed0011000 vs. ExPASy TrEMBL
Match: A0A6J1C854 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008305 PE=4 SV=1)

HSP 1 Score: 1422.9 bits (3682), Expect = 0.0e+00
Identity = 699/817 (85.56%), Postives = 745/817 (91.19%), Query Frame = 0

Query: 8   INKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLDSSKCRAI 67
           INKT+PVL P SRRLACVLSTQP K+ HQD PWQ Q QLL WVSS+LSNS+LDSSKCRA+
Sbjct: 2   INKTVPVLLPLSRRLACVLSTQPHKEHHQDPPWQFQDQLLYWVSSVLSNSTLDSSKCRAL 61

Query: 68  LPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLVHSKLLPP 127
           LPHLSPLEFD+LFFSVGL++NPKTCLNFFYFAS SF F FTIRSYCILILLLVHSK LPP
Sbjct: 62  LPHLSPLEFDQLFFSVGLRANPKTCLNFFYFASGSFKFRFTIRSYCILILLLVHSKFLPP 121

Query: 128 ARLLLIRLIDGKLPVLDS--DSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHVYSTQF 187
           ARLLLIRLIDGKLPV +S  +S+ LHI IANA+ GLTSVVGRFEWTQAFDLLIHVYSTQF
Sbjct: 122 ARLLLIRLIDGKLPVSNSNLNSDTLHIEIANAMSGLTSVVGRFEWTQAFDLLIHVYSTQF 181

Query: 188 RNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFRPDVFL 247
           RN GFGCAVDVFY+F+R+GIFPSLKTC+FLLS LVK NELEKCCEVFEVMSQG  PDVFL
Sbjct: 182 RNLGFGCAVDVFYLFARKGIFPSLKTCNFLLSSLVKGNELEKCCEVFEVMSQGVCPDVFL 241

Query: 248 FTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFELKEKMK 307
           FTN IN LCKGGKMENAIELFMKMEKL ISPNVVTYNSIIHGLCQNGRLDDAFE KEKM 
Sbjct: 242 FTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNGRLDDAFEFKEKMT 301

Query: 308 IEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIH 367
           IEGVKPSLITYSVLINGLTKLE FDKA HVLN+MID GFVPNAVVYNTLIDGYCKMGNI+
Sbjct: 302 IEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLIDGYCKMGNIN 361

Query: 368 EALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVTCYSVI 427
           EAL+IRD+MISKNITPTSVTLYTLMQGFCKS+QI+QAENAL EILSQGLSINPVTC+SVI
Sbjct: 362 EALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSINPVTCFSVI 421

Query: 428 HWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSP 487
           HWLC KSRFHS L+ TM MLS+NFRPSDQLLTILVCGLCKDGK  EA +LWFRLLEKGSP
Sbjct: 422 HWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELWFRLLEKGSP 481

Query: 488 ASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVEECFRL 547
           AST TSNAL+HGLCG G M+ AVRILKEM  RGF LD+ITYNTLILGCCK+GKVEECFR 
Sbjct: 482 ASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKEGKVEECFRF 541

Query: 548 KEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYK 607
           K+EMTK GI+PDIYTCN LLHGLCNAGKLDDAIKLWDEFK SGLVSNVHTYGV+MDG+ K
Sbjct: 542 KDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTYGVLMDGHCK 601

Query: 608 ANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIFPTCAS 667
           ANRMEDV+KLFNELVTKK+E NTIVYNILIRA CH+GN+VAA QLRD MK KGIFPTCA+
Sbjct: 602 ANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKGKGIFPTCAT 661

Query: 668 YSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEATLREMI 727
           YSSLIHGMC IG  EDAK L+DEMR EGLLPNVVCYTALI GYCKLG+MD AEATL EM 
Sbjct: 662 YSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLGQMDIAEATLLEMT 721

Query: 728 SFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCKRKDMD 787
           SF I+PNKFTYTVMIDGYCKLGNM++A KLLSKMKESGI+PDVVTYNALTNGFCK KDMD
Sbjct: 722 SFKIKPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIIPDVVTYNALTNGFCKGKDMD 781

Query: 788 KAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
           KAFKICDQMST GLSLDEITYTTL HG  RPT+TSQD
Sbjct: 782 KAFKICDQMSTGGLSLDEITYTTLVHGWDRPTVTSQD 818

BLAST of Sed0011000 vs. ExPASy TrEMBL
Match: A0A6J1FWH7 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447546 PE=4 SV=1)

HSP 1 Score: 1422.5 bits (3681), Expect = 0.0e+00
Identity = 702/822 (85.40%), Postives = 755/822 (91.85%), Query Frame = 0

Query: 1   MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLD 60
           MHLTRF INKTIPVLFPFSRRLACVLSTQP K+ HQ+ PWQLQ QLL  VSSILSNSSLD
Sbjct: 1   MHLTRFKINKTIPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60

Query: 61  SSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLV 120
           SSKCRA+ PHLSPLEFDR+FFSVGLK+NPKTCLNFFYFASDSF F FTIRSYCILILLL+
Sbjct: 61  SSKCRALFPHLSPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120

Query: 121 HSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHV 180
           +SK LPPARLLLIRLIDGKLP+L+ D N LHI IAN LLGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPLLNFDLNKLHIEIANTLLGLTSVVGRFEWTQAFDLLIHV 180

Query: 181 YSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFR 240
           YSTQFRN GFGCA D FY+F+++GIFPSLKTC+FLLS LVKANELEKCCEVFEVMS+G R
Sbjct: 181 YSTQFRNLGFGCAFDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240

Query: 241 PDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFEL 300
           PDVFLFTNVIN LCKGGKMENAIELF+KMEK GISPNVVTYNSIIHG CQNGRLDDAF+L
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQNGRLDDAFKL 300

Query: 301 KEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCK 360
           KEKM IEGVKPSLITYSVLINGLTKLENFDKANHVLNEM+D GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360

Query: 361 MGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVT 420
           MGNI+EALKIRD+MISKNIT TSVTLY+LM GFCKSNQIE+AEN+L+EILSQGLSIN VT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420

Query: 421 CYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLL 480
           CYSVIHWLC KSRF S LR TM+MLSKNFRPSDQLLTILVCGLCKDGK L+A +LWFRLL
Sbjct: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLL 480

Query: 481 EKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVE 540
           EKGSPAST TSNALIHGLCGAG ++EAVRILKEM +RGF  DRITYNTLILG CK GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPSDRITYNTLILGYCKAGKVE 540

Query: 541 ECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMM 600
           ECF L +EM K GI+PDIYTCNLLLHGLCNAG LD AIKLWDEFK +GLVSNV+TYGVMM
Sbjct: 541 ECFTLIDEMIKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600

Query: 601 DGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIF 660
           DGY KANRMEDVE+LFNE+VTKK+EL+TIVYNILIRANCHSGNVVAALQ+RD+MKSKG+F
Sbjct: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660

Query: 661 PTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEAT 720
           PTC++YSSLIHGMC +G  E+AK+LIDEMR EGLL NVVCYTALI GYCKLG+MD AEAT
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720

Query: 721 LREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCK 780
           L EMISFNIRPNKFTYTVMIDGYCKLGNM++A KLLSKMKESGIVPDVVTYN L+NG  K
Sbjct: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780

Query: 781 RKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
            KDMDKA+KICDQMST GLSLDEITYTTL HG +RPTI SQ+
Sbjct: 781 GKDMDKAYKICDQMSTAGLSLDEITYTTLVHGWNRPTIASQN 822

BLAST of Sed0011000 vs. ExPASy TrEMBL
Match: A0A6J1J2L6 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482844 PE=4 SV=1)

HSP 1 Score: 1421.0 bits (3677), Expect = 0.0e+00
Identity = 700/822 (85.16%), Postives = 745/822 (90.63%), Query Frame = 0

Query: 1   MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLD 60
           MHLTRF INKT+PV+FPFSR++ACVLST+P K+ HQD PWQLQ QLL  VSSILSNSSLD
Sbjct: 1   MHLTRFKINKTLPVVFPFSRQVACVLSTEPHKEHHQDPPWQLQDQLLYSVSSILSNSSLD 60

Query: 61  SSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLV 120
           SSKCRA+LPHLSP +FD+LFFSVGLK+NPKTCLNFFYFASDSF F FTIRSYC+LILLLV
Sbjct: 61  SSKCRALLPHLSPFQFDQLFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCLLILLLV 120

Query: 121 HSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHV 180
           HSK LPPARLLLIRLIDGKLPVL+SDSN LHI IAN L GLTSVVGRFE T AFDLLIHV
Sbjct: 121 HSKFLPPARLLLIRLIDGKLPVLNSDSNKLHIEIANELFGLTSVVGRFECTHAFDLLIHV 180

Query: 181 YSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFR 240
           YSTQFRN  F  AVDVFY+F+R+GIFPSLKTC+FLLS LVKANELEKCCEVFEVMSQG R
Sbjct: 181 YSTQFRNLCFSYAVDVFYLFARKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSQGVR 240

Query: 241 PDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFEL 300
           PDVFLFTNVIN LCKGGKMENA+EL M MEKLGISPNVVTYNS+IHGLCQNGRL DAFEL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSVIHGLCQNGRLGDAFEL 300

Query: 301 KEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCK 360
           KEKM IEGVKPSLITYSVLINGLTKLE FDKAN VLNEM+D GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDAGFVPNAVVYNTLIDGYCK 360

Query: 361 MGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVT 420
           MG I+EALKIRD+M+SKNITPTSVT YTL+QGFCKSNQIEQA+N L+EILSQG  INPVT
Sbjct: 361 MGKINEALKIRDVMVSKNITPTSVTFYTLLQGFCKSNQIEQAQNTLEEILSQGFPINPVT 420

Query: 421 CYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLL 480
           CYSVIHWLC K RFH  LR T +ML KNFRPSDQLLTILVCGLCKDGK LEA +LWFRLL
Sbjct: 421 CYSVIHWLCTKFRFHYALRFTTVMLLKNFRPSDQLLTILVCGLCKDGKHLEATELWFRLL 480

Query: 481 EKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVE 540
           EKGSPAST TSNALIHGLCGAG M EAVRILKEM +RGFSLDRITYNTLILGCCK+GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLILGCCKEGKVE 540

Query: 541 ECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMM 600
           ECFRLKEEMT  GIQPDIYTCN LL+GLCNAGKLDDAIKLWDEFK SGL+SNVHTYGVMM
Sbjct: 541 ECFRLKEEMTNQGIQPDIYTCNFLLYGLCNAGKLDDAIKLWDEFKASGLISNVHTYGVMM 600

Query: 601 DGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIF 660
           D Y KANRMEDVEKLFNELVTKK+ELN+IVYNI IRA+C +GNV AALQLRD+MKSKGIF
Sbjct: 601 DAYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLRDDMKSKGIF 660

Query: 661 PTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEAT 720
           PTCA+YSSLIHGMC IG  EDAK LIDEMR+EGLLPNVVCYTALI GYCKLG+MD AEAT
Sbjct: 661 PTCATYSSLIHGMCNIGRVEDAKHLIDEMREEGLLPNVVCYTALIGGYCKLGQMDIAEAT 720

Query: 721 LREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCK 780
             EM S NI PNK TYTVMIDGYCKLGNM++A  LLSKMKESGIVPDVVTYNALTNGFCK
Sbjct: 721 WLEMTSLNISPNKITYTVMIDGYCKLGNMEEANNLLSKMKESGIVPDVVTYNALTNGFCK 780

Query: 781 RKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
            KDMDKAFK CD+M+T GLSLDEITYTTL HG ++PTITSQD
Sbjct: 781 GKDMDKAFKTCDEMATGGLSLDEITYTTLVHGWNQPTITSQD 822

BLAST of Sed0011000 vs. ExPASy TrEMBL
Match: A0A6J1ISC0 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478853 PE=4 SV=1)

HSP 1 Score: 1401.3 bits (3626), Expect = 0.0e+00
Identity = 693/822 (84.31%), Postives = 750/822 (91.24%), Query Frame = 0

Query: 1   MHLTRFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLD 60
           MHLTRF INKT+PVLFPFSRRLA VLSTQP K+ HQ+ PWQLQ  LL  VSSILSNSSLD
Sbjct: 1   MHLTRFKINKTVPVLFPFSRRLASVLSTQPHKEHHQEPPWQLQDXLLYSVSSILSNSSLD 60

Query: 61  SSKCRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLV 120
           SSKCRA+ PHL PLEFDR+FFSVGLK+NPKTCLNFFYFASDSF F FTIRSYCILILLL+
Sbjct: 61  SSKCRALFPHLFPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120

Query: 121 HSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHV 180
           +SK LPPARLLLIRLIDGKLPVL+ D + L+I IANALLGLTSVVGRFEWTQA DLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLSKLYISIANALLGLTSVVGRFEWTQALDLLIHV 180

Query: 181 YSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANELEKCCEVFEVMSQGFR 240
           YSTQFRN GFGCAVD FY+F+R+GIFPSLKTC+FLLS LVKANELEKCCEVFEVMS+G R
Sbjct: 181 YSTQFRNLGFGCAVDAFYLFARKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240

Query: 241 PDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFEL 300
           PDVFLFTNVIN LCKGGKMENAIELF+KMEK GISPNVVTYNSIIHG CQNGRLDDAF+L
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQNGRLDDAFKL 300

Query: 301 KEKMKIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCK 360
           KEKM IEGVKPSLITYSVLINGLTKLE FD+ANHVLNEM+D GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360

Query: 361 MGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVT 420
           MGNI+EALKIRD+MISKNIT TSVTLY+LM GFCKSNQI+ AEN+L+EILSQGLSIN VT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMIGFCKSNQIKLAENSLEEILSQGLSINRVT 420

Query: 421 CYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLL 480
           CYSVIHWLC KSRF S LR TM+MLSKNFR SDQLLTILVCGLCKDGK L+A +LWFRLL
Sbjct: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRLSDQLLTILVCGLCKDGKHLDATELWFRLL 480

Query: 481 EKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVE 540
           EKGSPAST TSNALIHGLCGAG ++EAVRILKEM +RGF LDRITYNTLILG CK GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540

Query: 541 ECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMM 600
           ECFRLK++MTK GI+ DIYTCN LLHGLCNAGKLD AIKLWDEFK +GLVSNV+TYGVMM
Sbjct: 541 ECFRLKDKMTKLGIETDIYTCNFLLHGLCNAGKLDGAIKLWDEFKANGLVSNVYTYGVMM 600

Query: 601 DGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIF 660
           DGY KA RMEDVE+LFNE+VTKK+EL+TIVYNILIRANCHSGNVVAAL+  D+MKSKG+F
Sbjct: 601 DGYCKAKRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALRFCDDMKSKGMF 660

Query: 661 PTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALIDGYCKLGKMDTAEAT 720
           PTC++YSSLIHGMC +G  E+AK+LIDEMR+EGLL NVVCYTALI GYCKLG+MD AEAT
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMREEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720

Query: 721 LREMISFNIRPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCK 780
           L EMISFNIRPNKFTYTVMIDGYCKLGNM++A KLLSKMKESGIVPDVVTYN LTNG  K
Sbjct: 721 LHEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLTNGLYK 780

Query: 781 RKDMDKAFKICDQMSTEGLSLDEITYTTLAHGCSRPTITSQD 823
            KDMDKA+KICDQMST GLSLDEITY+TL HG + PTI SQ+
Sbjct: 781 GKDMDKAYKICDQMSTAGLSLDEITYSTLVHGWNXPTIASQN 822

BLAST of Sed0011000 vs. TAIR 10
Match: AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 732.6 bits (1890), Expect = 3.4e-211
Identity = 374/761 (49.15%), Postives = 517/761 (67.94%), Query Frame = 0

Query: 33  KPHQDQPWQLQVQLLNWVSSILSNSSLDSSKCRAILPHLSPLEFDRLFFSVGLKSNPKTC 92
           +P + +       L   +SS+LS  SLD  +C+ ++  LSPLEFDRLF     K NPKT 
Sbjct: 50  RPDKSEETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTA 109

Query: 93  LNFFYFASDSFTFGFTIRSYCILILLLVHSKLLPPARLLLIRLIDGKLPVLDSDSNVLHI 152
           L+FF  ASDSF+F F++RSYC+LI LL+ + LL  AR++LIRLI+G +PVL        +
Sbjct: 110 LDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRV 169

Query: 153 GIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTC 212
            IA+A+  L+         +  DLLI VY TQF+  G   A+DVF V + +G+FPS  TC
Sbjct: 170 AIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTC 229

Query: 213 SFLLSCLVKANELEKCCEVFEVMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKL 272
           + LL+ LV+ANE +KCCE F+V+ +G  PDV+LFT  IN  CKGGK+E A++LF KME+ 
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289

Query: 273 GISPNVVTYNSIIHGLCQNGRLDDAFELKEKMKIEGVKPSLITYSVLINGLTKLENFDKA 332
           G++PNVVT+N++I GL   GR D+AF  KEKM   G++P+LITYS+L+ GLT+ +    A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349

Query: 333 NHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQG 392
             VL EM   GF PN +VYN LID + + G++++A++I+D+M+SK ++ TS T  TL++G
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409

Query: 393 FCKSNQIEQAENALQEILSQGLSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPS 452
           +CK+ Q + AE  L+E+LS G ++N  +  SVI  LC    F S LR    ML +N  P 
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469

Query: 453 DQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILK 512
             LLT L+ GLCK GK  +A++LWF+ L KG    T TSNAL+HGLC AG + EA RI K
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529

Query: 513 EMSKRGFSLDRITYNTLILGCCKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAG 572
           E+  RG  +DR++YNTLI GCC K K++E F   +EM K G++PD YT ++L+ GL N  
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589

Query: 573 KLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYN 632
           K+++AI+ WD+ K +G++ +V+TY VM+DG  KA R E+ ++ F+E+++K ++ NT+VYN
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649

Query: 633 ILIRANCHSGNVVAALQLRDNMKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEMRDE 692
            LIRA C SG +  AL+LR++MK KGI P  A+Y+SLI GM  I   E+AK L +EMR E
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709

Query: 693 GLLPNVVCYTALIDGYCKLGKMDTAEATLREMISFNIRPNKFTYTVMIDGYCKLGNMDDA 752
           GL PNV  YTALIDGY KLG+M   E  LREM S N+ PNK TYTVMI GY + GN+ +A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769

Query: 753 IKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFKICDQ 794
            +LL++M+E GIVPD +TY     G+ K+  + +AFK  D+
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810

BLAST of Sed0011000 vs. TAIR 10
Match: AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 732.6 bits (1890), Expect = 3.4e-211
Identity = 374/761 (49.15%), Postives = 517/761 (67.94%), Query Frame = 0

Query: 33  KPHQDQPWQLQVQLLNWVSSILSNSSLDSSKCRAILPHLSPLEFDRLFFSVGLKSNPKTC 92
           +P + +       L   +SS+LS  SLD  +C+ ++  LSPLEFDRLF     K NPKT 
Sbjct: 50  RPDKSEETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTA 109

Query: 93  LNFFYFASDSFTFGFTIRSYCILILLLVHSKLLPPARLLLIRLIDGKLPVLDSDSNVLHI 152
           L+FF  ASDSF+F F++RSYC+LI LL+ + LL  AR++LIRLI+G +PVL        +
Sbjct: 110 LDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRV 169

Query: 153 GIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTC 212
            IA+A+  L+         +  DLLI VY TQF+  G   A+DVF V + +G+FPS  TC
Sbjct: 170 AIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTC 229

Query: 213 SFLLSCLVKANELEKCCEVFEVMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKL 272
           + LL+ LV+ANE +KCCE F+V+ +G  PDV+LFT  IN  CKGGK+E A++LF KME+ 
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289

Query: 273 GISPNVVTYNSIIHGLCQNGRLDDAFELKEKMKIEGVKPSLITYSVLINGLTKLENFDKA 332
           G++PNVVT+N++I GL   GR D+AF  KEKM   G++P+LITYS+L+ GLT+ +    A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349

Query: 333 NHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQG 392
             VL EM   GF PN +VYN LID + + G++++A++I+D+M+SK ++ TS T  TL++G
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409

Query: 393 FCKSNQIEQAENALQEILSQGLSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPS 452
           +CK+ Q + AE  L+E+LS G ++N  +  SVI  LC    F S LR    ML +N  P 
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469

Query: 453 DQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILK 512
             LLT L+ GLCK GK  +A++LWF+ L KG    T TSNAL+HGLC AG + EA RI K
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529

Query: 513 EMSKRGFSLDRITYNTLILGCCKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAG 572
           E+  RG  +DR++YNTLI GCC K K++E F   +EM K G++PD YT ++L+ GL N  
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589

Query: 573 KLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYN 632
           K+++AI+ WD+ K +G++ +V+TY VM+DG  KA R E+ ++ F+E+++K ++ NT+VYN
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649

Query: 633 ILIRANCHSGNVVAALQLRDNMKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEMRDE 692
            LIRA C SG +  AL+LR++MK KGI P  A+Y+SLI GM  I   E+AK L +EMR E
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709

Query: 693 GLLPNVVCYTALIDGYCKLGKMDTAEATLREMISFNIRPNKFTYTVMIDGYCKLGNMDDA 752
           GL PNV  YTALIDGY KLG+M   E  LREM S N+ PNK TYTVMI GY + GN+ +A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769

Query: 753 IKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFKICDQ 794
            +LL++M+E GIVPD +TY     G+ K+  + +AFK  D+
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810

BLAST of Sed0011000 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 355.9 bits (912), Expect = 8.6e-98
Identity = 234/803 (29.14%), Postives = 380/803 (47.32%), Query Frame = 0

Query: 83  VGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLVHSKLLPPARLLLIRLIDGKLPV 142
           +G   +PK  L FF F      F  +  S+CILI  LV + L  PA  LL  L+   L  
Sbjct: 78  IGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP 137

Query: 143 LDSDSNVLHIGIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFRNFGFGCAVDVF-YVFS 202
            D   NVL        L  +S         +FDLLI  Y    R       V VF  + +
Sbjct: 138 SDV-FNVLFSCYEKCKLSSSS---------SFDLLIQHYVRSRRVLD---GVLVFKMMIT 197

Query: 203 RRGIFPSLKTCSFLLSCLVKANELEKCCEVF-EVMSQGFRPDVFLFTNVINGLCKGGKME 262
           +  + P ++T S LL  LVK        E+F +++S G RPDV+++T VI  LC+   + 
Sbjct: 198 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 257

Query: 263 NAIELFMKMEKLGISPNVVTYNSIIHGLCQNGRLDDAFELKEKMKIEGVKPSLITYSVLI 322
            A E+   ME  G   N+V YN +I GLC+  ++ +A  +K+ +  + +KP ++TY  L+
Sbjct: 258 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 317

Query: 323 NGLTKLENFDKANHVLNEM-----------------------------------IDMGFV 382
            GL K++ F+    +++EM                                   +D G  
Sbjct: 318 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 377

Query: 383 PNAVVYNTLIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENA 442
           PN  VYN LID  CK    HEA  + D M    + P  VT   L+  FC+  +++ A + 
Sbjct: 378 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 437

Query: 443 LQEILSQGLSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCK 502
           L E++  GL ++     S+I+  C      +       M++K   P+    T L+ G C 
Sbjct: 438 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 497

Query: 503 DGKQLEAVKLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRIT 562
            GK  +A++L+  +  KG   S  T   L+ GL  AG +++AV++  EM++     +R+T
Sbjct: 498 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 557

Query: 563 YNTLILGCCKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFK 622
           YN +I G C++G + + F   +EMT+ GI PD Y+   L+HGLC  G+  +A    D   
Sbjct: 558 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 617

Query: 623 GSGLVSNVHTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYNILIRANCHSGNVV 682
                 N   Y  ++ G+ +  ++E+   +  E+V + ++L+ + Y +LI  +    +  
Sbjct: 618 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 677

Query: 683 AALQLRDNMKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEMRDEGLLPNVVCYTALI 742
               L   M  +G+ P    Y+S+I    K G  ++A  + D M +EG +PN V YTA+I
Sbjct: 678 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 737

Query: 743 DGYCKLGKMDTAEATLREMISFNIRPNKF------------------------------- 802
           +G CK G ++ AE    +M   +  PN+                                
Sbjct: 738 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 797

Query: 803 ----TYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFKI 814
               TY ++I G+C+ G +++A +L+++M   G+ PD +TY  + N  C+R D+ KA ++
Sbjct: 798 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 857

BLAST of Sed0011000 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 334.3 bits (856), Expect = 2.7e-91
Identity = 219/743 (29.48%), Postives = 343/743 (46.16%), Query Frame = 0

Query: 109 IRSYCILILLLVHSKLLPPARLLLIRLIDGKLPVLDSDSNVLHIGIANALLGLTSVVGRF 168
           ++  CI   +LV +++  PAR +L  L              L  G ++ + G      R 
Sbjct: 112 VQLVCITTHILVRARMYDPARHILKEL-------------SLMSGKSSFVFGALMTTYRL 171

Query: 169 --EWTQAFDLLIHVYSTQFRNFGFGCAVDVFYVFSRRGIFPSLKTCSFLLSCLVKANE-L 228
                  +D+LI VY    R      ++++F +    G  PS+ TC+ +L  +VK+ E +
Sbjct: 172 CNSNPSVYDILIRVY---LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 231

Query: 229 EKCCEVFEVMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKLGISPNVVTYNSII 288
                + E++ +   PDV  F  +IN LC  G  E +  L  KMEK G +P +VTYN+++
Sbjct: 232 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 291

Query: 289 HGLCQNGRLDDAFELKEKMKIEGV-----------------------------------K 348
           H  C+ GR   A EL + MK +GV                                    
Sbjct: 292 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 351

Query: 349 PSLITYSVLINGLTKLENFDKANHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIHEALKI 408
           P+ +TY+ LING +       A+ +LNEM+  G  PN V +N LIDG+   GN  EALK+
Sbjct: 352 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 411

Query: 409 RDMMISKNITPTSVTLYTLMQGFCKSNQIEQAENALQEILSQGLSINPVTCYSVIHWLCM 468
             MM +K +TP+ V+   L+ G CK+ + + A      +   G+ +  +T   +I  LC 
Sbjct: 412 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 471

Query: 469 KSRFHSGLRSTMLMLSKNFRPSDQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSPASTPT 528
                  +     M      P     + L+ G CK G+   A ++  R+   G   +   
Sbjct: 472 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 531

Query: 529 SNALIHGLCGAGYMKEAVRILKEMSKRGFSLDRITYNTLILGCCKKGKVEECFRLKEEMT 588
            + LI+  C  G +KEA+RI + M   G + D  T+N L+   CK GKV E       MT
Sbjct: 532 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 591

Query: 589 KHGIQPDIYTCNLLLHGLCNAGKLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYKANRME 648
             GI P+  + + L++G  N+G+   A  ++DE    G      TYG ++ G  K   + 
Sbjct: 592 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 651

Query: 649 DVEKLFNELVTKKIELNTIVYNILIRANCHSGNVVAALQLRDNMKSKGIFPTCASYSSLI 708
           + EK    L      ++T++YN L+ A C SGN+  A+ L   M  + I P   +Y+SLI
Sbjct: 652 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 711

Query: 709 HGMCKIGCDEDAKRLIDEMRDEG-LLPNVVCYTALIDGYCKLGKMDTAEATLREMISFNI 768
            G+C+ G    A     E    G +LPN V YT  +DG  K G+         +M +   
Sbjct: 712 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 771

Query: 769 RPNKFTYTVMIDGYCKLGNMDDAIKLLSKMKESGIVPDVVTYNALTNGFCKRKDMDKAFK 813
            P+  T   MIDGY ++G ++    LL +M      P++ TYN L +G+ KRKD+  +F 
Sbjct: 772 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 831

BLAST of Sed0011000 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 314.7 bits (805), Expect = 2.2e-85
Identity = 234/829 (28.23%), Postives = 404/829 (48.73%), Query Frame = 0

Query: 5   RFTINKTIPVLFPFSRRLACVLSTQPPKKPHQDQPWQLQVQLLNWVSSILSNSSLDSS-K 64
           +F+ + T+P   P +RR  C +S      P ++      + + + + SILS  +   S  
Sbjct: 26  KFSTDVTVP--SPVTRRQFCSVSPLLRNLPEEESD---SMSVPHRLLSILSKPNWHKSPS 85

Query: 65  CRAILPHLSPLEFDRLFFSVGLKSNPKTCLNFFYFASDSFTFGFTIRSYCILILLLVHS- 124
            ++++  +SP     LF    L  +PKT LNF ++ S +  +  ++ SY  L+ LL+++ 
Sbjct: 86  LKSMVSAISPSHVSSLF---SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNG 145

Query: 125 --KLLPPARLLLIRLIDG---KLPVLDSDSNV-----------LHIGIANALLGLTSVVG 184
              ++   RLL+I+  D     L VLD    +           L IG  N LL   +  G
Sbjct: 146 YVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFG 205

Query: 185 RF-EWTQAF-DLL-------IHVYSTQFRNF-GFGCAVDVFYVFSR---RGIFPSLKTCS 244
              E  Q + ++L       I+ Y+     +   G   +     S+    G+ P   T +
Sbjct: 206 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT 265

Query: 245 FLLSCLVKANELEKCCEVF-EVMSQGFRPDVFLFTNVINGLCKGGKMENAIELFMKMEKL 304
            L+    +  +L+   +VF E+  +G R +   +T++I+GLC   +++ A++LF+KM+  
Sbjct: 266 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 325

Query: 305 GISPNVVTYNSIIHGLCQNGRLDDAFELKEKMKIEGVKPSLITYSVLINGLTKLENFDKA 364
              P V TY  +I  LC + R  +A  L ++M+  G+KP++ TY+VLI+ L     F+KA
Sbjct: 326 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 385

Query: 365 NHVLNEMIDMGFVPNAVVYNTLIDGYCKMGNIHEALKIRDMMISKNITPTSVTLYTLMQG 424
             +L +M++ G +PN + YN LI+GYCK G I +A+ + ++M S+ ++P + T   L++G
Sbjct: 386 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 445

Query: 425 FCKSNQIEQAENALQEILSQGLSINPVTCYSVIHWLCMKSRFHSGLRSTMLMLSKNFRPS 484
           +CKSN + +A   L ++L + +  + VT  S+I   C    F S  R   LM  +   P 
Sbjct: 446 YCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 505

Query: 485 DQLLTILVCGLCKDGKQLEAVKLWFRLLEKGSPASTPTSNALIHGLCGAGYMKEAVRILK 544
               T ++  LCK  +  EA  L+  L +KG   +     ALI G C AG + EA  +L+
Sbjct: 506 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 565

Query: 545 EMSKRGFSLDRITYNTLILGCCKKGKVEECFRLKEEMTKHGIQPDIYTCNLLLHGLCNAG 604
           +M  +    + +T+N LI G C  GK++E   L+E+M K G+QP + T  +L+H L   G
Sbjct: 566 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 625

Query: 605 KLDDAIKLWDEFKGSGLVSNVHTYGVMMDGYYKANRMEDVEKLFNELVTKKIELNTIVYN 664
             D A   + +   SG   + HTY   +  Y +  R+ D E +  ++    +  +   Y+
Sbjct: 626 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 685

Query: 665 ILIRANCHSGNVVAALQLRDNMKSKGIFPTCASYSSLIHGMCKIGCDEDAKRLIDEM--R 724
            LI+     G    A  +   M+  G  P+  ++ SLI            K L++    +
Sbjct: 686 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI------------KHLLEMKYGK 745

Query: 725 DEGLLPNVVCYTALIDGYCKLGKMDTAEATLREMISFNIRPNKFTYTVMIDGYCKLGNMD 784
            +G  P +   + +++        DT    L +M+  ++ PN  +Y  +I G C++GN+ 
Sbjct: 746 QKGSEPELCAMSNMME-------FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 805

Query: 785 DAIKLLSKM-KESGIVPDVVTYNALTNGFCKRKDMDKAFKICDQMSTEG 799
            A K+   M +  GI P  + +NAL +  CK K  ++A K+ D M   G
Sbjct: 806 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6577115.10.0e+0086.13Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022931380.10.0e+0085.89pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucur... [more]
XP_023552294.10.0e+0085.77pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucur... [more]
XP_023542002.10.0e+0085.40pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucur... [more]
XP_022136653.10.0e+0085.56pentatricopeptide repeat-containing protein At4g19440, chloroplastic, partial [M... [more]
Match NameE-valueIdentityDescription
Q940A64.8e-21049.15Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... [more]
Q9FJE61.2e-9629.14Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
Q9LVQ53.8e-9029.48Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Q9LSL93.1e-8428.23Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... [more]
Q9FIT71.2e-8329.23Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1ETG90.0e+0085.89pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... [more]
A0A6J1C8540.0e+0085.56pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Momordic... [more]
A0A6J1FWH70.0e+0085.40pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... [more]
A0A6J1J2L60.0e+0085.16pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... [more]
A0A6J1ISC00.0e+0084.31LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chlo... [more]
Match NameE-valueIdentityDescription
AT4G19440.13.4e-21149.15Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G19440.23.4e-21149.15Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G59900.18.6e-9829.14Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G55840.12.7e-9129.48Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G65560.12.2e-8528.23Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 727..819
e-value: 2.3E-31
score: 110.6
coord: 218..326
e-value: 1.5E-36
score: 127.4
coord: 442..537
e-value: 4.8E-22
score: 80.2
coord: 327..441
e-value: 7.4E-28
score: 99.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 658..726
e-value: 2.1E-20
score: 75.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 538..657
e-value: 1.6E-33
score: 118.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 314..411
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 217..792
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 457..483
e-value: 0.75
score: 10.2
coord: 211..235
e-value: 0.22
score: 11.8
coord: 490..519
e-value: 4.0E-6
score: 26.7
coord: 595..623
e-value: 4.4E-5
score: 23.4
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 238..270
e-value: 1.1E-8
score: 34.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 279..312
e-value: 6.1E-10
score: 36.7
coord: 594..627
e-value: 2.4E-6
score: 25.4
coord: 384..417
e-value: 5.2E-4
score: 18.0
coord: 349..382
e-value: 5.6E-10
score: 36.8
coord: 524..558
e-value: 1.3E-9
score: 35.7
coord: 559..592
e-value: 2.6E-7
score: 28.4
coord: 245..278
e-value: 1.6E-7
score: 29.0
coord: 769..803
e-value: 2.3E-8
score: 31.7
coord: 314..348
e-value: 1.3E-8
score: 32.5
coord: 211..242
e-value: 5.5E-4
score: 17.9
coord: 629..663
e-value: 9.4E-6
score: 23.5
coord: 699..732
e-value: 4.1E-9
score: 34.1
coord: 665..698
e-value: 1.2E-7
score: 29.5
coord: 734..768
e-value: 1.7E-12
score: 44.7
coord: 492..522
e-value: 6.4E-7
score: 27.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 766..814
e-value: 2.1E-14
score: 53.4
coord: 696..745
e-value: 8.2E-17
score: 61.2
coord: 627..675
e-value: 1.8E-12
score: 47.2
coord: 523..570
e-value: 5.1E-17
score: 61.8
coord: 346..395
e-value: 4.4E-14
score: 52.4
coord: 276..324
e-value: 2.0E-18
score: 66.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..381
score: 13.318037
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 767..801
score: 11.925952
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 592..626
score: 10.55579
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 732..766
score: 14.677238
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..311
score: 14.27167
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 242..276
score: 12.660359
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 382..416
score: 9.108898
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 557..591
score: 11.947875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 627..661
score: 11.32308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 522..556
score: 13.67976
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 697..731
score: 12.693243
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 11.520384
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 662..696
score: 11.498462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 487..521
score: 11.114816
NoneNo IPR availablePANTHERPTHR47938:SF7REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 28..808
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 28..808

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0011000.1Sed0011000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding