
Lsi06G013860 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGTCCCTCACCGGATTTTGTTCTCCCTCTATTCTATCATCCCGTCGACGACGAGAACGAAACCAAAGAAGCAGAGAGCGCGCGAAGTGTGAGATTCAACGTTCAGGTTTAGCCATGGATTTTTGGAACAAAGCTCGAAGTTTCGCCGAGGAAGCAGCCAAGCGTTCGCAGGAGCTCACTCTTGAAGCTGCAAGGCGTTCCCAAGAGCTCACGATCGGATCTTCTAGATTGTCCGATATCGTTTCCGAGACTGCTAAACGCTCCAAGGAATTCGCTACTGAGGCCTCGAAGCGAGCTGATCAAATCAAAGCGGAAGCTGTTAAGCGAGCCGATCTTATCAAGCACTTGGTCGAGGGGACTCCGCCATCTGGCGTCCTTGAGAAGAACGCTTCCGACGAAGAGGCGCGGGAGGAGGATTTGGAGAGGTTTGGGATAAACGAAGAGCTGAGGGACTTCGTCAAAGGCATCACTATGAGTACATTTCGGGATTTTCCACTCGAAGGTAATTGATTCGTTTTCTTGAATTCTCCGTCCCCTTGGTTGGTTTGCTTGAAAGATTGTGGATCATAGAACTAGGTAAACAGGGGAAGTTCAAATTGATGTAGTCCGCGATTATCAAGCATTTAAGCTCTAGAAGTGAAGATTGTTAAGCTTAACTGAGTTGGCGAATATCGAAGGTTAATTCTCAATATAGGGAGCCATTGAATTTGAAGAACTACCTTAATTGGCACGAACCACCCCAATTTATTCATTTCCCGAAAACAGAATCCTTAAGCTCCTTGCATCCACGTACTTAAATTGAGTCTTTACAATATCGATCCTTGCCGTGTTCTGGAATATTCGTAATGTAATAAGTTGAAGTGTGTTTAACAGGTTTAATATGGAGCTTTATGGTCAGTACCATTGTAATTATCTGAAGATAATGGGGAAATGACCATTCCATTTGAATAGAGTAAGAAAACCATCCATTAATTAAGTGCATAGCCTTATTTAAGCTAATATAAGTTGGCTGTTTGGTTTGACACTAGTTTGTTTAGAAATTTGGTTAGTGGAAGTATGTGTGAAGCAGGAATTGATATTGTTTCTCCAGATTTTGGCAACTTCAACCCCATTAAAATCTCATGTTCATGAAATTATATGCACTAGAATAGAAATATTTTGCATTGTTTAACTTTTAAAACTAAGCATCTAATTGAGATGTTGTTATGACCCCTTCCGGATGTTTAACTGTTTCCCTCTTTTTTTTCTTTCTTTTTAACGGTGGTAAATATAATATGTTTATTTCCCTCTCCCACCAAGACCTTATTTCTAAAACTGGTTCATTTCTCTTTGTGTAGATGATTCACAAATGTCCAATATCCCCACAGTCTCAAATATTAGTCAGGATCTAACTGAGTGGCAGGCGAAGCATGCAAGTCTTGTTCTTTCAACTGTCAAGGTACTATTAGTAATAAACTTGGCACCAGTGAAGATGAATGTAGCTTTCTCTACCAACTTTAGAGGAACATTGGTTTTAAAGTTCATTTATATTGTATATAAACCAAGAGATGTGCTTACATGCCATGTTACAATGTATATGCTTTTAACCTTCATTTTAATTTAATGTGGCAGGAAATTTCTAAGTTACGTTATGAATTATGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGTTGGTGAACAGACATATTGCACCGTAAGTTTAAGTCTTGAGTTCGAGCCTCGACTCTGGCTTTAAACTTTGAATGTTGATTGCAAAAATCATCCAGCTTCTAGATTTGTATTGCTTGTCAATTGATTAGAAGGAAAGTTAATAATCCATACTTGCTATTGGATTGAAGACTTAAAAACTTAGAATTTTGAGTAAATAGTTACTTCCTTTTCTAGATTGGATGCTGGGGTGGGTACACTTAGGTTGTTGTTATAAACTTACCTGGACTAAGTGCAAAATGGGACTATTTTGATTACTGAGCAGTAAAGAATTTTTTTTATTCTTGCATATGTTCTACCGAGGCTTTATTTTTTATTGAGCACAGACCAAATGGTCATCGGAATAGCAGCTTCCATCTTTTTATCAGTTTCAAATCCGAATGTTTCATTCTCCATCTTTCTTTTCTTTTCTTTTCTTTTTTCTTTGGGGATGAATTCTCTGTCTAGTGAATTTTACCTGTAGTATTTTACTGATCCACTGCAGAAAAACCTTCTACATGAGTGTCTGTGAAATATTTCTTTGACAACTTATTTTAGTTTTGCCCGACCACTTTGCTTTACTGAATTCCATAATGAATAAGTTGATGATAAACGAACATGCAATGATGTCCTAATCTTCATGCCTTCATTTTCTTAAGGAATTTCATTAACGAAATGTCAAATTTTTCTTGTTCTATATTCTCTTACTTCTTCAGCTATGAGAAAAAGTACATGGAGGATGTCACGCTGAAATCAGATAAACAAGCTGAAGAGGGAAAGATGGAACCTGTTAAAGCAGAAATAACATCTACATCTCAGGAGAAGAAAAATGCTCCAACCTCCTCATCAAGTGACCAAGACTTGGACGTATTTCTTCTTGGAGATCTTGGAGACAGCGATGAAGGTCCAGGTATGGTGCCACAATTTATTGATGTCTGCTCTGTACGATTTCTAACAAAGAAAACAGGCCTCTAGAAAATCTTCAATGTTTAAACAAAGATCTGTTCCTCTGACTTTATTGATTTTGTCTATTCAAGATTGTTAATGATATTGATGACACTGTAACACATGAACTATGACAAATTGCTGTTGTCACGATGCTGTATTGGCATTTGGCATATATCTTTTTGAATCCTACTGAAGCTTTTTACGAGGCAGAACAGAAAACTGGTCGCATCTTTATCTAAAAGAAAAACACTATAAAATGTGATTGTTTTGCTTGAAAACAAGTGATTTGATGGAGCGGCTGTCATTTGTCACTTCCATGGCTTCAAACATTATTTGGTGCAATTATTAGCAATGTGCATAGCATATGCACAGTCCATTTATATGATTGCTGTTGATGTCGTTGAGGTTGGTGCCACTGATCTTCTTCCTGGTTTTTCAGATGATGGAGATGAGGCCTTTGATGATGATTTTGACAAAATGGTTGACACTTCGGTAAGTAGAATTTATCCTTTGCTTTACATCCCCATTTCCATGTTTGACTAATCTGTTGTGCTTAGGTCCCAACATTTTCATTGACGTCTCTTATGAATTTTATGTGGACATGATGCTGAGTTTTTGTGGTGAATTGGATTTAGGATCCCCTACTAGAGATTTCGACCATTGTGCGAATTTTGAGAAATGTTTTCTGA CGTCCCTCACCGGATTTTGTTCTCCCTCTATTCTATCATCCCGTCGACGACGAGAACGAAACCAAAGAAGCAGAGAGCGCGCGAAGTGTGAGATTCAACGTTCAGGTTTAGCCATGGATTTTTGGAACAAAGCTCGAAGTTTCGCCGAGGAAGCAGCCAAGCGTTCGCAGGAGCTCACTCTTGAAGCTGCAAGGCGTTCCCAAGAGCTCACGATCGGATCTTCTAGATTGTCCGATATCGTTTCCGAGACTGCTAAACGCTCCAAGGAATTCGCTACTGAGGCCTCGAAGCGAGCTGATCAAATCAAAGCGGAAGCTGTTAAGCGAGCCGATCTTATCAAGCACTTGGTCGAGGGGACTCCGCCATCTGGCGTCCTTGAGAAGAACGCTTCCGACGAAGAGGCGCGGGAGGAGGATTTGGAGAGGTTTGGGATAAACGAAGAGCTGAGGGACTTCGTCAAAGGCATCACTATGAGTACATTTCGGGATTTTCCACTCGAAGATGATTCACAAATGTCCAATATCCCCACAGTCTCAAATATTAGTCAGGATCTAACTGAGTGGCAGGCGAAGCATGCAAGTCTTGTTCTTTCAACTGTCAAGGAAATTTCTAAGTTACGTTATGAATTATGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGTTGGTGAACAGACATATTGCACCCTATGAGAAAAAGTACATGGAGGATGTCACGCTGAAATCAGATAAACAAGCTGAAGAGGGAAAGATGGAACCTGTTAAAGCAGAAATAACATCTACATCTCAGGAGAAGAAAAATGCTCCAACCTCCTCATCAAGTGACCAAGACTTGGACGTATTTCTTCTTGGAGATCTTGGAGACAGCGATGAAGGTCCAGCAATGTGCATAGCATATGCACAGTCCATTTATATGATTGCTGTTGATGTCGTTGAGGTTGGTGCCACTGATCTTCTTCCTGGTTTTTCAGATGATGGAGATGAGGCCTTTGATGATGATTTTGACAAAATGGTTGACACTTCGGATCCCCTACTAGAGATTTCGACCATTGTGCGAATTTTGAGAAATGTTTTCTGA ATGGATTTTTGGAACAAAGCTCGAAGTTTCGCCGAGGAAGCAGCCAAGCGTTCGCAGGAGCTCACTCTTGAAGCTGCAAGGCGTTCCCAAGAGCTCACGATCGGATCTTCTAGATTGTCCGATATCGTTTCCGAGACTGCTAAACGCTCCAAGGAATTCGCTACTGAGGCCTCGAAGCGAGCTGATCAAATCAAAGCGGAAGCTGTTAAGCGAGCCGATCTTATCAAGCACTTGGTCGAGGGGACTCCGCCATCTGGCGTCCTTGAGAAGAACGCTTCCGACGAAGAGGCGCGGGAGGAGGATTTGGAGAGGTTTGGGATAAACGAAGAGCTGAGGGACTTCGTCAAAGGCATCACTATGAGTACATTTCGGGATTTTCCACTCGAAGATGATTCACAAATGTCCAATATCCCCACAGTCTCAAATATTAGTCAGGATCTAACTGAGTGGCAGGCGAAGCATGCAAGTCTTGTTCTTTCAACTGTCAAGGAAATTTCTAAGTTACGTTATGAATTATGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGTTGGTGAACAGACATATTGCACCCTATGAGAAAAAGTACATGGAGGATGTCACGCTGAAATCAGATAAACAAGCTGAAGAGGGAAAGATGGAACCTGTTAAAGCAGAAATAACATCTACATCTCAGGAGAAGAAAAATGCTCCAACCTCCTCATCAAGTGACCAAGACTTGGACGTATTTCTTCTTGGAGATCTTGGAGACAGCGATGAAGGTCCAGCAATGTGCATAGCATATGCACAGTCCATTTATATGATTGCTGTTGATGTCGTTGAGGTTGGTGCCACTGATCTTCTTCCTGGTTTTTCAGATGATGGAGATGAGGCCTTTGATGATGATTTTGACAAAATGGTTGACACTTCGGATCCCCTACTAGAGATTTCGACCATTGTGCGAATTTTGAGAAATGTTTTCTGA MDFWNKARSFAEEAAKRSQELTLEAARRSQELTIGSSRLSDIVSETAKRSKEFATEASKRADQIKAEAVKRADLIKHLVEGTPPSGVLEKNASDEEAREEDLERFGINEELRDFVKGITMSTFRDFPLEDDSQMSNIPTVSNISQDLTEWQAKHASLVLSTVKEISKLRYELCPRIMKERKFWRIYFLLVNRHIAPYEKKYMEDVTLKSDKQAEEGKMEPVKAEITSTSQEKKNAPTSSSSDQDLDVFLLGDLGDSDEGPAMCIAYAQSIYMIAVDVVEVGATDLLPGFSDDGDEAFDDDFDKMVDTSDPLLEISTIVRILRNVF Homology
BLAST of Lsi06G013860 vs. ExPASy TrEMBL
Match: A0A5A7UWY1 (BSD domain-containing protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003240 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.8e-131 Identity = 264/313 (84.35%), Postives = 271/313 (86.58%), Query Frame = 0
BLAST of Lsi06G013860 vs. ExPASy TrEMBL
Match: A0A1S3BVY4 (uncharacterized protein LOC103494072 OS=Cucumis melo OX=3656 GN=LOC103494072 PE=4 SV=1) HSP 1 Score: 478.4 bits (1230), Expect = 2.4e-131 Identity = 263/310 (84.84%), Postives = 269/310 (86.77%), Query Frame = 0
BLAST of Lsi06G013860 vs. ExPASy TrEMBL
Match: A0A5D3BET4 (BSD domain-containing protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00140 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 3.4e-130 Identity = 261/309 (84.47%), Postives = 267/309 (86.41%), Query Frame = 0
BLAST of Lsi06G013860 vs. ExPASy TrEMBL
Match: A0A0A0LPE8 (BSD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015590 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.5e-128 Identity = 261/324 (80.56%), Postives = 267/324 (82.41%), Query Frame = 0
BLAST of Lsi06G013860 vs. ExPASy TrEMBL
Match: A0A6J1EJP3 (uncharacterized protein LOC111435105 OS=Cucurbita moschata OX=3662 GN=LOC111435105 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.8e-124 Identity = 257/335 (76.72%), Postives = 267/335 (79.70%), Query Frame = 0
BLAST of Lsi06G013860 vs. NCBI nr
Match: XP_038879849.1 (uncharacterized protein LOC120071581 isoform X2 [Benincasa hispida]) HSP 1 Score: 484.2 bits (1245), Expect = 8.9e-133 Identity = 264/309 (85.44%), Postives = 271/309 (87.70%), Query Frame = 0
BLAST of Lsi06G013860 vs. NCBI nr
Match: XP_038879848.1 (uncharacterized protein LOC120071581 isoform X1 [Benincasa hispida]) HSP 1 Score: 484.2 bits (1245), Expect = 8.9e-133 Identity = 264/309 (85.44%), Postives = 271/309 (87.70%), Query Frame = 0
BLAST of Lsi06G013860 vs. NCBI nr
Match: KAA0058019.1 (BSD domain-containing protein, putative isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 478.8 bits (1231), Expect = 3.7e-131 Identity = 264/313 (84.35%), Postives = 271/313 (86.58%), Query Frame = 0
BLAST of Lsi06G013860 vs. NCBI nr
Match: XP_008453319.1 (PREDICTED: uncharacterized protein LOC103494072 [Cucumis melo]) HSP 1 Score: 478.4 bits (1230), Expect = 4.9e-131 Identity = 263/310 (84.84%), Postives = 269/310 (86.77%), Query Frame = 0
BLAST of Lsi06G013860 vs. NCBI nr
Match: TYJ98242.1 (BSD domain-containing protein, putative isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 474.6 bits (1220), Expect = 7.1e-130 Identity = 261/309 (84.47%), Postives = 267/309 (86.41%), Query Frame = 0
BLAST of Lsi06G013860 vs. TAIR 10
Match: AT1G69030.1 (BSD domain-containing protein ) HSP 1 Score: 237.3 bits (604), Expect = 1.8e-62 Identity = 146/327 (44.65%), Postives = 206/327 (63.00%), Query Frame = 0
BLAST of Lsi06G013860 vs. TAIR 10
Match: AT1G26300.1 (BSD domain-containing protein ) HSP 1 Score: 225.7 bits (574), Expect = 5.3e-59 Identity = 140/323 (43.34%), Postives = 194/323 (60.06%), Query Frame = 0
BLAST of Lsi06G013860 vs. TAIR 10
Match: AT1G26300.2 (BSD domain-containing protein ) HSP 1 Score: 176.4 bits (446), Expect = 3.7e-44 Identity = 100/214 (46.73%), Postives = 143/214 (66.82%), Query Frame = 0
BLAST of Lsi06G013860 vs. TAIR 10
Match: AT3G24820.1 (BSD domain-containing protein ) HSP 1 Score: 98.2 bits (243), Expect = 1.3e-20 Identity = 59/182 (32.42%), Postives = 102/182 (56.04%), Query Frame = 0
BLAST of Lsi06G013860 vs. TAIR 10
Match: AT5G65910.1 (BSD domain-containing protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.8e-07 Identity = 60/228 (26.32%), Postives = 100/228 (43.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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