Lsi05G007660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G007660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	4-diphosphocytidyl-2C-methyl-D-erythritol synthase
Location	chr05: 10774756 .. 10782034 (+)
RNA-Seq Expression	Lsi05G007660
Synteny	Lsi05G007660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAATTGTATACCCTTGACTATTAATTTCCTGTATTTTCAATAAAGTTAGCAGTGAAAAGTGGAGGGCACTTTCCATTTTGCCCACTTGGTTTCTCAGTCAAGCGTGGAGAGAGATGGTAACTGTAAGCCATTTTCCTCGAGTGAACTGCATCTTCTCAGCTTCTTCTTCCAAGGAATTCCCAATCAAACAACGAACAGTTCCCGCTATAATTGGTCCATCGATTTCTCATTTCAGCCTCCAGTTTGCAGGTCAGTCCAAGCTTGTTTTTGTTTGTTGCGTTGTGTTTGGTTACTAGAAAAGTTGTTCATGTTTGGATTTTTAAGTGCATGTGAGTTGGGAGAAATTTTTGTTACTTTGTATTGGAAATGAACTGACAATTCGAAGGTAGTGAGTGGACATTGCTTCTGGTTTCTTGGCTATCCATTGAGCGTTTTCTGAAGCGATTTGGTAATATCTATTATTATGACGGATATTTTGATGTTCTGGATGATTTTTTCGTCTTTCCGTAGGTGTTCAGTGTAATTTTAGGCGAAATGAGAAATTTCTCAAGTCGGTGATCAAATGCAGAGCTGCTGAAGTTGGGGATGTAAGTTAGACATATTACCTGTTGCTAAATTGTACAGTACTTGTACTATTTTTCGTTCTTGTTCGTTCTATGCGCTTACATTTTCTCTTTTAACAATCTTCAGGTGTCTGAGTTTGTGAAAGAGAGAAGTGTTTCTGTCATTCTGTTGGCTGGAGGCAAGGGAAAAAGGATGGGTGTAAGTTTCTAATTGCTTACCATTCGAACTAAATAACATTTTTGTTTGTGAATTAGATAATGTGGGTTCCATCTCAAAACCAATTGACAATGGGAGGAGTATGTATCTTATTAAGATTGTGAAACATTGCGAGGTCTGTTTATTTTGTGATTCTCAACATGCCCCTCAAGATGGTACCTCTTTGGGTTCACCATTCTTGGATAAGATCTCAATTTTTGTTTTTGGACCAAATACCCATTTGGGCTTTATGAGTTATGATATCCTATTATAGATATTATATATCATAACATAGGATTCCATCTCAAAACGAATTGACAATAAAGAAGTGGCCATTAGCTTTAGTATCTTATTACAATTGTGAGGTCCCTTGATTTTTTCAATGTAGGGTCCTCAACATTGTGGACAATTATGAATACTTTGTTTTCTACTCGAAAACAAACAAACAACCTATTTTTTCTTCTTTTCGTAATTTTCCAGTTTAGTTAATCAGCATTCTGACTTCTATTAAACATGACTTATTATGTAATCGTTTGATTGCTTTCTTTCCTTGAACAAATGTTATAAATTTTAAGACATAACCTCTGTTTAGTGTGCTGTACTTTACTCTCTTGCTTGGTTGACCTTCTTTAGCATTTATTTAGGTTAGGTATAGCAGTCTCTTTACCTAATACTCTGATAGTTAGATTTATTCTTTTCCTCTCTGTTTATTGCTTGTGTATTTAAGAGGCTGAACCTCTTGTGTAATTAGATTTATTACTAATTACTCAAGCCTTGGTAATTAGTAATATTGGTGAAGAGCATTTACTCCTCTTCGGTGCTCCTTAAAACCGAACCATAAATACGATTAAATCATGGAGTTATTACTTTCTTCCCTTTATCCATTTAATCCCTGTGTTAGTCGTGTTCATTTGGTGCTACAGTTAGAACTGTTAGAATGCTGGATTTTGCTTCAAAAATTATTTCTTATTTTTAAAATATTTTGTTATCTCAGTGTAGTTATGTCTCAAAGCTCCGTATATTTTGGCTAATAGTGTATTCATGATGTGCATGCAAGAGATGTTTGGATCTTCTTCATTATCTTACTTCTACACATGCTAATTTCTTTTTATCTTTGTGCAATTAGGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCTATCGCCTTGTACAGGTAAAATATAAATTAAAATGTCTTTATTCAGTTTTCCACAATTCCCCGTGGACAGTTTTAGCTTGCATATTTCAATGGATTTGAAGAAGTTAGCTTTCCAATGATTTGTAGTATGTTGCTGGACTTGGTGTAGCATTTTTCTGTATGTCCGTATCAAGGAGGGTTCACATAACCATTTGGCATGAAAATTCCCTTTTTTGTGTTTAAACATTATGATTGTGAAAGTCTATTTGGTAGGCATCTGTATGCATCCAAAAATTATCAGATAGATTCCAATCAATATACTATAGGCTAGCATGCCACAATAAAATAAAATAAAAATGTATACAGTGTATCTGCCTTCTGCCTAGGATAAAATGTAAAGAGGTGTGCCTGGAGTATGAGTATTTGTATGAGGCTATAATTTTTACAATCATATATATGATTGGATCCAATGCTCATTTTATAGTTAATTATTATTAGCCCTGCTTTTTTGTGAAATACCAAATGGAAATACAATGAACGTGCATATTTATTTGCTGATATGGCTATCCTTCCATGGCTGAGCTGAATGGTGTTTGTAATCCCTGTTTAAAGCTTTAATGGGTCCCACCTTTAAAAAGAAGGCAACAACCCTCTCGATAAGTGCAATTTTGCTATTTTATGGAAGCCGGAAGGTATGGCTTAGAAGAAATAGAAGGTTCATTCATGATGTGGAGAAACGTTTAGAGGAGCGTAGGGTTTCTTTCATTATTTAAATGGAAGGTATCCTTTCCTATCATGGAAAAATAAAAAAGACAATGCAAAAGTTGCATTTGACAGTTTCTGATTTTGACATGATTCATACTTGATACTTGGTTCTTCTAAGGACAGTTATTCAGTGATGCTCTCCTTAGGCTTGATCGCTAGCTCCTGCAAACCTTTAGTTTATTATGACACAACTTCTGAAGCTTATAAGCAATTAAATGGTGACTTAGTGCAGCCTGTACACTTTCTCACGTCTGATCGAGGTTAAGGAAATCATTGTGGTTTGCGATCCTTCTTATCAGGATATTTTTGAAGGTTTTTTTCTGTTTTTTTAATCTCACTGACTACCTCCACTTTGTATTCTAGCTCATGCATTATTTTTTATCCTGCTTTTAGATGCCAAAGAGAAGATTGATATTCAAATCAAATTCACACTTCCAGGAAAGGAGAGACAAGATTCCGTGTACAGTGGCCTTCAGGTCAGGTGCACGCTCATAATGTTTTGTTTTTGTTTCATTTTGTTTTGTTTTCCTGTAGGTGATAATGAGCATAGTTTACTAACAAATGGAATTAGAAGGCATGCAGGCTCTCATAAAACAACCTAAGGATGTATCAAATGGCTCTCCAGTTTAGAGCAATGGAAGGAATACAAAATAGTAGCAGTTACATTAAGAACTGCACGTTACATTTTGATCATATAGATTCTTGATGTTTGATGTGATATCTCATTAGAGTTTCTGGAATGGATTGACTTTCTTTGATAATGTTGTGCCTCATGCTGTTTCCATTTTCTCCCATTATCTTATAATAGCATTTTGCTATCATTTCAATTTACAGGCAATTGATTTGAACTCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGCAGGAGATATTCAACAGGTTGTTTTCTCATTCTTATTAGTTGCCTGGATTGTCATTGTATATATTTTTGTTACTTGTTCTATATATCAAATTCATAATTTAATGATGAAAGATTTCTACCCTTTTGATGTGTGTGGCAAGAAATGAACAGAAGAAAGTTTCAGGAGGAATCAAGGGTGTGGAGTGTTAGATGATATAAGATTAAATTTGCCTTCACCCATTAGCTTAAGCTGTTGGGTCAATCGGCGATTTAAGATGGTATTAGAGCAGGTGGTCTAGGGAGGTTCTGTGTTCAAACCCTTGCAATGTTGTTTCCTCCCCAATTAATATTCATTTCCACTTGTTGGGTCTTCTTCATATTTCAAGCCTATTAGTGAGATGGAGTGTTAGATGATATAAGATTAAATTTGCCTTCACCCATTAGCTTAAGCTTTTGGGTCAATTGGCGATTTAATATGGAGAAAACTTTTGAATTCTACTCCTTTTGGATCTTCTTTTTTGAGTTCCTCCCATAAATTAACTTATTATCATTATTATTATTTTGGGGTGGGGGGATAACACATAAGGACATGATTTCCAATGCTGGTTGCTGCTTGGGAGGAATCTTACTTCAAAGAGTTCTATAATCACTCTCCTTCCATCATTGCTTCCAATTCTTTATAAAAGAAAATAATTGTTTTCTCAGTTTCTCAATATAAAAAATAACAATAATAATTAAAAAAAAAACTACTATTTGTGTTGCTAAAAAAAGTGGAATTGTCTAAAGTCTAATTCATTAAAAATAAAATGTCATTTGAAGTCATTTGGTTTAGTTGTATCAAATATTTGAGATGTAAACGTGAATATGAACATATTCAAATAAAGAAAATTTGGGATATGCAGTGCTTGACATACATAATTAGGAATATTGGAGTTGATGTCCAAGATATTACAATTTACAATTTTGGCAAATTTCATGTTTATGTTCTATTTTGTATGGTGAGAGATATACTTCAAAATTTACTGGACTTTTATTTCAACGCTTTCACTTAAAACTTGTTGATCATAACCTAGATTAGGCTCATTTAATTAGACTTTGATTCTTTCCTTCTAGGTTCTTAAAGATGCTAGGCTGAATGGGGCAGCTGTACTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGTATATGCTGGGACTTATTCTATCATTATCATTCCCCTTTGGATGCCTCTGGTTTCTTTTATTTTCTAGAAGTTGTTTAAGGCAGGTATGTTACATAAAAAACCATGGTCTATTCTTTATCTAATCCTTCCTGTGGTAATTGGATCTTTGGGGTGAGAGAAATAACAGTGTTTTTTTGATGTGTGAAGAGGGACCCTTGTGAGGTTTAGTCTTTGGTGAGGTTCCATGTTCCTCTTTAGGCTTCGGCTTCGAAGATTTTTTGTAATTACTCTTTAGGCAACATTTTAGTGAGTTAAACCCCTTTCCATAATGGGATTTTTGTGGGCTTAGGTTTTTTGTATGCCTTGTCTTTCATTTTTTTTCTCAATGAGAACAATAAAATCTTAGGACTATGAATTTTCTTGGCAACCAAATGTAGTTGGGTGTGGGTCAGACGATAGATTAGTTGAAGTGTGTGCAAGTTGGCTTGGATAGTCAAAAATATTTTTTTAAAGAAAATCAAACCAGTAATTTTTTAAGCCAAAATTTGAAACTATCCTTTTCATGTTTTCTTTGTTTCCAAATTTGATAGGTAATTTTAAGCCAAATGCGGCCTCCTAAGATACTCATTGAACTGATCGATTTGATTTTATTAGTTGCCAAGTTCTCTATTGCTTTGGCTGGACTTTTGAAATTGAAGAGAATTTGTAACTGAACTTGGTCGGTAAAATTTTTATCCATCTGCTTACCTTCTGGTTGGGTTTTTTCCTGGTAGATCCTCCTGTTACCCGGTACTTCCTCTCACGTATCTCCTCATTAATCCACGTCCTGTCAATTTTTCTTGCCTTTGTTTTTCTTTATCCCAGAGATGCCACCTCCTTCTTTTCTCTTCAGTCTTGGTACAGTTCAATCCCCTGGAGGGAAAAAAAGAAAAACCCACGCTCACACTTCTTTTCTACCATGTCCTCACGCTTAAAACTATTTTAAGGACTGCATTCATCCGTGCATATTTTCCTGGTCGTTCACTCCCATACTTAAATATTTTCATAGTTTCTTAAATCTACCATGCTCTCACCTTCAAATCCTTCCAAATTTGTTTATTTGTGTGTTTTTGGTGGGAACTCAATTATAGAAGCTTAAACACTCATGATACTACGTAGACGTCTCTCTGGCTCATACATCTCTCCTGGATGGTGCTCCCTCAGCAGAAATTATGCTGAAGCACAAAGCCACATCTTTCTCAATTTCTAGTGCGCTCAAAATTTTGGGACTTCACTTTTTGTACCTTTAATTGGATGGTGGTGCTCCCATGAACCTCAACCTTCTTCTTACGCATACATTAAGGGGACACCCCTTCACAAAAGTACCCATTCGATCCACTTTATTTCAGCATTCTTCTAGCCTTAGTGGCTTGAAAGGAACAATTGAATTTTTAGTGATAAAGACATACTCAATCTTAACTCTGATGGACAATTTGAGATTTTTTTGAGTCTGTCTCGTCTCTGGGTGTAAAATGTTCTTCCATTAAACGATTACTGTTTGAATTCTCAATTAACCAGTGGGAGGATTTTTCTTAAACATTCCTTGGGTATGGGGCCTGGCTCTCCTCCCTCTTTCTTTTGTAATTTCATTCTAATAAGGATAATTAATCTTTCCTTTAATTTATATGCCTTGCTGCATGGGCTTATATTAGATTTTAAGGGACATATCTCATTAGTGTAGGTCTCTTCGGGACTATTGATGATATAATAGCCTCTTAAAAGTGGTACTTAAAAAAAATCTCTTAATAAGTTATCTTGCTGCTATTTCCAATTGTCTACATTTTACATTGACAAAGCCTCTTGAGTTTGTATTATTTCCTTTTTTACGTTGTCACTTTGTTCGAGGAAAATTGTGCATTTAGAATTTTGTCTGTGCATTTAGAATTTTGTCATGCATATTCTTTATTCCAAAAAACTAGACTACTTTCAGCTATATCTATCTGATAGCTAGTCACGCTTTAGTAAATACCGATGTCATGCATATGCATCATATTGTGCACTTAGAATTTTGTCGTGGATATGCATCATTCATGTAATGTACATCGCGAGTACTTCAATTGTATAACAATCAATTACCTTCTTGGAACAATTCTCCAATTACTTTTCACTTTTCAGGCAAATGATGATCGTTTTGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACACCGCAGGTTTGCTGTAAATTTGAATATATGAAATGCAGCCTTTTGTGGAATCCGGTAGAATTTAACACAGGCAGATTAATTTAGCATTTCTATCGTTTTTTGCAGGTTATTGAGCCTGAGTTGCTTAAGAAAGGGTTTGAGCTTGTGAACAGGTATTTTTTATTCTTAGTTTATTTTCTCATGTTATCAATGAGGAAACACTGTAGCCACACTTTCTAGTACTTGACTAGTTGGGAGACATGGTAAAAGAGAGCTAATAACTATTTTTGAGGCTTCCTGATTCAAGGTTTGCAAAGTCAGGATGTAGCCAGATCGAATTGCTGGATCATTTAGCTGTGTTTGACTTTGCATGA

mRNA sequence

TGTAATTGTATACCCTTGACTATTAATTTCCTGTATTTTCAATAAAGTTAGCAGTGAAAAGTGGAGGGCACTTTCCATTTTGCCCACTTGGTTTCTCAGTCAAGCGTGGAGAGAGATGGTAACTGTAAGCCATTTTCCTCGAGTGAACTGCATCTTCTCAGCTTCTTCTTCCAAGGAATTCCCAATCAAACAACGAACAGTTCCCGCTATAATTGGTCCATCGATTTCTCATTTCAGCCTCCAGTTTGCAGGTGTTCAGTGTAATTTTAGGCGAAATGAGAAATTTCTCAAGTCGGTGATCAAATGCAGAGCTGCTGAAGTTGGGGATGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCTATCGCCTTGTACAGCCTGTACACTTTCTCACGTCTGATCGAGGTTAAGGAAATCATTGTGGTTTGCGATCCTTCTTATCAGGATATTTTTGAAGATGCCAAAGAGAAGATTGATATTCAAATCAAATTCACACTTCCAGGAAAGGAGAGACAAGATTCCGTGTACAGTGGCCTTCAGGCAATTGATTTGAACTCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGCAGGAGATATTCAACAGGTTCTTAAAGATGCTAGGCTGAATGGGGCAGCTGTACTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGCAAATGATGATCGTTTTGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACACCGCAGGTTATTGAGCCTGAGTTGCTTAAGAAAGGGTTTGAGCTTGTGAACAGGTTTGCAAAGTCAGGATGTAGCCAGATCGAATTGCTGGATCATTTAGCTGTGTTTGACTTTGCATGA

Coding sequence (CDS)

ATGGTAACTGTAAGCCATTTTCCTCGAGTGAACTGCATCTTCTCAGCTTCTTCTTCCAAGGAATTCCCAATCAAACAACGAACAGTTCCCGCTATAATTGGTCCATCGATTTCTCATTTCAGCCTCCAGTTTGCAGGTGTTCAGTGTAATTTTAGGCGAAATGAGAAATTTCTCAAGTCGGTGATCAAATGCAGAGCTGCTGAAGTTGGGGATGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCTATCGCCTTGTACAGCCTGTACACTTTCTCACGTCTGATCGAGGTTAAGGAAATCATTGTGGTTTGCGATCCTTCTTATCAGGATATTTTTGAAGATGCCAAAGAGAAGATTGATATTCAAATCAAATTCACACTTCCAGGAAAGGAGAGACAAGATTCCGTGTACAGTGGCCTTCAGGCAATTGATTTGAACTCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGCAGGAGATATTCAACAGGTTCTTAAAGATGCTAGGCTGAATGGGGCAGCTGTACTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGCAAATGATGATCGTTTTGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACACCGCAGGTTATTGAGCCTGAGTTGCTTAAGAAAGGGTTTGAGCTTGTGAACAGGTTTGCAAAGTCAGGATGTAGCCAGATCGAATTGCTGGATCATTTAGCTGTGTTTGACTTTGCATGA

Protein sequence

MVTVSHFPRVNCIFSASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLKSVIKCRAAEVGDASMPKQYLPLLGQPIALYSLYTFSRLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCIHDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTPQVIEPELLKKGFELVNRFAKSGCSQIELLDHLAVFDFA

Homology

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BLAST of Lsi05G007660 vs. ExPASy Swiss-Prot
Match: P69834 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISPD PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.4e-65
Identity = 120/175 (68.57%), Postives = 143/175 (81.71%), Query Frame = 0


Query: 73  SMPKQYLPLLGQPIALYSLYTFSRLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPG 132
           SMPKQY+PLLGQPIALYS +TFSR+ EVKEI+VVCDP ++DIFE+ +E ID+ ++F +PG
Sbjct: 95  SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPG 154

Query: 133 KERQDSVYSGLQAIDLNSELVCIHDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIK 192
           KERQDSVYSGLQ ID+NSELVCIHDSARPLV   D+++VLKD    GAAVLGVP KATIK
Sbjct: 155 KERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIK 214

Query: 193 EANDDRFVQRTLDRKTLWEMQTPQVIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           E N D  V +TLDRKTLWEMQTPQVI+PELLKKGFELV          + ++++L
Sbjct: 215 EVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYL 269

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BLAST of Lsi05G007660 vs. ExPASy Swiss-Prot
Match: Q5N8G1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISPD PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-61
Identity = 117/176 (66.48%), Postives = 144/176 (81.82%), Query Frame = 0


Query: 72  ASMPKQYLPLLGQPIALYSLYTFSRLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLP 131
           ASMPKQYLPLLG PIAL+SL TF +L EVKE++VVCDP Y+DIFE + E + I IKF LP
Sbjct: 90  ASMPKQYLPLLGLPIALHSLKTFCQLKEVKEVVVVCDPDYKDIFEGSIENVQIPIKFALP 149

Query: 132 GKERQDSVYSGLQAIDLNSELVCIHDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATI 191
           GKERQDSVY+GLQ ID +SELVC+HDSARPLV + D+++VL+DA ++GAAVLGVPVKATI
Sbjct: 150 GKERQDSVYNGLQEIDGDSELVCVHDSARPLVSSEDVKKVLEDAIVHGAAVLGVPVKATI 209

Query: 192 KEANDDRFVQRTLDRKTLWEMQTPQVIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           KEA+ + FV +TLDRKTLWEMQTPQV+ P LL+ GFELV R        + ++++L
Sbjct: 210 KEADSNSFVVKTLDRKTLWEMQTPQVMRPSLLRDGFELVKRDGLEVTDDVSIVEYL 265

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BLAST of Lsi05G007660 vs. ExPASy Swiss-Prot
Match: Q6MEE8 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=ispD PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-30
Identity = 73/175 (41.71%), Postives = 110/175 (62.86%), Query Frame = 0


Query: 74  MPKQYLPLLGQPIALYSLYTFSRLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGK 133
           +PKQYL +  +PIAL+S    + + E++++IVVC+P Y+ +F     K++  + F  PG 
Sbjct: 25  IPKQYLTIQEKPIALHSFEKLASMPEIEQMIVVCEPQYEQLF--TVYKLNKPLIFARPGL 84

Query: 134 ERQDSVYSGLQAIDLNSELVCIHDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKE 193
            RQDS+++G++ I   + LVCIHDSARP +    I+Q + +A   GAAVLGV VKATIK 
Sbjct: 85  RRQDSLWNGIKLI-AGNPLVCIHDSARPFIEIDRIRQTVAEAEKWGAAVLGVRVKATIKI 144

Query: 194 ANDDRFVQRTLDRKTLWEMQTPQVIEPELLKKGFELVNR---FAKSGCSQIELLD 246
             + +F+  T +R  LWEMQTPQ++  +LL  GF +  +         S +EL+D
Sbjct: 145 CEEKQFIVNTPNRAFLWEMQTPQIVRLKLLYDGFSVAQKNELTVSDDVSLVELID 196

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BLAST of Lsi05G007660 vs. ExPASy Swiss-Prot
Match: Q9Z7X5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia pneumoniae OX=83558 GN=ispD PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27
Identity = 72/176 (40.91%), Postives = 102/176 (57.95%), Query Frame = 0


Query: 72  ASMPKQYLPLLGQPIALYSLYTFSRLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLP 131
           + +PKQYLPL G P+ L+SL   S L ++ E+IVVCDPSYQ+ F+      +  + F +P
Sbjct: 19  SKIPKQYLPLNGTPLVLHSLKILSSLPQIAEVIVVCDPSYQETFQ------EYPVSFAIP 78

Query: 132 GKERQDSVYSGLQAIDLNSELVCIHDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATI 191
           G+ RQDSV+SGLQ +  +   V IHD ARP +   +I  +L+ A   GA  L  P+  TI
Sbjct: 79  GERRQDSVFSGLQQV--SYPWVIIHDGARPFIYPDEIHDLLETAEKIGATALASPIPYTI 138

Query: 192 KEANDDRFVQRTLDRKTLWEMQTPQVIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           K+ N      RTLDR  L  + TPQ I+ E+L++G  L          Q+ L+D +
Sbjct: 139 KQRNP----VRTLDRDNLAIIHTPQCIKTEILREGLALAKE------KQLTLVDDI 176

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BLAST of Lsi05G007660 vs. ExPASy Swiss-Prot
Match: Q8R7S6 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=ispD PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.3e-27
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 73  SMPKQYLPLLGQPIALYSLYTFSRLIEVKEIIVVCDPSYQDIF-EDAKEKI--DIQIKFT 132
           S+ K YL + G+P+  YS+  F  +  +KEIIVV  P   +   E+  EK   +   K  
Sbjct: 19  SLNKVYLSIAGKPVLYYSIKAFDEIEWIKEIIVVTSPEETEYCQENVLEKFYWNKPFKIV 78

Query: 133 LPGKERQDSVYSGLQAIDLNSELVCIHDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKA 192
             G+ERQ SVY+G+  +D + E+V IHD ARPLV    I + +K A L  AA +GVPVK 
Sbjct: 79  KGGEERQYSVYNGISVVDKDCEIVAIHDGARPLVTKEIIMEAIKAAYLYKAAAVGVPVKD 138

Query: 193 TIKEANDDRFVQRTLDRKTLWEMQTPQVIEPELLKK 226
           TIK A++D F+  T DR+ LW +QTPQV E EL+ K
Sbjct: 139 TIKVADEDNFILDTPDRRYLWAIQTPQVFEKELIVK 174

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BLAST of Lsi05G007660 vs. ExPASy TrEMBL
Match: A0A0A0L2R5 (4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucumis sativus OX=3659 GN=Csa_3G113320 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 209/271 (77.12%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFSASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLKS 60
           MV+V+HFP +N  F  SSSKEFP KQ T+P  I PSISHF+L F GVQ  FRRNEKFLKS
Sbjct: 1   MVSVTHFPPLNFCFPPSSSKEFPTKQSTLPPQISPSISHFTLHFPGVQYGFRRNEKFLKS 60

Query: 61  VIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFSR 120
           VIKCRAA+VGD                        ASMPKQYLPLLGQPIALYSLYTFSR
Sbjct: 61  VIKCRAAQVGDSSEIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR 120

Query: 121 LIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180
           +IEVKEIIVVCDPSYQDIFEDAKEKIDIQ+KFTLPGKERQDSVYSGLQAIDLNSELVCIH
Sbjct: 121 MIEVKEIIVVCDPSYQDIFEDAKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180

Query: 181 DSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTPQ 240
           DSARPLVLAGDIQQVLKD RLNGAAVLGVPVKATIKEANDDRFVQ+TLDRKTLWEMQTPQ
Sbjct: 181 DSARPLVLAGDIQQVLKDGRLNGAAVLGVPVKATIKEANDDRFVQKTLDRKTLWEMQTPQ 240

Query: 241 VIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           VIEPELL+KGFELVNR        + +++HL
Sbjct: 241 VIEPELLRKGFELVNREGLEVTDDVSIVEHL 271

[Close]

BLAST of Lsi05G007660 vs. ExPASy TrEMBL
Match: A0A6J1EP27 (4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucurbita moschata OX=3662 GN=LOC111436084 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.3e-108
Identity = 209/272 (76.84%), Postives = 226/272 (83.09%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFS-ASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLK 60
           M TVS+FPR+NC F+ +SSSKEFP KQRTVPA I PSISH SL FAGVQ NF+RNEKFLK
Sbjct: 1   MATVSNFPRLNCSFTFSSSSKEFPSKQRTVPAKIRPSISHSSLHFAGVQFNFKRNEKFLK 60

Query: 61  SVIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFS 120
           SVIKC AAEVGD                        ASMPKQYLPLLGQPIALYSLYTFS
Sbjct: 61  SVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFS 120

Query: 121 RLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCI 180
           R+IEVKEI+VVCDPSY+DIFED KEKIDIQ+KFTLPGKERQDSVYSGLQAID N+ELVCI
Sbjct: 121 RMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVCI 180

Query: 181 HDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTP 240
           HDSARPLVLAGDIQ+V KDARLNGAAVLGVPVKATIKEANDDR+VQRTLDRKTLWEMQTP
Sbjct: 181 HDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTP 240

Query: 241 QVIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           QVIEPELL+KGFELVNR        + +++HL
Sbjct: 241 QVIEPELLRKGFELVNRNGLEVTDDVSIVEHL 272

[Close]

BLAST of Lsi05G007660 vs. ExPASy TrEMBL
Match: A0A6J1JCD6 (4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucurbita maxima OX=3661 GN=LOC111483126 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.4e-107
Identity = 206/272 (75.74%), Postives = 224/272 (82.35%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFS-ASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLK 60
           M TVS+FPR+NC F+ +SSSKEFP KQRTVPAII PSISH SL FAGVQ NF RNEKF+K
Sbjct: 1   MATVSNFPRLNCSFTFSSSSKEFPSKQRTVPAIIRPSISHSSLHFAGVQFNFNRNEKFVK 60

Query: 61  SVIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFS 120
           SVIKC AAEVGD                        ASMPKQYLPLLGQPIALYSLYTFS
Sbjct: 61  SVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFS 120

Query: 121 RLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCI 180
           R+IEVKEI+VVCDPSY+DIFED KEKIDIQ+KFTLPGKERQDSVYSGLQAID N+ELVCI
Sbjct: 121 RMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVCI 180

Query: 181 HDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTP 240
           HDSARPLVL GDIQ+V KDARLNGAAVLGVPVKATIKEA+DDR+VQRTLDRKTLWEMQTP
Sbjct: 181 HDSARPLVLEGDIQKVFKDARLNGAAVLGVPVKATIKEADDDRYVQRTLDRKTLWEMQTP 240

Query: 241 QVIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           QVIEPELL+KGFELVN         + +++HL
Sbjct: 241 QVIEPELLRKGFELVNSNGLEVTDDVSIVEHL 272

[Close]

BLAST of Lsi05G007660 vs. ExPASy TrEMBL
Match: A0A5D3D4T8 (4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00700 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106
Identity = 204/271 (75.28%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFSASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLKS 60
           M TV+ FP +NC F +SSSK+FP KQ T+P  I PSISHF+L F GVQ +FR NEKFLKS
Sbjct: 1   MATVTRFPPLNCSFPSSSSKQFPTKQPTLPPKIPPSISHFTLHFPGVQYDFRGNEKFLKS 60

Query: 61  VIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFSR 120
           VIKC AA+VGD                        ASMPKQYLPLLGQPIALYSLYTFSR
Sbjct: 61  VIKCGAAQVGDGSGIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR 120

Query: 121 LIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180
           LIEVKEIIVVCDPSYQDIFED KEKIDIQ+KFTLPGKERQDSVYSGLQAIDLNSELVCIH
Sbjct: 121 LIEVKEIIVVCDPSYQDIFEDTKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180

Query: 181 DSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTPQ 240
           DSARPL+LAGDIQQVLKD RLNGAAVLGVPVKATIKEAN+DRFVQ+TLDRKTLWEMQTPQ
Sbjct: 181 DSARPLILAGDIQQVLKDGRLNGAAVLGVPVKATIKEANNDRFVQKTLDRKTLWEMQTPQ 240

Query: 241 VIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           VIEPELL+KGFELVNR        + +++HL
Sbjct: 241 VIEPELLRKGFELVNREGLEVTDDVSIVEHL 271

[Close]

BLAST of Lsi05G007660 vs. ExPASy TrEMBL
Match: A0A1S3BT78 (4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucumis melo OX=3656 GN=LOC103493283 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106
Identity = 204/271 (75.28%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFSASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLKS 60
           M TV+ FP +NC F +SSSK+FP KQ T+P  I PSISHF+L F GVQ +FR NEKFLKS
Sbjct: 1   MATVTRFPPLNCSFPSSSSKQFPTKQPTLPPKIPPSISHFTLHFPGVQYDFRGNEKFLKS 60

Query: 61  VIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFSR 120
           VIKC AA+VGD                        ASMPKQYLPLLGQPIALYSLYTFSR
Sbjct: 61  VIKCGAAQVGDGSGIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR 120

Query: 121 LIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180
           LIEVKEIIVVCDPSYQDIFED KEKIDIQ+KFTLPGKERQDSVYSGLQAIDLNSELVCIH
Sbjct: 121 LIEVKEIIVVCDPSYQDIFEDTKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180

Query: 181 DSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTPQ 240
           DSARPL+LAGDIQQVLKD RLNGAAVLGVPVKATIKEAN+DRFVQ+TLDRKTLWEMQTPQ
Sbjct: 181 DSARPLILAGDIQQVLKDGRLNGAAVLGVPVKATIKEANNDRFVQKTLDRKTLWEMQTPQ 240

Query: 241 VIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           VIEPELL+KGFELVNR        + +++HL
Sbjct: 241 VIEPELLRKGFELVNREGLEVTDDVSIVEHL 271

[Close]

BLAST of Lsi05G007660 vs. NCBI nr
Match: XP_038904555.1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic [Benincasa hispida])

HSP 1 Score: 415.2 bits (1066), Expect = 4.0e-112
Identity = 218/271 (80.44%), Postives = 227/271 (83.76%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFSASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLKS 60
           MVTVSHF RVNC F ASSSKEFPIK+R  PA IGPSISHF LQ AGVQ NFRRNEKFLKS
Sbjct: 1   MVTVSHFHRVNCSFPASSSKEFPIKRRKFPAKIGPSISHFRLQAAGVQYNFRRNEKFLKS 60

Query: 61  VIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFSR 120
           VIKC A EVGD                        ASMPKQYLPLLGQPIALYSLYTFSR
Sbjct: 61  VIKCSAGEVGDGPEFVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR 120

Query: 121 LIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180
           LIEVKEIIVVCDPSYQDIFEDAKEKID+QIKFTLPGKERQDSVYSGLQAIDL+SELVCIH
Sbjct: 121 LIEVKEIIVVCDPSYQDIFEDAKEKIDMQIKFTLPGKERQDSVYSGLQAIDLSSELVCIH 180

Query: 181 DSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTPQ 240
           DSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEAN+DRFVQRTLDRKTLWEMQTPQ
Sbjct: 181 DSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANNDRFVQRTLDRKTLWEMQTPQ 240

Query: 241 VIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           VIEPELLKKGFELVNR        + ++++L
Sbjct: 241 VIEPELLKKGFELVNREGLEVTDDVSIVEYL 271

[Close]

BLAST of Lsi05G007660 vs. NCBI nr
Match: KAG6577350.1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 406.4 bits (1043), Expect = 1.8e-109
Identity = 210/273 (76.92%), Postives = 227/273 (83.15%), Query Frame = 0


Query: 1   MVTVSHFPRVNC--IFSASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFL 60
           M TVS+FPR+NC   FS+SSSKEFP KQRT+PA I PSISHFSL FAGVQ NF+RNEKFL
Sbjct: 1   MATVSNFPRLNCSFTFSSSSSKEFPSKQRTIPAKIRPSISHFSLHFAGVQFNFKRNEKFL 60

Query: 61  KSVIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTF 120
           KSVIKC AAEVGD                        ASMPKQYLPLLGQPIALYSLYTF
Sbjct: 61  KSVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120

Query: 121 SRLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVC 180
           SR+IEVKEI+VVCDPSY+DIFED KEKIDIQ+KFTLPGKERQDSVYSGLQAID N+ELVC
Sbjct: 121 SRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVC 180

Query: 181 IHDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQT 240
           IHDSARPLVLAGDIQ+V KDARLNGAAVLGVPVKATIKEANDDR+VQRTLDRKTLWEMQT
Sbjct: 181 IHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQT 240

Query: 241 PQVIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           PQVIEPELL+KGFELVNR        + +++HL
Sbjct: 241 PQVIEPELLRKGFELVNRNGLEVTDDVSIVEHL 273

[Close]

BLAST of Lsi05G007660 vs. NCBI nr
Match: XP_004133739.1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 404.8 bits (1039), Expect = 5.4e-109
Identity = 209/271 (77.12%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFSASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLKS 60
           MV+V+HFP +N  F  SSSKEFP KQ T+P  I PSISHF+L F GVQ  FRRNEKFLKS
Sbjct: 1   MVSVTHFPPLNFCFPPSSSKEFPTKQSTLPPQISPSISHFTLHFPGVQYGFRRNEKFLKS 60

Query: 61  VIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFSR 120
           VIKCRAA+VGD                        ASMPKQYLPLLGQPIALYSLYTFSR
Sbjct: 61  VIKCRAAQVGDSSEIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR 120

Query: 121 LIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180
           +IEVKEIIVVCDPSYQDIFEDAKEKIDIQ+KFTLPGKERQDSVYSGLQAIDLNSELVCIH
Sbjct: 121 MIEVKEIIVVCDPSYQDIFEDAKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180

Query: 181 DSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTPQ 240
           DSARPLVLAGDIQQVLKD RLNGAAVLGVPVKATIKEANDDRFVQ+TLDRKTLWEMQTPQ
Sbjct: 181 DSARPLVLAGDIQQVLKDGRLNGAAVLGVPVKATIKEANDDRFVQKTLDRKTLWEMQTPQ 240

Query: 241 VIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           VIEPELL+KGFELVNR        + +++HL
Sbjct: 241 VIEPELLRKGFELVNREGLEVTDDVSIVEHL 271

[Close]

BLAST of Lsi05G007660 vs. NCBI nr
Match: KAE8650196.1 (hypothetical protein Csa_011209 [Cucumis sativus])

HSP 1 Score: 404.8 bits (1039), Expect = 5.4e-109
Identity = 209/271 (77.12%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFSASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLKS 60
           MV+V+HFP +N  F  SSSKEFP KQ T+P  I PSISHF+L F GVQ  FRRNEKFLKS
Sbjct: 18  MVSVTHFPPLNFCFPPSSSKEFPTKQSTLPPQISPSISHFTLHFPGVQYGFRRNEKFLKS 77

Query: 61  VIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFSR 120
           VIKCRAA+VGD                        ASMPKQYLPLLGQPIALYSLYTFSR
Sbjct: 78  VIKCRAAQVGDSSEIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR 137

Query: 121 LIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCIH 180
           +IEVKEIIVVCDPSYQDIFEDAKEKIDIQ+KFTLPGKERQDSVYSGLQAIDLNSELVCIH
Sbjct: 138 MIEVKEIIVVCDPSYQDIFEDAKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVCIH 197

Query: 181 DSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTPQ 240
           DSARPLVLAGDIQQVLKD RLNGAAVLGVPVKATIKEANDDRFVQ+TLDRKTLWEMQTPQ
Sbjct: 198 DSARPLVLAGDIQQVLKDGRLNGAAVLGVPVKATIKEANDDRFVQKTLDRKTLWEMQTPQ 257

Query: 241 VIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           VIEPELL+KGFELVNR        + +++HL
Sbjct: 258 VIEPELLRKGFELVNREGLEVTDDVSIVEHL 288

[Close]

BLAST of Lsi05G007660 vs. NCBI nr
Match: XP_022929549.1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 402.5 bits (1033), Expect = 2.7e-108
Identity = 209/272 (76.84%), Postives = 226/272 (83.09%), Query Frame = 0


Query: 1   MVTVSHFPRVNCIFS-ASSSKEFPIKQRTVPAIIGPSISHFSLQFAGVQCNFRRNEKFLK 60
           M TVS+FPR+NC F+ +SSSKEFP KQRTVPA I PSISH SL FAGVQ NF+RNEKFLK
Sbjct: 1   MATVSNFPRLNCSFTFSSSSKEFPSKQRTVPAKIRPSISHSSLHFAGVQFNFKRNEKFLK 60

Query: 61  SVIKCRAAEVGD------------------------ASMPKQYLPLLGQPIALYSLYTFS 120
           SVIKC AAEVGD                        ASMPKQYLPLLGQPIALYSLYTFS
Sbjct: 61  SVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFS 120

Query: 121 RLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPGKERQDSVYSGLQAIDLNSELVCI 180
           R+IEVKEI+VVCDPSY+DIFED KEKIDIQ+KFTLPGKERQDSVYSGLQAID N+ELVCI
Sbjct: 121 RMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVCI 180

Query: 181 HDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIKEANDDRFVQRTLDRKTLWEMQTP 240
           HDSARPLVLAGDIQ+V KDARLNGAAVLGVPVKATIKEANDDR+VQRTLDRKTLWEMQTP
Sbjct: 181 HDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTP 240

Query: 241 QVIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           QVIEPELL+KGFELVNR        + +++HL
Sbjct: 241 QVIEPELLRKGFELVNRNGLEVTDDVSIVEHL 272

[Close]

BLAST of Lsi05G007660 vs. TAIR 10
Match: AT2G02500.1 (Nucleotide-diphospho-sugar transferases superfamily protein )

HSP 1 Score: 248.4 bits (633), Expect = 6.0e-66
Identity = 120/175 (68.57%), Postives = 143/175 (81.71%), Query Frame = 0


Query: 73  SMPKQYLPLLGQPIALYSLYTFSRLIEVKEIIVVCDPSYQDIFEDAKEKIDIQIKFTLPG 132
           SMPKQY+PLLGQPIALYS +TFSR+ EVKEI+VVCDP ++DIFE+ +E ID+ ++F +PG
Sbjct: 95  SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPG 154

Query: 133 KERQDSVYSGLQAIDLNSELVCIHDSARPLVLAGDIQQVLKDARLNGAAVLGVPVKATIK 192
           KERQDSVYSGLQ ID+NSELVCIHDSARPLV   D+++VLKD    GAAVLGVP KATIK
Sbjct: 155 KERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIK 214

Query: 193 EANDDRFVQRTLDRKTLWEMQTPQVIEPELLKKGFELVNRFAKSGCSQIELLDHL 248
           E N D  V +TLDRKTLWEMQTPQVI+PELLKKGFELV          + ++++L
Sbjct: 215 EVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYL 269

The following BLAST results are available for this feature:

BLAST of Lsi05G007660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P69834	8.4e-65	68.57	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabi...	[more]
Q5N8G1	1.9e-61	66.48	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Oryza...	[more]
Q6MEE8	1.8e-30	41.71	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Protochlamydia amoeb...	[more]
Q9Z7X5	1.1e-27	40.91	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia pneumoniae...	[more]
Q8R7S6	5.3e-27	44.87	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Caldanaerobacter sub...	[more]

BLAST of Lsi05G007660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2R5	2.6e-109	77.12	4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucumis sativus OX=3659 GN...	[more]
A0A6J1EP27	1.3e-108	76.84	4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JCD6	5.4e-107	75.74	4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucurbita maxima OX=3661 G...	[more]
A0A5D3D4T8	1.2e-106	75.28	4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BT78	1.2e-106	75.28	4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Lsi05G007660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904555.1	4.0e-112	80.44	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic [Beninca...	[more]
KAG6577350.1	1.8e-109	76.92	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, partial...	[more]
XP_004133739.1	5.4e-109	77.12	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform ...	[more]
KAE8650196.1	5.4e-109	77.12	hypothetical protein Csa_011209 [Cucumis sativus]	[more]
XP_022929549.1	2.7e-108	76.84	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic [Cucurbi...	[more]

BLAST of Lsi05G007660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02500.1	6.0e-66	68.57	Nucleotide-diphospho-sugar transferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034683	Cytidylyltransferase IspD/TarI	PFAM	PF01128	IspD	coord: 72..245 e-value: 8.9E-34 score: 117.2
IPR034683	Cytidylyltransferase IspD/TarI	CDD	cd02516	CDP-ME_synthetase	coord: 72..228 e-value: 4.59288E-57 score: 179.642
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	coord: 66..252 e-value: 4.7E-51 score: 175.5
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 73..229
None	No IPR available	PANTHER	PTHR32125:SF4	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC	coord: 72..234
None	No IPR available	PANTHER	PTHR32125	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC	coord: 72..234
IPR018294	4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site	PROSITE	PS01295	ISPD	coord: 153..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G007660.1	Lsi05G007660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0008299	isoprenoid biosynthetic process
molecular_function	GO:0050518	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0070567	cytidylyltransferase activity