Lsi03G001820 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGATACCTATGATTTTCTTGGAGATGTTTGGCTCTGTCATTCTTTTGGAGGAAAATGCTACAATTACACTGCATTTGTATGTTCATAAACATTTATATCCTTCGTCGGACCTGTTTGGAAACATATACTTAGAAATAAGTTTTTAAATATTTGAAGAGTCAGAGCTCTAAATTTGCTCGAATTCTTGTTCTTAACTCTATAATATTTTATAGGAACCAGCACTAGACACATTGAAGGTAATAGAGACTTTTCTAGCAGCAAACACGGAAGAGATTGTCACATTAATTTTAGAAGATTATGTTCAATCTACCAATGGATTGACCAAGATATTCACCGACGCTGGGCTGAATAAATTCTGGTTTCCAATCACGAACATGCCAAAGAACGGCGACGACTGGCCTCGAGTCACCGACATGGTTGCTAATAACCAAAGGCTGCTTGTCTTCACATCAAATAGCACAAAGGAAGCAACAGAAGGAATAGCATACCAATGGAATTACATGGTTGAAAATCAGTGTAAGCTAAGCTAG ATGTTGGATACCTATGATTTTCTTGGAGATGTTTGGCTCTGTCATTCTTTTGGAGGAAAATGCTACAATTACACTGCATTTGAACCAGCACTAGACACATTGAAGGTAATAGAGACTTTTCTAGCAGCAAACACGGAAGAGATTGTCACATTAATTTTAGAAGATTATGTTCAATCTACCAATGGATTGACCAAGATATTCACCGACGCTGGGCTGAATAAATTCTGGTTTCCAATCACGAACATGCCAAAGAACGGCGACGACTGGCCTCGAGTCACCGACATGGTTGCTAATAACCAAAGGCTGCTTGTCTTCACATCAAATAGCACAAAGGAAGCAACAGAAGGAATAGCATACCAATGGAATTACATGGTTGAAAATCAGTGTAAGCTAAGCTAG ATGTTGGATACCTATGATTTTCTTGGAGATGTTTGGCTCTGTCATTCTTTTGGAGGAAAATGCTACAATTACACTGCATTTGAACCAGCACTAGACACATTGAAGGTAATAGAGACTTTTCTAGCAGCAAACACGGAAGAGATTGTCACATTAATTTTAGAAGATTATGTTCAATCTACCAATGGATTGACCAAGATATTCACCGACGCTGGGCTGAATAAATTCTGGTTTCCAATCACGAACATGCCAAAGAACGGCGACGACTGGCCTCGAGTCACCGACATGGTTGCTAATAACCAAAGGCTGCTTGTCTTCACATCAAATAGCACAAAGGAAGCAACAGAAGGAATAGCATACCAATGGAATTACATGGTTGAAAATCAGTGTAAGCTAAGCTAG MLDTYDFLGDVWLCHSFGGKCYNYTAFEPALDTLKVIETFLAANTEEIVTLILEDYVQSTNGLTKIFTDAGLNKFWFPITNMPKNGDDWPRVTDMVANNQRLLVFTSNSTKEATEGIAYQWNYMVENQCKLS Homology
BLAST of Lsi03G001820 vs. ExPASy Swiss-Prot
Match: Q93XX5 (PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana OX=3702 GN=At5g67130 PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.1e-44 Identity = 76/128 (59.38%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Lsi03G001820 vs. ExPASy TrEMBL
Match: A0A6J1JJ27 (PI-PLC X domain-containing protein At5g67130 OS=Cucurbita maxima OX=3661 GN=LOC111487395 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63 Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. ExPASy TrEMBL
Match: A0A5A7TBL4 (PI-PLC X domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002330 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63 Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. ExPASy TrEMBL
Match: A0A1S3C9K6 (PI-PLC X domain-containing protein At5g67130 OS=Cucumis melo OX=3656 GN=LOC103498544 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63 Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. ExPASy TrEMBL
Match: A0A6J1GPE3 (PI-PLC X domain-containing protein At5g67130 OS=Cucurbita moschata OX=3662 GN=LOC111456311 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.3e-63 Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. ExPASy TrEMBL
Match: A0A0A0KSH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640590 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 4.3e-63 Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. NCBI nr
Match: XP_038890951.1 (PI-PLC X domain-containing protein At5g67130 [Benincasa hispida]) HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65 Identity = 121/128 (94.53%), Postives = 123/128 (96.09%), Query Frame = 0
BLAST of Lsi03G001820 vs. NCBI nr
Match: XP_022990547.1 (PI-PLC X domain-containing protein At5g67130 [Cucurbita maxima]) HSP 1 Score: 252.3 bits (643), Expect = 2.3e-63 Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. NCBI nr
Match: KAA0039426.1 (PI-PLC X domain-containing protein [Cucumis melo var. makuwa] >TYK00614.1 PI-PLC X domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63 Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. NCBI nr
Match: XP_008459396.1 (PREDICTED: PI-PLC X domain-containing protein At5g67130 [Cucumis melo]) HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63 Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. NCBI nr
Match: XP_022953911.1 (PI-PLC X domain-containing protein At5g67130 [Cucurbita moschata]) HSP 1 Score: 250.8 bits (639), Expect = 6.7e-63 Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Lsi03G001820 vs. TAIR 10
Match: AT1G13680.1 (PLC-like phosphodiesterases superfamily protein ) HSP 1 Score: 196.4 bits (498), Expect = 1.4e-50 Identity = 89/128 (69.53%), Postives = 101/128 (78.91%), Query Frame = 0
BLAST of Lsi03G001820 vs. TAIR 10
Match: AT1G49740.1 (PLC-like phosphodiesterases superfamily protein ) HSP 1 Score: 194.1 bits (492), Expect = 7.0e-50 Identity = 86/128 (67.19%), Postives = 103/128 (80.47%), Query Frame = 0
BLAST of Lsi03G001820 vs. TAIR 10
Match: AT3G19310.1 (PLC-like phosphodiesterases superfamily protein ) HSP 1 Score: 187.6 bits (475), Expect = 6.5e-48 Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 0
BLAST of Lsi03G001820 vs. TAIR 10
Match: AT4G36945.1 (PLC-like phosphodiesterases superfamily protein ) HSP 1 Score: 186.8 bits (473), Expect = 1.1e-47 Identity = 84/128 (65.62%), Postives = 101/128 (78.91%), Query Frame = 0
BLAST of Lsi03G001820 vs. TAIR 10
Match: AT5G67130.1 (PLC-like phosphodiesterases superfamily protein ) HSP 1 Score: 180.6 bits (457), Expect = 8.0e-46 Identity = 76/128 (59.38%), Postives = 100/128 (78.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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