Lsi02G024000 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G024000
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Adenine nucleotide alpha hydrolases-like superfamily protein
Location	chr02: 30659275 .. 30661158 (+)
RNA-Seq Expression	Lsi02G024000
Synteny	Lsi02G024000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTTTTTCTGTCACGGTGGCAGCCACGCCACGTGGGTAGAGGTGTCAAAGTATTTGGGTGACATGTAAGAGGCTCTTCTGTTTTTATGGCTGACAACTGCTGACAAGGCCTGCCACGTAGACAACAGTCTCGCCTCCAGAAAACCAAGAAAAAGAAAAAGAAAGCCGTGGTCTTCTTCTTCTTCTTATTTCCCAATTAAAACCGCTTCACAGGGGAATCGCTCCAATGGCGGCGACGGAGAAGCCAGTGATGGTGATTGGAATCGATGACAGCGAATACGCAATCGGCGCTCTGGAGTGGACATTGGACCATTTCTTCTCTTCAACCATAAATCCTCCTCCCTTCCACCTCATCCTCCTCCACGCCAAGCCGATTCCCCAAGTCTTCGTGGATGTCGCCGGTCCGGGAAGTAAGATCGATCGATCGAGATCATCCTCTTCAATCTCTGCTAATTAATTACTTAATTTCTAGTTTCAGCCAAAAATCGACGATCTATTATTGTTTTGAAATTATAATCAGTGGTATTTGGATCTGCTCCTGGAATGTACCAAATTTTGGACCAGCATTTGAAGAATACAGCGGGCAGAATCATGGAGAAAGCGAGAGAGATCTGTGCCGCTAAATCGGTAAAACACAAACAAAAGAATTGCGTTGGGTTAATTGAATTGCAGTGCAGGTAATTGATTAATAGGGTGAAATTGCAGGTTTATGATGTTGAATTTGTGGTTGAAGAAGGAGATGCTAGGTATGTACTATGCGACGCGGTTAATAAACACAGAGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCCATTAAAAGGTACTTTACCATTAAAATAATGTTTTTCAAAAAAATCATTTTTATTTAAACTATATTAAGGATTTCAATAATTGTTTTGAGTGTTTGACAAATATTTTAATTTTTTTTCAAAAATGTTTTTTTTTTGTCTATTAATTAACTTAAAAGATACAAAGAATCATAATTAATTAAATTTTACTACATTTCTTCGTAATTAAAATTAGATTTAAATTTTCATTTATAATTATTTTAAATTAATTAATATAAATTCATGTCAATAACGAAAAGTGACTTTTAATAAAATATATATATATATATATATTATATATATATATATATATTGAAATTAGGACCAAATAAAAATAGAACTTCTAAACATCTTGAAATCAAATGAAAATTAGGGTTGTTTGAGCCAAATTTTTAACCAATAGAAATTTTTCACAAAAATTAATAAATAAACCTCGAAGATAAAAGATTTCACTTGGGTTCATTGTTATGTCGCACAATTACACAGTTACATTATTCCTCTACTAAAACAATTTTGGGCGAAATTGCAAAAAGAAAAATAATTGTTTTTGTTTTTAAATAATTTGTTAAAATTATGGGTGAAACCAGAAATCTTTCTCGGAGCAGCAAAAACTTTACATTTTAATATTTTCTAATTTATATGCACAAATTTAAAGGGGAAAATTAGCAAAAAGCTCATCTTTTTATTTTTTTAAAAAAAATTAAATTACAAATTTAGTTCTCAAACTTTTAAATTTATGTCAAATAGGTCAGACTGTATTAATAAGGTCATATTGTTAACAGATTAACACATTAATATGTCGTATGCTCACTTTAGGCTTAATTTTGTAATTTAAACTTTTAATTTTTCTCAATTTAAGACAAAGTATGATTTTGTGCAGGGCGTTCTTAGGGAGTGTGAGTGACTATTGCGCTCACCATGCTCTATGCACGGTCACAATTGTGAAGCCTAAACCCAACACTTGAATTAAAAAATAATTAAAATAATAAGATAAAACAGTTAAGTTGCTTCTTAATATAAATAAAATAAAATAAATTCATATTTC

mRNA sequence

ATGGAAATCTCGCCTCCAGAAAACCAAGAAAAAGAAAAAGAAAGCCGTGGTCTTCTTCTTCTTCTTATTTCCCAATTAAAACCGCTTCACAGGGGAATCGCTCCAATGGCGGCGACGGAGAAGCCAGTGATGGTGATTGGAATCGATGACAGCGAATACGCAATCGGCGCTCTGGAGTGGACATTGGACCATTTCTTCTCTTCAACCATAAATCCTCCTCCCTTCCACCTCATCCTCCTCCACGCCAAGCCGATTCCCCAAGTCTTCGTGGATGTCGCCGGTCCGGGAATGGTATTTGGATCTGCTCCTGGAATGTACCAAATTTTGGACCAGCATTTGAAGAATACAGCGGGCAGAATCATGGAGAAAGCGAGAGAGATCTGTGCCGCTAAATCGGTTTATGATGTTGAATTTGTGGTTGAAGAAGGAGATGCTAGGTATGTACTATGCGACGCGGTTAATAAACACAGAGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCCATTAAAAGGGCGTTCTTAGGGAGTGTGAGTGACTATTGCGCTCACCATGCTCTATGCACGGTCACAATTGTGAAGCCTAAACCCAACACTTGAATTAAAAAATAATTAAAATAATAAGATAAAACAGTTAAGTTGCTTCTTAATATAAATAAAATAAAATAAATTCATATTTC

Coding sequence (CDS)

ATGGAAATCTCGCCTCCAGAAAACCAAGAAAAAGAAAAAGAAAGCCGTGGTCTTCTTCTTCTTCTTATTTCCCAATTAAAACCGCTTCACAGGGGAATCGCTCCAATGGCGGCGACGGAGAAGCCAGTGATGGTGATTGGAATCGATGACAGCGAATACGCAATCGGCGCTCTGGAGTGGACATTGGACCATTTCTTCTCTTCAACCATAAATCCTCCTCCCTTCCACCTCATCCTCCTCCACGCCAAGCCGATTCCCCAAGTCTTCGTGGATGTCGCCGGTCCGGGAATGGTATTTGGATCTGCTCCTGGAATGTACCAAATTTTGGACCAGCATTTGAAGAATACAGCGGGCAGAATCATGGAGAAAGCGAGAGAGATCTGTGCCGCTAAATCGGTTTATGATGTTGAATTTGTGGTTGAAGAAGGAGATGCTAGGTATGTACTATGCGACGCGGTTAATAAACACAGAGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCCATTAAAAGGGCGTTCTTAGGGAGTGTGAGTGACTATTGCGCTCACCATGCTCTATGCACGGTCACAATTGTGAAGCCTAAACCCAACACTTGA

Protein sequence

MEISPPENQEKEKESRGLLLLLISQLKPLHRGIAPMAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGPGMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT

Homology

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BLAST of Lsi02G024000 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.2e-11
Identity = 52/184 (28.26%), Postives = 85/184 (46.20%), Query Frame = 0


Query: 30  HRGIAPMAATEKPV------MVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAK 89
           H    P AAT  P       + + +D SE +  A+ W +DH+       P   +++LH  
Sbjct: 27  HSSSTPSAATPTPTAGARRKIGVAVDLSEESAFAVRWAVDHYIR-----PGDAVVILHVS 86

Query: 90  PIPQVFVDVAGPGMV-------FGSAPGMYQILDQHLKN--TAGRIMEKAREICAAKSVY 149
           P   +F    GP  +         + PG      Q   +  T+ ++ + A+ +  A   +
Sbjct: 87  PTSVLFGADWGPLPLQTPPPPSAATDPGAQPKPSQEDFDAFTSSKVADLAKPLKEAGFPH 146

Query: 150 DVEFVVEEGDARYVLCDAVNKHRASMLVVGSHGYGAIKRAF---LGSVSDYCAHHALCTV 196
            +  +V++ D R  LC    +   S +++GS G+GA KR     LGSVSDYC HH +C V
Sbjct: 147 KIH-IVKDHDMRERLCLETERLNLSAVIMGSRGFGAEKRGSDGKLGSVSDYCVHHCVCPV 204

[Close]

BLAST of Lsi02G024000 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 47/164 (28.66%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 46  IGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGPGMVFGSAPGM 105
           + +D SE +  A+ W +DH+       P   ++LLH  P   +F      G  +G  P  
Sbjct: 52  VAVDLSEESSFAVRWAVDHYIR-----PGDAVVLLHVSPTSVLF------GADWGPLPLK 111

Query: 106 YQILDQHLKN----------TAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNK 165
            QI D + +           T+ ++ + A+ +      Y +  +V++ D R  LC  + +
Sbjct: 112 TQIEDPNAQPQPSQEDFDAFTSTKVADLAKPLKELGFPYKIH-IVKDHDMRERLCLEIER 171

Query: 166 HRASMLVVGSHGYGAIKR----AFLGSVSDYCAHHALCTVTIVK 196
              S +++GS G+GA K+      LGSVSDYC HH +C V +V+
Sbjct: 172 LGLSAVIMGSRGFGAEKKRGSDGKLGSVSDYCVHHCVCPVVVVR 203

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BLAST of Lsi02G024000 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09
Identity = 44/140 (31.43%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 57  ALEWTLDHFFSSTINPPPFHLILLHAKPIPQ-VFVDVAGPGMVFGSAPGMYQILDQHLKN 116
           A EWTL+    S  N   F ++LLH + + +  F DV        ++P  ++ + Q  K 
Sbjct: 30  AFEWTLEKIVRS--NTSDFKILLLHVQVVDEDGFDDVDS----IYASPEDFRDMRQSNKA 89

Query: 117 TAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNKHRASMLVVGSHGYGAIKRAF 176
               ++E     C    V   E  ++ GD + V+C  V + R   LVVGS G G  ++ F
Sbjct: 90  KGLHLLEFFVNKCHEIGV-GCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVF 149

Query: 177 LGSVSDYCAHHALCTVTIVK 196
           +G+VS +C  HA C V  +K
Sbjct: 150 VGTVSAFCVKHAECPVMTIK 162

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BLAST of Lsi02G024000 vs. ExPASy Swiss-Prot
Match: P9WFD0 (Universal stress protein MT2085 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2085 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.1e-06
Identity = 42/162 (25.93%), Postives = 69/162 (42.59%), Query Frame = 0


Query: 37  AATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGPG 96
           AAT K  +++G+D S  +  A+ W                      + +P   + +  P 
Sbjct: 3   AATAKYGILVGVDGSAQSNAAVAWAAREAV---------------MRQLPITLLHIVAPV 62

Query: 97  MVFGSAPGMYQILDQHLKNTAGRIMEKAREI----CAAKSVYDVEFVVEEGDARYVLCDA 156
           +V      +Y  + +  K+ A +++E+ARE             V   +   +    L DA
Sbjct: 63  VVGWPVGQLYANMTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDA 122

Query: 157 VNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIV 195
               +A ++VVGS G GA+ R  LGS+S    HHA C V I+
Sbjct: 123 --SQQAWLMVVGSQGMGALGRLLLGSISTALLHHARCPVAII 147

[Close]

BLAST of Lsi02G024000 vs. ExPASy Swiss-Prot
Match: P9WFD1 (Universal stress protein Rv2026c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2026c PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.1e-06
Identity = 42/162 (25.93%), Postives = 69/162 (42.59%), Query Frame = 0


Query: 37  AATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGPG 96
           AAT K  +++G+D S  +  A+ W                      + +P   + +  P 
Sbjct: 3   AATAKYGILVGVDGSAQSNAAVAWAAREAV---------------MRQLPITLLHIVAPV 62

Query: 97  MVFGSAPGMYQILDQHLKNTAGRIMEKAREI----CAAKSVYDVEFVVEEGDARYVLCDA 156
           +V      +Y  + +  K+ A +++E+ARE             V   +   +    L DA
Sbjct: 63  VVGWPVGQLYANMTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDA 122

Query: 157 VNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIV 195
               +A ++VVGS G GA+ R  LGS+S    HHA C V I+
Sbjct: 123 --SQQAWLMVVGSQGMGALGRLLLGSISTALLHHARCPVAII 147

[Close]

BLAST of Lsi02G024000 vs. ExPASy TrEMBL
Match: A0A0A0K632 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G397020 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-72
Identity = 132/164 (80.49%), Postives = 151/164 (92.07%), Query Frame = 0


Query: 37  AATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGPG 96
           A T+KPVM+IGIDDSEYAIGALEWTL+HFFSSTINPP F LILLHAKPIP++++D++GPG
Sbjct: 4   ATTKKPVMLIGIDDSEYAIGALEWTLNHFFSSTINPPLFKLILLHAKPIPEIYLDISGPG 63

Query: 97  MVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNKH 156
           M  GSAPG+YQ+LDQ+LK  AGRIMEKA+EICA++SV +VEFVVEEGDAR VLC+ VNK+
Sbjct: 64  MFMGSAPGLYQVLDQNLKKKAGRIMEKAKEICASRSVRNVEFVVEEGDARNVLCEGVNKY 123

Query: 157 RASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT 201
            ASMLVVGSHGYGAIKRA LGSVSDYCAHHA CT+TIVKPKPNT
Sbjct: 124 GASMLVVGSHGYGAIKRALLGSVSDYCAHHAQCTITIVKPKPNT 167

[Close]

BLAST of Lsi02G024000 vs. ExPASy TrEMBL
Match: A0A1S3BRS4 (universal stress protein A-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492818 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.1e-69
Identity = 128/168 (76.19%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 33  IAPMAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDV 92
           +A    T+KPVM+IGID+SEYAIGALEWTL+HFFSSTINPP F LILLHAKPIP++++D+
Sbjct: 1   MAATTTTKKPVMLIGIDESEYAIGALEWTLNHFFSSTINPPLFKLILLHAKPIPEIYLDI 60

Query: 93  AGPGMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDA 152
           +GPG   GSAPG+YQ+LDQ+LK  AG IM+KA+EICA +SV DVEFVVEEGDAR VLC+ 
Sbjct: 61  SGPGTFLGSAPGLYQVLDQNLKKKAGNIMKKAKEICATRSVCDVEFVVEEGDARNVLCEG 120

Query: 153 VNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT 201
           VNK+ ASMLVVGSHGYGAIKRA LGSVSDYCAHHA CTV IVKPKP+T
Sbjct: 121 VNKYGASMLVVGSHGYGAIKRALLGSVSDYCAHHAQCTVIIVKPKPHT 168

[Close]

BLAST of Lsi02G024000 vs. ExPASy TrEMBL
Match: A0A6J1JSC9 (universal stress protein PHOS34-like OS=Cucurbita maxima OX=3661 GN=LOC111487963 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 6.0e-69
Identity = 134/165 (81.21%), Postives = 146/165 (88.48%), Query Frame = 0


Query: 36  MAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGP 95
           MAATEKPVMVIGIDDSEYAI ALEWTLDH FSSTI PPPF +I++HAKPIP+ FV VAGP
Sbjct: 1   MAATEKPVMVIGIDDSEYAIAALEWTLDH-FSSTIYPPPFKIIVVHAKPIPETFVGVAGP 60

Query: 96  GMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNK 155
           GMVFGS PG+YQ+LDQ+LK  A RI+EKAREICAAKSV +V+F VEEGDARYVLC AV+K
Sbjct: 61  GMVFGSEPGLYQVLDQNLKRKAARIIEKAREICAAKSVSEVKFEVEEGDARYVLCKAVSK 120

Query: 156 HRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT 201
           H ASMLVVGSHGYGAIKRA LGSVSDYCAH+A CTVTIVK K  T
Sbjct: 121 HNASMLVVGSHGYGAIKRALLGSVSDYCAHNAPCTVTIVKLKTGT 164

[Close]

BLAST of Lsi02G024000 vs. ExPASy TrEMBL
Match: A0A6J1GNW2 (universal stress protein PHOS34-like OS=Cucurbita moschata OX=3662 GN=LOC111456172 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 132/162 (81.48%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 36  MAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGP 95
           MAATEKPVMVIGIDDSEYAI ALEWTLDH FSS I PPPF +I++HAKPIP+ FV VAGP
Sbjct: 1   MAATEKPVMVIGIDDSEYAIAALEWTLDH-FSSAIYPPPFKIIVVHAKPIPETFVGVAGP 60

Query: 96  GMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNK 155
           GMVFGS PG+YQ+LDQ+LK  A RI+EKAREICAAKSV +V+F VEEGDARYVLC AV++
Sbjct: 61  GMVFGSEPGLYQVLDQNLKRKAARIIEKAREICAAKSVSEVKFEVEEGDARYVLCKAVSE 120

Query: 156 HRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPK 198
           H ASMLVVGSHGYGAIKRA LGSVSDYCAH+A CTVTIVKPK
Sbjct: 121 HNASMLVVGSHGYGAIKRALLGSVSDYCAHNAPCTVTIVKPK 161

[Close]

BLAST of Lsi02G024000 vs. ExPASy TrEMBL
Match: A0A1S3BSL9 (universal stress protein A-like protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492818 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.9e-62
Identity = 122/168 (72.62%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 33  IAPMAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDV 92
           +A    T+KPVM+IGID+SEYAIGALEWTL+HFFSSTINPP F LILLHAKPIP++++D+
Sbjct: 1   MAATTTTKKPVMLIGIDESEYAIGALEWTLNHFFSSTINPPLFKLILLHAKPIPEIYLDI 60

Query: 93  AGPGMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDA 152
           +GPG           ILDQ+LK  AG IM+KA+EICA +SV DVEFVVEEGDAR VLC+ 
Sbjct: 61  SGPG-----------ILDQNLKKKAGNIMKKAKEICATRSVCDVEFVVEEGDARNVLCEG 120

Query: 153 VNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT 201
           VNK+ ASMLVVGSHGYGAIKRA LGSVSDYCAHHA CTV IVKPKP+T
Sbjct: 121 VNKYGASMLVVGSHGYGAIKRALLGSVSDYCAHHAQCTVIIVKPKPHT 157

[Close]

BLAST of Lsi02G024000 vs. NCBI nr
Match: XP_038899236.1 (universal stress protein PHOS32-like [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 145/165 (87.88%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 36  MAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGP 95
           M ATEKPVMVIGIDD EYA GALEWTLDHFFSSTINPPPF+LILLH KPIP+VFVDVAGP
Sbjct: 1   MTATEKPVMVIGIDDGEYATGALEWTLDHFFSSTINPPPFNLILLHVKPIPEVFVDVAGP 60

Query: 96  GMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNK 155
           GMV GSAPG+YQ+LDQ+LK  A RI EKAREICAAKSV+DVEFV EEGDARYVLC+AVNK
Sbjct: 61  GMVLGSAPGIYQVLDQNLKKKAERIKEKAREICAAKSVFDVEFVDEEGDARYVLCEAVNK 120

Query: 156 HRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT 201
           + ASMLVVGSHGYGAIKRAFLGSVSDYCAHHA CTVTIVKPKPNT
Sbjct: 121 YGASMLVVGSHGYGAIKRAFLGSVSDYCAHHAPCTVTIVKPKPNT 165

[Close]

BLAST of Lsi02G024000 vs. NCBI nr
Match: XP_031745099.1 (universal stress protein PHOS34 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-73
Identity = 138/183 (75.41%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 20  LLLISQLKPLHRGIAPMAA--TEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHL 79
           ++++ +LK    G  PMAA  T+KPVM+IGIDDSEYAIGALEWTL+HFFSSTINPP F L
Sbjct: 154 VMIVKKLK-TKEGTTPMAAATTKKPVMLIGIDDSEYAIGALEWTLNHFFSSTINPPLFKL 213

Query: 80  ILLHAKPIPQVFVDVAGPGMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVE 139
           ILLHAKPIP++++D++GPGM  GSAPG+YQ+LDQ+LK  AGRIMEKA+EICA++SV +VE
Sbjct: 214 ILLHAKPIPEIYLDISGPGMFMGSAPGLYQVLDQNLKKKAGRIMEKAKEICASRSVRNVE 273

Query: 140 FVVEEGDARYVLCDAVNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPK 199
           FVVEEGDAR VLC+ VNK+ ASMLVVGSHGYGAIKRA LGSVSDYCAHHA CT+TIVKPK
Sbjct: 274 FVVEEGDARNVLCEGVNKYGASMLVVGSHGYGAIKRALLGSVSDYCAHHAQCTITIVKPK 333

Query: 200 PNT 201
           PNT
Sbjct: 334 PNT 335

[Close]

BLAST of Lsi02G024000 vs. NCBI nr
Match: XP_008451580.1 (PREDICTED: universal stress protein A-like protein isoform X1 [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 4.3e-69
Identity = 128/168 (76.19%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 33  IAPMAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDV 92
           +A    T+KPVM+IGID+SEYAIGALEWTL+HFFSSTINPP F LILLHAKPIP++++D+
Sbjct: 1   MAATTTTKKPVMLIGIDESEYAIGALEWTLNHFFSSTINPPLFKLILLHAKPIPEIYLDI 60

Query: 93  AGPGMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDA 152
           +GPG   GSAPG+YQ+LDQ+LK  AG IM+KA+EICA +SV DVEFVVEEGDAR VLC+ 
Sbjct: 61  SGPGTFLGSAPGLYQVLDQNLKKKAGNIMKKAKEICATRSVCDVEFVVEEGDARNVLCEG 120

Query: 153 VNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT 201
           VNK+ ASMLVVGSHGYGAIKRA LGSVSDYCAHHA CTV IVKPKP+T
Sbjct: 121 VNKYGASMLVVGSHGYGAIKRALLGSVSDYCAHHAQCTVIIVKPKPHT 168

[Close]

BLAST of Lsi02G024000 vs. NCBI nr
Match: XP_022991250.1 (universal stress protein PHOS34-like [Cucurbita maxima])

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-68
Identity = 134/165 (81.21%), Postives = 146/165 (88.48%), Query Frame = 0


Query: 36  MAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGP 95
           MAATEKPVMVIGIDDSEYAI ALEWTLDH FSSTI PPPF +I++HAKPIP+ FV VAGP
Sbjct: 1   MAATEKPVMVIGIDDSEYAIAALEWTLDH-FSSTIYPPPFKIIVVHAKPIPETFVGVAGP 60

Query: 96  GMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNK 155
           GMVFGS PG+YQ+LDQ+LK  A RI+EKAREICAAKSV +V+F VEEGDARYVLC AV+K
Sbjct: 61  GMVFGSEPGLYQVLDQNLKRKAARIIEKAREICAAKSVSEVKFEVEEGDARYVLCKAVSK 120

Query: 156 HRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT 201
           H ASMLVVGSHGYGAIKRA LGSVSDYCAH+A CTVTIVK K  T
Sbjct: 121 HNASMLVVGSHGYGAIKRALLGSVSDYCAHNAPCTVTIVKLKTGT 164

[Close]

BLAST of Lsi02G024000 vs. NCBI nr
Match: XP_023547995.1 (universal stress protein PHOS34-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 2.1e-68
Identity = 132/162 (81.48%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 36  MAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGP 95
           MAATEKPVMVIGIDDSEY+I ALEWTLDH FSS I PPPF +I++HAKPIP+ FV VAGP
Sbjct: 1   MAATEKPVMVIGIDDSEYSIAALEWTLDH-FSSAIYPPPFKIIVVHAKPIPETFVGVAGP 60

Query: 96  GMVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNK 155
           GMVFGS PG+YQ+LDQ+LK  A RI+EKAREICAAKSV +V+F VEEGDARYVLC AV+K
Sbjct: 61  GMVFGSEPGLYQVLDQNLKRKAARIIEKAREICAAKSVSEVKFEVEEGDARYVLCKAVSK 120

Query: 156 HRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPK 198
           H ASMLVVGSHGYGAIKRA LGSVSDYCAH+A CTVTIVKPK
Sbjct: 121 HNASMLVVGSHGYGAIKRALLGSVSDYCAHNAPCTVTIVKPK 161

[Close]

BLAST of Lsi02G024000 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 41  KPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFHLILLHAKPIPQVFVDVAGPGMVFG 100
           K VMV+G+DDSE +  ALEWTLD FF+      PF L ++HAKP     V +AGPG    
Sbjct: 7   KSVMVVGVDDSEQSTYALEWTLDRFFAPYAPNYPFKLFIVHAKPNAVSAVGLAGPG---- 66

Query: 101 SAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNKHRASM 160
               +   +D  LK+TA +++EKA+ IC ++SV+     V EGDAR +LC+ V+KH AS+
Sbjct: 67  -TAEVVPYVDADLKHTAAKVVEKAKAICQSRSVHGAVIEVFEGDARNILCEVVDKHHASI 126

Query: 161 LVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVK 196
           LVVGSHGYGAIKRA LGS SDYCAHHA C+V IVK
Sbjct: 127 LVVGSHGYGAIKRAVLGSTSDYCAHHAHCSVMIVK 156

[Close]

BLAST of Lsi02G024000 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-27
Identity = 67/163 (41.10%), Postives = 96/163 (58.90%), Query Frame = 0


Query: 44  MVIGIDDSEYAIGALEWTLDHF-FSSTINPPPFHLILLHAKPIPQVFVDVAGPGMVFG-- 103
           +V+ +D SE ++ AL W LD+   SS+ +   F  ++LH +P P V   V+   + FG  
Sbjct: 10  VVVAVDGSEVSMEALRWALDNLKLSSSSSDSSF--VVLHVQPSPSVAAGVSPGTIPFGGP 69

Query: 104 ---SAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDARYVLCDAVNKHR 163
                P     ++QH K     I+E A +ICA KSV +V+  V  GD +Y +C+AV    
Sbjct: 70  SGLEVPAFTAAIEQHQKRITDTILEHASQICAEKSV-NVKTQVVIGDPKYKICEAVENLH 129

Query: 164 ASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKPKPNT 201
           A +LV+GS  YG IKR FLGSVS+YC +HA C V I+KPK ++
Sbjct: 130 ADLLVMGSRAYGRIKRMFLGSVSNYCTNHAHCPVVIIKPKEDS 169

[Close]

BLAST of Lsi02G024000 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-26
Identity = 67/171 (39.18%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 34  APMAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFH-----LILLHAK-PIPQ 93
           AP   T++  MV+ ID+S+ +  AL+W +DHF +  +           L ++H + P   
Sbjct: 27  APSLTTKR--MVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNH 86

Query: 94  VFVDVAGPG--MVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGDA 153
                AGPG   V+ S+  M + + +  + T+  ++ +A ++C AK +   E +V EG+A
Sbjct: 87  FAAFPAGPGGATVYASS-SMIESVKKAQQETSAALLSRALQMCRAKQI-RTETLVLEGEA 146

Query: 154 RYVLCDAVNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKP 197
           + ++C+AV K    +LVVGS G G IKRAFLGSVSDYCAHHA C + IVKP
Sbjct: 147 KEMICEAVEKMHVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKP 193

[Close]

BLAST of Lsi02G024000 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 6.2e-26
Identity = 67/172 (38.95%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 34  APMAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFH-----LILLHAK-PIPQ 93
           AP   T++  MV+ ID+S+ +  AL+W +DHF +  +           L ++H + P   
Sbjct: 27  APSLTTKR--MVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNH 86

Query: 94  VFVDVAGPG---MVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEGD 153
                AGPG    V+ S+  M + + +  + T+  ++ +A ++C AK +   E +V EG+
Sbjct: 87  FAAFPAGPGGATAVYASS-SMIESVKKAQQETSAALLSRALQMCRAKQI-RTETLVLEGE 146

Query: 154 ARYVLCDAVNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKP 197
           A+ ++C+AV K    +LVVGS G G IKRAFLGSVSDYCAHHA C + IVKP
Sbjct: 147 AKEMICEAVEKMHVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKP 194

[Close]

BLAST of Lsi02G024000 vs. TAIR 10
Match: AT3G11930.4 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 8.1e-26
Identity = 67/173 (38.73%), Postives = 101/173 (58.38%), Query Frame = 0


Query: 34  APMAATEKPVMVIGIDDSEYAIGALEWTLDHFFSSTINPPPFH-----LILLHAK-PIPQ 93
           AP   T++  MV+ ID+S+ +  AL+W +DHF +  +           L ++H + P   
Sbjct: 27  APSLTTKR--MVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNH 86

Query: 94  VFVDVAGPG----MVFGSAPGMYQILDQHLKNTAGRIMEKAREICAAKSVYDVEFVVEEG 153
                AGPG     V+ S+  M + + +  + T+  ++ +A ++C AK +   E +V EG
Sbjct: 87  FAAFPAGPGGATAAVYASS-SMIESVKKAQQETSAALLSRALQMCRAKQI-RTETLVLEG 146

Query: 154 DARYVLCDAVNKHRASMLVVGSHGYGAIKRAFLGSVSDYCAHHALCTVTIVKP 197
           +A+ ++C+AV K    +LVVGS G G IKRAFLGSVSDYCAHHA C + IVKP
Sbjct: 147 EAKEMICEAVEKMHVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKP 195

The following BLAST results are available for this feature:

BLAST of Lsi02G024000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4N1	4.2e-11	28.26	Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 S...	[more]
Q8VYN9	1.2e-10	28.66	Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 S...	[more]
Q8LGG8	3.0e-09	31.43	Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g0...	[more]
P9WFD0	4.1e-06	25.93	Universal stress protein MT2085 OS=Mycobacterium tuberculosis (strain CDC 1551 /...	[more]
P9WFD1	4.1e-06	25.93	Universal stress protein Rv2026c OS=Mycobacterium tuberculosis (strain ATCC 2561...	[more]

BLAST of Lsi02G024000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K632	1.5e-72	80.49	Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G397020 PE=4 SV...	[more]
A0A1S3BRS4	2.1e-69	76.19	universal stress protein A-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1JSC9	6.0e-69	81.21	universal stress protein PHOS34-like OS=Cucurbita maxima OX=3661 GN=LOC111487963...	[more]
A0A6J1GNW2	1.3e-68	81.48	universal stress protein PHOS34-like OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]
A0A1S3BSL9	1.9e-62	72.62	universal stress protein A-like protein isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Lsi02G024000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899236.1	1.1e-77	87.88	universal stress protein PHOS32-like [Benincasa hispida]	[more]
XP_031745099.1	1.7e-73	75.41	universal stress protein PHOS34 [Cucumis sativus]	[more]
XP_008451580.1	4.3e-69	76.19	PREDICTED: universal stress protein A-like protein isoform X1 [Cucumis melo]	[more]
XP_022991250.1	1.2e-68	81.21	universal stress protein PHOS34-like [Cucurbita maxima]	[more]
XP_023547995.1	2.1e-68	81.48	universal stress protein PHOS34-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi02G024000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47710.1	1.1e-41	54.84	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G09740.1	1.9e-27	41.10	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.1	4.8e-26	39.18	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.2	6.2e-26	38.95	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.4	8.1e-26	38.73	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006015	Universal stress protein A family	PRINTS	PR01438	UNVRSLSTRESS	coord: 155..167 score: 37.23 coord: 173..195 score: 36.52 coord: 41..59 score: 24.21
IPR006016	UspA	PFAM	PF00582	Usp	coord: 44..195 e-value: 1.1E-21 score: 77.9
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 33..200 e-value: 1.6E-40 score: 141.2
None	No IPR available	PANTHER	PTHR46553:SF3	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN	coord: 36..197
None	No IPR available	PANTHER	PTHR46553	FAMILY NOT NAMED	coord: 36..197
None	No IPR available	CDD	cd00293	USP_Like	coord: 44..194 e-value: 2.32394E-25 score: 93.5886
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 45..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G024000.1	Lsi02G024000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding