Lsi02G018810 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G018810
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Hybrid signal transduction protein dokA isoform X2
Location	chr02: 24686313 .. 24688557 (+)
RNA-Seq Expression	Lsi02G018810
Synteny	Lsi02G018810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGACGGCGTCGTTTTAGTACGGCGGTTGTCTTCGAGTTCAATCTCCGAGTTGAAAGCTTCACCGACTCAGCGACTGTGGCGTCCGGCGCTGAAGATCGCAGCCAAAAATTCTTTGAGGCTTCAACTTCAATGGAGGGAATCGGATCCAGATTGGGCCGAGCCTCGTCCCGGTACGGTCCCGCGGCCACCGTCTTCAACGGCCCCGTCCGGAAGTGGAAGAAGAAGTGGGTGTTGGCCTCTTCCTCTTCCTCCGGCCTCACTTACCAGCCCTCTTCTCAGTCCCAATCCAACGCTCAGAAGCTTCTTCTCTGCCGCTGGACTCCAGTTCATCCGCCTACTTCATCGGAAGCTGACGGAGCCGCGGCGCCGCCCGAAGAGCCGCCCAAACGGAAGTTCCGTTACACTCCTGTAAGTATAAAGCTCTATCTGAATCCATTTTGCATGTGCGATTGGTGCTGTGTGTGTGTGGTGAGTGAGTGATTGCGATTGCGATTGCGTTTGTCGCATGTGAATTGGGAGTGTTACCGATTTCTTAAGTGAGGGGTTTGTGAAGTTCTTCGTCAATCTCGTCTATCGTTGATTTTTTCATGGACGATGCAATTCTTGATATTGATTTGTATTAGTAATTTTTAGTTTCTACTTACTGATTTTAGCATGCGCTGCCTTTTGGGAACAATTTAAGGGTGTTGTTTCTCTTGGTTTCTGTCTTGAATATGAGTATAGGTCATTTTGTATTCTGTTCTTATTGTTGCCTGTTCCTCTTGATTAGGATTTAACTGCGAGCAAACAATTTGATTATTTTGGTCGTGATGTGCAGATTGCTGTGCTGGAGGAGCAGAAAAATGCAGAATTGAGAAGTGTTAAAGATGAAGTTAGAGTGAAAGAAATGGACCAGTCGGCGGCAAAGATGGCTACTGTGAGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGGTTTTTAAGGAAGAAACTCAGGTGACTGACTGATTTCAACTTGGTTTGTTTAACTTGTGAAGTTTCTTTGTTAGTATAGTTCAATTAATTTAGGCATATGTCATCGACCCATAGGTTATAGGTTCAAAACCAGTTTGAAACACCCATTCACATTTTGGTGGAACTAAAAAAGGGAAAAAGTGATTTCTGATTGTCTTTGGCTAAATTGAATCATTCATATCAGATTTCAAAGAGCTATTAGGAATACTTGTTAATTGAGATAGTTACATGCTTATGTTGTTTATAATCATTAACTAACAAATAAAAATCTGAAACTTGTGTGGTTTTGATCAACATGAACATAACTCGACGATAATTAGCATGTACTCCTTTTGGATGGGAGGTTCAAATCTCCATTCCTCCACATCTATTGTATTCAACCAAACGAGAGGGGGATTCTGGTTTAGGAAACCCACCGAGTAATGAGCTTGTTAGGATACTTCCTAACTAGAATAAGGTATGAAATATATTTAGATATAAAGATGAAACTACAAGATTATCCACCTTCCCTCTTGAGTTTGCTAATCCAAGATCACTCAATTATTGTCGCCCTTCCCTCAATACCCCTCCCTTTATTAACAAACTCCCTAATTACTAATATCATACTATCATCTCTAAGTAGCTTACAGTGCACTATGGAAAAATTAAAGCCTGCTTAACCAATTCACATACTCATGAACTGTGGCATATGCATAGCTTACCAGGTTACATAATCATAGATAAGCTAGCTAGATCAGTACAAAATGGTAGAATTTTCTCATGAACTTGATGAACCCGAACCATTCTCTTCGCAGGAAACAAGCAAGATTCTGAACAGCAGCTCACGAGATGGAAGCAGGAACAACTTAGATTTGGCTTTGTGCTTGAATGGTCAGAAACAGATCCAAGATTCTGCCGGTAAGAGCTCTTAAAATCTGCAAACAGGATGGAGCTGAAGCCGGTTTGAACCCTATGGACAATGGTATAGCAGAAATTTAGTCTCTTATGTGAATTAGTATCTCATCCAATGGTAATTTGGAAGCATAATATATTATAGTGACTGTTTGTATATGATCTTAGGGTTAGTGGGGGGGATGGATCAGTATATAATCTAGAAGAACTTTGTTGGAATTTGTTTGTTATGGAAAATGTATTTATTCTTCCTTAATAATGTGCAATCAGAATGCTGTAGGAAAAACCAGCTCTTGTGAAGGAATTATGTTCATGAAAATGTTTATATAAATGTTCATATAAATGTTGATAGTGCTC

mRNA sequence

GAAAGACGGCGTCGTTTTAGTACGGCGGTTGTCTTCGAGTTCAATCTCCGAGTTGAAAGCTTCACCGACTCAGCGACTGTGGCGTCCGGCGCTGAAGATCGCAGCCAAAAATTCTTTGAGGCTTCAACTTCAATGGAGGGAATCGGATCCAGATTGGGCCGAGCCTCGTCCCGGTACGGTCCCGCGGCCACCGTCTTCAACGGCCCCGTCCGGAAGTGGAAGAAGAAGTGGGTGTTGGCCTCTTCCTCTTCCTCCGGCCTCACTTACCAGCCCTCTTCTCAGTCCCAATCCAACGCTCAGAAGCTTCTTCTCTGCCGCTGGACTCCAGTTCATCCGCCTACTTCATCGGAAGCTGACGGAGCCGCGGCGCCGCCCGAAGAGCCGCCCAAACGGAAGTTCCGTTACACTCCTGATTTAACTGCGAGCAAACAATTTGATTATTTTGGTCGTGATGTGCAGATTGCTGTGCTGGAGGAGCAGAAAAATGCAGAATTGAGAAGTGTTAAAGATGAAGTTAGAGTGAAAGAAATGGACCAGTCGGCGGCAAAGATGGCTACTGTGAGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGGTTTTTAAGGAAGAAACTCAGGAAACAAGCAAGATTCTGAACAGCAGCTCACGAGATGGAAGCAGGAACAACTTAGATTTGGCTTTGTGCTTGAATGGTCAGAAACAGATCCAAGATTCTGCCGGTAAGAGCTCTTAAAATCTGCAAACAGGATGGAGCTGAAGCCGGTTTGAACCCTATGGACAATGGTATAGCAGAAATTTAGTCTCTTATGTGAATTAGTATCTCATCCAATGGTAATTTGGAAGCATAATATATTATAGTGACTGTTTGTATATGATCTTAGGGTTAGTGGGGGGGATGGATCAGTATATAATCTAGAAGAACTTTGTTGGAATTTGTTTGTTATGGAAAATGTATTTATTCTTCCTTAATAATGTGCAATCAGAATGCTGTAGGAAAAACCAGCTCTTGTGAAGGAATTATGTTCATGAAAATGTTTATATAAATGTTCATATAAATGTTGATAGTGCTC

Coding sequence (CDS)

ATGGAGGGAATCGGATCCAGATTGGGCCGAGCCTCGTCCCGGTACGGTCCCGCGGCCACCGTCTTCAACGGCCCCGTCCGGAAGTGGAAGAAGAAGTGGGTGTTGGCCTCTTCCTCTTCCTCCGGCCTCACTTACCAGCCCTCTTCTCAGTCCCAATCCAACGCTCAGAAGCTTCTTCTCTGCCGCTGGACTCCAGTTCATCCGCCTACTTCATCGGAAGCTGACGGAGCCGCGGCGCCGCCCGAAGAGCCGCCCAAACGGAAGTTCCGTTACACTCCTGATTTAACTGCGAGCAAACAATTTGATTATTTTGGTCGTGATGTGCAGATTGCTGTGCTGGAGGAGCAGAAAAATGCAGAATTGAGAAGTGTTAAAGATGAAGTTAGAGTGAAAGAAATGGACCAGTCGGCGGCAAAGATGGCTACTGTGAGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGGTTTTTAAGGAAGAAACTCAGGAAACAAGCAAGATTCTGAACAGCAGCTCACGAGATGGAAGCAGGAACAACTTAGATTTGGCTTTGTGCTTGAATGGTCAGAAACAGATCCAAGATTCTGCCGGTAAGAGCTCTTAA

Protein sequence

MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLLCRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAELRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNLDLALCLNGQKQIQDSAGKSS

Homology

[Close]

BLAST of Lsi02G018810 vs. ExPASy TrEMBL
Match: A0A6J1FD66 (uncharacterized protein LOC111442943 OS=Cucurbita moschata OX=3662 GN=LOC111442943 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.7e-79
Identity = 167/200 (83.50%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNAQKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HP TSSEADGAAAPPEEPP+RKFRYTP                IAVLEEQKNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNL 180
           LRSVKDEVRVKEMDQSA+K ATV NEAQGELNVNEVFKEETQETSKILN S RDG+RNNL
Sbjct: 121 LRSVKDEVRVKEMDQSASKTATVGNEAQGELNVNEVFKEETQETSKILN-SPRDGNRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 201
           DLALCLNGQ   QDSAGKSS
Sbjct: 181 DLALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Lsi02G018810 vs. ExPASy TrEMBL
Match: A0A6J1ILX5 (uncharacterized protein LOC111476793 OS=Cucurbita maxima OX=3661 GN=LOC111476793 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 8.4e-79
Identity = 166/200 (83.00%), Postives = 171/200 (85.50%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNA KLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAHKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HP TSSEADGAAAPPEEPP+RKFRYTP                IAVLEEQKNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNL 180
           LRSVKDEVRVKE DQSA+KMATV NEAQGELNVNEVFKEETQETSKILN S RDG RNNL
Sbjct: 121 LRSVKDEVRVKETDQSASKMATVGNEAQGELNVNEVFKEETQETSKILN-SPRDGDRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 201
           DLALCLNGQ   QDSAGKSS
Sbjct: 181 DLALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Lsi02G018810 vs. ExPASy TrEMBL
Match: A0A0A0K8E5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145940 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.1e-78
Identity = 163/199 (81.91%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL YQ SS SQSNAQKLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HPPTSSEAD A APP+EPPKRKFRYTP                IAVLEEQK+AE
Sbjct: 61  CRWTPIHPPTSSEADEATAPPDEPPKRKFRYTP----------------IAVLEEQKSAE 120

Query: 121 LRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNL 180
           LRSVKDEVR+KEMDQ AAK ATV NEA GELNVNE+FKEETQETSK LN S RDGSRNNL
Sbjct: 121 LRSVKDEVRMKEMDQLAAKTATVGNEALGELNVNEIFKEETQETSKNLN-SPRDGSRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKS 200
           DLALCLNGQK++QDSAGKS
Sbjct: 181 DLALCLNGQKKVQDSAGKS 182

[Close]

BLAST of Lsi02G018810 vs. ExPASy TrEMBL
Match: A0A5D3DHK3 (Hybrid signal transduction protein dokA isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00190 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 161/201 (80.10%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL YQ SS SQSNAQKLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HPPTSSEAD  + PP+EPPKRKFRYTP                IAVLEEQK+AE
Sbjct: 61  CRWTPIHPPTSSEADETSPPPDEPPKRKFRYTP----------------IAVLEEQKSAE 120

Query: 121 LRSVKDEVRVKEMDQSAAK-MATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNN 180
           +RSVKDEVR+KEMDQ AAK  A V NEA GELNVNEVFKEETQETSK LN S RDGSRNN
Sbjct: 121 MRSVKDEVRMKEMDQLAAKTAAAVGNEALGELNVNEVFKEETQETSKNLN-SPRDGSRNN 180

Query: 181 LDLALCLNGQKQIQDSAGKSS 201
           LDLALCLNGQK++QDSAGKSS
Sbjct: 181 LDLALCLNGQKKVQDSAGKSS 184

[Close]

BLAST of Lsi02G018810 vs. ExPASy TrEMBL
Match: A0A1S3BHG2 (uncharacterized protein LOC103490123 OS=Cucumis melo OX=3656 GN=LOC103490123 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.6e-75
Identity = 161/201 (80.10%), Postives = 168/201 (83.58%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL YQ SS SQSNAQKLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HPPTSSEAD  + PP+EPPKRKFRYTP                IAVLEEQK+AE
Sbjct: 61  CRWTPIHPPTSSEADETSPPPDEPPKRKFRYTP----------------IAVLEEQKSAE 120

Query: 121 LRSVKDEVRVKEMDQSAAK-MATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNN 180
            RSVKDEVR+KEMDQ AAK  A V NEA GELNVNEVFKEETQETSK LN S RDGSRNN
Sbjct: 121 TRSVKDEVRMKEMDQLAAKTAAAVGNEALGELNVNEVFKEETQETSKNLN-SPRDGSRNN 180

Query: 181 LDLALCLNGQKQIQDSAGKSS 201
           LDLALCLNGQK++QDSAGKSS
Sbjct: 181 LDLALCLNGQKKVQDSAGKSS 184

[Close]

BLAST of Lsi02G018810 vs. NCBI nr
Match: XP_038898202.1 (uncharacterized protein LOC120085942 [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 5.2e-83
Identity = 172/200 (86.00%), Postives = 176/200 (88.00%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTY PSSQSQSNAQKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYHPSSQSQSNAQKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HPPTSSEADG  APP+EPPKRKFRYTP                IAVLEEQKNAE
Sbjct: 61  CRWTPIHPPTSSEADGTTAPPDEPPKRKFRYTP----------------IAVLEEQKNAE 120

Query: 121 LRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNL 180
           LRS+KDEVRVKEMDQ AAK ATV NEAQGELNVNEVFKEETQETSKILNS S DGSRNNL
Sbjct: 121 LRSIKDEVRVKEMDQLAAKTATVGNEAQGELNVNEVFKEETQETSKILNSPS-DGSRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 201
           DLALCLNG+KQIQDSAGKSS
Sbjct: 181 DLALCLNGRKQIQDSAGKSS 183

[Close]

BLAST of Lsi02G018810 vs. NCBI nr
Match: XP_022936275.1 (uncharacterized protein LOC111442943 [Cucurbita moschata])

HSP 1 Score: 305.4 bits (781), Expect = 3.5e-79
Identity = 167/200 (83.50%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNAQKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HP TSSEADGAAAPPEEPP+RKFRYTP                IAVLEEQKNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNL 180
           LRSVKDEVRVKEMDQSA+K ATV NEAQGELNVNEVFKEETQETSKILN S RDG+RNNL
Sbjct: 121 LRSVKDEVRVKEMDQSASKTATVGNEAQGELNVNEVFKEETQETSKILN-SPRDGNRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 201
           DLALCLNGQ   QDSAGKSS
Sbjct: 181 DLALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Lsi02G018810 vs. NCBI nr
Match: XP_022976368.1 (uncharacterized protein LOC111476793 [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 1.7e-78
Identity = 166/200 (83.00%), Postives = 171/200 (85.50%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNA KLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAHKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HP TSSEADGAAAPPEEPP+RKFRYTP                IAVLEEQKNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNL 180
           LRSVKDEVRVKE DQSA+KMATV NEAQGELNVNEVFKEETQETSKILN S RDG RNNL
Sbjct: 121 LRSVKDEVRVKETDQSASKMATVGNEAQGELNVNEVFKEETQETSKILN-SPRDGDRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 201
           DLALCLNGQ   QDSAGKSS
Sbjct: 181 DLALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Lsi02G018810 vs. NCBI nr
Match: XP_023536003.1 (uncharacterized protein LOC111797276 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 5.0e-78
Identity = 164/200 (82.00%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNAQKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HP TSSEADG AAPPEEPP+RKFRYTP                IAVLEEQKNA 
Sbjct: 61  CRWTPIHPSTSSEADGTAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNL 180
           LRSVKDEVRVKEMDQSA+K ATV N+AQG+LNVNEVFKEETQETSKILN S RDG+RNNL
Sbjct: 121 LRSVKDEVRVKEMDQSASKTATVGNDAQGDLNVNEVFKEETQETSKILN-SPRDGNRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 201
           DLALCLNGQ   QDSAGKSS
Sbjct: 181 DLALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Lsi02G018810 vs. NCBI nr
Match: KAG6592060.1 (hypothetical protein SDJN03_14406, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024937.1 hypothetical protein SDJN02_13757, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.2 bits (770), Expect = 6.6e-78
Identity = 165/200 (82.50%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSN+QKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNSQKLLL 60

Query: 61  CRWTPVHPPTSSEADGAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIAVLEEQKNAE 120
           CRWTP+HP TSSEADGAAA PEEPP+RKFRYTP                IAVLEEQKNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAAPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LRSVKDEVRVKEMDQSAAKMATVSNEAQGELNVNEVFKEETQETSKILNSSSRDGSRNNL 180
           LRSVKDEVRVKEMDQSA+K ATV NEAQGELNVNEVFKEETQETSKILN S RDG+RNNL
Sbjct: 121 LRSVKDEVRVKEMDQSASKTATVGNEAQGELNVNEVFKEETQETSKILN-SPRDGNRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 201
           DLALCLNGQ   QDSAGKSS
Sbjct: 181 DLALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Lsi02G018810 vs. TAIR 10
Match: AT4G22320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). )

HSP 1 Score: 88.2 bits (217), Expect = 8.2e-18
Identity = 76/222 (34.23%), Postives = 108/222 (48.65%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQ-------- 60
           MEG+G+RLGR+S+RYGP ATVF GPVRKWKKKWV  S SS       SS S         
Sbjct: 1   MEGVGARLGRSSTRYGP-ATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAAAAASVVN 60

Query: 61  -------SNAQKLLLCRWTPVHPPTSSEADG-----------AAAPPEEPPKRKFRYTPD 120
                  SN   LLL +W P+    +   DG            A   E+PP+R+F+Y P 
Sbjct: 61  GGSNSDGSNGSHLLLYKWAPLSQNGNGNEDGKSESNSPSEDTVATVAEDPPRRRFKYVPI 120

Query: 121 LTASKQFDYFGR-DVQIAVLEEQKNAELRSVKDEVRV---KEMDQSAAKMATVSNEAQGE 180
               +Q       +    + E+ K  E   V+ E +V   K +++S+ K A V  E + +
Sbjct: 121 AVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEV--EVEEK 180

Query: 181 LNVNEVFKEETQETSKILNSSS-----RDGSRNNLDLALCLN 188
            ++N+V  E+ Q   KI+         +D + + +DL L LN
Sbjct: 181 PDINDVPMEDIQVEEKIVQDDEEKVVRQDLNESTVDLGLNLN 219

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BLAST of Lsi02G018810 vs. TAIR 10
Match: AT4G22320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 5.3e-17
Identity = 76/223 (34.08%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQ-------- 60
           MEG+G+RLGR+S+RYGP ATVF GPVRKWKKKWV  S SS       SS S         
Sbjct: 1   MEGVGARLGRSSTRYGP-ATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAAAAASVVN 60

Query: 61  -------SNAQKLLLCRWTPVHPPTSSEADG-----------AAAPPEEPPKRKFRYTPD 120
                  SN   LLL +W P+    +   DG            A   E+PP+R+F+Y P 
Sbjct: 61  GGSNSDGSNGSHLLLYKWAPLSQNGNGNEDGKSESNSPSEDTVATVAEDPPRRRFKYVPI 120

Query: 121 LTASKQFDYFGR-DVQIAVLEEQKNAELRSVKDEVRV---KEMDQSAAKMATVSNEAQGE 180
               +Q       +    + E+ K  E   V+ E +V   K +++S+ K A V  E + +
Sbjct: 121 AVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEV--EVEEK 180

Query: 181 LNVNEVFKEETQET-SKILNSSS-----RDGSRNNLDLALCLN 188
            ++N+V  E+ Q+   KI+         +D + + +DL L LN
Sbjct: 181 PDINDVPMEDIQQVEEKIVQDDEEKVVRQDLNESTVDLGLNLN 220

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BLAST of Lsi02G018810 vs. TAIR 10
Match: AT5G55210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 5.3e-17
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRY-GPAAT-VFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQK- 60
           MEG+GSRL R SSRY GPAAT VF+G VRKWKKKWV  S+SS G+     S  ++N+   
Sbjct: 1   MEGVGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWVRVSTSSVGVFRASKSNGRNNSNNS 60

Query: 61  -----LLLCRWTPVHPPTSSEAD-GAAAPPEEPPKRKFRYTPDLTASKQFDYFGRDVQIA 120
                LLL +WTP+   T + +D   +   EE PKR+FRY P      +     +D +I 
Sbjct: 61  NSPHHLLLHKWTPLTSATVTASDANGSGETEESPKRRFRYAPIAMLEHREKVISKDSEIE 120

Query: 121 VLEE--QKNAELRSVKDEVRVKEMDQS 137
             EE   ++   ++V+ ++ + + DQ+
Sbjct: 121 ETEEFDTESPLPKAVELDMNLTDSDQT 147

The following BLAST results are available for this feature:

BLAST of Lsi02G018810 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G018810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FD66	1.7e-79	83.50	uncharacterized protein LOC111442943 OS=Cucurbita moschata OX=3662 GN=LOC1114429...	[more]
A0A6J1ILX5	8.4e-79	83.00	uncharacterized protein LOC111476793 OS=Cucurbita maxima OX=3661 GN=LOC111476793...	[more]
A0A0A0K8E5	7.1e-78	81.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145940 PE=4 SV=1	[more]
A0A5D3DHK3	2.5e-75	80.10	Hybrid signal transduction protein dokA isoform X2 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BHG2	5.6e-75	80.10	uncharacterized protein LOC103490123 OS=Cucumis melo OX=3656 GN=LOC103490123 PE=...	[more]

BLAST of Lsi02G018810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898202.1	5.2e-83	86.00	uncharacterized protein LOC120085942 [Benincasa hispida]	[more]
XP_022936275.1	3.5e-79	83.50	uncharacterized protein LOC111442943 [Cucurbita moschata]	[more]
XP_022976368.1	1.7e-78	83.00	uncharacterized protein LOC111476793 [Cucurbita maxima]	[more]
XP_023536003.1	5.0e-78	82.00	uncharacterized protein LOC111797276 [Cucurbita pepo subsp. pepo]	[more]
KAG6592060.1	6.6e-78	82.50	hypothetical protein SDJN03_14406, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi02G018810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22320.2	8.2e-18	34.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G22320.1	5.3e-17	34.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G55210.1	5.3e-17	40.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..92
None	No IPR available	PANTHER	PTHR34572	GOLGIN FAMILY A PROTEIN	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G018810.1	Lsi02G018810.1	mRNA