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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAATGTTTTGTTATCCAAATAAGTCAGCAATGGATCAATCTTGTCATGCCTGCCATATGCTTTGATCACATAACTTTTCAGGTATATGCTTGTGAAGTTGTACAGTATTATGTTTAGTTATTATCCGATAGTTTGATTTGCTGTGTTGATTATGGATTTGCTACAATCTTGTGGATGCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGAAAGGAAAAGACAAATGGGATCCACCATAGCAATGAGATGGTTGCAGAATTTAATGCTGCCAACCCAACTTGTTCCAGCTTATATTTCTCTCTGTACCATTACTTAATTACCTGA mRNA sequence ATGAATCAATGGATCAATCTTGTCATGCCTGCCATATGCTTTGATCACATAACTTTTCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGAAAGGAAAAGACAAATGGGATCCACCATAGCAATGAGATGGTTGCAGAATTTAATGCTGCCAACCCAACTTGTTCCAGCTTATATTTCTCTCTGTACCATTACTTAATTACCTGA Coding sequence (CDS) ATGAATCAATGGATCAATCTTGTCATGCCTGCCATATGCTTTGATCACATAACTTTTCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGAAAGGAAAAGACAAATGGGATCCACCATAGCAATGAGATGGTTGCAGAATTTAATGCTGCCAACCCAACTTGTTCCAGCTTATATTTCTCTCTGTACCATTACTTAATTACCTGA Protein sequence MNQWINLVMPAICFDHITFQCLLDFQPSFCGVKGKEKTNGIHHSNEMVAEFNAANPTCSSLYFSLYHYLIT
Homology
BLAST of Lsi02G000650 vs. ExPASy TrEMBL
Match: A0A0A0LTA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033070 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 9.1e-28 Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0
Query: 9 MPAICFDHITFQCLLDFQPSFCGVKGKEKTNGIHHSNEMVAEFNAANPTCSSLYFSLYHY 68
MPAICFDHI FQCLLDFQPSFCGVKGKEKTNGIHHS++MVAEFNAANPTCSSLYFSLYH+
Sbjct: 1 MPAICFDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSKMVAEFNAANPTCSSLYFSLYHH 60
Query: 69 LIT 72
LIT
Sbjct: 61 LIT 63
BLAST of Lsi02G000650 vs. NCBI nr
Match: KGN63987.1 (hypothetical protein Csa_014108 [Cucumis sativus]) HSP 1 Score: 132.1 bits (331), Expect = 1.9e-27 Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0
Query: 9 MPAICFDHITFQCLLDFQPSFCGVKGKEKTNGIHHSNEMVAEFNAANPTCSSLYFSLYHY 68
MPAICFDHI FQCLLDFQPSFCGVKGKEKTNGIHHS++MVAEFNAANPTCSSLYFSLYH+
Sbjct: 1 MPAICFDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSKMVAEFNAANPTCSSLYFSLYHH 60
Query: 69 LIT 72
LIT
Sbjct: 61 LIT 63
BLAST of Lsi02G000650 vs. NCBI nr
Match: KAG6584453.1 (hypothetical protein SDJN03_20385, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11 Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query: 26 QPSFCGVKGKEKTNGIHHSNEMVAEFNAANPTCSSLYFSL 66
QPSFCGV+ KEKTNGIHHS+EMVAEFNAANPTCS+LYF L
Sbjct: 7 QPSFCGVQEKEKTNGIHHSSEMVAEFNAANPTCSTLYFPL 46
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A0A0LTA5 | 9.1e-28 | 93.65 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033070 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN63987.1 | 1.9e-27 | 93.65 | hypothetical protein Csa_014108 [Cucumis sativus] | [more] |
| KAG6584453.1 | 1.9e-11 | 87.50 | hypothetical protein SDJN03_20385, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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