Lsi01G017080 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G017080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DnaJ/Hsp40 cysteine-rich domain superfamily protein isoform 2
Location	chr01: 15771463 .. 15777177 (+)
RNA-Seq Expression	Lsi01G017080
Synteny	Lsi01G017080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTTTATGTCAAACAAATGAAAACGTCACCAATGGCCACCAAAATTCATTCATCAATTTGCCATCTGCAATTCGTTAATAACGAGAGAGAAATACCCAATCTTCGAGCTCACCTGTAGGCTGTAAGCATCGAAGTGAGCTATTGTATTGGCGATTTCCTCGAGAATTTCTTCAATTCGAGCTTTAATTTCCCTTTCCGCGCTTTGGAGGTCAATTTCATCGAAGATTTCCTTCTTTCATACGCAAATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGTTGGTACTTTTCAAATTGCTTATGTGATTTTATTTTCTGTTTTCCGAGTATTTATTGAAAGTTCTTTATTCAATGACTCAGTCTATTATACATTCATTTTCGTGTATTTGAAGGTGTTTGGTTTGATGCATACATAGGATTGTAATTGGCTCTTTTCAGCTATGTTTTTCTGATAGATTATAATTGGCTCTTTTCAGCATTTTGGTTTAAAGTTATTGCTCTGTTGTTTTTTTTCTTCTTATATTTGCATTCAGTTTAAACTTGACAAGGTTTAATGAGAGAGTTATGAAGATACAAACGGATACAAAAAAACCAAGCCCACAACAGGAAGCACCCTAGAAAAAGGGTCTCCAATCTAACAAAAATAAGATCTAACGAATAATTACAAAAAGAACTCGTCAGAGTCGCCCAAAGCAAAACATTAAACTTTTCCGGGGACCAAACAAAGCTTCCCTCTTAGCCCCTCAAAAAATCCTATTGTTTTTCTCTCCCCAAATGCCCCATAACATGGCATACACCCCAACCTTCCATAAATTATCCCCTCTCCCTCCACACGGCGAATGGAAGAGGAACTCCTCAATCATAACACTAAAATTTCTATGCTCGGCTAACTTGTAGTCAAACACCCCAAAGAAGATGTTCCGAACCAAACATGCAAAAGTATAATTTCAAAAAGTGATCCAAGTCTTCCTCGGCCATTTGCGAGGAATACAACAAAAAGGAGCAACCAAGGACATCTTTCTTGAAAGCCTATCCAAGGTATTAATTCTTCCACGAATCACCTGCCAAATAAAAAATTTCACCTTCGTTGGAATTTTCACCTTCCAAAGAAGAGAAAAAAACTGACTCTCTAAAGGGAAAAAGATCCAAGAGATTTAGAAAAAGAAAACTCTTAGAAGGGTTAAAGACTCCAACAACAAAAATCCTTTCTCCCTTGCCTAACCCCAACATCCCCCAATACGAAAGGAGGGTCACAACCTCCATCGTTACCCTATTGGACAAAGGACAACGAAACTCGAACAAAACACGAGAAGAGCTCTCTGAAAGCATCAAAACATCAGCAACAAAACAAATTTTCTTATTAGAAATGTGATAAGGATGAGGAAATTTACTGCAAAGGGGGCGATCCCCCAACTCATCTCCCACCACATAGTGGATCAACTCAGAGAACGAGGGGGCATCCAAAGAAATCCCTTTCAATGGATTCCTGAAGTGCCTTTAATCCTATCCGATATCCTATCAAAAGGATGAGGACCATACTTGCTTATAATAATCCAAGATCGTAGGGGTGAGGACTTAAAGGGTAAAACATAGAGCTCCCACATGTGATAATGGTGGTCTCTTTATATAACTATTGTTTGTCTGATGTTTAAATTGCAAAAGCTCTCATCTCATATTTTTGAAAAGAACCATTTTTATGAAGTGGTATAATTCCTTAGGATAATACTTTTGGCACCACGGCTCGTTGCCTGTTGGATTGGCATAATTGTTCGAATCTTGCAAGAGCATTTGTTTGTGATTTTTGATAATTAAACAAACATTTGCGACAGGTGCTCTGGTAAAGATTATATCAACCTTACCTTCTCTTTAATGAAAATCTAAGCAATTAATATTTTATGTCATTAGCATTTGGCAACTGTAACTAGACCTCAAGCATAAGCTCCTTAAACTTTTTGCCTTATTCTGTCCTATGCTTGTCTACATGTTTGTGATTGTGTATGGAATCATATGCTTGCAAGTGTATAGTTCTGCATTCATATTGCCATATGTTACAGTTTTGAGAATATTGTCAAATTTTCTGGATGTAGCAGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTCGTTGTCTGGGTAAACTTGCATTCTTTCTTGAACTATTAGTATTAGTTGTAGCAACATTTAGGAGTGGTTCAAATTATGGACATTCTTTTTAACTGGAGCCCTGTTTTGTAATTTTCTTGTCTTTACCTTACCCCCTGTTTTCTGTTGCTCTTTTGGCTCCTTTAGGTTCAGGCCTCCCCTTTTTGTAGGGCTCTTTTTTTGGCTTGCCCGTTTATATTCTTTCATTTGTTCTCAAATGAAAGTCATTTTCTTATCCGGAAGGGCACTTTTTATTTTGATCCTGTCAGATTGTTACTTATCAGTGGCCATCGTGGATGTTTAACTTTGAAAGTAGAAAAGAAGTCGACAAGATACTAGATGTAGTTTATTCCTGTAATCATTTCCATATATCTTAAATGTTTTTAAGAAATCAATGCTGGAAACTGTGGAAGCTTTTGAATTGATTAGGCTTGTTTTTTGTCCTGTGCATTTCATTCAATTATACTTGTTGAAAAGGGAATTTTTTTTGTTTCATCACTGTCAGTTGTCAGTTAACTTATTGAAAAGTTTCTGTCCTAACTCTGTAATCATCTTCTTGTAGGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGAGTTGCAAAGACTCCTTTCCAAAAGATTCATCTTGAACTGTCCCCAGCTGTAATATGCATGGATCGATGATGGGATATATTAATCTTGCAATTTAGTGAAGATCAATAGAGTTCATTTTTCATTTAGGCAGTTTGTGGGATATTCTTACATAATTTGGTTCAATTTTGATTTAGTTCAAATTACTCCCAGTGTTCCCTTCCCGCAACATTTGTACTTGTAAGTCACATCGACACAGACTTCTTTCTGAACAGAAAGTTGTATGAACTATGACGTCTGAAATATATGAACTACAAGAAAAGTTTTCACAATTACTGCATGTATCTCTTTGTTTTTTTTTTGTTTTTTTACTATTTTTAGTAGTTATGAAGCTTTATTATGTGTTGAACAAAAAAAATAGAATCTACCCGAAATTTTTCTCTAAAATTTCCACAAGGAAAGCCGAAAGAACAAGATTTGCAGGGAAAAGGAAAGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGTGTTGGGGTTGTGGAAGAAAGAAGAATAAAGCCGGCATTTATGTTTCAGTGGGTTCCACGAAAGGCATTTTCTTCCTTATGCCAGTCTCTTACTGGAACTTGAGGAATGATCTAAATCTGCATCTTCACTTGTTTTTTCAATTCATGGTTGATTAAACTTGCAATCTCCGCCGGAGGTCTCGAATCCGTTCTGGTACAGTGGAATCAAACCGAGGATGCAGGGGATTGTCTGCATAAGCCACATAGTAGGCAGACACACATGCTTGCGGCCACGCCATTGCTATTCGACACTGCAACAACAACCATGAGCATTGTCATCCAGAAGTTAAATTCCTCTCAGGTATTACCACTAAATTCAGTTAAAGTTTAGAACAGTTCTTTCTTTTTTCGTTTAATGATTCAGCTCATTACCAGAAAATAGCCAATTAGGAAGGCGTAGATTGCTAATTCTGTTGCATAGTTCTTGTGTATTACAAGTGCCCAGATCCCACTTATAATGCTGCAGATTGCACCACCTGAAACCCCGCAGAGAACGCAGAAGGACACAGTGAGATCAGAGTCTATAACGATTCCCAAATCCACCCTTTTGAATGCCTCCCAGGTATCATATGAAGCCTGCACAATCCCTTTATTGTAAACACCGACGTGGACGAAACCCCACCTGTTTCCATGGTTTCTCAGCATCGAAGCCAATCCCGAGTAGCAGTTTGCACAAGAGAAAAGGAACTCATCCGAGTCTCCTGCCACCAGCCTCATGGAACGGGCAGATCCCTGAATGAAGCTGATAAGGGGGATGATGACTGAGCCAAGAGAAATAGTTCCAACTGAATACTTTATTGTGTCATGGAAAGCTGCTCGTATGTCCTTTTCATGACCCCAAGCTAAATTCAAGTACTTTATGCGTGAGATTGTAACTTGCACTATGTTCTTGATGACCTGCAGACTCCATGTTAAGCTCAACAGTATTGCTGCTATGAACAATGCTTTAAAACTAGACCTAACAGCAATTGCTCCACCGATGCCGATGACCAAGAAAGATGCATAAAGGATGCCAATGACGATTGATCCAATGACAAAGATTGGAGTGTTCGTTGGTGGGTATTTAGTAGAAAGTGATAGAAGTTGAATTGCATAATTCAACCGGTGATTGATCCAACAGACATATACAGACAGAATCAAGGAAGAAACTATGAGGATTACTCCTGCTGCTAAACCGCCACGAGATCCAACAATGACAAAGAAAATGCCAGAAGCGAGTGATAGAACAGGGCTAAACCAGAAGGCTGTCTTGAAAGCCATAGAAGGAGAGCAGCCAGTAAAGGCCTGCCATAAAAAGGCAATGATTCCAGAGCTTCCAATAGAAGCCAACAATGGAGGGTACCACTTTTCCGGGAGAAAATTATGTGTTTTAGAAGCCGACCGAAGTCCTCGAACAGTCAAAAAAATCACCAACACAGCTACCAGACATAAATGCACATTGAAAACTATGCTAGAAAACCACCTGAAAATTCTCCATCCCACAGCAGGCTCATTCAGATGGATCGGTTCT

mRNA sequence

GCTTTTTATGTCAAACAAATGAAAACGTCACCAATGGCCACCAAAATTCATTCATCAATTTGCCATCTGCAATTCGTTAATAACGAGAGAGAAATACCCAATCTTCGAGCTCACCTGTAGGCTGTAAGCATCGAAGTGAGCTATTGTATTGGCGATTTCCTCGAGAATTTCTTCAATTCGAGCTTTAATTTCCCTTTCCGCGCTTTGGAGGTCAATTTCATCGAAGATTTCCTTCTTTCATACGCAAATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGAGTTGCAAAGACTCCTTTCCAAAAGATTCATCTTGAACTGTCCCCAGCTGCAGACACACATGCTTGCGGCCACGCCATTGCTATTCGACACTGCAACAACAACCATGAGCATTGTCATCCAGAAGTTAAATTCCTCTCAGATCCCACTTATAATGCTGCAGATTGCACCACCTGAAACCCCGCAGAGAACGCAGAAGGACACAGTGAGATCAGAGTCTATAACGATTCCCAAATCCACCCTTTTGAATGCCTCCCAGACATATACAGACAGAATCAAGGAAGAAACTATGAGGATTACTCCTGCTGCTAAACCGCCACGAGATCCAACAATGACAAAGAAAATGCCAGAAGCGAGTGATAGAACAGGGCTAAACCAGAAGGCTGTCTTGAAAGCCATAGAAGGAGAGCAGCCAGTAAAGGCCTGCCATAAAAAGGCAATGATTCCAGAGCTTCCAATAGAAGCCAACAATGGAGGGTACCACTTTTCCGGGAGAAAATTATGTGTTTTAGAAGCCGACCGAAGTCCTCGAACAGTCAAAAAAATCACCAACACAGCTACCAGACATAAATGCACATTGAAAACTATGCTAGAAAACCACCTGAAAATTCTCCATCCCACAGCAGGCTCATTCAGATGGATCGGTTCT

Coding sequence (CDS)

ATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGAGTTGCAAAGACTCCTTTCCAAAAGATTCATCTTGAACTGTCCCCAGCTGCAGACACACATGCTTGCGGCCACGCCATTGCTATTCGACACTGCAACAACAACCATGAGCATTGTCATCCAGAAGTTAAATTCCTCTCAGATCCCACTTATAATGCTGCAGATTGCACCACCTGAAACCCCGCAGAGAACGCAGAAGGACACAGTGAGATCAGAGTCTATAACGATTCCCAAATCCACCCTTTTGAATGCCTCCCAGACATATACAGACAGAATCAAGGAAGAAACTATGAGGATTACTCCTGCTGCTAAACCGCCACGAGATCCAACAATGACAAAGAAAATGCCAGAAGCGAGTGATAGAACAGGGCTAAACCAGAAGGCTGTCTTGAAAGCCATAGAAGGAGAGCAGCCAGTAAAGGCCTGCCATAAAAAGGCAATGATTCCAGAGCTTCCAATAGAAGCCAACAATGGAGGGTACCACTTTTCCGGGAGAAAATTATGTGTTTTAGAAGCCGACCGAAGTCCTCGAACAGTCAAAAAAATCACCAACACAGCTACCAGACATAAATGCACATTGAAAACTATGCTAGAAAACCACCTGAAAATTCTCCATCCCACAGCAGGCTCATTCAGATGGATCGGTTCT

Protein sequence

MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLSKRFILNCPQLQTHMLAATPLLFDTATTTMSIVIQKLNSSQIPLIMLQIAPPETPQRTQKDTVRSESITIPKSTLLNASQTYTDRIKEETMRITPAAKPPRDPTMTKKMPEASDRTGLNQKAVLKAIEGEQPVKACHKKAMIPELPIEANNGGYHFSGRKLCVLEADRSPRTVKKITNTATRHKCTLKTMLENHLKILHPTAGSFRWIGS

Homology

[Close]

BLAST of Lsi01G017080 vs. ExPASy TrEMBL
Match: A0A6J1IPP7 (uncharacterized protein LOC111478329 OS=Cucurbita maxima OX=3661 GN=LOC111478329 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 142/164 (86.59%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAAD 60
           MDS++LT+SSS I RNS+QKLLAIRKIQDGLCFERNKFSKI AVYPNGSASG GD SAAD
Sbjct: 1   MDSSSLTISSSFIFRNSAQKLLAIRKIQDGLCFERNKFSKIFAVYPNGSASGPGDFSAAD 60

Query: 61  VHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSG 120
           VHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNPRCTDC AKGAVLC+TCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS 164
           LYVDSILESQGIIVKVVV+L IPCVQN AV VTWDLNE QRL+S
Sbjct: 121 LYVDSILESQGIIVKVVVELVIPCVQNAAVVVTWDLNEFQRLVS 164

[Close]

BLAST of Lsi01G017080 vs. ExPASy TrEMBL
Match: A0A0A0L441 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G580370 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-61
Identity = 125/135 (92.59%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADV 60
           MDSATLTMSSSVILRNSS KLL IRKIQ  LCF+RNKFSKISA+YPNGSASGGDSSAADV
Sbjct: 1   MDSATLTMSSSVILRNSSLKLLVIRKIQPPLCFKRNKFSKISALYPNGSASGGDSSAADV 60

Query: 61  HRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGL 120
           HRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPRCTDCQAKGAVLC+TCSGSGL
Sbjct: 61  HRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSGL 120

Query: 121 YVDSILESQGIIVKV 136
           YVDSILESQGIIVKV
Sbjct: 121 YVDSILESQGIIVKV 135

[Close]

BLAST of Lsi01G017080 vs. ExPASy TrEMBL
Match: A0A1S3B5F7 (uncharacterized protein LOC103486023 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486023 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-59
Identity = 121/135 (89.63%), Postives = 130/135 (96.30%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADV 60
           MDSATLT+SSSVILRNSS KLL IRKIQ  LCF+RN+FS+ISA+Y NGSASGGDSSAADV
Sbjct: 1   MDSATLTLSSSVILRNSSLKLLVIRKIQPSLCFKRNEFSRISALYANGSASGGDSSAADV 60

Query: 61  HRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGL 120
           HRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPRCTDCQAKGAVLC+TCSGSGL
Sbjct: 61  HRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSGL 120

Query: 121 YVDSILESQGIIVKV 136
           YVDSILESQGIIVKV
Sbjct: 121 YVDSILESQGIIVKV 135

[Close]

BLAST of Lsi01G017080 vs. ExPASy TrEMBL
Match: A0A1S3B4T2 (uncharacterized protein LOC103486023 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486023 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.1e-58
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAAD 60
           MDSATLT+SSSVILRNSS KLL IRKIQ  LCF+RN+FS+ISA+Y NGSASG GDSSAAD
Sbjct: 1   MDSATLTLSSSVILRNSSLKLLVIRKIQPSLCFKRNEFSRISALYANGSASGQGDSSAAD 60

Query: 61  VHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSG 120
           VHRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPRCTDCQAKGAVLC+TCSGSG
Sbjct: 61  VHRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSG 120

Query: 121 LYVDSILESQGIIVKV 136
           LYVDSILESQGIIVKV
Sbjct: 121 LYVDSILESQGIIVKV 136

[Close]

BLAST of Lsi01G017080 vs. ExPASy TrEMBL
Match: A0A6J1GFH6 (uncharacterized protein LOC111453701 OS=Cucurbita moschata OX=3662 GN=LOC111453701 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAAD 60
           MDS++LT+SSS I RNSSQKLLAIRKIQDGLCF+RNKFSKI AVYPNGSASG  D SAAD
Sbjct: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60

Query: 61  VHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSG 120
           VHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNPRCTDC AKGAVLC+TCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKV 136
           LYVDSILESQGIIVKV
Sbjct: 121 LYVDSILESQGIIVKV 136

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: KAG7033643.1 (hypothetical protein SDJN02_03367, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.8 bits (795), Expect = 1.5e-80
Identity = 206/364 (56.59%), Postives = 231/364 (63.46%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAAD 60
           MDS++LT+SSS I RNSSQKLLAIRKIQDGLCF+RNKFSKI AVYPNGSASG  D SAAD
Sbjct: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60

Query: 61  VHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSG 120
           VHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNPRCTDC AKGAVLC+TCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKV--------------------VVDLAIPCVQNVAVEVTWDLNE-- 180
           LYVDSILESQGIIVKV                    ++ LA       +    W   E  
Sbjct: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRGLIKLATSAEVLESGLAQWSRTEDA 180

Query: 181 ---LQRLLSKRFILNCPQLQTHMLAATPLLFDTA----TTTMSIVIQKLNSSQIPLIMLQ 240
              L +L S+         QTHML A P  FDTA    TTTM+IVIQKLNSSQIPLIMLQ
Sbjct: 181 GDCLHKLRSR---------QTHMLVAMPFRFDTATTTTTTTMNIVIQKLNSSQIPLIMLQ 240

Query: 241 IAPPETPQRTQKDTVRSESITIPKSTLLNASQ-TYTDRIKEETMRITPAAKPPRDPTMTK 300
           IAPPETPQRTQ DTVRSESITI KST  NASQ     R   E+      A+   DP   +
Sbjct: 241 IAPPETPQRTQNDTVRSESITISKSTFSNASQGAQEKRNSSESPATNLMAR--ADPVHVR 300

Query: 301 KMPEASDRTGLNQKAVLKAIEGEQPVKACHKKAM--IPELPIEANNGGYHFSGRKLCVLE 332
               A+    L    +  A       KA ++  M   P+  I    GGY        ++E
Sbjct: 301 LNSIAAMNNALKLDVIEVAPPMPMTTKAAYRTPMRIDPKTKIGVFVGGY--------LVE 345

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: KAG7027468.1 (hypothetical protein SDJN02_11481 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.7 bits (753), Expect = 1.1e-75
Identity = 176/261 (67.43%), Postives = 195/261 (74.71%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADV 60
           MDSATL +SSSVI+R+SS KL + R+IQ  LCFER KFSKI AVYPNGSAS GDSS ADV
Sbjct: 1   MDSATLAVSSSVIVRSSSLKLFSSRRIQAELCFERRKFSKIFAVYPNGSASKGDSSGADV 60

Query: 61  HRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGL 120
           HRRRS+ E+LFCYDKA+PEERIETPVGISLAEKMIGDNPRC++C AKGAVLC+TCSGSGL
Sbjct: 61  HRRRSTSETLFCYDKAIPEERIETPVGISLAEKMIGDNPRCSECHAKGAVLCTTCSGSGL 120

Query: 121 YVDSILESQGIIVKV------VVDLAIPCVQNVAVEVTWDLNELQRLLSKRFILNCP-QL 180
           YVDSILESQGIIVKV      +++LAI      +    W   E          L+ P   
Sbjct: 121 YVDSILESQGIIVKVRCLVYDLINLAISAEGLESALARWSRTE-----DAGDCLHKPHSR 180

Query: 181 QTHMLAATPLLFDTA-TTTMSIVIQKLN--------SSQIPLIMLQIAPPETPQRTQKDT 240
           Q HML ATP L  TA T  M+IVIQKLN        S+QIPLIMLQIAPPE+PQR QKDT
Sbjct: 181 QKHMLVATPFLSGTAITEAMNIVIQKLNCSQLLCITSAQIPLIMLQIAPPESPQRKQKDT 240

Query: 241 VRSESITIPKSTLLNASQTYT 246
           VRSE ITI KS LLNASQT T
Sbjct: 241 VRSEFITISKSALLNASQTPT 256

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: XP_022978300.1 (uncharacterized protein LOC111478329 [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-70
Identity = 142/164 (86.59%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAAD 60
           MDS++LT+SSS I RNS+QKLLAIRKIQDGLCFERNKFSKI AVYPNGSASG GD SAAD
Sbjct: 1   MDSSSLTISSSFIFRNSAQKLLAIRKIQDGLCFERNKFSKIFAVYPNGSASGPGDFSAAD 60

Query: 61  VHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSG 120
           VHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNPRCTDC AKGAVLC+TCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS 164
           LYVDSILESQGIIVKVVV+L IPCVQN AV VTWDLNE QRL+S
Sbjct: 121 LYVDSILESQGIIVKVVVELVIPCVQNAAVVVTWDLNEFQRLVS 164

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: XP_023543495.1 (uncharacterized protein LOC111803362 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-69
Identity = 142/164 (86.59%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAAD 60
           MDS +LT+SSS I RNSSQ LLAIRKIQDGLCFERNKFSKI AVYPNGSASG GD SAAD
Sbjct: 1   MDSTSLTISSSFIFRNSSQILLAIRKIQDGLCFERNKFSKIFAVYPNGSASGPGDFSAAD 60

Query: 61  VHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSG 120
           VHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNPRCTDC AKGAVLC+TCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS 164
           LYVDSILESQGIIVKVVV+L IPCVQN AV VTWDLNE QRL+S
Sbjct: 121 LYVDSILESQGIIVKVVVELVIPCVQNAAVLVTWDLNEFQRLVS 164

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: XP_038881866.1 (uncharacterized protein LOC120073222 isoform X2 [Benincasa hispida])

HSP 1 Score: 247.3 bits (630), Expect = 2.1e-61
Identity = 126/135 (93.33%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADV 60
           MDSATLTMSSSVILRNSSQKLLA RKIQ GLCF RNKFSKISAVYPNGSASGGDSS ADV
Sbjct: 1   MDSATLTMSSSVILRNSSQKLLANRKIQPGLCFARNKFSKISAVYPNGSASGGDSSPADV 60

Query: 61  HRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGL 120
           HRRRSSFESLFCYDKA+PEERIETPVGISLAE+MIGDNPRCTDC AKG VLC+TCSGSGL
Sbjct: 61  HRRRSSFESLFCYDKAIPEERIETPVGISLAERMIGDNPRCTDCHAKGVVLCATCSGSGL 120

Query: 121 YVDSILESQGIIVKV 136
           YVDSILESQGIIVKV
Sbjct: 121 YVDSILESQGIIVKV 135

[Close]

BLAST of Lsi01G017080 vs. TAIR 10
Match: AT5G17840.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 3.5e-30
Identity = 61/96 (63.54%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 40  KISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP 99
           ++ ++ P+ S         DVHR+RSS ES+FCYDK +PEE IE PVG+S++E+ IGDN 
Sbjct: 35  RLCSLPPSSSIKAESCLKRDVHRQRSSLESMFCYDKPIPEEIIEEPVGLSMSEREIGDNQ 94

Query: 100 RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV 136
           RCT C+AKGA+LCSTCSG+GLYVDSI+ESQGIIVKV
Sbjct: 95  RCTCCEAKGALLCSTCSGTGLYVDSIMESQGIIVKV 130

The following BLAST results are available for this feature:

BLAST of Lsi01G017080 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G017080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPP7	1.6e-70	86.59	uncharacterized protein LOC111478329 OS=Cucurbita maxima OX=3661 GN=LOC111478329...	[more]
A0A0A0L441	1.7e-61	92.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G580370 PE=4 SV=1	[more]
A0A1S3B5F7	1.2e-59	89.63	uncharacterized protein LOC103486023 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B4T2	3.1e-58	88.97	uncharacterized protein LOC103486023 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GFH6	1.3e-56	87.50	uncharacterized protein LOC111453701 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]

BLAST of Lsi01G017080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033643.1	1.5e-80	56.59	hypothetical protein SDJN02_03367, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7027468.1	1.1e-75	67.43	hypothetical protein SDJN02_11481 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022978300.1	3.2e-70	86.59	uncharacterized protein LOC111478329 [Cucurbita maxima]	[more]
XP_023543495.1	2.1e-69	86.59	uncharacterized protein LOC111803362 [Cucurbita pepo subsp. pepo]	[more]
XP_038881866.1	2.1e-61	93.33	uncharacterized protein LOC120073222 isoform X2 [Benincasa hispida]	[more]

BLAST of Lsi01G017080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17840.1	3.5e-30	63.54	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..276
None	No IPR available	PANTHER	PTHR15852:SF13	DNAJ/HSP40 CYSTEINE-RICH DOMAIN SUPERFAMILY PROTEIN	coord: 41..135
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 41..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G017080.1	Lsi01G017080.1	mRNA