Lsi01G011390 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAATGGTGAAACGTGGACACATAGCGATCCGAGTGTATCTTCAACCTATATATATACAAAAGCGCCAGATTTTTCCTTCAAGAAAATGATGTTATCCGTTTCCCTGAGATAATCACTACAAACAAAACACACACACAAGCTCCGATTCCCCCAACAAGGAGCTGAGTGTGAGACAGAACCCTAAACCCACTTTCACTTCAGCATTTGGCAGCCGAGAGTGACGAGAAAGGCGGCGTTTTGGGTGGGGGACACAATCGTTCTTCCTTCTTTGTTTCTTTAATGGCAATTCCCACTTCCCTCATTCCCACTTTGTCTTTCGATACTATCTCCAGCTCTGCTTCTTATTCTTCCTCCTCCTTTTCATTGCAATTTCTTAATCCCTTCAAACCCCATTGTCATGGTTTAAAGATGGATAATCCCACCTCAAATGGGTCGCTCGTTGTTAACTCTTCCGCTCGCGAAATGGGTTCCAACTCTGACCCTTTAAACCGGAGGTATGGATAATGGATATGTCCGTTCCCCCCGCCCCTGTATTCTTTTTTTTGTGTGTGTTAATGAATTTGTCGTTGATAATTGCTTCGAAATTACGAATTGAACTAGTTATTATAATTTGTATATGGGAAATTGTTCGATCTCTAATGTTGGTTTGTTTTGGTGTGCTTGCATAGATAGTTTTGTTGTCGTGAAGTAGAGTGACTAGCAGAGTTTGTTCTTTCTCTCCCTGTTGTAAGAGTTTGAATGAGTGAAGGATAAGATGCTTCCCATTGTTTTGGAGATTGAGTTCTTCTTTTGTTGTTGTTTTCTGTGACTGTTGGAGTTTCCTAGGATGGTAGGAAGACGATAACTTCAAGGAAGGAATGACATTATCTTTGTTCATCTCAATCGAATAAACTACTTCGGTTCGATTGGATATTCGTCTTCTTTCTTTATAAACATAAAACACAATACTGTGTTGAATGAGATTGCCTGTCATCGGGATTGCTGTGTACCCCTACATGAATCATATTTTTCAAGTTCTAGACTGCAGATTGTAAATAAAACTTTAAACACAACAGTATGTTTGTGAAGCTTCTGAAAGTAGAAACTTATTTTATTTCCTCTATGAACATATGTACAGGGTTTGTTGCGAAAGAAATGATAAGGATCTCATCAATGGTTTAAAACTGACAAAATGCCGTTTTGTTTTTAGGAAGTGAATGATAGCACAAGTTTCAATTTATCTCCCTTACCATATTGGGTATACCCTGTCATTGAGTTGGTTTTGTCAGTTAGCATTGAAAGCTGACTCATTGTTTTTAAGCTAGCATTGGATTGTTCTCCTAATTGATTATGGAAAAGGCTTTTCATTTGCTCTTCTTGGGAACGAGGGTGTTTTTTAGGTTGTATAGCTATTCATACTTAATGATGACCTGGTTCTTCTCGTTGTTTTGTTGGCTATGGCCTTCTCTAGATGGATTCACTGTTTCCAGTGACCTATGCTTCTCCTGCTCTTGTTTAAAGATATTTGGCGTTTCTTTTAACTTTTCCTTTATTTTATTGTATTCTTTTTCTCTAGCCTGAAGCATCAAATATCATCTATTTCTCCTAGTGGGAGGACACTAAGTGAAGCTTCCATGTCCATGCCATCGTATAAATGGCGAAGAGTATTGCTTAAAGTAAGCGGTGAAGCACTTGCTGGTGATCGGTTGCAGAATATTGATCCAAAGGTTGGTGTTTGAAGGATGATTGGTGTTACATGTATACAATGTCATTTTCATGATTTTTGACTCCTTACATTTCTTTTGAGCTACTTCTTGACTGCAGGTTACTATGGCAATTGCGAGGGAGGTTGCAGCTGTTACCCGTCTGGGCATTGAGGTAGCTCAACCTTTATATGCATACATGATTTTTTTCTCTATGATTCCATGCATATGTTCAAATGAATCTTGCTGCTGTAACAACAATAACCTGTGTGACTGTTTGGAGAGATACAAATCCATTGATTGAATATGACTTGTTCTCGACCAACTTTCTTCCTCGACTCTCAAAAGAATTGAGTAAACAGTTTTGGAAATTCTGATTCTTCGCTAGCGCACAGCACACCTTATGTTTGTAGAGTAGGCCAATGAATATTGATGAATCTATTATCTTATTTAAGAGTAACGGAGTTCTGAAGCCAATTCTTTTTCCTTCTTTTTCTTTATTAGATTCTTTTTCCTCGTTTGGAATGCGCGATCATTATGGTTGATGTTTTGTTTCAGGTTGCTATAGTAGTTGGTGGGGGTAACATTTTCCGTGGATCCTCGTGGGCCGGATGTAGTGGTTTGGACCGATCATCTGCTGATTACATCGGGTAATTTCCTTTATACTATATATTTCTGGAGTCTTTTGGTACCACATTTTGCTATTTTGCACATGCCTGTATGCAAGCAACGTGAAGATTCACAAAAAATGAAGATGGAATAGGAATATATCTCTATCATGTTGAGTACATGAAAGGATATCATACTTGTTAATCATATGAAAACAATAACATATTCCATTCATATTAAAAATCCTCATCTTTTCTATGGTATTGGACTACATTCCTGGAAACAACCACCACTAGATATTTGACCAGTAATATCTAGTATTAAGATTGTTTCAAGTATGCTGGTGGACATTGTGCATTACTGGTTTTGAAAATTTAGTTCTATATTTACAGGATGTTGGCAACAGTCATGAATGCTATATTTCTTCAAGCCACAATGGAGAGTATAGGCATTCCTACACGAGTGCAGACGGCGTTTCGCATGTCCGAGGTTGCAGAGCCTTATATTCGACGTAGGGCTGTGAGGCACTTGGAAAAAGGAAGAGTTGTGATCTTTGCAGCTGGTACAGGCAATCCGTTTTTCACAACAGATACTGCAGCAGCCCTCCGTTGTGCAGAAAGTGAGTCAAATCGCATTAAGGGTCTTATTGGAATGGTCTTCAAAGTTCTTATAGAAGTGTTTATAAATGAAAAAAAAAAGTGTTTTTAAGCACTTAGAAAATCATTCCAAACAGACGCTAAAGTTCTTACTTTAACTAATTACTGAAACGTGTCTGGTGTTCAGCAATAAATTATCTCTATAGCTCTGACTTTCAAATTGTCTATCCAGTTAATGCTGAAGTTCTGCTGAAAGCAACAAACGTTGACGGGGTTTATGACGATGATCCAAGGGAAAACCCAAATGCACGATTACTCGAGACTCTTACGTACCAGGAGGTGACTTCGAAGGACCTTTCGGTGATGGACATGACAGCCATTACTCTATGCCAGGAAAATAACATTCCTGGTATGTATTGTATATCTCTTTGTAGTTTATATTATAGATCATTGTTCTTCAAAATAACTGAACAAACAACAGAAGGCAATACAAGCTGTTGACATTGGCTTAGAATAAACTGAACTAATGATTATTTTGCTTCAACTTGCAGTTGTTGTCTTCAATCTAACAAAACCAGACAACATCTCGAAAGCCATACAGGGCGAGAGAGTCGGGACGTTGATCGGAGGAACATGGAACTCAATGGTAGCAAGTAAATGAAGATGATGCTTGTATGAGCCATCCATTGTGCAAGAGCTCATTAGTAGGGATTTGACAGGAGATTTAGAGCTATCTCTATATCTTTTCACATTGGTAGCTATTTTGGACTTATGAGAGATGATTTATTATGTAAATAACCCAGTGAAACTGAAAGCAGACCCCTGTTCAACTCTTCATTGAATGTTGAATGGACATTATATTTTTTTTTTTTA ATAATGGTGAAACGTGGACACATAGCGATCCGAGTGTATCTTCAACCTATATATATACAAAAGCGCCAGATTTTTCCTTCAAGAAAATGATGTTATCCGTTTCCCTGAGATAATCACTACAAACAAAACACACACACAAGCTCCGATTCCCCCAACAAGGAGCTGAGTGTGAGACAGAACCCTAAACCCACTTTCACTTCAGCATTTGGCAGCCGAGAGTGACGAGAAAGGCGGCGTTTTGGGTGGGGGACACAATCGTTCTTCCTTCTTTGTTTCTTTAATGGCAATTCCCACTTCCCTCATTCCCACTTTGTCTTTCGATACTATCTCCAGCTCTGCTTCTTATTCTTCCTCCTCCTTTTCATTGCAATTTCTTAATCCCTTCAAACCCCATTGTCATGGTTTAAAGATGGATAATCCCACCTCAAATGGGTCGCTCGTTGTTAACTCTTCCGCTCGCGAAATGGGTTCCAACTCTGACCCTTTAAACCGGAGCCTGAAGCATCAAATATCATCTATTTCTCCTAGTGGGAGGACACTAAGTGAAGCTTCCATGTCCATGCCATCGTATAAATGGCGAAGAGTATTGCTTAAAGTAAGCGGTGAAGCACTTGCTGGTGATCGGTTGCAGAATATTGATCCAAAGGTTACTATGGCAATTGCGAGGGAGGTTGCAGCTGTTACCCGTCTGGGCATTGAGGTTGCTATAGTAGTTGGTGGGGGTAACATTTTCCGTGGATCCTCGTGGGCCGGATGTAGTGGTTTGGACCGATCATCTGCTGATTACATCGGGATGTTGGCAACAGTCATGAATGCTATATTTCTTCAAGCCACAATGGAGAGTATAGGCATTCCTACACGAGTGCAGACGGCGTTTCGCATGTCCGAGGTTGCAGAGCCTTATATTCGACGTAGGGCTGTGAGGCACTTGGAAAAAGGAAGAGTTGTGATCTTTGCAGCTGTTAATGCTGAAGTTCTGCTGAAAGCAACAAACGTTGACGGGGTTTATGACGATGATCCAAGGGAAAACCCAAATGCACGATTACTCGAGACTCTTACGTACCAGGAGGTGACTTCGAAGGACCTTTCGGTGATGGACATGACAGCCATTACTCTATGCCAGGAAAATAACATTCCTGTTGTTGTCTTCAATCTAACAAAACCAGACAACATCTCGAAAGCCATACAGGGCGAGAGAGTCGGGACGTTGATCGGAGGAACATGGAACTCAATGGTAGCAAGTAAATGAAGATGATGCTTGTATGAGCCATCCATTGTGCAAGAGCTCATTAGTAGGGATTTGACAGGAGATTTAGAGCTATCTCTATATCTTTTCACATTGGTAGCTATTTTGGACTTATGAGAGATGATTTATTATGTAAATAACCCAGTGAAACTGAAAGCAGACCCCTGTTCAACTCTTCATTGAATGTTGAATGGACATTATATTTTTTTTTTTTA ATGGCAATTCCCACTTCCCTCATTCCCACTTTGTCTTTCGATACTATCTCCAGCTCTGCTTCTTATTCTTCCTCCTCCTTTTCATTGCAATTTCTTAATCCCTTCAAACCCCATTGTCATGGTTTAAAGATGGATAATCCCACCTCAAATGGGTCGCTCGTTGTTAACTCTTCCGCTCGCGAAATGGGTTCCAACTCTGACCCTTTAAACCGGAGCCTGAAGCATCAAATATCATCTATTTCTCCTAGTGGGAGGACACTAAGTGAAGCTTCCATGTCCATGCCATCGTATAAATGGCGAAGAGTATTGCTTAAAGTAAGCGGTGAAGCACTTGCTGGTGATCGGTTGCAGAATATTGATCCAAAGGTTACTATGGCAATTGCGAGGGAGGTTGCAGCTGTTACCCGTCTGGGCATTGAGGTTGCTATAGTAGTTGGTGGGGGTAACATTTTCCGTGGATCCTCGTGGGCCGGATGTAGTGGTTTGGACCGATCATCTGCTGATTACATCGGGATGTTGGCAACAGTCATGAATGCTATATTTCTTCAAGCCACAATGGAGAGTATAGGCATTCCTACACGAGTGCAGACGGCGTTTCGCATGTCCGAGGTTGCAGAGCCTTATATTCGACGTAGGGCTGTGAGGCACTTGGAAAAAGGAAGAGTTGTGATCTTTGCAGCTGTTAATGCTGAAGTTCTGCTGAAAGCAACAAACGTTGACGGGGTTTATGACGATGATCCAAGGGAAAACCCAAATGCACGATTACTCGAGACTCTTACGTACCAGGAGGTGACTTCGAAGGACCTTTCGGTGATGGACATGACAGCCATTACTCTATGCCAGGAAAATAACATTCCTGTTGTTGTCTTCAATCTAACAAAACCAGACAACATCTCGAAAGCCATACAGGGCGAGAGAGTCGGGACGTTGATCGGAGGAACATGGAACTCAATGGTAGCAAGTAAATGA MAIPTSLIPTLSFDTISSSASYSSSSFSLQFLNPFKPHCHGLKMDNPTSNGSLVVNSSAREMGSNSDPLNRSLKHQISSISPSGRTLSEASMSMPSYKWRRVLLKVSGEALAGDRLQNIDPKVTMAIAREVAAVTRLGIEVAIVVGGGNIFRGSSWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAVNAEVLLKATNVDGVYDDDPRENPNARLLETLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLTKPDNISKAIQGERVGTLIGGTWNSMVASK Homology
BLAST of Lsi01G011390 vs. ExPASy Swiss-Prot
Match: Q2JS42 (Uridylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=pyrH PE=3 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 3.2e-69 Identity = 138/236 (58.47%), Postives = 173/236 (73.31%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy Swiss-Prot
Match: Q2JJE2 (Uridylate kinase OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=pyrH PE=3 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 9.4e-69 Identity = 137/234 (58.55%), Postives = 172/234 (73.50%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy Swiss-Prot
Match: Q10Y48 (Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=pyrH PE=3 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.5e-66 Identity = 134/234 (57.26%), Postives = 167/234 (71.37%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy Swiss-Prot
Match: P74457 (Uridylate kinase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=pyrH PE=3 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.7e-65 Identity = 135/233 (57.94%), Postives = 168/233 (72.10%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy Swiss-Prot
Match: Q3MFI4 (Uridylate kinase OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=pyrH PE=3 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 3.7e-65 Identity = 134/235 (57.02%), Postives = 170/235 (72.34%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy TrEMBL
Match: A0A1S3B213 (uridylate kinase OS=Cucumis melo OX=3656 GN=LOC103485265 PE=3 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 3.0e-155 Identity = 300/340 (88.24%), Postives = 308/340 (90.59%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy TrEMBL
Match: A0A0A0KHT3 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G483490 PE=3 SV=1) HSP 1 Score: 555.1 bits (1429), Expect = 2.0e-154 Identity = 298/340 (87.65%), Postives = 308/340 (90.59%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy TrEMBL
Match: A0A6J1GEU0 (uncharacterized protein LOC111453283 OS=Cucurbita moschata OX=3662 GN=LOC111453283 PE=3 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 8.6e-150 Identity = 292/340 (85.88%), Postives = 302/340 (88.82%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy TrEMBL
Match: A0A6J1BSV5 (uncharacterized protein LOC111005242 OS=Momordica charantia OX=3673 GN=LOC111005242 PE=3 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 1.0e-147 Identity = 292/344 (84.88%), Postives = 303/344 (88.08%), Query Frame = 0
BLAST of Lsi01G011390 vs. ExPASy TrEMBL
Match: A0A6J1IMJ4 (uncharacterized protein LOC111478766 OS=Cucurbita maxima OX=3661 GN=LOC111478766 PE=3 SV=1) HSP 1 Score: 531.6 bits (1368), Expect = 2.3e-147 Identity = 288/340 (84.71%), Postives = 299/340 (87.94%), Query Frame = 0
BLAST of Lsi01G011390 vs. NCBI nr
Match: XP_038880866.1 (uridylate kinase [Benincasa hispida]) HSP 1 Score: 585.5 bits (1508), Expect = 2.8e-163 Identity = 312/340 (91.76%), Postives = 317/340 (93.24%), Query Frame = 0
BLAST of Lsi01G011390 vs. NCBI nr
Match: XP_008441028.1 (PREDICTED: uridylate kinase [Cucumis melo]) HSP 1 Score: 557.8 bits (1436), Expect = 6.3e-155 Identity = 300/340 (88.24%), Postives = 308/340 (90.59%), Query Frame = 0
BLAST of Lsi01G011390 vs. NCBI nr
Match: XP_004148645.1 (uncharacterized protein LOC101221565 [Cucumis sativus] >KGN48369.1 hypothetical protein Csa_003079 [Cucumis sativus]) HSP 1 Score: 555.1 bits (1429), Expect = 4.1e-154 Identity = 298/340 (87.65%), Postives = 308/340 (90.59%), Query Frame = 0
BLAST of Lsi01G011390 vs. NCBI nr
Match: XP_022950099.1 (uncharacterized protein LOC111453283 [Cucurbita moschata]) HSP 1 Score: 539.7 bits (1389), Expect = 1.8e-149 Identity = 292/340 (85.88%), Postives = 302/340 (88.82%), Query Frame = 0
BLAST of Lsi01G011390 vs. NCBI nr
Match: XP_023543285.1 (uncharacterized protein LOC111803210 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 533.9 bits (1374), Expect = 9.7e-148 Identity = 290/338 (85.80%), Postives = 300/338 (88.76%), Query Frame = 0
BLAST of Lsi01G011390 vs. TAIR 10
Match: AT3G18680.1 (Amino acid kinase family protein ) HSP 1 Score: 395.2 bits (1014), Expect = 5.0e-110 Identity = 234/345 (67.83%), Postives = 260/345 (75.36%), Query Frame = 0
BLAST of Lsi01G011390 vs. TAIR 10
Match: AT3G10030.1 (aspartate/glutamate/uridylate kinase family protein ) HSP 1 Score: 208.4 bits (529), Expect = 8.7e-54 Identity = 122/276 (44.20%), Postives = 171/276 (61.96%), Query Frame = 0
BLAST of Lsi01G011390 vs. TAIR 10
Match: AT3G10030.2 (aspartate/glutamate/uridylate kinase family protein ) HSP 1 Score: 178.7 bits (452), Expect = 7.4e-45 Identity = 106/251 (42.23%), Postives = 151/251 (60.16%), Query Frame = 0
BLAST of Lsi01G011390 vs. TAIR 10
Match: AT4G19710.1 (aspartate kinase-homoserine dehydrogenase ii ) HSP 1 Score: 43.9 bits (102), Expect = 2.8e-04 Identity = 32/86 (37.21%), Postives = 44/86 (51.16%), Query Frame = 0
BLAST of Lsi01G011390 vs. TAIR 10
Match: AT4G19710.2 (aspartate kinase-homoserine dehydrogenase ii ) HSP 1 Score: 43.9 bits (102), Expect = 2.8e-04 Identity = 32/86 (37.21%), Postives = 44/86 (51.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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