Lsi01G006150 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTTTTGCAGACCAAAATCTGCCTTCGCATTTCCACAATCATCTTCTTCCTCATCTTTCTGCTGTCTGAGAAATCTTATTGTATCAGAATTCCGAATCGAATCGTAGAACCTATTAAGACTACGTCAAGCCATCAGTCCTTGAAAACGGCAGTTTTCGCTCTAGGAAGTTTCTGGAGATCCGAAGCCGTCTTCGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACGAAACAGAATCCTGAGTATCGTAGCTTGGGGGATCACGCCGAGTCTGTACGGGTTCGGGCTCTTACCTTCTCTTTTCCTTTTCATTTCTTATTTTTCTTATTGCTTAATTTTCACTTTTCACTTTGTGAATTTTCTGTATTCTACATTTCGGATGATGTTGTGGATGCCATTATTTCGGTAGATCCTGTCTATACGTTTGGTCATATTGTATATTTACCTTTTTCAATCTTGTTGTTCTTTCTTGATCGGATTTATCGTCTTGAAATTCTCCCTATGCGAGGCAGGGATGAGGTTTAAATTGCCTGACGGTTGGTGTTATGCCGCTTTTGTTTGTCGCAGATCTCTGATATGTAAATAGATTAAATCCAGTTTTCCTTTTTTGTTGCCGATTTGTCAATGCTTGGAATAGGAGTTATTCAATATAAATCGTCTTCTTTACTTATGCACCTACGACCCATCATTCAGATGAGATGCATTCTTCACTTACACGCATTTAAGAAATTGTTCAAGTGAGGTTGCATGTTCTGTAAGATTTTGAAATCAACGGTGCCTTCACTTAAGCCCAGATAAGTTGATGTTGTATTCAATTGTACTGATGAAATTATTTGAGGAACTGGCCCCCTATGATAAGTGCTTGAATTTGTAGATATCATTGATGGACCATGGGAGTATTTCAAGTTACAAATTTCGAATCATTTATCGATATATATAGATTCTTAAAAAGGTTTCATTGTAGGTTTCATTACATTATGTGTGTGTTTTGATGTGATTGATTATTTATCACATGCTTTGTAATTCTTTGCAGGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTATTAGAGGTTTTTTGGTCCAATCATGATTCTAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGGTATACTATAAATTCTAGCTCACGATTTAAACGGAATTAACCTTTGATAATGGTGTTAACTGTTATGTATTCTTTTGTATCAGATCTATCATTTTTACTAATAATGACACTGAAGAATCTAGACTGGCTACTGTCAGCAAAGAAAAAGAGCAACTGAAGTCCAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAAGCTGAACATCAGGTTAATATCATTGATTAGTGTAATCCTTTGAAGCAATTTTCTGGAGAAATTTCAGCTTTTAAGATATCCTGCTTCTTGACACGCAACTCACCTAGAAACGTTACAAGTTAGATAGATTGAGATGTCTCTTGTCTTTGCCTACTTTGTAAGTTGCTACCCTCAGCCCCACTTTTCCTATTTGAAGCTGTAGTAAGATTATGATGTCTTTGGTCCTTTTAGTACTTTATGAATTGCTCCCTCCTAACCCCACTTTTTCCATTTGAAAGATGAAGTGCATTGTAACTTGAGAAATGGATTGCCCCATCTTAAGGGAACTGATTTTTATTTTCGGATCGTTACACTTGCTCCAGACCTTGGTAGCTAAAAAATGGAGTCATTGACATTACATGTCAAAACTCACTCACACTCTACATATTTACACGCAGAAATTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGAAACTTGCCAGAAGAGGAGCTTGAGATGTCCACATTGGCAGCAAATATGAATGGATATGCCGCAGACCTCTGTCCTCCAAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACGTTATCAAAAAAGGATGGCCCATTCTGAGAGAAAAATAAGTTCATCTTCTTGCAAAGTTCTAGCTTGGATAGCAAATCAATTGGTTTTCTTGTTAGGTTGCAGAAGCCCAAATTGTTTGGATCATCGATTGGATTTCGTCCCTCAGCTTCAATTTTGTGTATCTAAAAATTTCATTTTTTGGTTCAAAGCCATCATGTAGATTGATTACTCATTACCAATTGGGAATTTTTCATTCTTTAAACCTTTCGTTTCCTCATCTCGATTCAAGAAACTGAGCTGTATTGTATTTTATCACAATTTCTGATTTAAAGTAACAGGTATTGGAGATTCAGGTTCACTGGGAAAACGTGTTTATATCAAAGATACGTGATTCTAAAGAGGGACAATGAGTAATAGCCTTGAGTCG ATGGCTCTTTTGCAGACCAAAATCTGCCTTCGCATTTCCACAATCATCTTCTTCCTCATCTTTCTGCTGTCTGAGAAATCTTATTGTATCAGAATTCCGAATCGAATCGTAGAACCTATTAAGACTACGTCAAGCCATCAGTCCTTGAAAACGGCAGTTTTCGCTCTAGGAAGTTTCTGGAGATCCGAAGCCGTCTTCGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACGAAACAGAATCCTGAGTATCGTAGCTTGGGGGATCACGCCGAGTCTGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTATTAGAGGTTTTTTGGTCCAATCATGATTCTAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGATCTATCATTTTTACTAATAATGACACTGAAGAATCTAGACTGGCTACTGTCAGCAAAGAAAAAGAGCAACTGAAGTCCAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAAGCTGAACATCAGAAATTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGAAACTTGCCAGAAGAGGAGCTTGAGATGTCCACATTGGCAGCAAATATGAATGGATATGCCGCAGACCTCTGTCCTCCAAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACGTTATCAAAAAAGGATGGCCCATTCTGAGAGAAAAATAAGTTCATCTTCTTGCAAAGTTCTAGCTTGGATAGCAAATCAATTGGTTTTCTTGTTAGGTTGCAGAAGCCCAAATTGTTTGGATCATCGATTGGATTTCGTCCCTCAGCTTCAATTTTGTGTATCTAAAAATTTCATTTTTTGGTTCAAAGCCATCATGTAGATTGATTACTCATTACCAATTGGGAATTTTTCATTCTTTAAACCTTTCGTTTCCTCATCTCGATTCAAGAAACTGAGCTGTATTGTATTTTATCACAATTTCTGATTTAAAGTAACAGGTATTGGAGATTCAGGTTCACTGGGAAAACGTGTTTATATCAAAGATACGTGATTCTAAAGAGGGACAATGAGTAATAGCCTTGAGTCG ATGGCTCTTTTGCAGACCAAAATCTGCCTTCGCATTTCCACAATCATCTTCTTCCTCATCTTTCTGCTGTCTGAGAAATCTTATTGTATCAGAATTCCGAATCGAATCGTAGAACCTATTAAGACTACGTCAAGCCATCAGTCCTTGAAAACGGCAGTTTTCGCTCTAGGAAGTTTCTGGAGATCCGAAGCCGTCTTCGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACGAAACAGAATCCTGAGTATCGTAGCTTGGGGGATCACGCCGAGTCTGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTATTAGAGGTTTTTTGGTCCAATCATGATTCTAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGATCTATCATTTTTACTAATAATGACACTGAAGAATCTAGACTGGCTACTGTCAGCAAAGAAAAAGAGCAACTGAAGTCCAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAAGCTGAACATCAGAAATTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGAAACTTGCCAGAAGAGGAGCTTGAGATGTCCACATTGGCAGCAAATATGAATGGATATGCCGCAGACCTCTGTCCTCCAAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACGTTATCAAAAAAGGATGGCCCATTCTGAGAGAAAAATAA MALLQTKICLRISTIIFFLIFLLSEKSYCIRIPNRIVEPIKTTSSHQSLKTAVFALGSFWRSEAVFGCLDGVVRTTVGYAGGTKQNPEYRSLGDHAESVEYDPKLISFRQLLEVFWSNHDSRQVFGQGPDVGNQYRSIIFTNNDTEESRLATVSKEKEQLKSRGSAVTTQIQELGAFYPAEAEHQKFELKRNPFFLQLMGNLPEEELEMSTLAANMNGYAADLCPPKTQKQIDAKINDVIKKGWPILREK Homology
BLAST of Lsi01G006150 vs. ExPASy Swiss-Prot
Match: Q9SL43 (Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana OX=3702 GN=MSRA5 PE=2 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 3.1e-88 Identity = 158/235 (67.23%), Postives = 196/235 (83.40%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy Swiss-Prot
Match: Q5VPG8 (Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp. japonica OX=39947 GN=MSRA5 PE=2 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.7e-81 Identity = 156/246 (63.41%), Postives = 192/246 (78.05%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy Swiss-Prot
Match: P08761 (Peptide methionine sulfoxide reductase OS=Drosophila melanogaster OX=7227 GN=MsrA PE=1 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 2.1e-31 Identity = 72/173 (41.62%), Postives = 108/173 (62.43%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy Swiss-Prot
Match: Q551H3 (Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum OX=44689 GN=msrA PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy Swiss-Prot
Match: Q6LYY1 (Peptide methionine sulfoxide reductase MsrA OS=Methanococcus maripaludis (strain S2 / LL) OX=267377 GN=msrA PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26 Identity = 66/152 (43.42%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy TrEMBL
Match: A0A0A0KMD5 (Protein-methionine-S-oxide reductase OS=Cucumis sativus OX=3659 GN=Csa_6G505300 PE=3 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 6.9e-131 Identity = 240/252 (95.24%), Postives = 246/252 (97.62%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy TrEMBL
Match: A0A5D3CMK1 (Protein-methionine-S-oxide reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001440 PE=3 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 4.2e-128 Identity = 236/252 (93.65%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy TrEMBL
Match: A0A1S3B2Q7 (Protein-methionine-S-oxide reductase OS=Cucumis melo OX=3656 GN=LOC103485114 PE=3 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 4.2e-128 Identity = 236/252 (93.65%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy TrEMBL
Match: A0A6J1IPP3 (Protein-methionine-S-oxide reductase OS=Cucurbita maxima OX=3661 GN=LOC111478806 PE=3 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 8.5e-121 Identity = 228/252 (90.48%), Postives = 232/252 (92.06%), Query Frame = 0
BLAST of Lsi01G006150 vs. ExPASy TrEMBL
Match: A0A6J1GGV0 (Protein-methionine-S-oxide reductase OS=Cucurbita moschata OX=3662 GN=LOC111453785 PE=3 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 2.7e-119 Identity = 225/252 (89.29%), Postives = 232/252 (92.06%), Query Frame = 0
BLAST of Lsi01G006150 vs. NCBI nr
Match: XP_004134872.1 (peptide methionine sulfoxide reductase A5 [Cucumis sativus] >KGN48901.1 hypothetical protein Csa_003888 [Cucumis sativus]) HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130 Identity = 240/252 (95.24%), Postives = 246/252 (97.62%), Query Frame = 0
BLAST of Lsi01G006150 vs. NCBI nr
Match: XP_038881316.1 (peptide methionine sulfoxide reductase A5 [Benincasa hispida]) HSP 1 Score: 472.2 bits (1214), Expect = 2.7e-129 Identity = 238/252 (94.44%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Lsi01G006150 vs. NCBI nr
Match: XP_008440803.1 (PREDICTED: peptide methionine sulfoxide reductase A5 [Cucumis melo] >KAA0025687.1 peptide methionine sulfoxide reductase A5 [Cucumis melo var. makuwa] >TYK12562.1 peptide methionine sulfoxide reductase A5 [Cucumis melo var. makuwa]) HSP 1 Score: 467.2 bits (1201), Expect = 8.7e-128 Identity = 236/252 (93.65%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of Lsi01G006150 vs. NCBI nr
Match: XP_023544873.1 (peptide methionine sulfoxide reductase A5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 445.7 bits (1145), Expect = 2.7e-121 Identity = 228/252 (90.48%), Postives = 233/252 (92.46%), Query Frame = 0
BLAST of Lsi01G006150 vs. NCBI nr
Match: XP_022979051.1 (peptide methionine sulfoxide reductase A5-like [Cucurbita maxima]) HSP 1 Score: 443.0 bits (1138), Expect = 1.8e-120 Identity = 228/252 (90.48%), Postives = 232/252 (92.06%), Query Frame = 0
BLAST of Lsi01G006150 vs. TAIR 10
Match: AT2G18030.1 (Peptide methionine sulfoxide reductase family protein ) HSP 1 Score: 326.2 bits (835), Expect = 2.2e-89 Identity = 158/235 (67.23%), Postives = 196/235 (83.40%), Query Frame = 0
BLAST of Lsi01G006150 vs. TAIR 10
Match: AT2G18030.2 (Peptide methionine sulfoxide reductase family protein ) HSP 1 Score: 231.5 bits (589), Expect = 7.5e-61 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of Lsi01G006150 vs. TAIR 10
Match: AT5G61640.1 (peptidemethionine sulfoxide reductase 1 ) HSP 1 Score: 96.7 bits (239), Expect = 2.9e-20 Identity = 62/171 (36.26%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of Lsi01G006150 vs. TAIR 10
Match: AT4G25130.1 (peptide met sulfoxide reductase 4 ) HSP 1 Score: 95.5 bits (236), Expect = 6.4e-20 Identity = 57/145 (39.31%), Postives = 76/145 (52.41%), Query Frame = 0
BLAST of Lsi01G006150 vs. TAIR 10
Match: AT5G07460.1 (peptidemethionine sulfoxide reductase 2 ) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18 Identity = 58/145 (40.00%), Postives = 77/145 (53.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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