Lsi01G000940 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G000940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ABC transporter C family member 12-like
Location	chr01: 961051 .. 963801 (-)
RNA-Seq Expression	Lsi01G000940
Synteny	Lsi01G000940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTGTACAGTTTTCAGCACAAATCTTATCATAATATTGTATATGAATTATCTTTTTAGTTTGTATTTACTGATTGGAATTCTTTTGTTTTTAAATGATTTGTGATTCTATGAAATTTATCAATAATTGGTTGGTGATGATGAAGATACTTGTGGCTTTAGTAGTTTACTTTTAAAGTGCATTTTATTTCATTCTCTCGGTAGTGCTTTTAAAGTACATTTCTTTTCATTATTATTATTTTATTTTGAAAATGCTGCTGAACGAATGAAAAGAGACTAATACTCCAAAATATAAAGAAACCAATCCAAAGAAAATTCTGAAAATAGAATAATAAAAGATACAAACAAAAGAGATAGCAACTAAAAAGAAACAATGAAACTCTCCCAATTTCTATTCAGGTCTTGGATGGAGTATCCCTTAAAGCATTTAGATAAAGAATACCATGAAGTAGACTCATAACTTTAAGTACTACAATTATTTATTTATTTATTTATTTTTTCTTTTTCTAATTTTTTTCTTCTTTTTTTAAAAAATCTTTTCCCATGCAGTGCGGATTTCTATATGATCATCATCACAGTTTCTTTCCAGGTTAGTTGGTTTCTTGTGAGAGCATTTATATTTTTATTTACTAAGCTTTCTCTTAAAAAATGCATCCATAAATACCTTGTTTACTGCTTTCATTATGTTTTTCTTCCCCTATCATAAGCTTATAGAACTGTCCATGAAACTATAAATCTTTTGGTGTTAGCTTTGCGAATAATTTAAGTAGTAGGGGTTTGTTCGTAGAAATGCTTGATCTCTAAGCTCTTTATTTATTTATTATTATTATTATTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGTGTTGTTTGATGATTAAGAGGAGCATTGTAGCCAATTGCAGAAACCGCCCTCCGTTTAGAGAGACTTTTTTCGATTATTATTATTATTTTATGTCAGTTTGTGATAGATAAAATCATAAAAGGTCTCATAGCTAAAAGTTAATGGAAAAAAAAAAAGGACACCCTCTGTCCACAAGCCACCATGACTAAAAGAAATTGTTTGACATCCCATCGGTCGAGGCTTACAATTAGCACTTTTGCTTATACCTTATAAAGATTGGCGACAGACTAATGGGTCTAACTCCACAGACTTCTTTTCAATATATATTTGTGTGTTTGTGTGTGTGCGTTTCCCCTGTATTAAGCACATGTGTATTGTTAGTGCAATCACTTGAAGAAAAGTGGTGAGACATTTATGACATGTTGATCATCAAAAAAGAAAAAAAAATGTTTATGAATTTTGATATTTCTGTTTTCTTTTATTCTTTCATAAGCCAATGCAAGTATAAAAGAAAACAGAAATATCAAAATTCATAAACTTTTTTTTTTCTTTTATTATTTCATAAGCCAATGCAAGTAGATGCAACTAAGAGACTTGAGCCTAAACTGGAAAGCCTTTATATTTCCAGCACCTTAGAGATTAGTTTGTTCTTAAAGGATTTTGTGTATTTTTTCCAAACTCATGACTTTTAGTTCTTTTGTCTTTGGCCCATGTATTCGGGTTTCCCCTTTCTTTGGATTGAATTCATATTGGATATTTATTATGTTTGCACTTAGTGTGGAAATGATGAGAGTGCTAAGGAGGTATCAACCTAATTGAGATGTCCGGGTGCATTTCCTGATCCTTAAGATAATTTGATGTTTGTTTCCTATTATATATATTGAGCTTTTGTCTCAATTCATTATATCAATGAAAGAGACTCGTTTCCTTTTAAAAAAAAGTAGATGCAACTCTATTCTTTCGAACAATGGAAGTAGATTTGATTGTATAAAGAAAATCTATGGTCATAATTGTTGAATTAGAATGACACCCTTTAGGTTTTGCATAAAGACGTCACGTCACATTGTTTTTGTTTTGGTATGATATTTCTATTCAGTACATTTTGTTAGACTGAGATGAAAAAGTTCTTCATATATTTAACACAATGATAAAGAAGGTAATCCCTTCCTTGCGAATGAGGACTCACACTTCTGTTCTATTCAAGTCAAGTAAATAGCTATTCTTGTAATGCAGGTGTTATTTGCAGTACTTCTTCTTGTTTATGTCCCTAATTTGGAACCTTATCCTGGTTATATTGCCTTGCCATCTGAGTATGTTGACAACATGGACTATGAAATGCTTCTTGGAGTAGAGCATGTTTGTCCCGAAAGGCATGCTAATTTATTTTCCAGTAAGTAA

mRNA sequence

ATGAATGCGGATTTCTATATGATCATCATCACAGTTTCTTTCCAGGTGTTATTTGCAGTACTTCTTCTTGTTTATGTCCCTAATTTGGAACCTTATCCTGGTTATATTGCCTTGCCATCTGAGTATGTTGACAACATGGACTATGAAATGCTTCTTGGAGTAGAGCATGTTTGTCCCGAAAGGCATGCTAATTTATTTTCCAGTAAGTAA

Coding sequence (CDS)

ATGAATGCGGATTTCTATATGATCATCATCACAGTTTCTTTCCAGGTGTTATTTGCAGTACTTCTTCTTGTTTATGTCCCTAATTTGGAACCTTATCCTGGTTATATTGCCTTGCCATCTGAGTATGTTGACAACATGGACTATGAAATGCTTCTTGGAGTAGAGCATGTTTGTCCCGAAAGGCATGCTAATTTATTTTCCAGTAAGTAA

Protein sequence

MNADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFSSK

Homology

[Close]

BLAST of Lsi01G000940 vs. ExPASy Swiss-Prot
Match: Q9C8H0 (ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-12
Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+ I +   Q LF +LLL+Y+P L+PYPGY  + +E +DN++Y+ L G EH+CPERHA++
Sbjct: 175 YLFISSRCSQALFGILLLIYIPELDPYPGYHIVNNEPLDNVEYDALRGGEHICPERHASI 234

Query: 66  FS 68
           FS
Sbjct: 235 FS 236

[Close]

BLAST of Lsi01G000940 vs. ExPASy Swiss-Prot
Match: Q9C8G9 (ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 8.6e-12
Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+ I  V+ QV F  LL VY PNL+PYPGY  + +E  ++ +YE L G E++CPERHANL
Sbjct: 174 YLYISEVAVQVAFGTLLFVYFPNLDPYPGYTPVGTENSEDYEYEELPGGENICPERHANL 233

Query: 66  FSS 69
           F S
Sbjct: 234 FDS 236

[Close]

BLAST of Lsi01G000940 vs. ExPASy Swiss-Prot
Match: Q42093 (ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-09
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+    V  QVLF +LL +++PNL+ YPGY+ + SE VD+ +YE +   + +CPE+HAN+
Sbjct: 174 YLYTSEVGAQVLFGILLFMHLPNLDTYPGYMPVRSETVDDYEYEEISDGQQICPEKHANI 233

Query: 66  F 67
           F
Sbjct: 234 F 234

[Close]

BLAST of Lsi01G000940 vs. ExPASy Swiss-Prot
Match: Q9C8H1 (ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-08
Identity = 29/62 (46.77%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+ I +   Q LF +LLLVY+P L+ YP Y  L +E +DN++Y+ L G  ++CPER+A++
Sbjct: 175 YLCISSRCCQALFGILLLVYIPELDLYPDYHILNNESLDNVEYDALPGGVNICPERYASI 234

Query: 66  FS 68
           FS
Sbjct: 235 FS 236

[Close]

BLAST of Lsi01G000940 vs. ExPASy TrEMBL
Match: A0A0A0KI94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525370 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-21
Identity = 56/66 (84.85%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 2   NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPER 61
           +AD  MII TVSFQVLFAVLLL YVPNLEPYPGYIAL SE VDNMDYEMLLG EHVCPER
Sbjct: 159 SADLCMIITTVSFQVLFAVLLLAYVPNLEPYPGYIALQSEDVDNMDYEMLLGSEHVCPER 218

Query: 62  HANLFS 68
           HA +FS
Sbjct: 219 HAKIFS 224

[Close]

BLAST of Lsi01G000940 vs. ExPASy TrEMBL
Match: A0A6J1IIR6 (ABC transporter C family member 12-like OS=Cucurbita maxima OX=3661 GN=LOC111477831 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 2   NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPER 61
           +AD  MII T SFQVLFAVLLL YVPNLEPYPGY+ + SEYVDNMDYE L G EHVCPER
Sbjct: 171 SADLCMIITTFSFQVLFAVLLLAYVPNLEPYPGYVVMQSEYVDNMDYETLPGEEHVCPER 230

Query: 62  HANLFS 68
           HANLFS
Sbjct: 231 HANLFS 236

[Close]

BLAST of Lsi01G000940 vs. ExPASy TrEMBL
Match: A0A6J1ED72 (ABC transporter C family member 12-like OS=Cucurbita moschata OX=3662 GN=LOC111433258 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 2   NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPER 61
           +AD  MII T SFQVLFAVLLL YVPNLEPYPGY+ + SEYVDNMDYE L G EHVCPER
Sbjct: 171 SADLCMIITTFSFQVLFAVLLLAYVPNLEPYPGYVVMQSEYVDNMDYETLPGEEHVCPER 230

Query: 62  HANLFS 68
           HANLFS
Sbjct: 231 HANLFS 236

[Close]

BLAST of Lsi01G000940 vs. ExPASy TrEMBL
Match: A0A6J1D047 (LOW QUALITY PROTEIN: ABC transporter C family member 12-like OS=Momordica charantia OX=3673 GN=LOC111015791 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.0e-20
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 7   MIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLF 66
           MII TVSFQVLFAVLLL YVPNLEPYPGY+ + SE +DNMDYEMLLG EHVCPERHAN+F
Sbjct: 176 MIITTVSFQVLFAVLLLAYVPNLEPYPGYVVMQSESLDNMDYEMLLGAEHVCPERHANIF 235

Query: 67  S 68
           S
Sbjct: 236 S 236

[Close]

BLAST of Lsi01G000940 vs. ExPASy TrEMBL
Match: A0A6J1EDU0 (ABC transporter C family member 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433259 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-20
Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 2   NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPER 61
           +AD  +II T SFQVLFAVLLL YVPNLEPYPGY+ + SEYVDNMDYE LLG  HVCPER
Sbjct: 171 SADLCIIITTFSFQVLFAVLLLAYVPNLEPYPGYVVMQSEYVDNMDYETLLGEVHVCPER 230

Query: 62  HANLFS 68
           HAN+FS
Sbjct: 231 HANIFS 236

[Close]

BLAST of Lsi01G000940 vs. NCBI nr
Match: XP_038882170.1 (ABC transporter C family member 12-like isoform X3 [Benincasa hispida])

HSP 1 Score: 120.6 bits (301), Expect = 5.5e-24
Identity = 59/66 (89.39%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 2   NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPER 61
           +AD YMIIITVSFQVLFAVLLL YVPNLEPYPGYIALPSEYVDNMDYEMLLG EHV PER
Sbjct: 171 SADLYMIIITVSFQVLFAVLLLAYVPNLEPYPGYIALPSEYVDNMDYEMLLGAEHVFPER 230

Query: 62  HANLFS 68
           H N+FS
Sbjct: 231 HVNIFS 236

[Close]

BLAST of Lsi01G000940 vs. NCBI nr
Match: XP_038882166.1 (ABC transporter C family member 12-like isoform X1 [Benincasa hispida] >XP_038882167.1 ABC transporter C family member 12-like isoform X1 [Benincasa hispida] >XP_038882168.1 ABC transporter C family member 12-like isoform X1 [Benincasa hispida])

HSP 1 Score: 120.6 bits (301), Expect = 5.5e-24
Identity = 59/66 (89.39%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 2   NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPER 61
           +AD YMIIITVSFQVLFAVLLL YVPNLEPYPGYIALPSEYVDNMDYEMLLG EHV PER
Sbjct: 171 SADLYMIIITVSFQVLFAVLLLAYVPNLEPYPGYIALPSEYVDNMDYEMLLGAEHVFPER 230

Query: 62  HANLFS 68
           H N+FS
Sbjct: 231 HVNIFS 236

[Close]

BLAST of Lsi01G000940 vs. NCBI nr
Match: XP_038882169.1 (ABC transporter C family member 12-like isoform X2 [Benincasa hispida])

HSP 1 Score: 119.8 bits (299), Expect = 9.4e-24
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 3   ADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERH 62
           AD YMIIITVSFQVLFAVLLL YVPNLEPYPGYIALPSEYVDNMDYEMLLG EHV PERH
Sbjct: 62  ADLYMIIITVSFQVLFAVLLLAYVPNLEPYPGYIALPSEYVDNMDYEMLLGAEHVFPERH 121

Query: 63  ANLFS 68
            N+FS
Sbjct: 122 VNIFS 126

[Close]

BLAST of Lsi01G000940 vs. NCBI nr
Match: XP_011658309.2 (ABC transporter C family member 12 isoform X1 [Cucumis sativus] >XP_031742660.1 ABC transporter C family member 12 isoform X1 [Cucumis sativus] >XP_031742661.1 ABC transporter C family member 12 isoform X1 [Cucumis sativus] >KAE8647758.1 hypothetical protein Csa_003753 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-21
Identity = 56/66 (84.85%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 2   NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPER 61
           +AD  MII TVSFQVLFAVLLL YVPNLEPYPGYIAL SE VDNMDYEMLLG EHVCPER
Sbjct: 171 SADLCMIITTVSFQVLFAVLLLAYVPNLEPYPGYIALQSEDVDNMDYEMLLGSEHVCPER 230

Query: 62  HANLFS 68
           HA +FS
Sbjct: 231 HAKIFS 236

[Close]

BLAST of Lsi01G000940 vs. NCBI nr
Match: XP_022977522.1 (ABC transporter C family member 12-like [Cucurbita maxima])

HSP 1 Score: 108.2 bits (269), Expect = 2.8e-20
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 2   NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPER 61
           +AD  MII T SFQVLFAVLLL YVPNLEPYPGY+ + SEYVDNMDYE L G EHVCPER
Sbjct: 171 SADLCMIITTFSFQVLFAVLLLAYVPNLEPYPGYVVMQSEYVDNMDYETLPGEEHVCPER 230

Query: 62  HANLFS 68
           HANLFS
Sbjct: 231 HANLFS 236

[Close]

BLAST of Lsi01G000940 vs. TAIR 10
Match: AT1G30410.1 (multidrug resistance-associated protein 13 )

HSP 1 Score: 73.2 bits (178), Expect = 9.4e-14
Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+ I +   Q LF +LLL+Y+P L+PYPGY  + +E +DN++Y+ L G EH+CPERHA++
Sbjct: 145 YLFISSRCSQALFGILLLIYIPELDPYPGYHIVNNEPLDNVEYDALRGGEHICPERHASI 204

Query: 66  FS 68
           FS
Sbjct: 205 FS 206

[Close]

BLAST of Lsi01G000940 vs. TAIR 10
Match: AT1G30400.1 (multidrug resistance-associated protein 1 )

HSP 1 Score: 70.5 bits (171), Expect = 6.1e-13
Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+ I  V+ QV F  LL VY PNL+PYPGY  + +E  ++ +YE L G E++CPERHANL
Sbjct: 174 YLYISEVAVQVAFGTLLFVYFPNLDPYPGYTPVGTENSEDYEYEELPGGENICPERHANL 233

Query: 66  FSS 69
           F S
Sbjct: 234 FDS 236

[Close]

BLAST of Lsi01G000940 vs. TAIR 10
Match: AT1G30400.2 (multidrug resistance-associated protein 1 )

HSP 1 Score: 70.5 bits (171), Expect = 6.1e-13
Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+ I  V+ QV F  LL VY PNL+PYPGY  + +E  ++ +YE L G E++CPERHANL
Sbjct: 174 YLYISEVAVQVAFGTLLFVYFPNLDPYPGYTPVGTENSEDYEYEELPGGENICPERHANL 233

Query: 66  FSS 69
           F S
Sbjct: 234 FDS 236

[Close]

BLAST of Lsi01G000940 vs. TAIR 10
Match: AT2G34660.1 (multidrug resistance-associated protein 2 )

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-10
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+    V  QVLF +LL +++PNL+ YPGY+ + SE VD+ +YE +   + +CPE+HAN+
Sbjct: 174 YLYTSEVGAQVLFGILLFMHLPNLDTYPGYMPVRSETVDDYEYEEISDGQQICPEKHANI 233

Query: 66  F 67
           F
Sbjct: 234 F 234

[Close]

BLAST of Lsi01G000940 vs. TAIR 10
Match: AT2G34660.2 (multidrug resistance-associated protein 2 )

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-10
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 6   YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANL 65
           Y+    V  QVLF +LL +++PNL+ YPGY+ + SE VD+ +YE +   + +CPE+HAN+
Sbjct: 174 YLYTSEVGAQVLFGILLFMHLPNLDTYPGYMPVRSETVDDYEYEEISDGQQICPEKHANI 233

Query: 66  F 67
           F
Sbjct: 234 F 234

The following BLAST results are available for this feature:

BLAST of Lsi01G000940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8H0	1.3e-12	51.61	ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=...	[more]
Q9C8G9	8.6e-12	53.97	ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 ...	[more]
Q42093	1.8e-09	45.90	ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 ...	[more]
Q9C8H1	1.2e-08	46.77	ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=...	[more]

BLAST of Lsi01G000940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI94	2.1e-21	84.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525370 PE=4 SV=1	[more]
A0A6J1IIR6	1.4e-20	80.30	ABC transporter C family member 12-like OS=Cucurbita maxima OX=3661 GN=LOC111477...	[more]
A0A6J1ED72	1.4e-20	80.30	ABC transporter C family member 12-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1D047	4.0e-20	83.61	LOW QUALITY PROTEIN: ABC transporter C family member 12-like OS=Momordica charan...	[more]
A0A6J1EDU0	6.8e-20	77.27	ABC transporter C family member 12-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]

BLAST of Lsi01G000940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882170.1	5.5e-24	89.39	ABC transporter C family member 12-like isoform X3 [Benincasa hispida]	[more]
XP_038882166.1	5.5e-24	89.39	ABC transporter C family member 12-like isoform X1 [Benincasa hispida] >XP_03888...	[more]
XP_038882169.1	9.4e-24	90.77	ABC transporter C family member 12-like isoform X2 [Benincasa hispida]	[more]
XP_011658309.2	4.4e-21	84.85	ABC transporter C family member 12 isoform X1 [Cucumis sativus] >XP_031742660.1 ...	[more]
XP_022977522.1	2.8e-20	80.30	ABC transporter C family member 12-like [Cucurbita maxima]	[more]

BLAST of Lsi01G000940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30410.1	9.4e-14	51.61	multidrug resistance-associated protein 13	[more]
AT1G30400.1	6.1e-13	53.97	multidrug resistance-associated protein 1	[more]
AT1G30400.2	6.1e-13	53.97	multidrug resistance-associated protein 1	[more]
AT2G34660.1	1.3e-10	45.90	multidrug resistance-associated protein 2	[more]
AT2G34660.2	1.3e-10	45.90	multidrug resistance-associated protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24223:SF379	ABC TRANSPORTER C FAMILY MEMBER 1	coord: 5..66
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 5..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G000940.1	Lsi01G000940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding