Sed0002685 (gene) Chayote v1

Overview
NameSed0002685
Typegene
OrganismSechium edule (Chayote v1)
DescriptionB3 domain-containing protein
LocationLG12: 1594975 .. 1597590 (-)
RNA-Seq ExpressionSed0002685
SyntenySed0002685
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCTTAAAAAAGGTGTGAAATCTAACTTTGAGGATTGAGCTATGAATTTTGTTAGGCGAATTGAATTTCTTGGAATTATCAGCCCATTTCTTTCGTCCCCGAAGAACAAATGAACAGAAGAACGAACGACTGAGGGTTTCACTCTCAGCCTGCTCAGATCCATCACAGGTTACATCTGATTAATCTTCCTTCTTTAATTTTCTCTTCCACATTTTCGGTTCCAATCAACGAATAATCCAGAAAAAAAGTGTAAGAATTATCGAGTAAAATCTGAATCATTAGCGTTCATCATTTGAAGAACTTTTTCTCCCTTCGACTATCAATTTCATTAAATTTCTCCTCTCTCAGCTGTTACATTTGGCTTTAAACAGGATTTTCTTTGTGATTTGTGCTGAAAAAAGTCTCCAAATGCAGTCAGAGGAGAAACCGGCGATGGATCTTGCAACAATGGAGCCGCAAGATAGTGAAATTTTGCCCATATCTGGCAAATCCTTCCATGGTGTTATTCTTTCAAAATCGCATGTCCCTCCCGCATGTATTATGGTAAGTTCTCCATTTCATGGAAATCGATTAGGAATCTGAGAATAGTTTGCGTTAGAAATTAAATTGCATGTGCTTGCATTGTAAAACAAAATTTTATGGTCAATCCTGGAAGTAGTTAGGTATTTTGATGGATCAGCAATAGTTTTGGTATCGTCTTGTAATCGTCGTCTCTTAGGTGTGCGTGTGTTTGGATTCGGTAGAAAAGAGTGGTGTGGAGAAGAGGTGAAGTGTTAATCGTAGTTGCAGTAATTAACTATTTGCTTGGTGTTGGCAATGATTGGGTTAATTAACTGCTCCTTTGAGAATTTGTGTCAATGGCATTTAAGGATTAGAGTTGGTAGTCTTGAGTGATAAGTTTGTTTGATGCAAAGTTTGATGAGCGGTTAAGGATGGTTGTTTACCACCCATTACAAACAAGGGGTTTTGGAAGTGTGGTTGTTTACCACTCTTCTTCTGCCACAAACAAACATACTATGAGAAGCTTGCAAGACTAGACAATGTGGAAACTAGGTACAAAAACAATCTAGTATAAAAAAAATCTAGAATAAGTTTTTGTAAAAGTAGGTTCATAATTACAAATAGCTACTCTAAAAGTGTTCAACTCAGCTGATATGTGTCTAGTTTTGTCCATGATTAAAAGGTCATGAATTCGAATACCCCCACCCTCAATTGTTGTTGGACTAATTAAAGTGTTGTTTTAGTATTTGATCTTTTTAGTAGAATTTATTGGAAGATTATTATTCATCCAAAAACCACGAGCATGGTAACATCAACTTTTAGAGGTCACTCATTCGCAAACTTAAACCAATAGTTTAGATCCCATTTGATAACTTGGTTTTTTGAGATTGAACTTGTTTTCCCCTTTATCTACTATAGTTTTTGTCTCCCAAGTCCCCTTGAAGGGAGCATACCTTCAAAGTCCAAGTTTTCAACCACCGTGCCACCCCTTGGGGACTATAAACAAGTTTTTGAAAGCTACTTTTTTTACATCTAAAATATGAACTTGTTTTTTTAAACATATGTACTAAGTAGTTAAAAAAAAAAAGAAATCCATTTGTGAAAAGTTCTATTCATAGGATTGTTTTTAGTGACAAAAAATAAAAAATCAAACGGGACCTTAGAAAGGAAATGCAGAAAATTGTCTTCAAAACAGCAGTAGTCTCCTGTTCAGAATCACGATTATTTGAACTTGACAGTTCCTAATTCTTAGATAATGCCAAACGCTCAAATTAGGCATTTTGTAGGCATATATATAAATTAGCTTAACTGTGGAAGGACTATCATATCTCCATTTGTAGGTTTTGCCAGTCAAATTTCAATCTGTTTTACCTGCTATCATTATCCCTGCCGTTCTTTACTGCGGCGGAAAGAAATGGAACGTTGATTATTACGGGAATCGACGCAGTAAAACATTCGACATAAGACAGTGGAGGAAGTTTGTTAATGATAATCGTCTCAAGCTCGGAGATGCTTGTGTATTTGAGCTAATGGAATGCTGTAGCACCTCACTCACATTCAGAGTTCAAATTCTCCGAGGCGATATCCCTTTCCAGCTGCACGACAAGTTCAGTGGGGATACTGTAGACACACCTATACTCGTTGACTAGCTGGTGGTCATAGTGTTCAACAGTTTCGAATCCCGACTTCAATCGGACAGCCCGTTTGATCTCTGTAAGCGGATATGTATTTTTGTTCTCCTATCAATACTACCTCTGTCTTAGTTAGGTGGAAGGTCAGGGGAAGAAGCAGGAATCATTTTGGCTGAACTGTGGTTCATAAAGGAGAGGCCAGTCCTCTTGAATTGGCCGAAGTTTGAATCATATAAGTTATCATCCCTGGTATCTGTTTCTTTTATTTTGTGTTCATCTTTGTAAGGGTAAAACCGTAAAAGGTAACCCTGTTTATATTATCTCACATATGTATAAACGAGGAGGCTTTCGAAATTTCATGGCCTTTTCATTTTGTACTCTATTATCTCTCTTTTTATAGGAAACCATCAATGCTTGTTAAAGAACATCTACTTGTAACAACTTTTTTTTTTATATCCGTGAATGTAAGGGTTAGTTTATGG

mRNA sequence

ATTTCTTAAAAAAGGTGTGAAATCTAACTTTGAGGATTGAGCTATGAATTTTGTTAGGCGAATTGAATTTCTTGGAATTATCAGCCCATTTCTTTCGTCCCCGAAGAACAAATGAACAGAAGAACGAACGACTGAGGGTTTCACTCTCAGCCTGCTCAGATCCATCACAGTCAGAGGAGAAACCGGCGATGGATCTTGCAACAATGGAGCCGCAAGATAGTGAAATTTTGCCCATATCTGGCAAATCCTTCCATGGTGTTATTCTTTCAAAATCGCATGTCCCTCCCGCATGTATTATGGTTTTGCCAGTCAAATTTCAATCTGTTTTACCTGCTATCATTATCCCTGCCGTTCTTTACTGCGGCGGAAAGAAATGGAACGTTGATTATTACGGGAATCGACGCAGTAAAACATTCGACATAAGACAGTGGAGGAAGTTTGTTAATGATAATCGTCTCAAGCTCGGAGATGCTTGTGTATTTGAGCTAATGGAATGCTGTAGCACCTCACTCACATTCAGAGTTCAAATTCTCCGAGGCGATATCCCTTTCCAGCTGCACGACAAGTTCAGTGGGGATACTGTAGACACACCTATACTCGTTGACTAGCTGGTGGTCATAGTGTTCAACAGTTTCGAATCCCGACTTCAATCGGACAGCCCGTTTGATCTCTGTAAGCGGATATGTATTTTTGTTCTCCTATCAATACTACCTCTGTCTTAGTTAGGTGGAAGGTCAGGGGAAGAAGCAGGAATCATTTTGGCTGAACTGTGGTTCATAAAGGAGAGGCCAGTCCTCTTGAATTGGCCGAAGTTTGAATCATATAAGTTATCATCCCTGGTATCTGTTTCTTTTATTTTGTGTTCATCTTTGTAAGGGTAAAACCGTAAAAGGTAACCCTGTTTATATTATCTCACATATGTATAAACGAGGAGGCTTTCGAAATTTCATGGCCTTTTCATTTTGTACTCTATTATCTCTCTTTTTATAGGAAACCATCAATGCTTGTTAAAGAACATCTACTTGTAACAACTTTTTTTTTTATATCCGTGAATGTAAGGGTTAGTTTATGG

Coding sequence (CDS)

ATGGATCTTGCAACAATGGAGCCGCAAGATAGTGAAATTTTGCCCATATCTGGCAAATCCTTCCATGGTGTTATTCTTTCAAAATCGCATGTCCCTCCCGCATGTATTATGGTTTTGCCAGTCAAATTTCAATCTGTTTTACCTGCTATCATTATCCCTGCCGTTCTTTACTGCGGCGGAAAGAAATGGAACGTTGATTATTACGGGAATCGACGCAGTAAAACATTCGACATAAGACAGTGGAGGAAGTTTGTTAATGATAATCGTCTCAAGCTCGGAGATGCTTGTGTATTTGAGCTAATGGAATGCTGTAGCACCTCACTCACATTCAGAGTTCAAATTCTCCGAGGCGATATCCCTTTCCAGCTGCACGACAAGTTCAGTGGGGATACTGTAGACACACCTATACTCGTTGACTAG

Protein sequence

MDLATMEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWNVDYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQLHDKFSGDTVDTPILVD
Homology
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BLAST of Sed0002685 vs. NCBI nr
Match: XP_038903804.1 (B3 domain-containing protein Os04g0386900-like [Benincasa hispida] >XP_038903811.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-56
Identity = 103/138 (74.64%), Postives = 116/138 (84.06%), Query Frame = 0 

Query: 2   DLATMEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGK 61
           +L TMEPQD EILP+SGK +H  ILSKSHV P C +VLP KF S+LPAI+IPAVL+C GK
Sbjct: 10  ELPTMEPQDGEILPLSGKPYHAFILSKSHVAPICSLVLPAKFHSILPAIVIPAVLFCQGK 69

Query: 62  KWNVDYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPF 121
           KW +DYYGNRR K  D +QWRKFVNDNRLK GDACVFELMEC S+ L FRVQILRGDIPF
Sbjct: 70  KWTIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIPF 129

Query: 122 QLHDKFSGDTVDTPILVD 140
           QLHDKFSG+T DTPI ++
Sbjct: 130 QLHDKFSGETKDTPIYLE 147

[Close]
BLAST of Sed0002685 vs. NCBI nr
Match: XP_022974195.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974197.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975683.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975684.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975685.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima])

HSP 1 Score: 218.8 bits (556), Expect = 3.0e-53
Identity = 99/134 (73.88%), Postives = 114/134 (85.07%), Query Frame = 0 

Query: 6   MEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWNV 65
           M+PQ+S ILP+SGK +HGVILSKSHV P C M LP KF SVLPAI+IPAVLYC GKKW +
Sbjct: 14  MQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKI 73

Query: 66  DYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQLHD 125
           DYYGNRR K  D +QWRKFVNDN LK GDACVFEL+EC S+ L FRVQILRGDIPF+LH+
Sbjct: 74  DYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRVQILRGDIPFELHE 133

Query: 126 KFSGDTVDTPILVD 140
           KFSG++ +TPIL+D
Sbjct: 134 KFSGESRNTPILID 147

[Close]
BLAST of Sed0002685 vs. NCBI nr
Match: XP_022941967.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_022941973.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata])

HSP 1 Score: 218.0 bits (554), Expect = 5.1e-53
Identity = 98/134 (73.13%), Postives = 114/134 (85.07%), Query Frame = 0 

Query: 6   MEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWNV 65
           M+PQ+S ILP+SGK +HGVILSKSHV P C M LP KF SVLPAI+IPAVLYC GKKW +
Sbjct: 14  MQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKI 73

Query: 66  DYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQLHD 125
           DYYGNRR K  D +QWRKFVNDN LK GDACVFEL+EC S+ + FRVQILRGDIPF+LH+
Sbjct: 74  DYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHE 133

Query: 126 KFSGDTVDTPILVD 140
           KFSG++ +TPIL+D
Sbjct: 134 KFSGESRNTPILID 147

[Close]
BLAST of Sed0002685 vs. NCBI nr
Match: XP_023539026.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG6597214.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028685.1 B3 domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.2 bits (552), Expect = 8.7e-53
Identity = 97/134 (72.39%), Postives = 114/134 (85.07%), Query Frame = 0 

Query: 6   MEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWNV 65
           M+PQ+S ILP+SGK +HGVILSKSHV P C M +P KF SVLPAI+IPAVLYC GKKW +
Sbjct: 14  MQPQNSRILPLSGKPYHGVILSKSHVAPICNMFMPAKFHSVLPAIMIPAVLYCEGKKWKI 73

Query: 66  DYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQLHD 125
           DYYGNRR K  D +QWRKFVNDN LK GDACVFEL+EC S+ + FRVQILRGDIPF+LH+
Sbjct: 74  DYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHE 133

Query: 126 KFSGDTVDTPILVD 140
           KFSG++ +TPIL+D
Sbjct: 134 KFSGESRNTPILID 147

[Close]
BLAST of Sed0002685 vs. NCBI nr
Match: XP_022147119.1 (B3 domain-containing protein Os04g0386900-like [Momordica charantia])

HSP 1 Score: 211.5 bits (537), Expect = 4.8e-51
Identity = 98/135 (72.59%), Postives = 110/135 (81.48%), Query Frame = 0 

Query: 5   TMEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWN 64
           TMEP++ EI P+S K FHGVIL+KSHV P   M LP KF SVLPAI+I  VLYCGGK+W 
Sbjct: 13  TMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVIHGVLYCGGKEWT 72

Query: 65  VDYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQLH 124
           VDYYGNRR K+ D R WRKFVNDN LK GDACVFELMEC S++L FRVQILRGDIP QLH
Sbjct: 73  VDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRVQILRGDIPVQLH 132

Query: 125 DKFSGDTVDTPILVD 140
           DKFSG++ DTPI +D
Sbjct: 133 DKFSGESKDTPIKID 147

[Close]
BLAST of Sed0002685 vs. ExPASy Swiss-Prot
Match: Q7XLP4 (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-18
Identity = 50/130 (38.46%), Postives = 73/130 (56.15%), Query Frame = 0 

Query: 13  ILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWNVDYYGNRR 72
           +LP+ GK +   I+ KSHV P   +V+P  F  +LP+   PA L   G+ W + + G R 
Sbjct: 84  VLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTPATLSWRGRSWGMRFTGGRL 143

Query: 73  SKTFDIRQWRKFVNDNRLKLGDACVFELMECC---STSLTFRVQILRGDIPFQLHDKFSG 132
            +  +   WR F  DN L+LGD CVFEL+         + FRVQ+LR +IP ++  +  G
Sbjct: 144 IQRLE-AGWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEFRVQVLRAEIPARIRGRAGG 203

Query: 133 DTVDTPILVD 140
            T  TPI++D
Sbjct: 204 YTSATPIVID 212

[Close]
BLAST of Sed0002685 vs. ExPASy Swiss-Prot
Match: Q9LHY9 (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-16
Identity = 52/125 (41.60%), Postives = 71/125 (56.80%), Query Frame = 0 

Query: 17  SGKSFHGVILSKSHVPPACIMVLPVKFQSVL--PAIIIPAVLYCGGKKWNVDYYGNRRSK 76
           +G  F   +++KSH+ P   M +P +FQ  L  P     AVL+ GGK W   Y G+ + K
Sbjct: 51  AGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMK 110

Query: 77  TFDIRQWRKFVNDNRLKLGDACVFELMEC-CSTSLTFRVQILRGDIPFQLHDKFSGDTVD 136
             D   W +F  DNRL +GDACVFEL+    +  L F+VQILRG +P ++     G T D
Sbjct: 111 KLD-AGWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTS-KGLTSD 170

Query: 137 TPILV 139
            PIL+
Sbjct: 171 QPILI 173

[Close]
BLAST of Sed0002685 vs. ExPASy Swiss-Prot
Match: Q6AV21 (B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0619800 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.4e-05
Identity = 26/65 (40.00%), Postives = 35/65 (53.85%), Query Frame = 0 

Query: 55  VLYCGGKKWNVDYYGNRR----SKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTF 114
           VL C G  W ++    RR     + F    WRKF +DNRL++GD C+FEL +     LT 
Sbjct: 464 VLQCKGMIWQINLVVRRRYTKGKRWFLTAGWRKFAHDNRLRVGDFCLFELKK--KKKLTM 523

Query: 115 RVQIL 116
            V I+
Sbjct: 524 EVHII 526

[Close]
BLAST of Sed0002685 vs. ExPASy Swiss-Prot
Match: Q8RYD1 (B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.0e-05
Identity = 33/99 (33.33%), Postives = 47/99 (47.47%), Query Frame = 0 

Query: 24  VILSKSHVPPACIMVLPVKFQSVLPAIII--PAVLYCGGKKWNVDY--YGNRRSKTFDIR 83
           V + +SHV   C + +P K+  V   +I     V+     KW + +  +G R S      
Sbjct: 225 VFMKRSHVVSKCFLTIPYKW-CVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGIS-T 284

Query: 84  QWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGD 119
            W+KFV DN L+ GD CVFE     +  L   V I RG+
Sbjct: 285 GWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

[Close]
BLAST of Sed0002685 vs. ExPASy Swiss-Prot
Match: Q2QMT5 (B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0591500 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04
Identity = 26/83 (31.33%), Postives = 48/83 (57.83%), Query Frame = 0 

Query: 24  VILSKSHVPPACIMVLPVKFQS---VLPAIIIPAVLYCGGKKWNVDYYG-NRRSKTFDIR 83
           V+L  +HV    I+++P +F +      +  I  +     +KW+V YY  +  ++ F+  
Sbjct: 229 VVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNRKQKWSVKYYYLSNTTRGFNCH 288

Query: 84  QWRKFVNDNRLKLGDACVFELME 103
           +W KF+ +NRL+ G+ C+FELM+
Sbjct: 289 RWIKFIRENRLREGNVCIFELMK 311

[Close]
BLAST of Sed0002685 vs. ExPASy TrEMBL
Match: A0A6J1IDC2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LOC111472772 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53
Identity = 99/134 (73.88%), Postives = 114/134 (85.07%), Query Frame = 0 

Query: 6   MEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWNV 65
           M+PQ+S ILP+SGK +HGVILSKSHV P C M LP KF SVLPAI+IPAVLYC GKKW +
Sbjct: 14  MQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKI 73

Query: 66  DYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQLHD 125
           DYYGNRR K  D +QWRKFVNDN LK GDACVFEL+EC S+ L FRVQILRGDIPF+LH+
Sbjct: 74  DYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRVQILRGDIPFELHE 133

Query: 126 KFSGDTVDTPILVD 140
           KFSG++ +TPIL+D
Sbjct: 134 KFSGESRNTPILID 147

[Close]
BLAST of Sed0002685 vs. ExPASy TrEMBL
Match: A0A6J1FTK2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=LOC111447171 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53
Identity = 98/134 (73.13%), Postives = 114/134 (85.07%), Query Frame = 0 

Query: 6   MEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWNV 65
           M+PQ+S ILP+SGK +HGVILSKSHV P C M LP KF SVLPAI+IPAVLYC GKKW +
Sbjct: 14  MQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKI 73

Query: 66  DYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQLHD 125
           DYYGNRR K  D +QWRKFVNDN LK GDACVFEL+EC S+ + FRVQILRGDIPF+LH+
Sbjct: 74  DYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHE 133

Query: 126 KFSGDTVDTPILVD 140
           KFSG++ +TPIL+D
Sbjct: 134 KFSGESRNTPILID 147

[Close]
BLAST of Sed0002685 vs. ExPASy TrEMBL
Match: A0A6J1D033 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111016130 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-51
Identity = 98/135 (72.59%), Postives = 110/135 (81.48%), Query Frame = 0 

Query: 5   TMEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKWN 64
           TMEP++ EI P+S K FHGVIL+KSHV P   M LP KF SVLPAI+I  VLYCGGK+W 
Sbjct: 13  TMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVIHGVLYCGGKEWT 72

Query: 65  VDYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQLH 124
           VDYYGNRR K+ D R WRKFVNDN LK GDACVFELMEC S++L FRVQILRGDIP QLH
Sbjct: 73  VDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRVQILRGDIPVQLH 132

Query: 125 DKFSGDTVDTPILVD 140
           DKFSG++ DTPI +D
Sbjct: 133 DKFSGESKDTPIKID 147

[Close]
BLAST of Sed0002685 vs. ExPASy TrEMBL
Match: A0A6J1CYN6 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111015996 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.8e-49
Identity = 94/136 (69.12%), Postives = 108/136 (79.41%), Query Frame = 0 

Query: 4   ATMEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGKKW 63
           A MEP+  EI P+S K FHGVIL KSHV PA +M LP KF SVLPAI+I  V+YCGGK+W
Sbjct: 12  AEMEPRIDEIFPLSNKPFHGVILGKSHVAPAYLMSLPAKFHSVLPAIVIHGVVYCGGKEW 71

Query: 64  NVDYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPFQL 123
            VDYYGNRR +T D R WRKFV++N LK GDACVFELMEC S+ + FRVQILRGDIP QL
Sbjct: 72  RVDYYGNRRGRTLDTRGWRKFVDENHLKYGDACVFELMECSSSMVKFRVQILRGDIPVQL 131

Query: 124 HDKFSGDTVDTPILVD 140
           HDKF G++ DTPI +D
Sbjct: 132 HDKFRGESRDTPINID 147

[Close]
BLAST of Sed0002685 vs. ExPASy TrEMBL
Match: A0A0A0L3V3 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.0e-48
Identity = 92/138 (66.67%), Postives = 109/138 (78.99%), Query Frame = 0 

Query: 2   DLATMEPQDSEILPISGKSFHGVILSKSHVPPACIMVLPVKFQSVLPAIIIPAVLYCGGK 61
           +L TMEPQ+ E +P+SGK +H  ILSKSHV P   +VLP KF S+LPAI+IPAVL C GK
Sbjct: 10  ELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGK 69

Query: 62  KWNVDYYGNRRSKTFDIRQWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGDIPF 121
           KW +DY+GNRR K  D +QWRKFVNDN LK GDA VFEL+EC S+ L FRVQIL GDIP 
Sbjct: 70  KWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRVQILSGDIPL 129

Query: 122 QLHDKFSGDTVDTPILVD 140
           +LHDKFSG+T +TPI +D
Sbjct: 130 ELHDKFSGETKETPIHLD 147

[Close]
BLAST of Sed0002685 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 48.5 bits (114), Expect = 5.0e-06
Identity = 33/99 (33.33%), Postives = 47/99 (47.47%), Query Frame = 0 

Query: 24  VILSKSHVPPACIMVLPVKFQSVLPAIII--PAVLYCGGKKWNVDY--YGNRRSKTFDIR 83
           V + +SHV   C + +P K+  V   +I     V+     KW + +  +G R S      
Sbjct: 225 VFMKRSHVVSKCFLTIPYKW-CVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGIS-T 284

Query: 84  QWRKFVNDNRLKLGDACVFELMECCSTSLTFRVQILRGD 119
            W+KFV DN L+ GD CVFE     +  L   V I RG+
Sbjct: 285 GWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

The following BLAST results are available for this feature:
BLAST of Sed0002685 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903804.16.4e-5674.64B3 domain-containing protein Os04g0386900-like [Benincasa hispida] >XP_038903811... [more]
XP_022974195.13.0e-5373.88B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.... [more]
XP_022941967.15.1e-5373.13B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_02294197... [more]
XP_023539026.18.7e-5372.39B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG... [more]
XP_022147119.14.8e-5172.59B3 domain-containing protein Os04g0386900-like [Momordica charantia][more]
BLAST of Sed0002685 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7XLP44.2e-1838.46B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=399... [more]
Q9LHY91.8e-1641.60B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=399... [more]
Q6AV215.4e-0540.00B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=399... [more]
Q8RYD17.0e-0533.33B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2... [more]
Q2QMT51.2e-0431.33B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=3... [more]
BLAST of Sed0002685 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IDC21.4e-5373.88B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FTK22.5e-5373.13B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1D0332.3e-5172.59B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN... [more]
A0A6J1CYN64.8e-4969.12B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN... [more]
A0A0A0L3V37.0e-4866.67TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 ... [more]
BLAST of Sed0002685 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33280.15.0e-0633.33AP2/B3-like transcriptional factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 34..126
e-value: 7.5E-6
score: 35.4
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 35..121
e-value: 1.9E-11
score: 43.7
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 68..126
score: 11.081608
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 33..124
e-value: 1.53726E-17
score: 70.8197
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 14..126
e-value: 6.2E-18
score: 66.7
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 29..122
NoneNo IPR availablePANTHERPTHR31391:SF64B3 DOMAIN-CONTAINING PROTEIN OS04G0386900coord: 4..138
IPR044837B3 domain-containing protein REM16-likePANTHERPTHR31391B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATEDcoord: 4..138

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0002685.1Sed0002685.1mRNA
Sed0002685.2Sed0002685.2mRNA
Sed0002685.3Sed0002685.3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding