Sed0009408 (gene) Chayote v1

Overview


Name	Sed0009408
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ras-related protein Rab7
Location	LG04: 47464127 .. 47467733 (+)
RNA-Seq Expression	Sed0009408
Synteny	Sed0009408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGATTAAACATTCCACATATAATGTCTCTCCATCATCTTATTTCCCAGACGAGAATCATACAAATTATAATTGTTTTTTTTTTGTTGGAAAGGAAATTATAATTATTTTTAAAACTAAATCAGTATTATTATTATTATTATTTTCTACTAGATTTATTTTTAGTGAAATAAAAGAAGAATGGGGCAAATGAATTGGAAATATTTCATAGTTTTCCATATTTCTCACAGATCATTCCAGCTTGGGTTCGACTTCTGATCGGAGGGAGAGATTCGAAACATCTCTTCTTCAACAATTTCTTTTCTCTCTCTCTCTACAGATTGAATTGATTTCTCTTCCATTACGATGCCTTCTCGAAGAAGAACTTTATTGAAGGTCATAATCCTCGGGGATAGCGGGTGAGAATCCTGTTCCTGCTCTTTTTTTTTTTACCTGAATTTTGATTTTGAGGTTATTGGGTTTTCTTTTCAATACTCGATGGATCGACCCAGATCGTTACTTGCCCGACTTAGGATTTTTTATTTTGTGGGTTTCTGAATTTTCTCGCCTTTGATCTGACTGGTTTTGAGATTCTGTGTAGTTCGATTTTAGATTCTTTGATGGTTTGAGTTTAATGGGTTTTTGTTGCTTTTTTATTTTTTAATTGCCAATAAAAGGTTCTTATTTATTTGTTGAGTGACTTACTTTCTATTTTTTGGCTCTATTGGGCTACTTTATGGAAAAGGGGTTTTTGTATTGTATTGTTGATAGTACTAGAGAAAATTGAAACAAAGGGGGTTTTGTTTTTGAGTTTATTAGGCTGTTGTTTGAAGGTTCTGATGTGGGTAACTAATATGATTGGATCATTTTGTTGTGTTTTAGTTTCTTCCAAATCTACTATGTGGTAATTTGAAGCTTGTCTTTGAATTTTCAGGGTTGGGAAGACCTCTTTGATGAATCAGTATCCTTCTTGGTGTGGTTGAATTAACTATGTTTTAATGCACTATTTTCCATCGAAGACTCGAAGATACCGATTTAAGTTTCTTGTTTTGTAACAATTCTTCTATTTTATAGAGTAACAGTTTCTTGATTCTCTTTGTGGTCTACCTTAACTTTGAAAAACAGATATGTGAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGACTTTTTGACTAAGGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGGTTGGTGATGTGATGGGGGGGAGACTTCAATTTTCCCATAAATATGTTCTTTTTATTAGTACTATACTTAGTTGAATTCCCTTGAATTGGAAGTGATTAAAAAGTGCATTAGCGTTTCACCTCAATCTACTGTGTGGTGGTTTAGACTTGCACTATCTGAAAATCAACTATGTAATTTCCTTATTCTTGGTCAATTATAGCGGTTCACCTTAATGGGTAGGTCTCGTGGTGAAAGGACCTTGGAGATTTAAATAGGTTATGAGTTCAATCAATGATAGAAACCTAACCTTGTAGGATAAGGTGGTTTGTCACATAAGTATAGCGAGGTGTGCTTAAGCTGATCCAAACATTCATAGATATAAAATAAAATGTTTATAGGAAAAATGTCATGAACTCAATCAATGCATCTGGGAAGATGCAAATTTCTTGGGTTATCTTTTGAATAGGATGAATGTTTTATTCAATAGTTTATAATTAGCTAGACCTGGGCCATGGAAACTGGCTGCTGCATCCTCTCTCGCAGGGGACTCAGTTGAACCTTGAGAACCCATTTAGTGACATCCCATTCCTATCTTTCACTGACATCCCTTTGCCTGGTACCTATGGCCTAAAGGTTTAATGTAAACCCATGAAGCCAACGAGCAACTAAGAGACTCGGTTTATCCCATTACCTAATGGCTAGAAACATAAAATTTTCCTTTATTCCTTGCAGATATGGGATACAGCAGGCCAAGAACGATTCCAAAGTCTTGGAGTAGCTTTTTACAGAGGTGCTGATTGTTGCGTTCTGGTGTATGATGTGAATTCAATGAAATCATTTGACAACCTTAATAACTGGCGGGAAGAATTTCTTATCCAGGTTCTTTCATCTGTGTTTATGAATTATCTTGTTACCAGAAAGCCATTTAAATACGACTTCTTTTGACGCTTTCGCATAACCATCTGCAGGCAAGCCCTTCGGATCCGGAAAATTTCCCCTTCGTTGTTTTAGGAAACAAAGTTGATGTTGATGGTGGAAACAGTAGAGTTGTAAGTATTGCCTAGATTTTTATATGTATAATTTCCTCTTTCTGTCTTCAGAAGATAGTAGATTGAAATGTTCTGTTTTTCTGAATACTATAGGTTTCAGAGAAAAAGGCACGAGCTTGGTGTGCATCAAAAGGAAATATACCGTACTTTGAAACTTCTGCCAAAGAAGGCATTAACGTAGAAGAAGCTTTCCAATGCATTGCAAAAAATGCCCTCAAGAGCGGGGAAGAGGATGAGATGTAAGTTCTTATGCTAAACAATCACTATTTATTTTTAATAATTAGGAATTAGTGCTTTCTCCACTACATATCCAGAGTACCCGTGCCTGTCCCAAAGCTTGAACCTGATTGACAAGGAGGAATTTTATAATTAAGCTCTTTTGTGGGTTTCAAACTTGAGATCTCTAAGAGAGCATACTTTAAAATATGAAGCACCTATTAGCTAAATTATCTTCTTTTTTTTCGAAAGGAGAGGACAAATTTTTAATTGAGAATGTGAAAATAGAAAATGCAGAGACAATGAAAACAAAAAAATATAGAGTGTTAGCTACATAACATGAAGTTCACCGAGCAATAAAATCTCAATGTCCTTTTGTGTGGCAACAACTCGAGTTGATATAGGTGTCAGGGTGGGGAAATTTATCTACTGTTTTCTTCTTCTTTTTTTGCTTCACACTGAAGGCCGATCCTGAGTCCATCCTATACCCTATGGCAAACAAAATGATGAGTTATGTAGTTTAGATCTAGCAACAGAATTGGACCTAGCAACTGAGGCCGAGGCTATAGATATGTAGAATCTATTTCTTCCTAAATGGTTGCGTTTTCTAATTCTTTTAAAAATTAATTATAACTCCATTGTTTCTATCTTCTTTCTATCATCAATGCTTCATTGGTTTCTACTTCTGCCTATTAACTCTCAGTTTCATTGAACCTTTGTTGATTGATGATTGCCATGGTATTGCTTGCAGATACTTACCCGACACTATCGATGTTGCGAGCAACAATCAGCCAAGATCATCTGGATGTGACTGCTAAGTTCAATACACTGAACCTTATTTTATTCTCTCGTAAAACACAAGTCTTCTATAAAGTTCTTACAGACTCGGGCTTCTTATGCGTTTCTATTTGTAAATTTGGCTTTGCATTTGAACGAGTCCTGTCATTATCAGTCATTATCAGTTTAGTTGTGTTTGGTCTATTCAAATTGTGTTTATTGTCTTAGCAGTCATTGTTCCTGACTCTGCCTTGGTCTTATTTGTTGATGATATAAGTTTGTCGCATAAGTTTATGTCATTCTTTTTAGTGAACATTTTTGTGAATCTTGTTCTTTGATAGGATTTTGGTTCTTATTTTATGGTATTGGTTCTTGTTTCA

mRNA sequence

AAAAGATTAAACATTCCACATATAATGTCTCTCCATCATCTTATTTCCCAGACGAGAATCATACAAATTATAATTGTTTTTTTTTTGTTGGAAAGGAAATTATAATTATTTTTAAAACTAAATCAGTATTATTATTATTATTATTTTCTACTAGATTTATTTTTAGTGAAATAAAAGAAGAATGGGGCAAATGAATTGGAAATATTTCATAGTTTTCCATATTTCTCACAGATCATTCCAGCTTGGGTTCGACTTCTGATCGGAGGGAGAGATTCGAAACATCTCTTCTTCAACAATTTCTTTTCTCTCTCTCTCTACAGATTGAATTGATTTCTCTTCCATTACGATGCCTTCTCGAAGAAGAACTTTATTGAAGGTCATAATCCTCGGGGATAGCGGGGTTGGGAAGACCTCTTTGATGAATCAATATGTGAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGACTTTTTGACTAAGGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGATATGGGATACAGCAGGCCAAGAACGATTCCAAAGTCTTGGAGTAGCTTTTTACAGAGGTGCTGATTGTTGCGTTCTGGTGTATGATGTGAATTCAATGAAATCATTTGACAACCTTAATAACTGGCGGGAAGAATTTCTTATCCAGGCAAGCCCTTCGGATCCGGAAAATTTCCCCTTCGTTGTTTTAGGAAACAAAGTTGATGTTGATGGTGGAAACAGTAGAGTTGTTTCAGAGAAAAAGGCACGAGCTTGGTGTGCATCAAAAGGAAATATACCGTACTTTGAAACTTCTGCCAAAGAAGGCATTAACGTAGAAGAAGCTTTCCAATGCATTGCAAAAAATGCCCTCAAGAGCGGGGAAGAGGATGAGATATACTTACCCGACACTATCGATGTTGCGAGCAACAATCAGCCAAGATCATCTGGATGTGACTGCTAAGTTCAATACACTGAACCTTATTTTATTCTCTCGTAAAACACAAGTCTTCTATAAAGTTCTTACAGACTCGGGCTTCTTATGCGTTTCTATTTGTAAATTTGGCTTTGCATTTGAACGAGTCCTGTCATTATCAGTCATTATCAGTTTAGTTGTGTTTGGTCTATTCAAATTGTGTTTATTGTCTTAGCAGTCATTGTTCCTGACTCTGCCTTGGTCTTATTTGTTGATGATATAAGTTTGTCGCATAAGTTTATGTCATTCTTTTTAGTGAACATTTTTGTGAATCTTGTTCTTTGATAGGATTTTGGTTCTTATTTTATGGTATTGGTTCTTGTTTCA

Coding sequence (CDS)

ATGCCTTCTCGAAGAAGAACTTTATTGAAGGTCATAATCCTCGGGGATAGCGGGGTTGGGAAGACCTCTTTGATGAATCAATATGTGAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGACTTTTTGACTAAGGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGATATGGGATACAGCAGGCCAAGAACGATTCCAAAGTCTTGGAGTAGCTTTTTACAGAGGTGCTGATTGTTGCGTTCTGGTGTATGATGTGAATTCAATGAAATCATTTGACAACCTTAATAACTGGCGGGAAGAATTTCTTATCCAGGCAAGCCCTTCGGATCCGGAAAATTTCCCCTTCGTTGTTTTAGGAAACAAAGTTGATGTTGATGGTGGAAACAGTAGAGTTGTTTCAGAGAAAAAGGCACGAGCTTGGTGTGCATCAAAAGGAAATATACCGTACTTTGAAACTTCTGCCAAAGAAGGCATTAACGTAGAAGAAGCTTTCCAATGCATTGCAAAAAATGCCCTCAAGAGCGGGGAAGAGGATGAGATATACTTACCCGACACTATCGATGTTGCGAGCAACAATCAGCCAAGATCATCTGGATGTGACTGCTAA

Protein sequence

MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEDEIYLPDTIDVASNNQPRSSGCDC

Homology

[Close]

BLAST of Sed0009408 vs. NCBI nr
Match: NP_001269169.1 (ras-related protein Rab-7b [Cucumis sativus] >XP_008447038.1 PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab7-like [Cucumis melo] >XP_022136134.1 ras-related protein Rab7 [Momordica charantia] >XP_031744185.1 ras-related protein Rab-7b isoform X1 [Cucumis sativus] >XP_031744186.1 ras-related protein Rab-7b isoform X1 [Cucumis sativus] >TYK22620.1 ras-related protein Rab7 [Cucumis melo var. makuwa] >AAQ72787.1 putative GTP-binding protein [Cucumis sativus] >KGN44346.1 hypothetical protein Csa_016435 [Cucumis sativus])

HSP 1 Score: 421.0 bits (1081), Expect = 5.9e-114
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDV SNNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206

[Close]

BLAST of Sed0009408 vs. NCBI nr
Match: XP_038888926.1 (ras-related protein Rab7 [Benincasa hispida])

HSP 1 Score: 419.5 bits (1077), Expect = 1.7e-113
Identity = 203/206 (98.54%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDV SNNQPRSSGC+C
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCEC 206

[Close]

BLAST of Sed0009408 vs. NCBI nr
Match: XP_022952328.1 (ras-related protein Rab7 [Cucurbita moschata] >XP_022972496.1 ras-related protein Rab7 [Cucurbita maxima] >XP_023553958.1 ras-related protein Rab7 [Cucurbita pepo subsp. pepo] >KAG6572030.1 hypothetical protein SDJN03_28758, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011699.1 hypothetical protein SDJN02_26605 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.1 bits (1076), Expect = 2.2e-113
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF+CIAKNALKSG
Sbjct: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDVA NNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206

[Close]

BLAST of Sed0009408 vs. NCBI nr
Match: XP_038692113.1 (ras-related protein Rab7 [Tripterygium wilfordii])

HSP 1 Score: 418.7 bits (1075), Expect = 2.9e-113
Identity = 202/206 (98.06%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDVA+NNQPRS+GC+C
Sbjct: 181 EEEEIYLPDTIDVATNNQPRSTGCEC 206

[Close]

BLAST of Sed0009408 vs. NCBI nr
Match: KAF3435691.1 (hypothetical protein FNV43_RR22783 [Rhamnella rubrinervis])

HSP 1 Score: 417.9 bits (1073), Expect = 5.0e-113
Identity = 200/206 (97.09%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VV+GNK+DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEG+NVEEAFQCIAKNALKSG
Sbjct: 121 VVIGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGVNVEEAFQCIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EEDEIYLPDTIDVA+N+QPRSSGC+C
Sbjct: 181 EEDEIYLPDTIDVATNSQPRSSGCEC 206

[Close]

BLAST of Sed0009408 vs. ExPASy Swiss-Prot
Match: P31022 (Ras-related protein Rab7 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 6.3e-111
Identity = 190/206 (92.23%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS+KSFDNLNNWREEFLIQA+PSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VV+GNK+D+DGGNSRVVSEKKARAWCA+KGNIPYFETSAKEGINVEEAFQ IAK+ALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+E+YLPDTIDV +++QPRS+GC+C
Sbjct: 181 EEEELYLPDTIDVGNSSQPRSTGCEC 206

[Close]

BLAST of Sed0009408 vs. ExPASy Swiss-Prot
Match: Q9LS94 (Ras-related protein RABG3f OS=Arabidopsis thaliana OX=3702 GN=RABG3F PE=1 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 9.1e-110
Identity = 190/206 (92.23%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           V++GNKVDVD GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAFQCIAK+ALKSG
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+E+YLPDTIDV ++NQ RS+GC+C
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206

[Close]

BLAST of Sed0009408 vs. ExPASy Swiss-Prot
Match: Q9XI98 (Ras-related protein RABG3e OS=Arabidopsis thaliana OX=3702 GN=RABG3E PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 3.6e-106
Identity = 183/206 (88.83%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VV+GNK+DVDGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSG
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+E+YLPDTIDV ++N  RS+GC+C
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206

[Close]

BLAST of Sed0009408 vs. ExPASy Swiss-Prot
Match: Q40787 (Ras-related protein Rab7 OS=Cenchrus ciliaris OX=35872 PE=2 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.0e-105
Identity = 185/205 (90.24%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           V+LGNKVDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE+AFQCI KNALK+ 
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNE 180

Query: 181 EEDEIYLPDTIDVASNNQ-PRSSGC 205
            E+E+Y+PDT+DV   N+  RSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQRSSGC 205

[Close]

BLAST of Sed0009408 vs. ExPASy Swiss-Prot
Match: O24461 (Ras-related protein Rab7 OS=Prunus armeniaca OX=36596 PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.2e-105
Identity = 185/207 (89.37%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQA+PSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NV++AFQCIAKNAL + 
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNE 180

Query: 181 EEDEIYLPDTIDVA-SNNQPRSSGCDC 207
            E+EIYLPDTIDVA    Q RSSGC+C
Sbjct: 181 PEEEIYLPDTIDVAGGGRQQRSSGCEC 207

[Close]

BLAST of Sed0009408 vs. ExPASy TrEMBL
Match: Q6UNT4 (Putative GTP-binding protein OS=Cucumis sativus OX=3659 GN=Rab7b PE=2 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.8e-114
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDV SNNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206

[Close]

BLAST of Sed0009408 vs. ExPASy TrEMBL
Match: A0A5D3DGZ7 (Ras-related protein Rab7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00470 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.8e-114
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDV SNNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206

[Close]

BLAST of Sed0009408 vs. ExPASy TrEMBL
Match: A0A6J1C3F7 (ras-related protein Rab7 OS=Momordica charantia OX=3673 GN=LOC111007902 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.8e-114
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDV SNNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206

[Close]

BLAST of Sed0009408 vs. ExPASy TrEMBL
Match: A0A1S3BGG2 (LOW QUALITY PROTEIN: ras-related protein Rab7-like OS=Cucumis melo OX=3656 GN=LOC103489588 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.8e-114
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDV SNNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206

[Close]

BLAST of Sed0009408 vs. ExPASy TrEMBL
Match: A0A6J1I650 (ras-related protein Rab7 OS=Cucurbita maxima OX=3661 GN=LOC111471043 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF+CIAKNALKSG
Sbjct: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+EIYLPDTIDVA NNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206

[Close]

BLAST of Sed0009408 vs. TAIR 10
Match: AT3G18820.1 (RAB GTPase homolog G3F )

HSP 1 Score: 397.5 bits (1020), Expect = 6.5e-111
Identity = 190/206 (92.23%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           V++GNKVDVD GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAFQCIAK+ALKSG
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+E+YLPDTIDV ++NQ RS+GC+C
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206

[Close]

BLAST of Sed0009408 vs. TAIR 10
Match: AT1G49300.1 (RAB GTPase homolog G3E )

HSP 1 Score: 385.6 bits (989), Expect = 2.5e-107
Identity = 183/206 (88.83%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VV+GNK+DVDGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSG
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+E+YLPDTIDV ++N  RS+GC+C
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206

[Close]

BLAST of Sed0009408 vs. TAIR 10
Match: AT1G49300.2 (RAB GTPase homolog G3E )

HSP 1 Score: 385.6 bits (989), Expect = 2.5e-107
Identity = 183/206 (88.83%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VV+GNK+DVDGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSG
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
           EE+E+YLPDTIDV ++N  RS+GC+C
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206

[Close]

BLAST of Sed0009408 vs. TAIR 10
Match: AT1G52280.1 (RAB GTPase homolog G3D )

HSP 1 Score: 372.9 bits (956), Expect = 1.7e-103
Identity = 178/206 (86.41%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1   MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNK DVDGG SRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AF+CI KNA K+ 
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
            E+E YLPDTIDVA   Q RS+GC+C
Sbjct: 181 PEEEPYLPDTIDVAGGQQQRSTGCEC 206

[Close]

BLAST of Sed0009408 vs. TAIR 10
Match: AT3G16100.1 (RAB GTPase homolog G3C )

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-102
Identity = 175/206 (84.95%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1   MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLV DVN MKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
           VVLGNK DVDGG SRVV+EKKA++WCASKGNIPYFETSAK+G+NV+ AF+CIAKNALK+ 
Sbjct: 121 VVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNE 180

Query: 181 EEDEIYLPDTIDVASNNQPRSSGCDC 207
            E+E+YLPDTIDVA   Q RS+GC+C
Sbjct: 181 PEEEVYLPDTIDVAGARQQRSTGCEC 206

The following BLAST results are available for this feature:

BLAST of Sed0009408 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001269169.1	5.9e-114	99.03	ras-related protein Rab-7b [Cucumis sativus] >XP_008447038.1 PREDICTED: LOW QUAL...	[more]
XP_038888926.1	1.7e-113	98.54	ras-related protein Rab7 [Benincasa hispida]	[more]
XP_022952328.1	2.2e-113	98.06	ras-related protein Rab7 [Cucurbita moschata] >XP_022972496.1 ras-related protei...	[more]
XP_038692113.1	2.9e-113	98.06	ras-related protein Rab7 [Tripterygium wilfordii]	[more]
KAF3435691.1	5.0e-113	97.09	hypothetical protein FNV43_RR22783 [Rhamnella rubrinervis]	[more]

BLAST of Sed0009408 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31022	6.3e-111	92.23	Ras-related protein Rab7 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9LS94	9.1e-110	92.23	Ras-related protein RABG3f OS=Arabidopsis thaliana OX=3702 GN=RABG3F PE=1 SV=1	[more]
Q9XI98	3.6e-106	88.83	Ras-related protein RABG3e OS=Arabidopsis thaliana OX=3702 GN=RABG3E PE=2 SV=1	[more]
Q40787	3.0e-105	90.24	Ras-related protein Rab7 OS=Cenchrus ciliaris OX=35872 PE=2 SV=1	[more]
O24461	5.2e-105	89.37	Ras-related protein Rab7 OS=Prunus armeniaca OX=36596 PE=2 SV=1	[more]

BLAST of Sed0009408 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q6UNT4	2.8e-114	99.03	Putative GTP-binding protein OS=Cucumis sativus OX=3659 GN=Rab7b PE=2 SV=1	[more]
A0A5D3DGZ7	2.8e-114	99.03	Ras-related protein Rab7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1C3F7	2.8e-114	99.03	ras-related protein Rab7 OS=Momordica charantia OX=3673 GN=LOC111007902 PE=4 SV=...	[more]
A0A1S3BGG2	2.8e-114	99.03	LOW QUALITY PROTEIN: ras-related protein Rab7-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1I650	1.1e-113	98.06	ras-related protein Rab7 OS=Cucurbita maxima OX=3661 GN=LOC111471043 PE=4 SV=1	[more]

BLAST of Sed0009408 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18820.1	6.5e-111	92.23	RAB GTPase homolog G3F	[more]
AT1G49300.1	2.5e-107	88.83	RAB GTPase homolog G3E	[more]
AT1G49300.2	2.5e-107	88.83	RAB GTPase homolog G3E	[more]
AT1G52280.1	1.7e-103	86.41	RAB GTPase homolog G3D	[more]
AT3G16100.1	1.1e-102	84.95	RAB GTPase homolog G3C	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 9..30 score: 44.25 coord: 116..129 score: 40.9 coord: 154..176 score: 43.22 coord: 32..48 score: 35.89 coord: 50..72 score: 47.03
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..179 e-value: 5.6E-95 score: 331.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..179 e-value: 1.0E-26 score: 104.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..206 e-value: 9.4E-6 score: 32.3
None	No IPR available	PANTHER	PTHR47981	RAB FAMILY	coord: 1..206
None	No IPR available	PANTHER	PTHR47981:SF4	RAS-RELATED PROTEIN RABG3F	coord: 1..206
None	No IPR available	PROSITE	PS51419	RAB	coord: 3..206 score: 32.671841
None	No IPR available	PROSITE	PS51420	RHO	coord: 2..180 score: 10.130865
None	No IPR available	CDD	cd01862	Rab7	coord: 9..182 e-value: 1.38053E-134 score: 372.382
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..179 e-value: 2.3E-13 score: 50.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..177 e-value: 1.4E-56 score: 190.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 3..206 score: 17.428669
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..172 e-value: 1.7E-26 score: 90.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..188 e-value: 2.9E-69 score: 234.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009408.1	Sed0009408.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding