Lcy11g017940 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g017940
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Nuclear ribonuclease Z
Location	Chr11: 44036374 .. 44038845 (+)
RNA-Seq Expression	Lcy11g017940
Synteny	Lcy11g017940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACGAAGAAGGGAATGCAAATTGAAGGATACCCAATTAAGGGTTTGTCCATTGGAGGCCACGAAACTTGCGTCATTTTCCCAACCCTTAATTTGGCCTTTGATATCGGTCGCTGCCCCCAAAAGGCTATAGGCCAGAACTTCCTCTTCATCTCCCATGGTCATATGGATCACATTGTAAGTGCAACTCCCTCCTCATTGCCTCAGTTTTCAACTTTTTCATTATCGTCCAAGCTTGTTCCCATGGCGGGAGACCTCATGGTCCATACGCTATAGATGCAATTACATGTGCTGAGAAGTCGAAGTGCAATTATATGTGGATTAGGGTTTAGGAATTGAATTCAAGTAATTACATGTGCATGTCCTGCAGCTATTTTCAATTCAAGTGTTTATTTGAGTTTTGAATCTAGTTTTACCTACCCACCTATAAAATTCAAATTGACCATCGATCACAGTTCGATTGTAAGCATTTTTTCGCGTTTTGTTCTTCTGCGCGGTTTATCAGTCGCTTTTGTGCTTAATAGGGGGGACTTCCGTTGTATGTTGCTACGCGTGGATTGTACAAAATGGAACCGCCAACAATCATTGTACCAAAATCTATAAAGAATGATGTAGAAAATCTCTTAGAGGTGCACCGAAGATTGGATCAATCTGAGCTGAGATGTAATTTGATTGGCTTGGAAGTGGGTAGTGTCCCTTTCTGAATCATCTTATTTCGTCCAATGAATAATTTGGTCTCTTTTTATCCAATTTTCGTGTTACAGTTTAATACATTCTTCCGTTCATATATTTTGTTTTCAGGAGAAGAGTTGTCATTGAGAAGGGACCTCAAAGTGAGGGCTTTTAAGACATACCATGTTATTGACAGCCAGGTAATCCTGTTTGTTGCTCACATACTTTGGTGAATTTGTTCTTCTTTGATGTCCAAAATTGCATCTAACTGCTACACAATAACTGTGGCAGGGTTATCTACTTTACTCTGTGAAACAGAAGCTTAAGAAAGAGTACTTGGGACTATCTGGCAACGAGATCAAGAAACTACGGCTATCTGGTGTGGAGGTCTGTCTTGACTCTCAGATTCATAGATTTCTTGGAACACATCCATTTTGAAAACCCCCCCTTTTATTTATTTATTTATTTTGAACACTCCGTCATTGCAAAAGTATATAGTGGCTTCCCTGGCCGAACAATTTATCTAGAATTTTGTGAGATTTATTACAGGTGGGTGGCCTAAAGAGTTTGAACATACGAACATTTGGTTGAATTCAGGGCCTTCTCCACTATATTCAAGCCTTAATTTCAAACTTTTTATTTCTTGGTTAAAGTTAACAGAGTTTGACATTTTCCTCTGATTATTATTTTCTTTTATGTGTTTCCCCAATCTTTAAAATTCTCCTCAAGTACATAACTATCTTGGTTATTTTGCTTTGTGACAGATTACTTACACAATTACTGAACCTGAAGTGGCATTTACAGGAGATACAACGTCTGACTTTATAGTTGATGAAAATAATATTGACGTATTGAGGGCAAAGATCCTAGTTATGGAGGTCTGGTACTTAAAGACTACGCATTTCATTGTTGGTTAGCTTTTTAAATATAAGTAGAGTTTTGCACAGTGGAATCACACATAGCAGATGGAAACATAATATATACTTATGGAAGCGTTCTAACACTGAAATAAAAGTTGATTCGTAAAAAAAAATAAAAAACACTGAAATAAAAGTTAGCATTATATATAATGGCCAACTTCTTGTGGATATGGGGCTTTTGCATGTTTATGGATTGATATCAGCTTAAACAGTAAACTCGGAGGTTGAGATTGGACAAAACAATGGTGTTTGTTATCATTTTGGGAGGGTAGGTTCCATTGAGGTTTATTCCTTCATGTTGGATAACCATTCTTCTTTTGCAGAGCACATTTCTTGAAAACAGAGTTACTGTGGAGCATGCAAGAGAATACGGACACACTCACTTGTTCGAGGTTCGTTCACTCAACATTGTAACACCAGCTATTGCTGTGTTCATTAAGCAACTTGTATCTCATAATTTTATTTTACAGCCTTATGTTCTTCTTATGTTGATGATCCTTCTCCAGATAATAAACCTTGCGGAGAAGTTCAAGAACAAAGCGATTCTTCTGATTCACTTCTCAGCTCGCTACACTAGGGAGGTACTTTGATGCCAATTTGTTCACTTTTCAGTTCATCGTGTGTTTTATTTAGTTTTCTGGTACAATCCTTGTATCTGATGACATCCTCTCTTCCCACTTCCATCTTTTAGAGAGGATTTAAGAGACTAACAAGTCCCAAGTTGCTTTTCTAGTGTTTATTTTTACGTTTGTAAGGGACTAAAGCTAGATACATTTTCTGCTTTTTGGTTAATCAGGAAATTCAGCAAGCCGTAGCCGCTTTACCTCCACCTTTAGCAGGCCGAGTTTCTGCGCTAACGGAAGGTTTTTGAGGTGGA

mRNA sequence

ATGGAAACGAAGAAGGGAATGCAAATTGAAGGATACCCAATTAAGGGTTTGTCCATTGGAGGCCACGAAACTTGCGTCATTTTCCCAACCCTTAATTTGGCCTTTGATATCGGTCGCTGCCCCCAAAAGGCTATAGGCCAGAACTTCCTCTTCATCTCCCATGGTCATATGGATCACATTGGGGGACTTCCGTTGTATGTTGCTACGCGTGGATTGTACAAAATGGAACCGCCAACAATCATTGTACCAAAATCTATAAAGAATGATGTAGAAAATCTCTTAGAGGTGCACCGAAGATTGGATCAATCTGAGCTGAGATGTAATTTGATTGGCTTGGAAGTGGGAGAAGAGTTGTCATTGAGAAGGGACCTCAAAGTGAGGGCTTTTAAGACATACCATGTTATTGACAGCCAGGGTTATCTACTTTACTCTGTGAAACAGAAGCTTAAGAAAGAGTACTTGGGACTATCTGGCAACGAGATCAAGAAACTACGGCTATCTGGTGTGGAGATTACTTACACAATTACTGAACCTGAAGTGGCATTTACAGGAGATACAACGTCTGACTTTATAGTTGATGAAAATAATATTGACGTATTGAGGGCAAAGATCCTAGTTATGGAGGTCTGGTACTTAAAGACTACGCATTTCATTGTTGGTTAGCTTTTTAAATATAAGTAGAGTTTTGCACAGTGGAATCACACATAGCAGATGGAAACATAATATATACTTATGGAAGCGTTCTAACACTGAAATAAAAGTTGATTCGTAAAAAAAAATAAAAAACACTGAAATAAAAGTTAGCATTATATATAATGGCCAACTTCTTGTGGATATGGGGCTTTTGCATGTTTATGGATTGATATCAGCTTAAACAGTAAACTCGGAGGTTGAGATTGGACAAAACAATGGTGTTTGTTATCATTTTGGGAGGGTAGGTTCCATTGAGGTTTATTCCTTCATGTTGGATAACCATTCTTCTTTTGCAGAGCACATTTCTTGAAAACAGAGTTACTGTGGAGCATGCAAGAGAATACGGACACACTCACTTGTTCGAGATAATAAACCTTGCGGAGAAGTTCAAGAACAAAGCGATTCTTCTGATTCACTTCTCAGCTCGCTACACTAGGGAGGTACTTTGATGCCAATTTGTTCACTTTTCAGTTCATCGTGTGTTTTATTTAGTTTTCTGGTACAATCCTTGTATCTGATGACATCCTCTCTTCCCACTTCCATCTTTTAGAGAGGATTTAAGAGACTAACAAGTCCCAAGTTGCTTTTCTAGTGTTTATTTTTACGTTTGTAAGGGACTAAAGCTAGATACATTTTCTGCTTTTTGGTTAATCAGGAAATTCAGCAAGCCGTAGCCGCTTTACCTCCACCTTTAGCAGGCCGAGTTTCTGCGCTAACGGAAGGTTTTTGAGGTGGA

Coding sequence (CDS)

ATGGAAACGAAGAAGGGAATGCAAATTGAAGGATACCCAATTAAGGGTTTGTCCATTGGAGGCCACGAAACTTGCGTCATTTTCCCAACCCTTAATTTGGCCTTTGATATCGGTCGCTGCCCCCAAAAGGCTATAGGCCAGAACTTCCTCTTCATCTCCCATGGTCATATGGATCACATTGGGGGACTTCCGTTGTATGTTGCTACGCGTGGATTGTACAAAATGGAACCGCCAACAATCATTGTACCAAAATCTATAAAGAATGATGTAGAAAATCTCTTAGAGGTGCACCGAAGATTGGATCAATCTGAGCTGAGATGTAATTTGATTGGCTTGGAAGTGGGAGAAGAGTTGTCATTGAGAAGGGACCTCAAAGTGAGGGCTTTTAAGACATACCATGTTATTGACAGCCAGGGTTATCTACTTTACTCTGTGAAACAGAAGCTTAAGAAAGAGTACTTGGGACTATCTGGCAACGAGATCAAGAAACTACGGCTATCTGGTGTGGAGATTACTTACACAATTACTGAACCTGAAGTGGCATTTACAGGAGATACAACGTCTGACTTTATAGTTGATGAAAATAATATTGACGTATTGAGGGCAAAGATCCTAGTTATGGAGGTCTGGTACTTAAAGACTACGCATTTCATTGTTGGTTAG

Protein sequence

METKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMEVWYLKTTHFIVG

Homology

[Close]

BLAST of Lcy11g017940 vs. ExPASy Swiss-Prot
Match: Q8LGU7 (tRNase Z TRZ1 OS=Arabidopsis thaliana OX=3702 GN=TRZ1 PE=1 SV=3)

HSP 1 Score: 336.7 bits (862), Expect = 2.0e-91
Identity = 158/212 (74.53%), Postives = 186/212 (87.74%), Query Frame = 0


Query: 1   METKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI 60
           ME KK MQIEGYPI+GLSIGGHETC+IFP+L +AFDIGRCP +AI Q+FLFISH HMDHI
Sbjct: 1   MEKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60

Query: 61  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 120
           GGLP+YVATRGLYKM+PPTIIVP SIK  VE+L EVHR+LD SEL+ NL+GL++GEE  +
Sbjct: 61  GGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFII 120

Query: 121 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEV 180
           R+DLKV+AFKT+HVI SQGY++YS K KLKKEY+GLSGNEIK L++SGVEIT +I  PEV
Sbjct: 121 RKDLKVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEV 180

Query: 181 AFTGDTTSDFIVDENNIDVLRAKILVMEVWYL 213
           AFTGDTTSDF+VDE N D L+AK+LVME  +L
Sbjct: 181 AFTGDTTSDFVVDETNADALKAKVLVMESTFL 212

[Close]

BLAST of Lcy11g017940 vs. ExPASy Swiss-Prot
Match: Q8L633 (tRNase Z TRZ2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRZ2 PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-72
Identity = 126/209 (60.29%), Postives = 161/209 (77.03%), Query Frame = 0


Query: 4   KKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIGGL 63
           +KG+++E Y I+G+S+GGHETCVI P L   FDIGRCP +AI Q FLFI+H H+DHIGGL
Sbjct: 73  RKGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGL 132

Query: 64  PLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRD 123
           P+YVA+RGLY +EPP I VP SIK DVE LLE+HR + Q EL   LI L VGE   LR D
Sbjct: 133 PMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRND 192

Query: 124 LKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEVAFT 183
           + VR F T+HVI SQGY++YSV++KL+K+Y  L G +I+K++ SGVEIT TI  PE+AFT
Sbjct: 193 IVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDTILSPEIAFT 252

Query: 184 GDTTSDFIVDENNIDVLRAKILVMEVWYL 213
           GDTTS++++D  N D LRAK+L+ E  +L
Sbjct: 253 GDTTSEYMLDPRNADALRAKVLITEATFL 281

[Close]

BLAST of Lcy11g017940 vs. ExPASy Swiss-Prot
Match: P60193 (Nuclear ribonuclease Z (Fragment) OS=Triticum aestivum OX=4565 GN=ELAC PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-72
Identity = 123/175 (70.29%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 2   ETKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIG 61
           + K  ++IEGYP++G+SIGGHETCVIFPTL+LAFDIGRCPQ+A+ Q+FLFISH H+DHIG
Sbjct: 2   KAKPRLEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVAQDFLFISHAHLDHIG 61

Query: 62  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLR 121
           GLP+YVATRGLY++ PPTI VPK ++  VE L +VHR +DQSEL   L+ L++GEE  LR
Sbjct: 62  GLPMYVATRGLYRLRPPTIFVPKYLRELVERLFDVHRAMDQSELNHTLVPLDIGEEYELR 121

Query: 122 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTIT 177
           RDLKVRAFKTYH I SQGY++YSVKQKLK++YLGL G+EIK+L+LSGVEIT T+T
Sbjct: 122 RDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVT 176

[Close]

BLAST of Lcy11g017940 vs. ExPASy Swiss-Prot
Match: B0R7E2 (Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) OX=478009 GN=rnz PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 38/116 (32.76%), Postives = 54/116 (46.55%), Query Frame = 0


Query: 35  FDIGRCPQK-------AIGQNFLFISHGHMDHIGGLPLYVATRGLY-KMEPPTIIVPKSI 94
           FD G   Q+         G + +FI+HGH DH+ GLP  V T     + +P TI VP+ +
Sbjct: 35  FDAGEATQRQMMRYKTGFGVSDVFITHGHGDHVFGLPGLVHTWDFNDRTDPLTIHVPRGL 94

Query: 95  KNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRDLKVRAFKTYHVIDSQGYLL 143
           + D+E+L  V            +     G  +    D +VRAF+T H   S GY L
Sbjct: 95  RGDIEDL--VFSAGGDVGYPVRITEATPGAVVRSHDDYEVRAFETAHSTASVGYAL 148

[Close]

BLAST of Lcy11g017940 vs. ExPASy Swiss-Prot
Match: Q9HN60 (Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnz PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 38/116 (32.76%), Postives = 54/116 (46.55%), Query Frame = 0


Query: 35  FDIGRCPQK-------AIGQNFLFISHGHMDHIGGLPLYVATRGLY-KMEPPTIIVPKSI 94
           FD G   Q+         G + +FI+HGH DH+ GLP  V T     + +P TI VP+ +
Sbjct: 35  FDAGEATQRQMMRYKTGFGVSDVFITHGHGDHVFGLPGLVHTWDFNDRTDPLTIHVPRGL 94

Query: 95  KNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRDLKVRAFKTYHVIDSQGYLL 143
           + D+E+L  V            +     G  +    D +VRAF+T H   S GY L
Sbjct: 95  RGDIEDL--VFSAGGDVGYPVRITEATPGAVVRSHDDYEVRAFETAHSTASVGYAL 148

[Close]

BLAST of Lcy11g017940 vs. ExPASy TrEMBL
Match: A0A6J1IPL7 (tRNase Z TRZ1 OS=Cucurbita maxima OX=3661 GN=LOC111478792 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.3e-109
Identity = 199/212 (93.87%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 2   ETKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIG 61
           E  KGMQIEGYPIKGLSIGGHETC+IFPTLNLAFDIGRCPQKAI QNFL ISHGHMDHIG
Sbjct: 18  ERMKGMQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQKAISQNFLLISHGHMDHIG 77

Query: 62  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLR 121
           GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEE SLR
Sbjct: 78  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEEFSLR 137

Query: 122 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEVA 181
           RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGL GNEIKKLRLSGVE+TYTIT+PEVA
Sbjct: 138 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLPGNEIKKLRLSGVEVTYTITDPEVA 197

Query: 182 FTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           FTGDTTSDFIVDENNIDVLRAKILVME  +L+
Sbjct: 198 FTGDTTSDFIVDENNIDVLRAKILVMESTFLE 229

[Close]

BLAST of Lcy11g017940 vs. ExPASy TrEMBL
Match: A0A6J1GGV3 (tRNase Z TRZ1 OS=Cucurbita moschata OX=3662 GN=LOC111453818 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.3e-109
Identity = 199/212 (93.87%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 2   ETKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIG 61
           E  KGMQIEGYPIKGLSIGGHETC+IFPTLNLAFDIGRCPQKAI QNFL ISHGHMDHIG
Sbjct: 18  ERTKGMQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQKAISQNFLLISHGHMDHIG 77

Query: 62  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLR 121
           GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEE SLR
Sbjct: 78  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEEFSLR 137

Query: 122 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEVA 181
           RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGL GNEIKKLRLSGVE+TYTIT+PEVA
Sbjct: 138 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLPGNEIKKLRLSGVEVTYTITDPEVA 197

Query: 182 FTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           FTGDTTSDFIVDENNIDVLRAKILVME  +L+
Sbjct: 198 FTGDTTSDFIVDENNIDVLRAKILVMESTFLE 229

[Close]

BLAST of Lcy11g017940 vs. ExPASy TrEMBL
Match: A0A0A0L1I3 (Lactamase_B domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G228360 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.9e-109
Identity = 199/213 (93.43%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   METKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI 60
           ME  KG+QIEGYPIKGLSIGGHETC+IFPTLNLAFDIGRCPQKAI Q+FLFISHGHMDHI
Sbjct: 18  MEMSKGIQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQKAISQDFLFISHGHMDHI 77

Query: 61  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 120
           GGLPLYVATRGLYKM PPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL
Sbjct: 78  GGLPLYVATRGLYKMGPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 137

Query: 121 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEV 180
           RRDLKVR F+TYHVIDSQGYLLYSVKQKLKK+YLGLSGNEIKKLRLSGVEITYTITEPEV
Sbjct: 138 RRDLKVRVFRTYHVIDSQGYLLYSVKQKLKKDYLGLSGNEIKKLRLSGVEITYTITEPEV 197

Query: 181 AFTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           AFTGDTTSDFIVDENNIDVLRAKILVME  +L+
Sbjct: 198 AFTGDTTSDFIVDENNIDVLRAKILVMESTFLE 230

[Close]

BLAST of Lcy11g017940 vs. ExPASy TrEMBL
Match: A0A6J1BWD5 (tRNase Z TRZ1 OS=Momordica charantia OX=3673 GN=LOC111005940 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.8e-109
Identity = 198/213 (92.96%), Postives = 205/213 (96.24%), Query Frame = 0


Query: 1   METKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI 60
           ME KKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI
Sbjct: 17  MEAKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI 76

Query: 61  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 120
           GGLPLYVATRGLY MEPPTII+PKSIK DVENLLEVHRRLD SELRCNLIGL+VGEELSL
Sbjct: 77  GGLPLYVATRGLYNMEPPTIILPKSIKTDVENLLEVHRRLDHSELRCNLIGLDVGEELSL 136

Query: 121 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEV 180
           RRDLK RAFKTYHVI SQGYL+YSVKQKLKKEYLGLSGNEIKKLRLSGVE+TYTI+EPEV
Sbjct: 137 RRDLKARAFKTYHVIQSQGYLVYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTYTISEPEV 196

Query: 181 AFTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           AFTGDTTSDFIVDENNIDVLRAKILVME  +L+
Sbjct: 197 AFTGDTTSDFIVDENNIDVLRAKILVMESTFLE 229

[Close]

BLAST of Lcy11g017940 vs. ExPASy TrEMBL
Match: A0A1S3C5G3 (nuclear ribonuclease Z OS=Cucumis melo OX=3656 GN=LOC103497261 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.6e-109
Identity = 198/213 (92.96%), Postives = 205/213 (96.24%), Query Frame = 0


Query: 1   METKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI 60
           ME  KG+QI GYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAI Q+FLFISHGHMDHI
Sbjct: 18  MEMSKGIQIAGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAISQDFLFISHGHMDHI 77

Query: 61  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 120
           GGLPLYVATRGLYKM PPTI+VPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL
Sbjct: 78  GGLPLYVATRGLYKMRPPTIVVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 137

Query: 121 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEV 180
           RRDLKVR F+TYHVIDSQGYLLYSVKQKLKK+YLGLSGNEIKKLRLSGVEITYTITEPEV
Sbjct: 138 RRDLKVRVFRTYHVIDSQGYLLYSVKQKLKKDYLGLSGNEIKKLRLSGVEITYTITEPEV 197

Query: 181 AFTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           AFTGDTTSDFIVDENNIDVLRAKILVME  +L+
Sbjct: 198 AFTGDTTSDFIVDENNIDVLRAKILVMESTFLE 230

[Close]

BLAST of Lcy11g017940 vs. NCBI nr
Match: XP_038882012.1 (tRNase Z TRZ1 isoform X1 [Benincasa hispida])

HSP 1 Score: 407.1 bits (1045), Expect = 9.4e-110
Identity = 201/213 (94.37%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   METKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI 60
           ME+ KGMQIEGYPIKGLSIGGHETCVIFPTL+LAFDIGRCPQKAI Q+FLFISHGHMDHI
Sbjct: 43  MESCKGMQIEGYPIKGLSIGGHETCVIFPTLSLAFDIGRCPQKAISQDFLFISHGHMDHI 102

Query: 61  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 120
           GGLPLYVATRGLYKM+PPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL
Sbjct: 103 GGLPLYVATRGLYKMKPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 162

Query: 121 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEV 180
           RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSG EITYTITEPEV
Sbjct: 163 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGAEITYTITEPEV 222

Query: 181 AFTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           AFTGDTTSDFIVDENNID+LRAKILVME  +L+
Sbjct: 223 AFTGDTTSDFIVDENNIDILRAKILVMESTFLE 255

[Close]

BLAST of Lcy11g017940 vs. NCBI nr
Match: XP_038882013.1 (tRNase Z TRZ1 isoform X2 [Benincasa hispida])

HSP 1 Score: 407.1 bits (1045), Expect = 9.4e-110
Identity = 201/213 (94.37%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   METKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI 60
           ME+ KGMQIEGYPIKGLSIGGHETCVIFPTL+LAFDIGRCPQKAI Q+FLFISHGHMDHI
Sbjct: 17  MESCKGMQIEGYPIKGLSIGGHETCVIFPTLSLAFDIGRCPQKAISQDFLFISHGHMDHI 76

Query: 61  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 120
           GGLPLYVATRGLYKM+PPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL
Sbjct: 77  GGLPLYVATRGLYKMKPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 136

Query: 121 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEV 180
           RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSG EITYTITEPEV
Sbjct: 137 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGAEITYTITEPEV 196

Query: 181 AFTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           AFTGDTTSDFIVDENNID+LRAKILVME  +L+
Sbjct: 197 AFTGDTTSDFIVDENNIDILRAKILVMESTFLE 229

[Close]

BLAST of Lcy11g017940 vs. NCBI nr
Match: XP_022950835.1 (tRNase Z TRZ1 [Cucurbita moschata])

HSP 1 Score: 404.8 bits (1039), Expect = 4.7e-109
Identity = 199/212 (93.87%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 2   ETKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIG 61
           E  KGMQIEGYPIKGLSIGGHETC+IFPTLNLAFDIGRCPQKAI QNFL ISHGHMDHIG
Sbjct: 18  ERTKGMQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQKAISQNFLLISHGHMDHIG 77

Query: 62  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLR 121
           GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEE SLR
Sbjct: 78  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEEFSLR 137

Query: 122 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEVA 181
           RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGL GNEIKKLRLSGVE+TYTIT+PEVA
Sbjct: 138 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLPGNEIKKLRLSGVEVTYTITDPEVA 197

Query: 182 FTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           FTGDTTSDFIVDENNIDVLRAKILVME  +L+
Sbjct: 198 FTGDTTSDFIVDENNIDVLRAKILVMESTFLE 229

[Close]

BLAST of Lcy11g017940 vs. NCBI nr
Match: XP_022979026.1 (tRNase Z TRZ1 [Cucurbita maxima])

HSP 1 Score: 404.8 bits (1039), Expect = 4.7e-109
Identity = 199/212 (93.87%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 2   ETKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIG 61
           E  KGMQIEGYPIKGLSIGGHETC+IFPTLNLAFDIGRCPQKAI QNFL ISHGHMDHIG
Sbjct: 18  ERMKGMQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQKAISQNFLLISHGHMDHIG 77

Query: 62  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLR 121
           GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEE SLR
Sbjct: 78  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEEFSLR 137

Query: 122 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEVA 181
           RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGL GNEIKKLRLSGVE+TYTIT+PEVA
Sbjct: 138 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLPGNEIKKLRLSGVEVTYTITDPEVA 197

Query: 182 FTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           FTGDTTSDFIVDENNIDVLRAKILVME  +L+
Sbjct: 198 FTGDTTSDFIVDENNIDVLRAKILVMESTFLE 229

[Close]

BLAST of Lcy11g017940 vs. NCBI nr
Match: KAG6604210.1 (tRNase Z TRZ1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404.8 bits (1039), Expect = 4.7e-109
Identity = 199/212 (93.87%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 2   ETKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIG 61
           E  KGMQIEGYPIKGLSIGGHETC+IFPTLNLAFDIGRCPQKAI QNFL ISHGHMDHIG
Sbjct: 18  ERTKGMQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQKAISQNFLLISHGHMDHIG 77

Query: 62  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLR 121
           GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEE SLR
Sbjct: 78  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEEFSLR 137

Query: 122 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEVA 181
           RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGL GNEIKKLRLSGVE+TYTIT+PEVA
Sbjct: 138 RDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLPGNEIKKLRLSGVEVTYTITDPEVA 197

Query: 182 FTGDTTSDFIVDENNIDVLRAKILVMEVWYLK 214
           FTGDTTSDFIVDENNIDVLRAKILVME  +L+
Sbjct: 198 FTGDTTSDFIVDENNIDVLRAKILVMESTFLE 229

[Close]

BLAST of Lcy11g017940 vs. TAIR 10
Match: AT1G74700.1 (tRNAse Z1 )

HSP 1 Score: 336.7 bits (862), Expect = 1.5e-92
Identity = 158/212 (74.53%), Postives = 186/212 (87.74%), Query Frame = 0


Query: 1   METKKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHI 60
           ME KK MQIEGYPI+GLSIGGHETC+IFP+L +AFDIGRCP +AI Q+FLFISH HMDHI
Sbjct: 1   MEKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60

Query: 61  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 120
           GGLP+YVATRGLYKM+PPTIIVP SIK  VE+L EVHR+LD SEL+ NL+GL++GEE  +
Sbjct: 61  GGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFII 120

Query: 121 RRDLKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEV 180
           R+DLKV+AFKT+HVI SQGY++YS K KLKKEY+GLSGNEIK L++SGVEIT +I  PEV
Sbjct: 121 RKDLKVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEV 180

Query: 181 AFTGDTTSDFIVDENNIDVLRAKILVMEVWYL 213
           AFTGDTTSDF+VDE N D L+AK+LVME  +L
Sbjct: 181 AFTGDTTSDFVVDETNADALKAKVLVMESTFL 212

[Close]

BLAST of Lcy11g017940 vs. TAIR 10
Match: AT2G04530.1 (Metallo-hydrolase/oxidoreductase superfamily protein )

HSP 1 Score: 273.1 bits (697), Expect = 2.0e-73
Identity = 126/209 (60.29%), Postives = 161/209 (77.03%), Query Frame = 0


Query: 4   KKGMQIEGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQKAIGQNFLFISHGHMDHIGGL 63
           +KG+++E Y I+G+S+GGHETCVI P L   FDIGRCP +AI Q FLFI+H H+DHIGGL
Sbjct: 73  RKGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGL 132

Query: 64  PLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRD 123
           P+YVA+RGLY +EPP I VP SIK DVE LLE+HR + Q EL   LI L VGE   LR D
Sbjct: 133 PMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRND 192

Query: 124 LKVRAFKTYHVIDSQGYLLYSVKQKLKKEYLGLSGNEIKKLRLSGVEITYTITEPEVAFT 183
           + VR F T+HVI SQGY++YSV++KL+K+Y  L G +I+K++ SGVEIT TI  PE+AFT
Sbjct: 193 IVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDTILSPEIAFT 252

Query: 184 GDTTSDFIVDENNIDVLRAKILVMEVWYL 213
           GDTTS++++D  N D LRAK+L+ E  +L
Sbjct: 253 GDTTSEYMLDPRNADALRAKVLITEATFL 281

The following BLAST results are available for this feature:

BLAST of Lcy11g017940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGU7	2.0e-91	74.53	tRNase Z TRZ1 OS=Arabidopsis thaliana OX=3702 GN=TRZ1 PE=1 SV=3	[more]
Q8L633	2.8e-72	60.29	tRNase Z TRZ2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRZ2 PE=2 SV=1	[more]
P60193	8.1e-72	70.29	Nuclear ribonuclease Z (Fragment) OS=Triticum aestivum OX=4565 GN=ELAC PE=1 SV=1	[more]
B0R7E2	2.6e-06	32.76	Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) OX=...	[more]
Q9HN60	2.6e-06	32.76	Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-...	[more]

BLAST of Lcy11g017940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPL7	2.3e-109	93.87	tRNase Z TRZ1 OS=Cucurbita maxima OX=3661 GN=LOC111478792 PE=4 SV=1	[more]
A0A6J1GGV3	2.3e-109	93.87	tRNase Z TRZ1 OS=Cucurbita moschata OX=3662 GN=LOC111453818 PE=4 SV=1	[more]
A0A0A0L1I3	2.9e-109	93.43	Lactamase_B domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G228360...	[more]
A0A6J1BWD5	3.8e-109	92.96	tRNase Z TRZ1 OS=Momordica charantia OX=3673 GN=LOC111005940 PE=4 SV=1	[more]
A0A1S3C5G3	8.6e-109	92.96	nuclear ribonuclease Z OS=Cucumis melo OX=3656 GN=LOC103497261 PE=4 SV=1	[more]

BLAST of Lcy11g017940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882012.1	9.4e-110	94.37	tRNase Z TRZ1 isoform X1 [Benincasa hispida]	[more]
XP_038882013.1	9.4e-110	94.37	tRNase Z TRZ1 isoform X2 [Benincasa hispida]	[more]
XP_022950835.1	4.7e-109	93.87	tRNase Z TRZ1 [Cucurbita moschata]	[more]
XP_022979026.1	4.7e-109	93.87	tRNase Z TRZ1 [Cucurbita maxima]	[more]
KAG6604210.1	4.7e-109	93.87	tRNase Z TRZ1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy11g017940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74700.1	1.5e-92	74.53	tRNAse Z1	[more]
AT2G04530.1	2.0e-73	60.29	Metallo-hydrolase/oxidoreductase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	GENE3D	3.60.15.10		coord: 13..216 e-value: 4.3E-31 score: 110.1
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 26..214
None	No IPR available	PANTHER	PTHR46504	FAMILY NOT NAMED	coord: 3..214
None	No IPR available	CDD	cd16272	RNaseZ_MBL-fold	coord: 17..208 e-value: 1.67699E-28 score: 103.882

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g017940.1	Lcy11g017940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034414	tRNA 3'-trailer cleavage, endonucleolytic
molecular_function	GO:0042781	3'-tRNA processing endoribonuclease activity