Lcy11g012320 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g012320
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr11: 16110314 .. 16110994 (-)
RNA-Seq ExpressionLcy11g012320
SyntenyLcy11g012320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAACTTAAAAAATAGAGGAATCAACAATAGTTCAGTATGCCCTTGTTGCTCTAATTATAATGAATCTACTGACCATGCCCTATTTCGATGCCAGCGAGCTTATGATTTATGGAAGATTACCTTCAATCAGGTGTTTTTGGAGACCAAATTCAACAAGAGCTTTGTGGATAGATGGGAAAAGATCTGCGCCAATTGCTTCGCAGGAGAGTTAGGGCTTGTGGCGGTCACCTGCTGGGCGATCTGGATCGACAGAAATAAACTCACTCATGAAGAAGTTATACCCCTAATTGAGAACAGAAGTCAATGGATCAATGAGTACCTTTCGAAATTTTTGGAGGTCAATGAGAGACACTCTTTGTCCAGATCAAGGAGAAATCGTTCTGATCCTTCATCTTCAGCTGTGCGTTGGTCTCCTCCTTCTAATGGTCTCTGGAAAATCAATGTGGACGCTGCATGGTCCTCTTCCCCTTCATCCACGGGTTTTGGAGCTATCAACAGGAACTCGAATGGAGATGTTGAGGGAGTGTCTATGAGATTTTGTGACCTTGCGTTCGAAGCCCCCGAAGCTAAAGTAAGAGCTATTAGGGAAGGCATCATTTTGGGCCTAAATTTCGGCCATAGGAAAATTATTGTGGAGTCAGATTGTGAATTAGCAATTAAATTCAGGACCAAATAA

mRNA sequence

ATGATCAACTTAAAAAATAGAGGAATCAACAATAGTTCAGTATGCCCTTGTTGCTCTAATTATAATGAATCTACTGACCATGCCCTATTTCGATGCCAGCGAGCTTATGATTTATGGAAGATTACCTTCAATCAGGTGTTTTTGGAGACCAAATTCAACAAGAGCTTTGTGGATAGATGGGAAAAGATCTGCGCCAATTGCTTCGCAGGAGAGTTAGGGCTTGTGGCGGTCACCTGCTGGGCGATCTGGATCGACAGAAATAAACTCACTCATGAAGAAGTTATACCCCTAATTGAGAACAGAAGTCAATGGATCAATGAGTACCTTTCGAAATTTTTGGAGGTCAATGAGAGACACTCTTTGTCCAGATCAAGGAGAAATCGTTCTGATCCTTCATCTTCAGCTGTGCGTTGGTCTCCTCCTTCTAATGGTCTCTGGAAAATCAATGTGGACGCTGCATGGTCCTCTTCCCCTTCATCCACGGGTTTTGGAGCTATCAACAGGAACTCGAATGGAGATGTTGAGGGAGTGTCTATGAGATTTTGTGACCTTGCGTTCGAAGCCCCCGAAGCTAAAGTAAGAGCTATTAGGGAAGGCATCATTTTGGGCCTAAATTTCGGCCATAGGAAAATTATTGTGGAGTCAGATTGTGAATTAGCAATTAAATTCAGGACCAAATAA

Coding sequence (CDS)

ATGATCAACTTAAAAAATAGAGGAATCAACAATAGTTCAGTATGCCCTTGTTGCTCTAATTATAATGAATCTACTGACCATGCCCTATTTCGATGCCAGCGAGCTTATGATTTATGGAAGATTACCTTCAATCAGGTGTTTTTGGAGACCAAATTCAACAAGAGCTTTGTGGATAGATGGGAAAAGATCTGCGCCAATTGCTTCGCAGGAGAGTTAGGGCTTGTGGCGGTCACCTGCTGGGCGATCTGGATCGACAGAAATAAACTCACTCATGAAGAAGTTATACCCCTAATTGAGAACAGAAGTCAATGGATCAATGAGTACCTTTCGAAATTTTTGGAGGTCAATGAGAGACACTCTTTGTCCAGATCAAGGAGAAATCGTTCTGATCCTTCATCTTCAGCTGTGCGTTGGTCTCCTCCTTCTAATGGTCTCTGGAAAATCAATGTGGACGCTGCATGGTCCTCTTCCCCTTCATCCACGGGTTTTGGAGCTATCAACAGGAACTCGAATGGAGATGTTGAGGGAGTGTCTATGAGATTTTGTGACCTTGCGTTCGAAGCCCCCGAAGCTAAAGTAAGAGCTATTAGGGAAGGCATCATTTTGGGCCTAAATTTCGGCCATAGGAAAATTATTGTGGAGTCAGATTGTGAATTAGCAATTAAATTCAGGACCAAATAA

Protein sequence

MINLKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWKITFNQVFLETKFNKSFVDRWEKICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSLSRSRRNRSDPSSSAVRWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEGVSMRFCDLAFEAPEAKVRAIREGIILGLNFGHRKIIVESDCELAIKFRTK
Homology
BLAST of Lcy11g012320 vs. ExPASy TrEMBL
Match: A0A2N9H1N4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.8e-20
Identity = 75/224 (33.48%), Postives = 116/224 (51.79%), Query Frame = 0

Query: 3    NLKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWK-ITFNQVFLETKFNKSFVDRWE 62
            NL +R I +   C  CS   EST HAL++C++   +WK I++ Q   E+ +   F+D   
Sbjct: 1281 NLHHRHILDDPRCTICSKQLESTIHALWQCKKVQSVWKSISWGQQLAESTYT-DFIDLLH 1340

Query: 63   KICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSL 122
            K  +     EL L ++ CW+IW  RN+L  ++ +       Q   + +S+F E  +    
Sbjct: 1341 KCFSLLSTSELQLFSMICWSIWYRRNRLRLQQSVDNDLQLVQRARDSMSEFQEAQD---- 1400

Query: 123  SRSRRNRSDPSSSA-VRWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEG-VSM 182
             R ++    PSSSA V+W+PP+ G +K+N D A  S  ++ G G I RN  G+V G +S 
Sbjct: 1401 -REQQLPQQPSSSATVKWNPPAQGRYKVNYDGAIFSDSNAAGIGVIIRNHQGEVMGSLSQ 1460

Query: 183  RF-CDLAFEAPEAKVRAIREGIILGLNFGHRKIIVESDCELAIK 223
            RF    + EA EA   A R  I    + G  KI +E D +  ++
Sbjct: 1461 RFPFPHSVEAVEAS--AARSAIQFARDLGFTKIDLEGDSKTVVE 1496

BLAST of Lcy11g012320 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 7.6e-20
Identity = 67/177 (37.85%), Postives = 87/177 (49.15%), Query Frame = 0

Query: 1   MINLKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWKITFNQVFLETKFNKSFVDRW 60
           M NL  RGI+ +  C  C    E+TDHALF+C+RA ++W I   Q F +  FN S  D  
Sbjct: 14  MRNLIKRGIDPNPNCLVCGKQIETTDHALFKCKRAKEVWNILLPQAFPQCDFNNSVQDGL 73

Query: 61  EKICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHS 120
             +  +    +  LV V  WAIW DRN +  +  IP  + RS WI  Y+  F +V +  S
Sbjct: 74  LYLVESLSTPDFDLVGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTYVRDF-QVRDVPS 133

Query: 121 LSRSRRNRSDPSSSAV---RWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDV 175
           L   R      S+       WSPP  G  KINVDAA       TG G + RN  G +
Sbjct: 134 LGDFRIQEDASSNDRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIVCRNEKGQI 189

BLAST of Lcy11g012320 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.0e-19
Identity = 63/201 (31.34%), Postives = 94/201 (46.77%), Query Frame = 0

Query: 23  ESTDHALFRCQRAYDLWKITFNQVFLE-TKFNKSFVDRWEKICANCFAGELGLVAVTCWA 82
           E T H +  C+RA  +W + F  +F      N SF+D W  +       +  L A T WA
Sbjct: 2   EXTSHXIXLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXWA 61

Query: 83  IWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSLSRSRRNRSDPSSSAVRWSPP 142
           IW DRN   H   +     R  WI+ Y   + +  E   +S  + +   PS    RW PP
Sbjct: 62  IWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPS---CRWLPP 121

Query: 143 SNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEGVSMRFCDLAFEAPEAKVRAIREGII 202
            +   K+N DAA  S  +STG G I R+  G +      F  +      A++R I E + 
Sbjct: 122 RDSAMKVNSDAACRS--TSTGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEALK 181

Query: 203 LGLNFGHRKIIVESDCELAIK 223
           L  +  + +++VESDC+ AI+
Sbjct: 182 LAASRSYTRLVVESDCQEAIR 197

BLAST of Lcy11g012320 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-18
Identity = 70/222 (31.53%), Postives = 104/222 (46.85%), Query Frame = 0

Query: 3    NLKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWKITFN-QVFLETKFNKSFVDRWE 62
            NL  RGI     C  C +  ES  HA F C+RA  +W+  F     L  + N SF++ W 
Sbjct: 1161 NLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWS 1220

Query: 63   KICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSL 122
             +       +L L A+T W IW DRN L H + +  +E + +W    L+ FL+ + +  +
Sbjct: 1221 SLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEW----LTPFLDSHSQAQM 1280

Query: 123  SR-SRRNRSDPSSSAVRWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEGVSMR 182
            S  S R +S+       W P S+   K+N DAA     +ST FG I R+S+  +   +  
Sbjct: 1281 SNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAACRG--ASTSFGCIIRDSSCSLVAATSI 1340

Query: 183  FCDLAFEAPEAKVRAIREGIILGLNFGHRKIIVESDCELAIK 223
                      A++R I EG+          + VESD  LAI+
Sbjct: 1341 RVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQ 1376

BLAST of Lcy11g012320 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.3e-18
Identity = 64/217 (29.49%), Postives = 103/217 (47.47%), Query Frame = 0

Query: 4    LKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWK-ITFNQVFLETKFNKSFVDRWEK 63
            L NR I  + +CP C    ES  HA++ C+ A ++W+   +  V  E + N SF + W  
Sbjct: 1004 LFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVN-SFRELWHA 1063

Query: 64   ICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSLS 123
            +  +    E GL A  CW +W  RN    E      E  +Q ++       E +  ++LS
Sbjct: 1064 LQLSSSGEEQGLFAYLCWGLWNRRNSFIFE---GKSETATQLLHRMTKLAQEFSNANNLS 1123

Query: 124  RSRRNR-SDPSSSAVRWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEGVSMRF 183
             +   R S P +    W PP  G++KINVD A  S  S  G G + RN+NG+     +R 
Sbjct: 1124 HTIHGRQSSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVRR 1183

Query: 184  CDLAFEAPEAKVRAIREGIILGLNFGHRKIIVESDCE 219
               ++ A + ++ A  EG+   ++ G    ++E D +
Sbjct: 1184 IQASYGARQTELMATIEGLRFAIDMGFTAAVLEMDAQ 1216

BLAST of Lcy11g012320 vs. NCBI nr
Match: XP_030943489.1 (uncharacterized protein LOC115968280 [Quercus lobata])

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-20
Identity = 70/214 (32.71%), Postives = 103/214 (48.13%), Query Frame = 0

Query: 3   NLKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWKITFNQVFLETKFNKSFVDRWEK 62
           NLK RGIN S +CPCC    ES  H+L RC+ A  +W          +     F D   K
Sbjct: 114 NLKKRGINLSELCPCCGKDPESITHSLLRCEFAKKVWNCWQECPINISSSQWDFSDVALK 173

Query: 63  ICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSLS 122
           I     A +L +  V  W+IW +RN++ HE    L      +   YL  +     + + S
Sbjct: 174 ILEQGTAADLEVFFVMAWSIWYNRNQVVHESTCQLPNQTWNFAKRYLQDY-----KDATS 233

Query: 123 RSRRNRSDPSSSAVRWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEGVSMRFC 182
            S ++++  S+S   W PP  G++KINVD A S +  ++  G I R+S G +      + 
Sbjct: 234 SSGQDKTCVSNS---WHPPPAGVFKINVDGATSENGRNSSVGVIIRDSKGIIVAACANYL 293

Query: 183 DLAFEAPEAKVRAIREGIILGLNFGHRKIIVESD 217
              F A E +  A+  GI+L    G  +II+ESD
Sbjct: 294 SGQFSAFETETLAVECGILLAQEMGLAQIIIESD 319

BLAST of Lcy11g012320 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia])

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-19
Identity = 67/177 (37.85%), Postives = 87/177 (49.15%), Query Frame = 0

Query: 1   MINLKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWKITFNQVFLETKFNKSFVDRW 60
           M NL  RGI+ +  C  C    E+TDHALF+C+RA ++W I   Q F +  FN S  D  
Sbjct: 14  MRNLIKRGIDPNPNCLVCGKQIETTDHALFKCKRAKEVWNILLPQAFPQCDFNNSVQDGL 73

Query: 61  EKICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHS 120
             +  +    +  LV V  WAIW DRN +  +  IP  + RS WI  Y+  F +V +  S
Sbjct: 74  LYLVESLSTPDFDLVGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTYVRDF-QVRDVPS 133

Query: 121 LSRSRRNRSDPSSSAV---RWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDV 175
           L   R      S+       WSPP  G  KINVDAA       TG G + RN  G +
Sbjct: 134 LGDFRIQEDASSNDRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIVCRNEKGQI 189

BLAST of Lcy11g012320 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 63/201 (31.34%), Postives = 94/201 (46.77%), Query Frame = 0

Query: 23  ESTDHALFRCQRAYDLWKITFNQVFLE-TKFNKSFVDRWEKICANCFAGELGLVAVTCWA 82
           E T H +  C+RA  +W + F  +F      N SF+D W  +       +  L A T WA
Sbjct: 2   EXTSHXIXLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXWA 61

Query: 83  IWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSLSRSRRNRSDPSSSAVRWSPP 142
           IW DRN   H   +     R  WI+ Y   + +  E   +S  + +   PS    RW PP
Sbjct: 62  IWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPS---CRWLPP 121

Query: 143 SNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEGVSMRFCDLAFEAPEAKVRAIREGII 202
            +   K+N DAA  S  +STG G I R+  G +      F  +      A++R I E + 
Sbjct: 122 RDSAMKVNSDAACRS--TSTGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEALK 181

Query: 203 LGLNFGHRKIIVESDCELAIK 223
           L  +  + +++VESDC+ AI+
Sbjct: 182 LAASRSYTRLVVESDCQEAIR 197

BLAST of Lcy11g012320 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 5.1e-18
Identity = 70/222 (31.53%), Postives = 104/222 (46.85%), Query Frame = 0

Query: 3    NLKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWKITFN-QVFLETKFNKSFVDRWE 62
            NL  RGI     C  C +  ES  HA F C+RA  +W+  F     L  + N SF++ W 
Sbjct: 1161 NLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWS 1220

Query: 63   KICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSL 122
             +       +L L A+T W IW DRN L H + +  +E + +W    L+ FL+ + +  +
Sbjct: 1221 SLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEW----LTPFLDSHSQAQM 1280

Query: 123  SR-SRRNRSDPSSSAVRWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEGVSMR 182
            S  S R +S+       W P S+   K+N DAA     +ST FG I R+S+  +   +  
Sbjct: 1281 SNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAACRG--ASTSFGCIIRDSSCSLVAATSI 1340

Query: 183  FCDLAFEAPEAKVRAIREGIILGLNFGHRKIIVESDCELAIK 223
                      A++R I EG+          + VESD  LAI+
Sbjct: 1341 RVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQ 1376

BLAST of Lcy11g012320 vs. NCBI nr
Match: XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-17
Identity = 62/215 (28.84%), Postives = 99/215 (46.05%), Query Frame = 0

Query: 2    INLKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWKITFNQVFLETKFNKSFVDRWE 61
            +NL  R I +   C  C+  +EST HAL+ C    D+W  +  ++          V   E
Sbjct: 1473 VNLTTRKIIHDDKCSICTRESESTVHALWDCAAVQDIWTGSSRKLQKTRHGQADMVQLME 1532

Query: 62   KICANCFAGELGLVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNERHSL 121
            ++       EL L     W +W  RN L H   + +  + +    EY+++F     R  +
Sbjct: 1533 ELLERLNQDELDLFWTQAWLVWCQRNSLLHGGRLKVPSSLNLRAEEYITEFRNAQNRLDV 1592

Query: 122  SRSRRNRSDPSSSAVRWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNGDVEGVSMRF 181
             R++++ SD       W PP  G +K+N DAA  S    TG+GAI RN  G+V       
Sbjct: 1593 QRTQQSISD------IWQPPPPGEFKLNFDAAVFSDLGRTGYGAIIRNEKGEVMAAMSAS 1652

Query: 182  CDLAFEAPEAKVRAIREGIILGLNFGHRKIIVESD 217
              +   + EA+  A R+ +  G++ G  ++IVE D
Sbjct: 1653 GPMVRNSDEAEFLACRKALEFGVDAGFSRLIVEGD 1681

BLAST of Lcy11g012320 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-06
Identity = 51/228 (22.37%), Postives = 85/228 (37.28%), Query Frame = 0

Query: 4   LKNRGINNSSVCPCCSNYNESTDHALFRCQRAYDLWKITFNQVFLETKFNKSFVDRWEKI 63
           L  RG+     CP C   NES +HALF C  A   W+++ + +      +  F +    I
Sbjct: 189 LTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNI 248

Query: 64  CANCFAGELG-----LVAVTCWAIWIDRNKLTHEEVIPLIENRSQWINEYLSKFLEVNER 123
                   +      L     W IW  RN +   +       R       LS   E ++ 
Sbjct: 249 LNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKF------RESPSKTVLSAKAETHDW 308

Query: 124 HSLSRSRRNRSDP----SSSAVRWSPPSNGLWKINVDAAWSSSPSSTGFGAINRNSNG-D 183
            + ++S +    P    + + + W  P     K N DA +         G I RN  G  
Sbjct: 309 LNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTP 368

Query: 184 VEGVSMRFCDLAFEAPEAKVRAIREGIILGLNFGHRKIIVESDCELAI 222
           +   SM+    +    EA+ +A+   +      G+ ++ +E DC+  I
Sbjct: 369 ISWGSMKLAHTS-NPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLI 409

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9H1N45.8e-2033.48RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 ... [more]
A0A6J1CTE37.6e-2037.85uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1BQ495.0e-1931.34uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A6J1DX302.5e-1831.53uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5E4FZN99.3e-1829.49PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_030943489.11.4e-2032.71uncharacterized protein LOC115968280 [Quercus lobata][more]
XP_022145060.11.6e-1937.85uncharacterized protein LOC111014578 [Momordica charantia][more]
XP_022131661.11.0e-1831.34uncharacterized protein LOC111004786 [Momordica charantia][more]
XP_022158377.15.1e-1831.53uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_030923330.11.1e-1728.84uncharacterized protein LOC115950239 [Quercus lobata][more]
Match NameE-valueIdentityDescription
AT3G09510.12.1e-0622.37Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 3..39
e-value: 4.0E-7
score: 30.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 144..226
e-value: 6.5E-5
score: 25.0
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 149..221
e-value: 4.0E-10
score: 39.6
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 3..220
NoneNo IPR availablePANTHERPTHR46736:SF21SUBFAMILY NOT NAMEDcoord: 3..220
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 148..226
e-value: 8.12544E-12
score: 58.4796
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 144..223

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g012320.1Lcy11g012320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity