Lcy11g009040 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAGAAGAAACTTTGTCTCTTTGAACCGTCCATTTTTTAGTTCATCGGAGAAGGAGCTTAAGAATTTGAGGCGTCTTGTTAATTCCAATTCCTCCGATTTTGAGCGACCCTCGAAGTTCTTTGTTTCCTCGCGAAGCAACCGCGAAACTTCCACGCCATTGCTCGTTTTTGACTACTCGTGGCTCGGATCATCTTCATCTTCAACTTCATTGCTGTTTTTTTTTCCTACAAAAAGGGTTTTCTCGCTCTCGATTTTTTGTTAATCCGTTTGCAACTTTCATTTTGAAGACCTAGGTTCTAGCTTCGATCTTGCATCTTACACAGGTCAGTTTCATGGCCAAGTTTCTTTAGAAATGGCTTATTCTTTCTTTCTTTTCTTAAATTCTTCGTGGGAAAGGGAAAGAATGGTGGGGGTAAATCGTTCTTTTGCTTGGGGTTTTTTGGGCGGTTGGTTGCGGAGTGAAATTGATGAAGCTAGAATGGGTTGATGATTATGCGATTGTTTTGCTAGGGATTTTGAATTTTGTTGGTTTCTTGCTTTTTTCATCCGCGTGAAATGGAGAGGTGGGGTTGTTTGGGAAGTTTGTAATGAATGTTATTCTGTTTTTCAATCAATTTCTGAAGTAAGATGGAATTGCTAGGGTTTCCTGAATCGAGTTTTGTTAAAAATGTCCGCAATGTTGCCGCAGAATCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGGCAATTGGTAGCCAATTCAGGTTTTCGAAGGCTCGGAGTTTCGAAGGTGTCCTCGTTTGAGAGCTCTATCTCCGACCACTCTGCAAATAGTTTATCGGCATCCTTCTCTTTGATTTCCCAGTACAGACACTGTGACTGCAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACTTTAGCCCTAGTAATTTCGCTCTCTTTGTTCGCTTCTTTTTCTCAGTTTTATAAATTGCTTGCATTGTTTTAAGATTTGGAATTACTTGCATTTTTCTTCATATGATTCCCCAAGGGGATATATTGATATCTGAAGGAAGTTGGAATGAGAAATCGAGAATCTCTGTGCTCTCATAAGGGCTGTTGGAAAGTGATATGTTGCCTTTTCTTACAGGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCCATAACAGCTGCCATTACTGAAGTGTTAAATGATAGCTTGGAAAATGTATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAGTGAGTTCTTAAATCTTGTCTTGAGTTCAGTTAATGTTGGCATTGTTCAATAATGATAGCATGATGAGGCTTTTAATGAAAGAGCATGTATAACATCTATCATTTTACCTTCTTTTGTATTTTTGCAACCTACTAACTTTTAAATGGATATCATTATATGTTTGTAGATTGAAATGATCCAGGAGGCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGTATTGATATGTATGACTTATTTAATTGCTATACTTATACACAAATGGCTCGCATGATTCTCTGTTAAATATTAATAAGAGAGATATTTGAATTTCACATCTTCCTGTACTTTGATTCATGATGGTCTTTTAGCATTGGAAGTTGTTATCGGCTATTATTTCTACAGACTTGCAGTTATACTATCCTAGTTTAGTTTCCTAGTTTGGTTAGATTGTAGTATCTATTTATAATACTGTCAAATTTGTTTGGTTTAGCAACAAAATAAAGGGAAAAAACCTTGAATTGAAAATTTCTTTGATGATATTATACTAGTATTTAGTTTCCATTGCTAGTCCTGTATCATAATATTCTTATGACTATTTTTCTAGTCTTTAATAGAATAGAAAGATTCTAGAGTGATGTGATGATCTACTCCTAATTTCCTGCTGCTTGAAATAATTAAAGCTTGATCAGGGCTTGAACTATCATGAGTTGGTTAAGAAGTCAAAGGGACAAACCTTACACATAGATGTTATTTATGCTATGGGATCAATTCTTAGTAGCATTCTATTCAAGATGCCAAATAGCTTCAGAGTTTCTTGTATCTGACTAAATGTTGTATTTTGTATAGCATGTGGGTAGGTGGTGTGGGGGGATGGGAATTTTATACAGCTAGCGTATGTCACATTGGATAACTGAACTTACAAGTGAAATATAACACCTACTGTGCTGCAAACTTGACATGCCTTGTGGCCTATGAAATTTGTAGTTTACCATTGTTTACTCAGTGATTTGGACTTTTCAAACTATTATGGGTGTTTGCACTGCTAGGAAATTTAATATTTTTGTATATCATGGACATGAAGCTCCCATATGCTACTGCAAGGAGGTTTAAGGGATCTGACTTTAGAGGATTTTTCGAAATTTGATTTGTTTAAGGGAATCATATTACAGACTTCCCTTTTGCTTACTGCTTCTAAGAACTTAGCTGAAATGTTTATGATTCTTTTCCTGTTAGTTTACTTTGTAAAAAGTTTCGTTACAATGTTGGTTTGTTAGTTTATGTTCCCTGACCATTGGATTGAGCACTTCTAATGTAGGGGCACCATTTTTCCTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATCGATAAGATGCGCAGTGAGTTGAGGTTTGTTTTACTGTACCTCAGTTCATATGAAGTGTAAACTAACTTCATATTTAGGCATTAGCTTGTACTCTCTTGAATTGATCTTATTTGTGCAAAGACCTTTGATTATGGTGCAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAAAGAGGGTAAGTGAGTTTTTTCAGTAAAAATAGAAGCACGACAGTGTGTTAGAGCATCTATTTTGGTTTGATTTTCCTTTGCTTACAAGTTATATTGTTCACAAGTGCAGGAGGATACGTGATGAGCTAGCTAATCAGAATGCTGAAACAACCAACCTAACTAATAAACTTGATCGGGTAAGGCCAACTACTTGTCTAGATAGGAACAAATTCACACGCAGAATACAGACTTAGACTTCTGAAGTCTTATTAACACTAGCCAAGTAAACATCAGACTGATTTGTGAGCTGCAAATTCCTTGAAACTTTGTAATATTAATTCCTGACAGAAGTAATCATTTCAGATTTTTATTCTTGCTCAAAATTTCAGGAAATTCATGCTCTCAGGGCACAGCTGGAAGCTGCCAAATACGATGTAATAAAATACTGCATCGGTACCCTTGTTTCCATATCTGCTGTTGGTCTAGCTGTGCTCCGCATCTTAATGTAAACAATAAGGTCGTGTTCACGAAATTCTGATTCAAGGACGAGATTTTTTAAAATTCTTCAACAAGATGACATTATTTCTATTTTTTTTTTATAACCTTCTTTTAGAGAGAGGATTCTGGAAAGTTAGCTACTTTCTCCGAGAGAATTTCCATCGATTATTTGTTTTCTCATGGAAATGGTTCTCGATGTAGCATGTGAATTGTACTTATTTTAGAAGATGATCATAGTGATAATAAAAATTGTTGTAAAGACTTTCTTTTGATGTGATAACTGATAAAGGGGATGCTAAAAAGATAAGTATCCATATTACTGAA TGAGAAGAAACTTTGTCTCTTTGAACCGTCCATTTTTTAGTTCATCGGAGAAGGAGCTTAAGAATTTGAGGCGTCTTGTTAATTCCAATTCCTCCGATTTTGAGCGACCCTCGAAGTTCTTTGTTTCCTCGCGAAGCAACCGCGAAACTTCCACGCCATTGCTCGTTTTTGACTACTCGTGGCTCGGATCATCTTCATCTTCAACTTCATTGCTGTTTTTTTTTCCTACAAAAAGGGTTTTCTCGCTCTCGATTTTTTGTTAATCCGTTTGCAACTTTCATTTTGAAGACCTAGGTTCTAGCTTCGATCTTGCATCTTACACAGGGTTTCCTGAATCGAGTTTTGTTAAAAATGTCCGCAATGTTGCCGCAGAATCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGGCAATTGGTAGCCAATTCAGGTTTTCGAAGGCTCGGAGTTTCGAAGGTGTCCTCGTTTGAGAGCTCTATCTCCGACCACTCTGCAAATAGTTTATCGGCATCCTTCTCTTTGATTTCCCAGTACAGACACTGTGACTGCAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACTTTAGCCCTAGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCCATAACAGCTGCCATTACTGAAGTGTTAAATGATAGCTTGGAAAATGTATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAATTGAAATGATCCAGGAGGCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGGGCACCATTTTTCCTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATCGATAAGATGCGCAGTGAGTTGAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAAAGAGGGAGGATACGTGATGAGCTAGCTAATCAGAATGCTGAAACAACCAACCTAACTAATAAACTTGATCGGGAAATTCATGCTCTCAGGGCACAGCTGGAAGCTGCCAAATACGATGTAATAAAATACTGCATCGGTACCCTTGTTTCCATATCTGCTGTTGGTCTAGCTGTGCTCCGCATCTTAATGTAAACAATAAGGTCGTGTTCACGAAATTCTGATTCAAGGACGAGATTTTTTAAAATTCTTCAACAAGATGACATTATTTCTATTTTTTTTTTATAACCTTCTTTTAGAGAGAGGATTCTGGAAAGTTAGCTACTTTCTCCGAGAGAATTTCCATCGATTATTTGTTTTCTCATGGAAATGGTTCTCGATGTAGCATGTGAATTGTACTTATTTTAGAAGATGATCATAGTGATAATAAAAATTGTTGTAAAGACTTTCTTTTGATGTGATAACTGATAAAGGGGATGCTAAAAAGATAAGTATCCATATTACTGAA ATGTCCGCAATGTTGCCGCAGAATCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGGCAATTGGTAGCCAATTCAGGTTTTCGAAGGCTCGGAGTTTCGAAGGTGTCCTCGTTTGAGAGCTCTATCTCCGACCACTCTGCAAATAGTTTATCGGCATCCTTCTCTTTGATTTCCCAGTACAGACACTGTGACTGCAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACTTTAGCCCTAGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCCATAACAGCTGCCATTACTGAAGTGTTAAATGATAGCTTGGAAAATGTATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAATTGAAATGATCCAGGAGGCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGGGCACCATTTTTCCTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATCGATAAGATGCGCAGTGAGTTGAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAAAGAGGGAGGATACGTGATGAGCTAGCTAATCAGAATGCTGAAACAACCAACCTAACTAATAAACTTGATCGGGAAATTCATGCTCTCAGGGCACAGCTGGAAGCTGCCAAATACGATGTAATAAAATACTGCATCGGTACCCTTGTTTCCATATCTGCTGTTGGTCTAGCTGTGCTCCGCATCTTAATGTAA MSAMLPQNRMAAGAACKRVGQLVANSGFRRLGVSKVSSFESSISDHSANSLSASFSLISQYRHCDCRQISQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENVSHSFVSKGEMQKIEMIQEANLSKFKSEVQSSQGHHFSLLGHETEKLRNDIDKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHALRAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM Homology
BLAST of Lcy11g009040 vs. ExPASy Swiss-Prot
Match: P43557 (Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FMP32 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16 Identity = 46/166 (27.71%), Postives = 97/166 (58.43%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy Swiss-Prot
Match: Q9GZT6 (Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens OX=9606 GN=CCDC90B PE=1 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14 Identity = 55/196 (28.06%), Postives = 99/196 (50.51%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy Swiss-Prot
Match: Q8C3X2 (Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus OX=10090 GN=Ccdc90b PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.9e-14 Identity = 52/196 (26.53%), Postives = 101/196 (51.53%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy Swiss-Prot
Match: Q4V897 (Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ccdc90b PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.0e-14 Identity = 55/196 (28.06%), Postives = 98/196 (50.00%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy Swiss-Prot
Match: Q6DJ87 (Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis OX=8364 GN=ccdc90b PE=2 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 9.0e-14 Identity = 57/210 (27.14%), Postives = 104/210 (49.52%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy TrEMBL
Match: A0A0A0KZG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043920 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 7.2e-123 Identity = 242/258 (93.80%), Postives = 250/258 (96.90%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy TrEMBL
Match: A0A1S3BWD9 (protein FMP32, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494361 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122 Identity = 241/258 (93.41%), Postives = 249/258 (96.51%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy TrEMBL
Match: A0A6J1C4U0 (protein FMP32, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008484 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 2.0e-120 Identity = 239/255 (93.73%), Postives = 244/255 (95.69%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy TrEMBL
Match: A0A6J1J4Q4 (protein FMP32, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481228 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.8e-119 Identity = 237/255 (92.94%), Postives = 245/255 (96.08%), Query Frame = 0
BLAST of Lcy11g009040 vs. ExPASy TrEMBL
Match: A0A1S3BX04 (protein FMP32, mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494361 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.8e-119 Identity = 235/249 (94.38%), Postives = 242/249 (97.19%), Query Frame = 0
BLAST of Lcy11g009040 vs. NCBI nr
Match: XP_038876775.1 (protein FMP32, mitochondrial-like isoform X1 [Benincasa hispida]) HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123 Identity = 243/258 (94.19%), Postives = 251/258 (97.29%), Query Frame = 0
BLAST of Lcy11g009040 vs. NCBI nr
Match: XP_011653145.1 (protein FMP32, mitochondrial isoform X1 [Cucumis sativus] >KGN53276.1 hypothetical protein Csa_014890 [Cucumis sativus]) HSP 1 Score: 449.9 bits (1156), Expect = 1.5e-122 Identity = 242/258 (93.80%), Postives = 250/258 (96.90%), Query Frame = 0
BLAST of Lcy11g009040 vs. NCBI nr
Match: XP_008453713.1 (PREDICTED: protein FMP32, mitochondrial-like isoform X1 [Cucumis melo]) HSP 1 Score: 448.4 bits (1152), Expect = 4.3e-122 Identity = 241/258 (93.41%), Postives = 249/258 (96.51%), Query Frame = 0
BLAST of Lcy11g009040 vs. NCBI nr
Match: XP_038876776.1 (protein FMP32, mitochondrial-like isoform X2 [Benincasa hispida]) HSP 1 Score: 442.2 bits (1136), Expect = 3.1e-120 Identity = 237/249 (95.18%), Postives = 244/249 (97.99%), Query Frame = 0
BLAST of Lcy11g009040 vs. NCBI nr
Match: XP_022136906.1 (protein FMP32, mitochondrial-like isoform X1 [Momordica charantia]) HSP 1 Score: 441.8 bits (1135), Expect = 4.0e-120 Identity = 239/255 (93.73%), Postives = 244/255 (95.69%), Query Frame = 0
BLAST of Lcy11g009040 vs. TAIR 10
Match: AT2G16460.1 (Protein of unknown function (DUF1640) ) HSP 1 Score: 309.7 bits (792), Expect = 2.2e-84 Identity = 171/219 (78.08%), Postives = 191/219 (87.21%), Query Frame = 0
BLAST of Lcy11g009040 vs. TAIR 10
Match: AT3G51090.1 (Protein of unknown function (DUF1640) ) HSP 1 Score: 298.5 bits (763), Expect = 5.1e-81 Identity = 172/251 (68.53%), Postives = 196/251 (78.09%), Query Frame = 0
BLAST of Lcy11g009040 vs. TAIR 10
Match: AT2G16460.2 (Protein of unknown function (DUF1640) ) HSP 1 Score: 207.6 bits (527), Expect = 1.2e-53 Identity = 115/159 (72.33%), Postives = 132/159 (83.02%), Query Frame = 0
BLAST of Lcy11g009040 vs. TAIR 10
Match: AT2G35090.1 (Protein of unknown function (DUF1640) ) HSP 1 Score: 63.5 bits (153), Expect = 2.8e-10 Identity = 49/176 (27.84%), Postives = 85/176 (48.30%), Query Frame = 0
BLAST of Lcy11g009040 vs. TAIR 10
Match: AT2G35070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube development, pollen development; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT2G35090.1); Has 62 Blast hits to 62 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 2.6e-08 Identity = 46/172 (26.74%), Postives = 79/172 (45.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|