Tan0008426 (gene) Snake gourd v1

Overview


Name	Tan0008426
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DNA polymerase delta subunit 4
Location	LG07: 5705674 .. 5707111 (-)
RNA-Seq Expression	Tan0008426
Synteny	Tan0008426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGAACAACAACAAATTCAAAATTTGAAAATCGATCAGAGAGATAGAGAGGGAGAAAAATGGCTTCGGCTCGGGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAAGAGTGGAATCTCCAAGGCCAACAACAAGGCTTCAAAATCCTCTTCTAGAAAAACCAAATCTCCGGCCAACTCTGCAACTTTGGGCTCCGATGGCGTCCAACCGGCGGCGCTTATTTCTCACGGTTCCCTGGATCTTCGAGGTCTATCTCTCTCTCTCTCTTTTCTTTTCTCGACTCTTCTATTTCCTCCCATTCCTGGAAAACTGTTTTCTTCATTAGGTTTTTTGAAACTGCAATTACTGTTGTGGACTTTGTGCCTCGTGATTGTGAAGGATTAAACATTTTGCATGATTACAATTAACTTATTCAATAGTTGAAATTAAAAGCTTTCAATATTTGGATCATTTTTAATGTTTCGGCTGAAGAATATTATCGAGTTAATATGTTTAGTCTTATGCCTCGTGATATGAAGGATTAGGCATGTTGCAGTTTAGAAGTTCATGGGTATCACTGAAGTCCTTGGATAGTTGAATTAAGGACATCCATTGTTTGGATTTCTGTAACTTTCGACTGTGAGATGTTATTAAATTAATGTGTTAGACTTCTGCCTCATGTTTATGAAGGATTAAGCATGCAGTCAAGAGGTTGTGGGATACCGGTTGCTATTAAGTTATGTAATAGTTGAATTTTGGTCACTTAATGCTCGGGTTTCTTTATACTTTCGACTGCAATACTATTCTCTGACTTGTGTGTTTGGACGTCTAATATGGCTATACCGCCGGGATATTTATGTAACTTTTGCTTCGGCAATTTTTATGAACTGCATTCTGTTTCATTTTGTTTTAGATGATTATGGCGAGTCTGAGAATATGTTGAGGCAATTTGACATGAACACGGTCTATGGACCTTGCCTTGGAATGACCAGAATGCAACGGTGGGAGCGTGCCTGTAATCTTGGTTTGAACCCTCCAAGAGAAATTGAGACACTCTTAAAGGCTGGCAAAGTGCAGTTAGAGTCCTTGTGGGATTCCCGAGTTTAAAGACTATTATGCTAGCTGTGTTATTTTTGGGTAATGTATGAACTGTATGCTGTGCTTTTGGACAAAATCTTCAGCCTCTGGCTGAAATGATAATCACTTTTTCTATGATGTGAATGGGCTAGAATGTTTACTGATGTCAACTATCTAGTTATTTACCTTTTCGATTATGTGTTGCAAACCTCTACCATGTAATGTACAGTTAAATTTGGTGGATTTTTTCCTTTCCTGGTGTTGTTATATTTGCTCAAATAACTTATTGTTTTTAGTTTCTAACTTGATTTCATGTGTGGATCTGTGATTGAAATGCCTTTCAGTTCCAGAAAATGAAGAGGAACAAAGATCTTACGA

mRNA sequence

AAGAAGAACAACAACAAATTCAAAATTTGAAAATCGATCAGAGAGATAGAGAGGGAGAAAAATGGCTTCGGCTCGGGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAAGAGTGGAATCTCCAAGGCCAACAACAAGGCTTCAAAATCCTCTTCTAGAAAAACCAAATCTCCGGCCAACTCTGCAACTTTGGGCTCCGATGGCGTCCAACCGGCGGCGCTTATTTCTCACGGTTCCCTGGATCTTCGAGATGATTATGGCGAGTCTGAGAATATGTTGAGGCAATTTGACATGAACACGGTCTATGGACCTTGCCTTGGAATGACCAGAATGCAACGGTGGGAGCGTGCCTGTAATCTTGGTTTGAACCCTCCAAGAGAAATTGAGACACTCTTAAAGGCTGGCAAAGTGCAGTTAGAGTCCTTGTGGGATTCCCGAGTTTAAAGACTATTATGCTAGCTGTGTTATTTTTGGGTAATGTATGAACTGTATGCTGTGCTTTTGGACAAAATCTTCAGCCTCTGGCTGAAATGATAATCACTTTTTCTATGATGTGAATGGGCTAGAATGTTTACTGATGTCAACTATCTAGTTATTTACCTTTTCGATTATGTGTTGCAAACCTCTACCATGTAATGTACAGTTAAATTTGGTGGATTTTTTCCTTTCCTGGTGTTGTTATATTTGCTCAAATAACTTATTGTTTTTAGTTTCTAACTTGATTTCATGTGTGGATCTGTGATTGAAATGCCTTTCAGTTCCAGAAAATGAAGAGGAACAAAGATCTTACGA

Coding sequence (CDS)

ATGGCTTCGGCTCGGGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAAGAGTGGAATCTCCAAGGCCAACAACAAGGCTTCAAAATCCTCTTCTAGAAAAACCAAATCTCCGGCCAACTCTGCAACTTTGGGCTCCGATGGCGTCCAACCGGCGGCGCTTATTTCTCACGGTTCCCTGGATCTTCGAGATGATTATGGCGAGTCTGAGAATATGTTGAGGCAATTTGACATGAACACGGTCTATGGACCTTGCCTTGGAATGACCAGAATGCAACGGTGGGAGCGTGCCTGTAATCTTGGTTTGAACCCTCCAAGAGAAATTGAGACACTCTTAAAGGCTGGCAAAGTGCAGTTAGAGTCCTTGTGGGATTCCCGAGTTTAA

Protein sequence

MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSLDLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLESLWDSRV

Homology

[Close]

BLAST of Tan0008426 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 72  MLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKA 115
           +LRQFD+   YGPC G+TR+QRW RA  +GL PP E+  +LKA
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWSRAEQMGLKPPLEVYQVLKA 90

[Close]

BLAST of Tan0008426 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.7e-08
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 68  ESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKA 115
           E   +LRQFD+   YGPC G+TR+QRW RA  +GL PP E+  +L++
Sbjct: 44  EELELLRQFDLAWQYGPCTGITRLQRWHRAEQMGLKPPPEVHQVLQS 90

[Close]

BLAST of Tan0008426 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.2e-08
Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 63  RDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLK 114
           RD+      +LRQFD+   YGPC G+TR+QRW RA  +GL PP E+  +LK
Sbjct: 39  RDEEEAELELLRQFDLAWQYGPCTGITRLQRWCRAKQMGLEPPPEVWQVLK 89

[Close]

BLAST of Tan0008426 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 70  ENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLL 113
           E +L  FD    YGP LGMTRMQRW+RA N  LNPP  +  +L
Sbjct: 94  EFILHHFDTTARYGPYLGMTRMQRWKRAKNFNLNPPETVGKIL 136

[Close]

BLAST of Tan0008426 vs. NCBI nr
Match: XP_038875328.1 (DNA polymerase delta subunit 4 [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 2.7e-53
Identity = 111/127 (87.40%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MASARGGLKDFYKQRK SGISKAN+KASK SSRK KSPANSA+LGSD VQPAALISHGSL
Sbjct: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DL+DDYG  ENMLRQFDMN  YGPCLGMTRM RWERACNLGLNPP++IETLLKA KVQLE
Sbjct: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120

Query: 121 SLWDSRV 128
            LWDSRV
Sbjct: 121 CLWDSRV 127

[Close]

BLAST of Tan0008426 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 109/127 (85.83%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MAS RGGLKDFYKQRK SGISKA  KASK SSRKTKSPANSA+LGS+ VQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DL+DDYGESENMLRQFDMN  YGPCLGMTRM RWERAC+LGLNPP++I TLLKAGKVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 SLWDSRV 128
            LWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Tan0008426 vs. NCBI nr
Match: XP_004143634.1 (uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_000175 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-51
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MAS RGGLKDFYKQRK SGISKA  KASK SSRKTKSPANSA+LGSD VQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSDAVQPAALVSHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DL+DDYG SEN LRQFDMNT YGPCLGMTRM RWERAC+LGLNPP++I TLLKAGKVQLE
Sbjct: 61  DLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 SLWDSRV 128
            LWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Tan0008426 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 7.7e-48
Identity = 104/127 (81.89%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MASARGG+KDFYKQRK SG+S    K SK SSRKTKS ANSATL SDGVQPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGVS----KVSKPSSRKTKSRANSATLDSDGVQPAALISHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DLRDDYGESEN+LRQFDMN  YGPCLGMTRM+RWE A  LGLNPP+EIETLLK GKVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 SLWDSRV 128
            LW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Tan0008426 vs. NCBI nr
Match: XP_023532644.1 (uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 2.2e-47
Identity = 103/127 (81.10%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MASARGG+KDFYKQRK SG+S    K SK SSRKTKS ANSATL SDGVQPA LISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGVS----KVSKPSSRKTKSRANSATLDSDGVQPAVLISHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DLRDDYGESEN+LRQFDMN  YGPCLGMTRM+RWE A  LGLNPP+EIETLLK GKVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELAGKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 SLWDSRV 128
            LW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Tan0008426 vs. ExPASy TrEMBL
Match: A0A5A7UNL0 (DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00460 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.3e-52
Identity = 109/127 (85.83%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MAS RGGLKDFYKQRK SGISKA  KASK SSRKTKSPANSA+LGS+ VQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DL+DDYGESENMLRQFDMN  YGPCLGMTRM RWERAC+LGLNPP++I TLLKAGKVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 SLWDSRV 128
            LWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Tan0008426 vs. ExPASy TrEMBL
Match: A0A1S3CT23 (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.3e-52
Identity = 109/127 (85.83%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MAS RGGLKDFYKQRK SGISKA  KASK SSRKTKSPANSA+LGS+ VQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DL+DDYGESENMLRQFDMN  YGPCLGMTRM RWERAC+LGLNPP++I TLLKAGKVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 SLWDSRV 128
            LWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Tan0008426 vs. ExPASy TrEMBL
Match: A0A0A0KND6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MAS RGGLKDFYKQRK SGISKA  KASK SSRKTKSPANSA+LGSD VQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSDAVQPAALVSHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DL+DDYG SEN LRQFDMNT YGPCLGMTRM RWERAC+LGLNPP++I TLLKAGKVQLE
Sbjct: 61  DLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 SLWDSRV 128
            LWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Tan0008426 vs. ExPASy TrEMBL
Match: A0A6J1H180 (uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC111459143 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.7e-48
Identity = 104/127 (81.89%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MASARGG+KDFYKQRK SG+S    K SK SSRKTKS ANSATL SDGVQPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGVS----KVSKPSSRKTKSRANSATLDSDGVQPAALISHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DLRDDYGESEN+LRQFDMN  YGPCLGMTRM+RWE A  LGLNPP+EIETLLK GKVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 SLWDSRV 128
            LW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Tan0008426 vs. ExPASy TrEMBL
Match: A0A6J1K4T3 (uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 9.2e-47
Identity = 102/127 (80.31%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKSGISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISHGSL 60
           MASARGG+KDFYKQRK SG+S    K SK SS KTKS A+SATL SDGVQPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGVS----KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSL 60

Query: 61  DLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKVQLE 120
           DLRDDYGESEN+LRQFDMN  YGPCLGMTRM+RWE A  LGLNPP+EIETLLK GKVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 SLWDSRV 128
            LW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Tan0008426 vs. TAIR 10
Match: AT1G09815.1 (polymerase delta 4 )

HSP 1 Score: 144.8 bits (364), Expect = 4.7e-35
Identity = 80/130 (61.54%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKKS---GISKANNKASKSSSRKTKSPANSATLGSDGVQPAALISH 60
           MA+    LK FYKQ K +   GISK     SK SSRK  +P ++A  GSD  QPAALISH
Sbjct: 1   MATTAKNLKGFYKQTKSNITGGISK-----SKPSSRKV-APKHAAAQGSDVTQPAALISH 60

Query: 61  GSLDLRDDYGESENMLRQFDMNTVYGPCLGMTRMQRWERACNLGLNPPREIETLLKAGKV 120
           GS+DL +DY + E MLRQFDMN  YGPCLGMTR+ RWERA  LG+NPP EIE LLK GKV
Sbjct: 61  GSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKV 120

Query: 121 QLESLWDSRV 128
           Q + LW  RV
Sbjct: 121 QQDCLWQGRV 124

The following BLAST results are available for this feature:

BLAST of Tan0008426 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CWP8	2.8e-08	58.14	DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1	[more]
Q3T0X9	4.7e-08	51.06	DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1	[more]
Q9HCU8	6.2e-08	50.98	DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1	[more]
O59835	1.2e-06	55.81	DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of Tan0008426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875328.1	2.7e-53	87.40	DNA polymerase delta subunit 4 [Benincasa hispida]	[more]
XP_008467236.1	1.5e-51	85.83	PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polym...	[more]
XP_004143634.1	2.6e-51	85.83	uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical ...	[more]
XP_022957680.1	7.7e-48	81.89	uncharacterized protein LOC111459143 [Cucurbita moschata]	[more]
XP_023532644.1	2.2e-47	81.10	uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0008426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNL0	7.3e-52	85.83	DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CT23	7.3e-52	85.83	DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1	[more]
A0A0A0KND6	1.2e-51	85.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1	[more]
A0A6J1H180	3.7e-48	81.89	uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC1114591...	[more]
A0A6J1K4T3	9.2e-47	80.31	uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182...	[more]

BLAST of Tan0008426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09815.1	4.7e-35	61.54	polymerase delta 4	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007218	DNA polymerase delta, subunit 4	PFAM	PF04081	DNA_pol_delta_4	coord: 64..114 e-value: 2.0E-20 score: 73.5
IPR007218	DNA polymerase delta, subunit 4	PANTHER	PTHR14303	DNA POLYMERASE DELTA SUBUNIT 4	coord: 5..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR14303:SF12	DNA POLYMERASE DELTA SUBUNIT 4	coord: 5..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008426.1	Tan0008426.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0000731	DNA synthesis involved in DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0043625	delta DNA polymerase complex
molecular_function	GO:0003887	DNA-directed DNA polymerase activity