Lcy09g012510 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGACAAGGCCGTTCACCCAGGAGGAAGTGATTATCGCTATGAAAAATATGAACCCTACAAAAGCTCCAGGTCCTGATGGAGCTCATGCCCTGTTTTTCCAAAAGTACTGGGATATAATAGGAGAAGAAACCACTAAGGTGGCCCTGAACATTCTAAATGCGAAGGAAGTGGTGGACCCCCTAAACCACACCTACATTACGCTCATCCCAAAGAAAGAGAATGTAGAACACATGAAGGACTTCAGACCAATAAGCCTCTGCAATGTCACCTACAAAGTTGTGGCAAAAGCTTTGGCCAACAGGATGAAAAACATGCTAAAAACGGTTATATCCCCAAATCAGTCAGCTTTCGTACCGGGAAGATTGATATCTGATAATGTCCTGATTGGATTCGAAAGTATTCATGCTTTAAAGAACAAAAGACAGGGTAGAGACGGGTTCATAGCGGCAAAGCTCGATATGAGCAAGGCATATGATAGGGTGGAATGGGGCTTTATTGAAGCTATCATGACTCAAATGGGATTTCATGAGGACTGGAGAAAAAAGATTATGAATTGCATAAAATCAGTGAGATATTCTATTCTAATAAATGGCTACCCTCAAAACAAAGTGGTTCCTACCAGAGGCCTTCGACAAGGGGACCCTCTCTCCCCGTACCTCTTTCTGCTATGTGCTGAAGGTTTTACTGCTCTTTTAAACAGGGAAGAATCGATCTCTAATCTTACTGGTTTTAGTATCAATAAACATAGCCCTCCCCTTACGCATTTGTTTTTTGCAGATGACAGCATGATTTTCTTTAAAGCGAAGGAAGGAGAAATCCAATCTATGAACAGAATCCTGCAGATCTATGAAAAGGCCTCGGGTCAAACCATCAACAGAGACAAATCCATTTTTATGGCTAGCAAAAACGTTAAGGACGACATCATATCTTATTGCGAAAGATCTCTGAAAATAAAGAAAACAGACCAACTAGGCCACTACCTAGGAATGCCATCCCAAACAGGTCGAAACAAGAGAAAGGCTTTTAACTCCATCAGAGACAGAGTGAGGAAGATTCTTTCAGGGTGGAAGGAAAAACTTTTCTCCCTTGGGGGTAAAGAGGTCTTGATTAAGGCAATTGCCCAAGCAATTCCTATTTACACGATGAGTTGCTTCCGTCTCCCAAAAGGTATCAGCAACGAGATTAAAAGACTCTGTGCGAATTTCTGGTGGGGATCTCACGGAGAAAAAAGAAAAAGCCATTAGATGAAGTGGAAGAAGATGTGCAACAACAAAGAAGAGGGAGCAATGGGATTTCGAGATATTTCAATCTTTAACCAAGCTATGCTGGCAAAGCAAAGTTGGAGATTGCTAAGAAATCCTGACAGCCTCCTATACAAAGTTTTAAGGGGCAAATACTTCAAGGATGGTAATTTTCTAAAGGCTCCAATTGGGAAAAATCCATCCTTGACATGGAGGAGTATTTGTTGGGGAAGAGATCTTTTTGAAAAGGGTTTTAGATGGAAGGTAGGTAATGGTAATTATATCCATCTAAATGAAGACCCGTGGATCCCTAGAAATGGAAACTACAAGCTAAGCACTGTCCCTGATAGTCTCAAAGGAAAAACAGTGAGTGCTATTATTGATGAGAATAACAAGTGGAGAGAAGACCTTATATCTCATACTTTTGATCCTCAAGACAAGGAAGACATTCTAAGCATCCCTTTGGGATCAAAGAATTCTAAAGATGAGATAATATGGGGGAAAGATAAAAGGGGCCTTTTTTCAGTCAAGAGTGCATATCGATTGGCAAAAGACCTGAATAACATCAATGAAGCCTCAGCATCAAACCAGAACCTATCTTCGAATCTTTGGAGGAGCCTTTGGAAAACAGAAGCAATCCCAAGAGCAAAAGCTTGCGCGTGGAAAATTATCAATGATATTGTGCCAAACAAAGCAAACATTAAAAAAAGGGGGATAGACTTAAACTCTTCTTGCTCTCTCTGTGGAAAAAAAGAAGAAACATCCAGCCATCTCTTTTGGGAGTGCAAATCCTCAAAAAGAGTTTGGCTTGACATAATCCCTAATTCTCTAATTATGTTTGGTTTGTGCAAGGCAAATTGGACTCCAATGGACTATTGGCAATGGATGGTAGAAAATGGAACCAACGAAGATCATAGCAAAGTGGTGATAACGTTATGGAGCATCTGGAATGCGAGGAATAAAATAATTAACCAGCAAATCTCTCCAGACAATAAACGATTATCATCCCAAATTCAAGATGCAATCACAGAGCAATTAAAGAGAAATACCTCTTGGGCTGATCGAGAAAAGAAGGAGAAATCTGGGAACCCCCTGAATCATGAAGATTGGTCGAAACTGCCCCCCAATTGTTGGAAAATGAATTCCGACGCCGCATGGTTTGAGAAAGATAATGCATGA ATGTTGACAAGGCCGTTCACCCAGGAGGAAGTGATTATCGCTATGAAAAATATGAACCCTACAAAAGCTCCAGGTCCTGATGGAGCTCATGCCCTGTTTTTCCAAAAGTACTGGGATATAATAGGAGAAGAAACCACTAAGGTGGCCCTGAACATTCTAAATGCGAAGGAAGTGGTGGACCCCCTAAACCACACCTACATTACGCTCATCCCAAAGAAAGAGAATCTAAGCACTGTCCCTGATAGTCTCAAAGGAAAAACAGTGAGTGCTATTATTGATGAGAATAACAAGTGGAGAGAAGACCTTATATCTCATACTTTTGATCCTCAAGACAAGGAAGACATTCTAAGCATCCCTTTGGGATCAAAGAATTCTAAAGATGAGATAATATGGGGGAAAGATAAAAGGGGCCTTTTTTCAGTCAAGAGTGCATATCGATTGGCAAAAGACCTGAATAACATCAATGAAGCCTCAGCATCAAACCAGAACCTATCTTCGAATCTTTGGAGGAGCCTTTGGAAAACAGAAGCAATCCCAAGAGCAAAAGCTTGCGCGTGGAAAATTATCAATGATATTGTGCCAAACAAAGCAAACATTAAAAAAAGGGGGATAGACTTAAACTCTTCTTGCTCTCTCTGTGGAAAAAAAGAAGAAACATCCAGCCATCTCTTTTGGGAGTGCAAATCCTCAAAAAGAGTTTGGCTTGACATAATCCCTAATTCTCTAATTATGTTTGGTTTGTGCAAGGCAAATTGGACTCCAATGGACTATTGGCAATGGATGGTAGAAAATGGAACCAACGAAGATCATAGCAAAGTGGTGATAACGTTATGGAGCATCTGGAATGCGAGGAATAAAATAATTAACCAGCAAATCTCTCCAGACAATAAACGATTATCATCCCAAATTCAAGATGCAATCACAGAGCAATTAAAGAGAAATACCTCTTGGGCTGATCGAGAAAAGAAGGAGAAATCTGGGAACCCCCTGAATCATGAAGATTGGTCGAAACTGCCCCCCAATTGTTGGAAAATGAATTCCGACGCCGCATGGTTTGAGAAAGATAATGCATGA ATGTTGACAAGGCCGTTCACCCAGGAGGAAGTGATTATCGCTATGAAAAATATGAACCCTACAAAAGCTCCAGGTCCTGATGGAGCTCATGCCCTGTTTTTCCAAAAGTACTGGGATATAATAGGAGAAGAAACCACTAAGGTGGCCCTGAACATTCTAAATGCGAAGGAAGTGGTGGACCCCCTAAACCACACCTACATTACGCTCATCCCAAAGAAAGAGAATCTAAGCACTGTCCCTGATAGTCTCAAAGGAAAAACAGTGAGTGCTATTATTGATGAGAATAACAAGTGGAGAGAAGACCTTATATCTCATACTTTTGATCCTCAAGACAAGGAAGACATTCTAAGCATCCCTTTGGGATCAAAGAATTCTAAAGATGAGATAATATGGGGGAAAGATAAAAGGGGCCTTTTTTCAGTCAAGAGTGCATATCGATTGGCAAAAGACCTGAATAACATCAATGAAGCCTCAGCATCAAACCAGAACCTATCTTCGAATCTTTGGAGGAGCCTTTGGAAAACAGAAGCAATCCCAAGAGCAAAAGCTTGCGCGTGGAAAATTATCAATGATATTGTGCCAAACAAAGCAAACATTAAAAAAAGGGGGATAGACTTAAACTCTTCTTGCTCTCTCTGTGGAAAAAAAGAAGAAACATCCAGCCATCTCTTTTGGGAGTGCAAATCCTCAAAAAGAGTTTGGCTTGACATAATCCCTAATTCTCTAATTATGTTTGGTTTGTGCAAGGCAAATTGGACTCCAATGGACTATTGGCAATGGATGGTAGAAAATGGAACCAACGAAGATCATAGCAAAGTGGTGATAACGTTATGGAGCATCTGGAATGCGAGGAATAAAATAATTAACCAGCAAATCTCTCCAGACAATAAACGATTATCATCCCAAATTCAAGATGCAATCACAGAGCAATTAAAGAGAAATACCTCTTGGGCTGATCGAGAAAAGAAGGAGAAATCTGGGAACCCCCTGAATCATGAAGATTGGTCGAAACTGCCCCCCAATTGTTGGAAAATGAATTCCGACGCCGCATGGTTTGAGAAAGATAATGCATGA MLTRPFTQEEVIIAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDPLNHTYITLIPKKENLSTVPDSLKGKTVSAIIDENNKWREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRGLFSVKSAYRLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGIDLNSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMVENGTNEDHSKVVITLWSIWNARNKIINQQISPDNKRLSSQIQDAITEQLKRNTSWADREKKEKSGNPLNHEDWSKLPPNCWKMNSDAAWFEKDNA Homology
BLAST of Lcy09g012510 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 4.0e-04 Identity = 24/78 (30.77%), Postives = 39/78 (50.00%), Query Frame = 0
BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: Q2QNX8 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g36390 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 5.8e-30 Identity = 86/283 (30.39%), Postives = 143/283 (50.53%), Query Frame = 0
BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: Q2QNX8 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g36390 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.6e-03 Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0
HSP 2 Score: 139.4 bits (350), Expect = 2.9e-29 Identity = 86/271 (31.73%), Postives = 138/271 (50.92%), Query Frame = 0
BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: A0A7N2N3A5 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.9e-29 Identity = 80/291 (27.49%), Postives = 127/291 (43.64%), Query Frame = 0
BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: A0A803PUL2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.7e-29 Identity = 88/327 (26.91%), Postives = 149/327 (45.57%), Query Frame = 0
BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: A0A803QR46 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 4.9e-29 Identity = 106/422 (25.12%), Postives = 178/422 (42.18%), Query Frame = 0
BLAST of Lcy09g012510 vs. NCBI nr
Match: KAF5474581.1 (hypothetical protein F2P56_006469 [Juglans regia]) HSP 1 Score: 159.8 bits (403), Expect = 4.2e-35 Identity = 97/339 (28.61%), Postives = 165/339 (48.67%), Query Frame = 0
BLAST of Lcy09g012510 vs. NCBI nr
Match: KAF7842590.1 (putative RNA-directed DNA polymerase [Senna tora]) HSP 1 Score: 147.5 bits (371), Expect = 2.2e-31 Identity = 103/366 (28.14%), Postives = 175/366 (47.81%), Query Frame = 0
BLAST of Lcy09g012510 vs. NCBI nr
Match: ABA98898.1 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-29 Identity = 86/283 (30.39%), Postives = 143/283 (50.53%), Query Frame = 0
BLAST of Lcy09g012510 vs. NCBI nr
Match: ABA98898.1 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]) HSP 1 Score: 52.4 bits (124), Expect = 9.5e-03 Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0
HSP 2 Score: 139.4 bits (350), Expect = 5.9e-29 Identity = 86/271 (31.73%), Postives = 138/271 (50.92%), Query Frame = 0
BLAST of Lcy09g012510 vs. NCBI nr
Match: GAU33706.1 (hypothetical protein TSUD_148570 [Trifolium subterraneum]) HSP 1 Score: 138.3 bits (347), Expect = 1.3e-28 Identity = 87/271 (32.10%), Postives = 140/271 (51.66%), Query Frame = 0
BLAST of Lcy09g012510 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 1.1e-12 Identity = 65/282 (23.05%), Postives = 118/282 (41.84%), Query Frame = 0
BLAST of Lcy09g012510 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 49.7 bits (117), Expect = 5.7e-06 Identity = 38/148 (25.68%), Postives = 61/148 (41.22%), Query Frame = 0
BLAST of Lcy09g012510 vs. TAIR 10
Match: AT1G33710.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04 Identity = 33/145 (22.76%), Postives = 62/145 (42.76%), Query Frame = 0
BLAST of Lcy09g012510 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 43.1 bits (100), Expect = 5.4e-04 Identity = 21/80 (26.25%), Postives = 42/80 (52.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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