Lcy09g009250 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g009250
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	formin-like protein 3
Location	Chr09: 9305167 .. 9307479 (-)
RNA-Seq Expression	Lcy09g009250
Synteny	Lcy09g009250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTCTCAAATCCCTCCTCTTTCTCACTTTCCTCTTCCTAATTTCCTCCTACTCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCTCGACGACACCGCCGTCCCGACCACCCCCGCCGACCCCACCGTCAAGTGTGCCCCATGCGAACAAAACCCCCCATCTCCGCCGCCGCCGGTCTACCCCTCGCCGCCTCCGCCGTCTCCTCCGCCGCCCGACGTCCTCCCCTACTACTCTCCCCCACCCCCCAAGAAGAAGGACCACAAGGACACCAACTGTCCCCCGCCACCGCCGTCCTCCTTCACCTACATAACTGGCCCTCCCGGCGAACTCTATCCCATCGACGAAAACTATAACGCCGCCGGCCGGAGATCCGCCGCCGCCGCCGTGGTTGGGTTGGCTTTGGCTGGGCTTCTGCTGGGTTAAAGCGGTGGGATCTCAATCGAATTTCTCGTTGAGGTAAAAGTGAAACTGAATTCTCTCTACGAGATTTTTTGTTTGGGATTTGTTTTAGAATTTTTATGGATCGATCGTCGTCATTTTCTTGGCTAATAATTTTGTAATTTGTACTAAAATATTTAATTGTCCAGAAATTTGTGATCAGAAAAGATAATTTCTGTGTTTTTTGTTTACCATATTTCCCAAATTTATTTTTCCTCTCTTATTATTATTCAATCAAAATAAGAAAAATTAGGTCACATATTTTAATTTTTGGGATTATAACTTTTCTTTTTTCTTATTCGATATGAATGGATTCGATTCAATCGTTATCATCTCTTAGCCACATAATTGAATTATACTAATATTATAGTTAAATCAATGACGTCTTATTGACAAGATTTCACCTAAAATAAGAATTATTTTTTTTTTTTGAGAAAAATAATAATTGTATATTAATTTGTGTTTTGTAGTGACAATTGACAAAACCATTACTTTTTTTTTTTTTTTTTTTCAGATTTTAATAATCTCGGATGGCCATAAGAAAAAAAAAAAAACCCTGTAGCTTAATCACCAGATCAATTTATGAGTGAAATATTAGCTTTTGCTTATAATGAAATTACCTTCATATTAAAAAGGGGAAAATAAAAAGGGATTGGCAATAACGAAATAGAAGAATTTATGAGATTTTTGTATAGATTTTTTAAAATTAAGCACGAATTACAAGAGGAAAAAATGCCACCAATGAAATAAAAATAATTATTTATTGTTACTTTTTTTTTAATGAAAATGATATAATGTTGGATTATCTAGAGAAATCCATTAACAGACGATTCCGAAAATGATTTGTCATTTGGGCCCCTCGGTTGTTAAAATGCTACTTGCATCATCCCTACTATATAAATATTCCCAAACGGTGTCGTTTTCACACCCAAATAATAATAATAATAAAATCCTTATGGTCAGAGGTACAAACTTTAAATCAACTAAATTTTATCAATTTAACAGTTACTAATCTACGGTCTAAGTTTGAAAATTTTAAAACAGACAGTCACTAATCCATCAACTAAGTTGATCGATTTAAAAAGTGAAAGCGCGCCAATTTAAATTATAGCATATCTACACCAAGTTGACTGCGTGCAATTTTTAAATATCAAATTTATTCATCTCTTTATCTTTCCTTTTATTTTGTTTTATTTTTAAAATAACAAAACTCAAAATATTTATCAATTTCTTATAACTTTAAATTAAAACTAGGATTCTGAAATTTGAAAATTCCACTAATTTAGTGAATATTATGAACAAACAATTTTAATCAATTTTGAGGGATACATACAAATATTAGACAAATAAAAACAAAATGTTTTTTAAAAAAGTAAAGAATAAAATAAAAATGAAGGTTAGTGGAATAAGGAACTCGGTAGCACCGGCCAAAGCGAGTGGAGGGCAAAAGAGTAAATTGAGTAAGTGGGCCTGATGATTGCGGTGGCGACACGCGTCGAGTTCAATTTCCAAGGTGGAATTGCGTATTGTACTTTAAAATGGGGACCCGATCCCGAGCCGTTGGATCGGGTGTCAGAGAGTTCTTTGAGATGCGATTGGATCAGGTGTCGGTTAATTCTGCATTCCTAGGACGATCATCTTCGGTTTCACCAAAGTGCGGCCCCACCTGATTTCTTTCTCCCCATGCCTCTCCAATTTTATTTTTCCCCCCTATTTTTTTTTTATATTACACGTCATTATCCACGTGTCTCTCCATCTTTCTCCTCCTCCACCTTTACTCAAACTCAAAAGTGACTTTTTTGGTTAATTTGTCTTGTTTTTCCTCTTCCAATGCATTGAAAAATGTTACTTGTCTACCAATATATATGAATA

mRNA sequence

ATGCTTCCTCTCAAATCCCTCCTCTTTCTCACTTTCCTCTTCCTAATTTCCTCCTACTCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCTCGACGACACCGCCGTCCCGACCACCCCCGCCGACCCCACCGTCAAGTGTGCCCCATGCGAACAAAACCCCCCATCTCCGCCGCCGCCGGTCTACCCCTCGCCGCCTCCGCCGTCTCCTCCGCCGCCCGACGTCCTCCCCTACTACTCTCCCCCACCCCCCAAGAAGAAGGACCACAAGGACACCAACTGTCCCCCGCCACCGCCGTCCTCCTTCACCTACATAACTGGCCCTCCCGGCGAACTCTATCCCATCGACGAAAACTATAACGCCGCCGGCCGGAGATCCGCCGCCGCCGCCGTGGTTGGGTTGGCTTTGGCTGGGCTTCTGCTGGGTTAAAGCGGTGGGATCTCAATCGAATTTCTCGTTGAGATTTTAATAATCTCGGATGGCCATAAGAAAAAAAAAAAAACCCTGTAGCTTAATCACCAGATCAATTTATGAGTGAAATATTAGCTTTTGCTTATAATGAAATTACCTTCATATTAAAAAGGGGAAAATAAAAAGGGATTGGCAATAACGAAATAGAAGAATTTATGAGATTTTTGTATAGATTTTTTAAAATTAAGCACGAATTACAAGAGGAAAAAATGCCACCAATGAAATAAAAATAATTATTTATTGTTACTTTTTTTTTAATGAAAATGATATAATGTTGGATTATCTAGAGAAATCCATTAACAGACGATTCCGAAAATGATTTGTCATTTGGGCCCCTCGGTTGTTAAAATGCTACTTGCATCATCCCTACTATATAAATATTCCCAAACGGTGTCGTTTTCACACCCAAATAATAATAATAATAAAATCCTTATGGTCAGAGGTACAAACTTTAAATCAACTAAATTTTATCAATTTAACAGTTACTAATCTACGGTCTAAGTTTGAAAATTTTAAAACAGACAGTCACTAATCCATCAACTAAGTTGATCGATTTAAAAAGTGAAAGCGCGCCAATTTAAATTATAGCATATCTACACCAAGTTGACTGCGTGCAATTTTTAAATATCAAATTTATTCATCTCTTTATCTTTCCTTTTATTTTGTTTTATTTTTAAAATAACAAAACTCAAAATATTTATCAATTTCTTATAACTTTAAATTAAAACTAGGATTCTGAAATTTGAAAATTCCACTAATTTAGTGAATATTATGAACAAACAATTTTAATCAATTTTGAGGGATACATACAAATATTAGACAAATAAAAACAAAATGTTTTTTAAAAAAGTAAAGAATAAAATAAAAATGAAGGTTAGTGGAATAAGGAACTCGGTAGCACCGGCCAAAGCGAGTGGAGGGCAAAAGAGTAAATTGAGTAAGTGGGCCTGATGATTGCGGTGGCGACACGCGTCGAGTTCAATTTCCAAGGTGGAATTGCGTATTGTACTTTAAAATGGGGACCCGATCCCGAGCCGTTGGATCGGGTGTCAGAGAGTTCTTTGAGATGCGATTGGATCAGGTGTCGGTTAATTCTGCATTCCTAGGACGATCATCTTCGGTTTCACCAAAGTGCGGCCCCACCTGATTTCTTTCTCCCCATGCCTCTCCAATTTTATTTTTCCCCCCTATTTTTTTTTTATATTACACGTCATTATCCACGTGTCTCTCCATCTTTCTCCTCCTCCACCTTTACTCAAACTCAAAAGTGACTTTTTTGGTTAATTTGTCTTGTTTTTCCTCTTCCAATGCATTGAAAAATGTTACTTGTCTACCAATATATATGAATA

Coding sequence (CDS)

ATGCTTCCTCTCAAATCCCTCCTCTTTCTCACTTTCCTCTTCCTAATTTCCTCCTACTCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCTCGACGACACCGCCGTCCCGACCACCCCCGCCGACCCCACCGTCAAGTGTGCCCCATGCGAACAAAACCCCCCATCTCCGCCGCCGCCGGTCTACCCCTCGCCGCCTCCGCCGTCTCCTCCGCCGCCCGACGTCCTCCCCTACTACTCTCCCCCACCCCCCAAGAAGAAGGACCACAAGGACACCAACTGTCCCCCGCCACCGCCGTCCTCCTTCACCTACATAACTGGCCCTCCCGGCGAACTCTATCCCATCGACGAAAACTATAACGCCGCCGGCCGGAGATCCGCCGCCGCCGCCGTGGTTGGGTTGGCTTTGGCTGGGCTTCTGCTGGGTTAA

Protein sequence

MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLLG

Homology

[Close]

BLAST of Lcy09g009250 vs. ExPASy TrEMBL
Match: A0A1S3CT22 (extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.6e-46
Identity = 112/141 (79.43%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP- 60
           MLPLK LLFL FL LIS  SA  +A  RRLDDT   TTP DP VKCAPCEQNPPSPPPP 
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPL 60

Query: 61  VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYN 120
           VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K+ NCPPPP  SF YITGPPG+LYPID+NYN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYN 120

Query: 121 AAGRRSAAAAVVGLALAGLLL 141
           AAGRRSAAAA VG+ LAGLLL
Sbjct: 121 AAGRRSAAAAAVGVVLAGLLL 138

[Close]

BLAST of Lcy09g009250 vs. ExPASy TrEMBL
Match: A0A0A0KPJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.8e-43
Identity = 109/141 (77.30%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP- 60
           MLPLK LLFL FL LIS  SA  +   RRLDDT   TTP DP VKCAPCEQNPPSPPPP 
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPV 60

Query: 61  VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYN 120
           VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K  NCPPPP  SF YITGPPG+LYPID+ YN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYN 120

Query: 121 AAGRRSAAAAVVGLALAGLLL 141
           AAGRRS AA VVG+ LAGLLL
Sbjct: 121 AAGRRS-AATVVGVVLAGLLL 137

[Close]

BLAST of Lcy09g009250 vs. ExPASy TrEMBL
Match: A0A6J1JNW0 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111487018 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.4e-41
Identity = 105/144 (72.92%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPP 60
           MLP  SLLFLT L LIS   ++++AA RRLDDT V  TPADPTVKC+PCEQNPPS PPPP
Sbjct: 1   MLPFNSLLFLTLLLLIS--PSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPP 60

Query: 61  VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYN 120
           VYPSPPPPSPPPPDV+ YYSPPPP KKDHK+ +CPPPP  +F YITGPPG+LYPID+NYN
Sbjct: 61  VYPSPPPPSPPPPDVVVYYSPPPP-KKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYN 120

Query: 121 AAGRR---SAAAAVVGLALAGLLL 141
           AA RR   +AA+AV+GLA+AG+L+
Sbjct: 121 AAARRLVSAAASAVIGLAVAGVLM 141

[Close]

BLAST of Lcy09g009250 vs. ExPASy TrEMBL
Match: A0A6J1DDL2 (acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.1e-39
Identity = 110/147 (74.83%), Postives = 122/147 (82.99%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLIS-SYSAAAAAAARRLDDT-AVPTTPADPTVKCAPCEQNPPS-PP 60
           MLPLKSLLFL  L LIS S +AAA+AAAR LD+  AVP+T  DPTVKCAPC+QNPPS PP
Sbjct: 1   MLPLKSLLFLNLLLLISPSATAAASAAARFLDEAPAVPSTTGDPTVKCAPCDQNPPSPPP 60

Query: 61  PPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPP-PSSFTYITGPPGELYPIDE 120
           PP+YPSPPPPSPPPPDVLPYYSPPPPKK  + D NCPPPP P SFTYITGPPG+LYPID+
Sbjct: 61  PPIYPSPPPPSPPPPDVLPYYSPPPPKKPKNND-NCPPPPYPPSFTYITGPPGDLYPIDQ 120

Query: 121 NYNAAGR---RSAAAAVVGLALAGLLL 141
           +YNAA R    +AAAAVVGL L GL +
Sbjct: 121 DYNAAARTLTSAAAAAVVGLGLVGLFV 146

[Close]

BLAST of Lcy09g009250 vs. ExPASy TrEMBL
Match: A0A6J1GMY1 (extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38
Identity = 102/144 (70.83%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPP 60
           MLP  SLLFL  L LIS   ++++AA RRLDD     TPADPTVKC+PCEQNPPS PPPP
Sbjct: 1   MLPFNSLLFLALLLLIS--PSSSSAAVRRLDD-----TPADPTVKCSPCEQNPPSPPPPP 60

Query: 61  VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYN 120
           VYPSPPPPSPPPPDV+ YYSPPPP KKDHK+ +CPPPP  +F YITGPPG+LYPID++YN
Sbjct: 61  VYPSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYN 120

Query: 121 AAGRR---SAAAAVVGLALAGLLL 141
           AA RR   +AA+AVVGLA+AG+L+
Sbjct: 121 AASRRLVSTAASAVVGLAVAGVLM 137

[Close]

BLAST of Lcy09g009250 vs. NCBI nr
Match: XP_008467156.1 (PREDICTED: extensin-like [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45
Identity = 112/141 (79.43%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP- 60
           MLPLK LLFL FL LIS  SA  +A  RRLDDT   TTP DP VKCAPCEQNPPSPPPP 
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPL 60

Query: 61  VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYN 120
           VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K+ NCPPPP  SF YITGPPG+LYPID+NYN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYN 120

Query: 121 AAGRRSAAAAVVGLALAGLLL 141
           AAGRRSAAAA VG+ LAGLLL
Sbjct: 121 AAGRRSAAAAAVGVVLAGLLL 138

[Close]

BLAST of Lcy09g009250 vs. NCBI nr
Match: XP_004150475.1 (leucine-rich repeat extensin-like protein 6 [Cucumis sativus] >KGN51515.1 hypothetical protein Csa_009313 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-42
Identity = 109/141 (77.30%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP- 60
           MLPLK LLFL FL LIS  SA  +   RRLDDT   TTP DP VKCAPCEQNPPSPPPP 
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPV 60

Query: 61  VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYN 120
           VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K  NCPPPP  SF YITGPPG+LYPID+ YN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYN 120

Query: 121 AAGRRSAAAAVVGLALAGLLL 141
           AAGRRS AA VVG+ LAGLLL
Sbjct: 121 AAGRRS-AATVVGVVLAGLLL 137

[Close]

BLAST of Lcy09g009250 vs. NCBI nr
Match: XP_022989990.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40
Identity = 105/144 (72.92%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPP 60
           MLP  SLLFLT L LIS   ++++AA RRLDDT V  TPADPTVKC+PCEQNPPS PPPP
Sbjct: 1   MLPFNSLLFLTLLLLIS--PSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPP 60

Query: 61  VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYN 120
           VYPSPPPPSPPPPDV+ YYSPPPP KKDHK+ +CPPPP  +F YITGPPG+LYPID+NYN
Sbjct: 61  VYPSPPPPSPPPPDVVVYYSPPPP-KKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYN 120

Query: 121 AAGRR---SAAAAVVGLALAGLLL 141
           AA RR   +AA+AV+GLA+AG+L+
Sbjct: 121 AAARRLVSAAASAVIGLAVAGVLM 141

[Close]

BLAST of Lcy09g009250 vs. NCBI nr
Match: XP_022152315.1 (acrosin [Momordica charantia])

HSP 1 Score: 171.8 bits (434), Expect = 4.3e-39
Identity = 110/147 (74.83%), Postives = 122/147 (82.99%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLIS-SYSAAAAAAARRLDDT-AVPTTPADPTVKCAPCEQNPPS-PP 60
           MLPLKSLLFL  L LIS S +AAA+AAAR LD+  AVP+T  DPTVKCAPC+QNPPS PP
Sbjct: 1   MLPLKSLLFLNLLLLISPSATAAASAAARFLDEAPAVPSTTGDPTVKCAPCDQNPPSPPP 60

Query: 61  PPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPP-PSSFTYITGPPGELYPIDE 120
           PP+YPSPPPPSPPPPDVLPYYSPPPPKK  + D NCPPPP P SFTYITGPPG+LYPID+
Sbjct: 61  PPIYPSPPPPSPPPPDVLPYYSPPPPKKPKNND-NCPPPPYPPSFTYITGPPGDLYPIDQ 120

Query: 121 NYNAAGR---RSAAAAVVGLALAGLLL 141
           +YNAA R    +AAAAVVGL L GL +
Sbjct: 121 DYNAAARTLTSAAAAAVVGLGLVGLFV 146

[Close]

BLAST of Lcy09g009250 vs. NCBI nr
Match: XP_023520933.1 (extensin [Cucurbita pepo subsp. pepo] >XP_023521360.1 extensin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.0 bits (432), Expect = 7.3e-39
Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 1   MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS--PPP 60
           MLP  SLLFLT L LIS   ++++AA RRLDD     TP DPTVKC+PCEQNPPS  PPP
Sbjct: 1   MLPFNSLLFLTLLLLIS--PSSSSAAVRRLDD-----TPTDPTVKCSPCEQNPPSPPPPP 60

Query: 61  PVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENY 120
           PVYPSPPPPSPPPPDV+ YYSPPPP KKDHK+ +CPPPP  +F YITGPPG+LYPID+NY
Sbjct: 61  PVYPSPPPPSPPPPDVVIYYSPPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNY 120

Query: 121 NAAGRR---SAAAAVVGLALAGLLL 141
           NAA RR   +AA+AV+GLA+AG+L+
Sbjct: 121 NAAARRLVSAAASAVIGLAVAGVLM 138

[Close]

BLAST of Lcy09g009250 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-14
Identity = 62/124 (50.00%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 18  SYSAAAAAAARRLDDTAVPTTPADPTVKCAP-CEQNPPSPPPPVYPSPPPPSPPPPDVLP 77
           S S+ A+  AR+LD+        DP +KC+P C QNPP P PP  PSPPPP+ PPP  LP
Sbjct: 31  SSSSDASLEARKLDE-------VDP-IKCSPSCIQNPPPPSPPP-PSPPPPACPPPPALP 90

Query: 78  YYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYN-AAGRRSAAAAVVGLAL 137
              PPPPKK     + CPPPPP++F YITGPPG LYP+DE +  AAG+      + GL  
Sbjct: 91  ---PPPPKK---VSSYCPPPPPANFLYITGPPGNLYPVDEQFGAAAGKSFMVVKLSGLIA 139

Query: 138 AGLL 140
            G++
Sbjct: 151 FGIM 139

[Close]

BLAST of Lcy09g009250 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 61.6 bits (148), Expect = 5.8e-10
Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 4   LKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQN--PPSPPPPVY 63
           L +++FLTF  +I   +A+ ++  R+L++        DP +KC PC QN  PPSPPP   
Sbjct: 54  LTTVVFLTFPMII---NASDSSTNRKLEE--------DP-IKCTPCLQNIPPPSPPP--- 113

Query: 64  PSPPPPS---PPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENY 123
           PSPPPPS   PPPP  LP   P PPKK     + C PPPPS++ Y+TGPPGELYPID+ +
Sbjct: 114 PSPPPPSQACPPPP--LP---PSPPKK-----SYC-PPPPSTYIYMTGPPGELYPIDQQF 169

Query: 124 NAAGRRS-AAAAVVGLALAGLL 140
            AA  +S     + GL   G++
Sbjct: 174 GAAVTKSFTVVKISGLIAFGVM 169

[Close]

BLAST of Lcy09g009250 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.9e-06
Identity = 47/90 (52.22%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 40  ADPTVKCAPCEQN----PPSPPPP-VYPSPPPPSPPPP---DVLPYYSPPPPKKKDHKDT 99
           A+  V C PC QN    PPSPPPP   PSPPPPSPPPP      P   PPPP        
Sbjct: 35  AEVDVNCIPCLQNQPPPPPSPPPPSCTPSPPPPSPPPPKKSSCPPSPLPPPPP------- 94

Query: 100 NCPPPPPSSFTYITGPPGELYPIDENYNAA 122
             PPPP   FTY   PPG+LYPI+  Y AA
Sbjct: 95  --PPPPNYVFTY---PPGDLYPIENYYGAA 112

The following BLAST results are available for this feature:

BLAST of Lcy09g009250 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g009250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CT22	6.6e-46	79.43	extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1	[more]
A0A0A0KPJ1	6.8e-43	77.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1	[more]
A0A6J1JNW0	6.4e-41	72.92	leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1DDL2	2.1e-39	74.83	acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1	[more]
A0A6J1GMY1	1.3e-38	70.83	extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1	[more]

BLAST of Lcy09g009250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467156.1	1.4e-45	79.43	PREDICTED: extensin-like [Cucumis melo]	[more]
XP_004150475.1	1.4e-42	77.30	leucine-rich repeat extensin-like protein 6 [Cucumis sativus] >KGN51515.1 hypoth...	[more]
XP_022989990.1	1.3e-40	72.92	leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]	[more]
XP_022152315.1	4.3e-39	74.83	acrosin [Momordica charantia]	[more]
XP_023520933.1	7.3e-39	70.34	extensin [Cucurbita pepo subsp. pepo] >XP_023521360.1 extensin-like [Cucurbita p...	[more]

BLAST of Lcy09g009250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23040.1	2.3e-14	50.00	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70990.1	5.8e-10	45.77	proline-rich family protein	[more]
AT1G02405.1	3.9e-06	52.22	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..106
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 6..139
None	No IPR available	PANTHER	PTHR35094:SF1	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 6..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g009250.1	Lcy09g009250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane