Lcy03g005760 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g005760
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
LocationChr03: 31552293 .. 31553775 (+)
RNA-Seq ExpressionLcy03g005760
SyntenyLcy03g005760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCTCAACGACGGCACATCAATGATCATGAGTTGGTTGGACGACCATATGGCTCACGGTATGTTAATCGATTTAATATTTTTTGTTAAGCAAGCTTAATGTTCTTATATCAATTGTTAGAATTAACTTTAATTGTAATGTTCAATATAGATGGAGAGATCAATTTTGTGTTACTGGGTCGGCTACACATGTACTGATCCAATATAGATACATGTTGGATCTCTTGAAACCTACTCTGGTACGTGTTTACTATAATAGAATTTTAAAATATTTTTCTTTCCTTCACTCCTAACAAATTTTTTACGTTGTGGTGTTGCAGATGATTTGGGAGCCATATAAGGATGTCATGACCACTTTACCTACTTATTGTAGAAATGGTCATGACATTTGGCGAACAGTAAGTCCACTCATATGCTTCCATATCATCGAGTGGCATCTGCCGAATAGGTTAATGAGACAGTTTGGCATGATAGAAAATGTGCCAATCAATTGCAACACAAATCCATCGCTACATGAAATTGATCTTCGAAATGGTGATTGGCCGACCAAGCATGCACCGTATGTAAAGCGATGGCACTCACGAAGAGGTTTCATTGCAGTCAATTCTTTAGTGGATGCTAATGTAGATACTAGTCCAGACTACATGCCCTGGTATGAAAATATTACTAGGCGCTACATCACCCGTGAGGGAGTTTCTTATGGTCAAGCGGTACGAATTTCAATTAATTTTTTTAAAAAAAAATTCATGATTCAAAATATAAATATTCCTTAATTTATAATATTATTGTTCAAAGAACATGTTTCAGACGGATTCGTGATATATCAGAAGATCTACAAATCCTTAACTTGTGCGACAGTGATGAGATAAACATGGAGCAACTCCAGTATATGTATCACATACCTATTCCACCTCCTCGTGGTCCTAGACGTAGACGACAGGCTCAGGTTCAAGAGGAAGAGATTCCAATGCATGAACAACCATTCCTAGATCAACCTGACCAAATTCACCATAATGTCGAGGACATACCGCCTTTCACACAGACGCAGGATGGTGTCGATCCTTCCATCCCATATCAACCTGACCAGATTCACCATAATGTCGAGGACATACCGCCTTTCACTCAGACACAGGATGGTGGTGTTGATCCTTCCACCCCAGTGATGATGATGTCGGCTTCAGGTACACAGTATCTTGACACACCAGTTCCACCACTCTATTATGATTCAGAGGCTGGTCCCTCGTCGTCATATGAAGCTAGTACACAATTTCTGCACATACCAATTCTACCACTCCATCATGATTTAGAGGTTGGCCCCTTGTCGTCATATGAGGTTGGACCCTCATCATCATATGTTCACGGACGTGGTCGTGGACGTGGTGAGCATGCACAATATTTCTATCCTACAGAGTCTATAGATGAAGCAGGGGAGCAAGAGGAACAAGAGGAACCAGATCAGGCACTAAGGGGTCGTCGTTGA

mRNA sequence

ATGGCTCCTCAACGACGGCACATCAATGATCATGAGTTGGTTGGACGACCATATGGCTCACGAAATGGTCATGACATTTGGCGAACAGTAAGTCCACTCATATGCTTCCATATCATCGAGTGGCATCTGCCGAATAGGTTAATGAGACAGTTTGGCATGATAGAAAATGTGCCAATCAATTGCAACACAAATCCATCGCTACATGAAATTGATCTTCGAAATGGTGATTGGCCGACCAAGCATGCACCGTATGTAAAGCGATGGCACTCACGAAGAGGTTTCATTGCAGTCAATTCTTTAGTGGATGCTAATGTAGATACTAGTCCAGACTACATGCCCTGGTATGAAAATATTACTAGGCGCTACATCACCCAAGATCTACAAATCCTTAACTTGTGCGACAGTGATGAGATAAACATGGAGCAACTCCAGTATATGTATCACATACCTATTCCACCTCCTCGTGGTCCTAGACGTAGACGACAGGCTCAGGTTCAAGAGGAAGAGATTCCAATGCATGAACAACCATTCCTAGATCAACCTGACCAAATTCACCATAATGTCGAGGACATACCGCCTTTCACACAGACGCAGGATGGTGTCGATCCTTCCATCCCATATCAACCTGACCAGATTCACCATAATGTCGAGGACATACCGCCTTTCACTCAGACACAGGATGGTGGTGTTGATCCTTCCACCCCAGTGATGATGATGTCGGCTTCAGGTACACAGTATCTTGACACACCAGTTCCACCACTCTATTATGATTCAGAGGCTGGTCCCTCGTCGTCATATGAAGCTAGTACACAATTTCTGCACATACCAATTCTACCACTCCATCATGATTTAGAGGTTGGCCCCTTGTCGTCATATGAGGTTGGACCCTCATCATCATATGTTCACGGACGTGGTCGTGGACGTGGTGAGCATGCACAATATTTCTATCCTACAGAGTCTATAGATGAAGCAGGGGAGCAAGAGGAACAAGAGGAACCAGATCAGGCACTAAGGGGTCGTCGTTGA

Coding sequence (CDS)

ATGGCTCCTCAACGACGGCACATCAATGATCATGAGTTGGTTGGACGACCATATGGCTCACGAAATGGTCATGACATTTGGCGAACAGTAAGTCCACTCATATGCTTCCATATCATCGAGTGGCATCTGCCGAATAGGTTAATGAGACAGTTTGGCATGATAGAAAATGTGCCAATCAATTGCAACACAAATCCATCGCTACATGAAATTGATCTTCGAAATGGTGATTGGCCGACCAAGCATGCACCGTATGTAAAGCGATGGCACTCACGAAGAGGTTTCATTGCAGTCAATTCTTTAGTGGATGCTAATGTAGATACTAGTCCAGACTACATGCCCTGGTATGAAAATATTACTAGGCGCTACATCACCCAAGATCTACAAATCCTTAACTTGTGCGACAGTGATGAGATAAACATGGAGCAACTCCAGTATATGTATCACATACCTATTCCACCTCCTCGTGGTCCTAGACGTAGACGACAGGCTCAGGTTCAAGAGGAAGAGATTCCAATGCATGAACAACCATTCCTAGATCAACCTGACCAAATTCACCATAATGTCGAGGACATACCGCCTTTCACACAGACGCAGGATGGTGTCGATCCTTCCATCCCATATCAACCTGACCAGATTCACCATAATGTCGAGGACATACCGCCTTTCACTCAGACACAGGATGGTGGTGTTGATCCTTCCACCCCAGTGATGATGATGTCGGCTTCAGGTACACAGTATCTTGACACACCAGTTCCACCACTCTATTATGATTCAGAGGCTGGTCCCTCGTCGTCATATGAAGCTAGTACACAATTTCTGCACATACCAATTCTACCACTCCATCATGATTTAGAGGTTGGCCCCTTGTCGTCATATGAGGTTGGACCCTCATCATCATATGTTCACGGACGTGGTCGTGGACGTGGTGAGCATGCACAATATTTCTATCCTACAGAGTCTATAGATGAAGCAGGGGAGCAAGAGGAACAAGAGGAACCAGATCAGGCACTAAGGGGTCGTCGTTGA

Protein sequence

MAPQRRHINDHELVGRPYGSRNGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLRNGDWPTKHAPYVKRWHSRRGFIAVNSLVDANVDTSPDYMPWYENITRRYITQDLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIPMHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVDPSTPVMMMSASGTQYLDTPVPPLYYDSEAGPSSSYEASTQFLHIPILPLHHDLEVGPLSSYEVGPSSSYVHGRGRGRGEHAQYFYPTESIDEAGEQEEQEEPDQALRGRR
Homology
BLAST of Lcy03g005760 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-21
Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 0

Query: 22  NGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLRNG---DWP 81
           +G +IWRTV+PLICF ++EWH P+R++RQFG+ + +P  C+   +LH ID R     DW 
Sbjct: 338 SGENIWRTVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWS 397

Query: 82  TKHAPYVKRWHSRRGFIAVNSLVDANVDTSPDYMPWYENITRRYIT 125
            +H+ ++  W +R   +       + +D +  YM WY  ITRR I+
Sbjct: 398 ARHSRHIGLWEARVSSVVSGEPECSPMDYNDPYMEWYRRITRRIIS 443

BLAST of Lcy03g005760 vs. ExPASy Swiss-Prot
Match: Q9LMT7 (Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.0e-04
Identity = 35/116 (30.17%), Postives = 58/116 (50.00%), Query Frame = 0

Query: 28  RTVSPLICFHIIEWHLPNRLMRQFGMIENVP--INCNTNPSLHEIDLRNGDWPTKHAPYV 87
           R+ + LI   ++EWH P+R M+QFG+ + +P  +    N   H+ DL   D  T      
Sbjct: 311 RSRTKLIGPKVVEWHFPDRCMKQFGLCQVIPGEVPPRKNEKNHDEDLLE-DMNTAD---- 370

Query: 88  KRWHSRRGFIAVNSLVDANVDTSPDYMPWYENITRRYITQDLQILNLCDSDEINME 142
           + W  RR  I  N     N D S +YM W+ +IT   + +D  +    ++D +N++
Sbjct: 371 EEWMRRRENIVENG--GGNGDES-EYMQWFNSITVPKLHRDTSL----EADIMNVQ 414

BLAST of Lcy03g005760 vs. ExPASy TrEMBL
Match: A0A5A7SU33 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00810 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-50
Identity = 137/376 (36.44%), Postives = 191/376 (50.80%), Query Frame = 0

Query: 1   MAPQRRHINDHELVGRPYGSR----------------------------NGHDIWRTVSP 60
           +APQ  H+N ++L GR YGSR                            NGH+IWRT+SP
Sbjct: 418 VAPQLLHVNANQLHGRAYGSRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISP 477

Query: 61  LICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLRNGDWPTKHAPYVKRWHSRR 120
           LICF+I EWH P+R++RQFG+ + VP +CNT P L  IDLR  DW  + A  V RWH+RR
Sbjct: 478 LICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLQNIDLRTADWSDRVAHLVMRWHNRR 537

Query: 121 GFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ-----DLQILNLCDSDEINMEQLQYM 180
            F A    ++  ++D + +Y+ WY+NI++ YITQ        +LN+C+ +E  ME + YM
Sbjct: 538 RFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLVLNICNDNEQYMENIHYM 597

Query: 181 YHIPIPPPRGPRRRRQAQVQEEEIPMHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIP 240
           Y +PI P   P +RR+  VQE           DQ +++  + E++PP TQTQ        
Sbjct: 598 YDVPIVP--APVQRRRPLVQEP----------DQLEEVDQHGEEVPPMTQTQS------- 657

Query: 241 YQPDQIHHNVEDIPPFTQTQDGGVDPSTPVMMMSASGTQYLDTPVPPL------YYDSEA 300
                  HN                  +PVMMM   GT Y D+ V         YY+SEA
Sbjct: 658 ------EHNY----------------VSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEA 717

Query: 301 GPSSSYEASTQFLHIPILPLHHDLEVGPLSSYEVG--PSSSYVHGRGRGRGEHAQYFY-- 332
           G SS+ +   Q+                   Y++G  PSSSY+HG GRGRGEH +Y Y  
Sbjct: 718 GQSST-DFGQQY-------------------YDLGSDPSSSYMHGHGRGRGEHNEYLYYE 732

BLAST of Lcy03g005760 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48
Identity = 139/411 (33.82%), Postives = 193/411 (46.96%), Query Frame = 0

Query: 1   MAPQRRHINDHELVGRPYGSR--------------------------------------- 60
           +APQ  H+N ++L GR YGSR                                       
Sbjct: 234 VAPQLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVI 293

Query: 61  --------NGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLR 120
                   NGH+IWRT+SPLICF+I EWH P+R++RQFG+ + VP +CNT P LH IDLR
Sbjct: 294 DSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLR 353

Query: 121 NGDWPTKHAPYVKRWHSRRGFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ------- 180
             DW  + A  V RWH+RR F A    ++  ++D + +Y+ WY+NI++ YITQ       
Sbjct: 354 TADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSH 413

Query: 181 --------------DLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIP 240
                           Q+LN+C+ +E  ME + YMY +PI P   P +RR+  VQE    
Sbjct: 414 LRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVP--APVQRRRPLVQEP--- 473

Query: 241 MHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVD 300
                  DQ +++  + E++PP TQTQ               HN                
Sbjct: 474 -------DQLEEVDQHGEEVPPMTQTQS-------------EHNY--------------- 533

Query: 301 PSTPVMMMSASGTQYLDTPVPPL------YYDSEAGPSSSYEASTQFLHIPILPLHHDLE 332
             +PVMMM   GT Y D+ V         YY+SEAG SS+ +   Q+             
Sbjct: 534 -VSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSST-DFGQQY------------- 583

BLAST of Lcy03g005760 vs. ExPASy TrEMBL
Match: A0A5A7U115 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold199G00010 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 5.9e-48
Identity = 127/347 (36.60%), Postives = 179/347 (51.59%), Query Frame = 0

Query: 17  PYGSRNGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLRNGD 76
           P+   NGHDIWRT+SPLICF+I EWH P+R++RQF + + VP +CNT P LH IDLR+ D
Sbjct: 599 PHFCTNGHDIWRTISPLICFYIGEWHHPDRVLRQFSIQQVVPRDCNTEPLLHNIDLRSSD 658

Query: 77  WPTKHAPYVKRWHSRRGFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ---------- 136
           W  + A  V +WH+RR F      ++  ++  + +Y+ WY+NIT+ YITQ          
Sbjct: 659 WSDRVAYLVMQWHNRRRFTTTEPPIEQFDMYVTQEYIHWYKNITKLYITQLGAAMSHLNV 718

Query: 137 ---DLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIPMHEQPFLDQPD 196
                Q+LN+C+ +E  ME + YMY +PI P    RRR               P + +PD
Sbjct: 719 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPALVQRRR---------------PLVQEPD 778

Query: 197 QIHHN---VEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVDPSTPVMMM 256
           Q+  N   VE++PP T T                         TQT    V   +PVMMM
Sbjct: 779 QLEENDQHVEEVPPVTLT------------------------LTQTDHSYV---SPVMMM 838

Query: 257 SASGTQYLDTPVPPL------YYDSEAGPSSSYEASTQFLHIPILPLHHDLEVGPLSSYE 316
              GT Y D+ V         YY+SEAG SS+ +   Q+                   Y+
Sbjct: 839 PTFGTTYYDSGVGQSSDFGRGYYNSEAGRSST-DFGQQY-------------------YD 883

Query: 317 VG--PSSSYVHGRGRGRGEHAQYFY---PTESIDEAGEQEEQEEPDQ 336
           +G  PSSSY+HG GRGRGEH +Y Y   P   ++++ EQ++Q+  ++
Sbjct: 899 LGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEE 883

BLAST of Lcy03g005760 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 8.5e-47
Identity = 139/419 (33.17%), Postives = 193/419 (46.06%), Query Frame = 0

Query: 1    MAPQRRHINDHELVGRPYGSR--------------------------------------- 60
            +APQ  H+N ++L GR YGSR                                       
Sbjct: 882  VAPQLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVI 941

Query: 61   --------NGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLR 120
                    NGH+IWRT+SPLICF+I EWH P+R++RQFG+ + VP +CNT P LH IDLR
Sbjct: 942  DSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLR 1001

Query: 121  NGDWPTKHAPYVKRWHSRRGFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ------- 180
              DW  + A  V RWH+RR F A    ++  ++D + +Y+ WY+NI++ YITQ       
Sbjct: 1002 TADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSH 1061

Query: 181  --------------DLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIP 240
                            Q+LN+C+ +E  ME + YMY +PI P   P +RR+  VQE    
Sbjct: 1062 LRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVP--APVQRRRPLVQEP--- 1121

Query: 241  MHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVD 300
                   DQ +++  + +++PP TQTQ               HN                
Sbjct: 1122 -------DQLEEVDQHGKEVPPMTQTQS-------------EHNY--------------- 1181

Query: 301  PSTPVMMMSASGTQYLDTPVPPL------YYDSEAGPSSSYEASTQFLHIPILPLHHDLE 337
              +PVMMM   GT Y D+ V         YY+S+AG SS+ +   Q+             
Sbjct: 1182 -VSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSST-DFGQQY------------- 1239

BLAST of Lcy03g005760 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 8.5e-47
Identity = 139/419 (33.17%), Postives = 193/419 (46.06%), Query Frame = 0

Query: 1   MAPQRRHINDHELVGRPYGSR--------------------------------------- 60
           +APQ  H+N ++L GR YGSR                                       
Sbjct: 121 VAPQLLHVNANQLHGRAYGSRWRDQFCVTRLATHVVSQYRYMFDLLQPSQIVWEPYKTVI 180

Query: 61  --------NGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLR 120
                   NGH+IWRT+SPLICF+I EWH P+R++RQFG+ + VP +CNT P LH IDLR
Sbjct: 181 DSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLR 240

Query: 121 NGDWPTKHAPYVKRWHSRRGFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ------- 180
             DW  + A  V RWH+RR F A    ++  ++D + +Y+ WY+NI++ YITQ       
Sbjct: 241 TADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSH 300

Query: 181 --------------DLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIP 240
                           Q+LN+C+ +E  ME + YMY +PI P   P +RR+  VQE    
Sbjct: 301 LRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVP--APVQRRRPLVQEP--- 360

Query: 241 MHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVD 300
                  DQ +++  + +++PP TQTQ               HN                
Sbjct: 361 -------DQLEEVDQHGKEVPPMTQTQS-------------EHNY--------------- 420

Query: 301 PSTPVMMMSASGTQYLDTPVPPL------YYDSEAGPSSSYEASTQFLHIPILPLHHDLE 337
             +PVMMM   GT Y D+ V         YY+S+AG SS+ +   Q+             
Sbjct: 421 -VSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSST-DFGQQY------------- 478

BLAST of Lcy03g005760 vs. NCBI nr
Match: KAA0034013.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-50
Identity = 137/376 (36.44%), Postives = 191/376 (50.80%), Query Frame = 0

Query: 1   MAPQRRHINDHELVGRPYGSR----------------------------NGHDIWRTVSP 60
           +APQ  H+N ++L GR YGSR                            NGH+IWRT+SP
Sbjct: 418 VAPQLLHVNANQLHGRAYGSRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISP 477

Query: 61  LICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLRNGDWPTKHAPYVKRWHSRR 120
           LICF+I EWH P+R++RQFG+ + VP +CNT P L  IDLR  DW  + A  V RWH+RR
Sbjct: 478 LICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLQNIDLRTADWSDRVAHLVMRWHNRR 537

Query: 121 GFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ-----DLQILNLCDSDEINMEQLQYM 180
            F A    ++  ++D + +Y+ WY+NI++ YITQ        +LN+C+ +E  ME + YM
Sbjct: 538 RFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLVLNICNDNEQYMENIHYM 597

Query: 181 YHIPIPPPRGPRRRRQAQVQEEEIPMHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIP 240
           Y +PI P   P +RR+  VQE           DQ +++  + E++PP TQTQ        
Sbjct: 598 YDVPIVP--APVQRRRPLVQEP----------DQLEEVDQHGEEVPPMTQTQS------- 657

Query: 241 YQPDQIHHNVEDIPPFTQTQDGGVDPSTPVMMMSASGTQYLDTPVPPL------YYDSEA 300
                  HN                  +PVMMM   GT Y D+ V         YY+SEA
Sbjct: 658 ------EHNY----------------VSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEA 717

Query: 301 GPSSSYEASTQFLHIPILPLHHDLEVGPLSSYEVG--PSSSYVHGRGRGRGEHAQYFY-- 332
           G SS+ +   Q+                   Y++G  PSSSY+HG GRGRGEH +Y Y  
Sbjct: 718 GQSST-DFGQQY-------------------YDLGSDPSSSYMHGHGRGRGEHNEYLYYE 732

BLAST of Lcy03g005760 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 203.0 bits (515), Expect = 4.2e-48
Identity = 139/411 (33.82%), Postives = 193/411 (46.96%), Query Frame = 0

Query: 1   MAPQRRHINDHELVGRPYGSR--------------------------------------- 60
           +APQ  H+N ++L GR YGSR                                       
Sbjct: 234 VAPQLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVI 293

Query: 61  --------NGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLR 120
                   NGH+IWRT+SPLICF+I EWH P+R++RQFG+ + VP +CNT P LH IDLR
Sbjct: 294 DSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLR 353

Query: 121 NGDWPTKHAPYVKRWHSRRGFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ------- 180
             DW  + A  V RWH+RR F A    ++  ++D + +Y+ WY+NI++ YITQ       
Sbjct: 354 TADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSH 413

Query: 181 --------------DLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIP 240
                           Q+LN+C+ +E  ME + YMY +PI P   P +RR+  VQE    
Sbjct: 414 LRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVP--APVQRRRPLVQEP--- 473

Query: 241 MHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVD 300
                  DQ +++  + E++PP TQTQ               HN                
Sbjct: 474 -------DQLEEVDQHGEEVPPMTQTQS-------------EHNY--------------- 533

Query: 301 PSTPVMMMSASGTQYLDTPVPPL------YYDSEAGPSSSYEASTQFLHIPILPLHHDLE 332
             +PVMMM   GT Y D+ V         YY+SEAG SS+ +   Q+             
Sbjct: 534 -VSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSST-DFGQQY------------- 583

BLAST of Lcy03g005760 vs. NCBI nr
Match: KAA0047926.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-47
Identity = 127/347 (36.60%), Postives = 179/347 (51.59%), Query Frame = 0

Query: 17  PYGSRNGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLRNGD 76
           P+   NGHDIWRT+SPLICF+I EWH P+R++RQF + + VP +CNT P LH IDLR+ D
Sbjct: 599 PHFCTNGHDIWRTISPLICFYIGEWHHPDRVLRQFSIQQVVPRDCNTEPLLHNIDLRSSD 658

Query: 77  WPTKHAPYVKRWHSRRGFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ---------- 136
           W  + A  V +WH+RR F      ++  ++  + +Y+ WY+NIT+ YITQ          
Sbjct: 659 WSDRVAYLVMQWHNRRRFTTTEPPIEQFDMYVTQEYIHWYKNITKLYITQLGAAMSHLNV 718

Query: 137 ---DLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIPMHEQPFLDQPD 196
                Q+LN+C+ +E  ME + YMY +PI P    RRR               P + +PD
Sbjct: 719 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPALVQRRR---------------PLVQEPD 778

Query: 197 QIHHN---VEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVDPSTPVMMM 256
           Q+  N   VE++PP T T                         TQT    V   +PVMMM
Sbjct: 779 QLEENDQHVEEVPPVTLT------------------------LTQTDHSYV---SPVMMM 838

Query: 257 SASGTQYLDTPVPPL------YYDSEAGPSSSYEASTQFLHIPILPLHHDLEVGPLSSYE 316
              GT Y D+ V         YY+SEAG SS+ +   Q+                   Y+
Sbjct: 839 PTFGTTYYDSGVGQSSDFGRGYYNSEAGRSST-DFGQQY-------------------YD 883

Query: 317 VG--PSSSYVHGRGRGRGEHAQYFY---PTESIDEAGEQEEQEEPDQ 336
           +G  PSSSY+HG GRGRGEH +Y Y   P   ++++ EQ++Q+  ++
Sbjct: 899 LGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEE 883

BLAST of Lcy03g005760 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-46
Identity = 139/419 (33.17%), Postives = 193/419 (46.06%), Query Frame = 0

Query: 1   MAPQRRHINDHELVGRPYGSR--------------------------------------- 60
           +APQ  H+N ++L GR YGSR                                       
Sbjct: 121 VAPQLLHVNANQLHGRAYGSRWRDQFCVTRLATHVVSQYRYMFDLLQPSQIVWEPYKTVI 180

Query: 61  --------NGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLR 120
                   NGH+IWRT+SPLICF+I EWH P+R++RQFG+ + VP +CNT P LH IDLR
Sbjct: 181 DSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLR 240

Query: 121 NGDWPTKHAPYVKRWHSRRGFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ------- 180
             DW  + A  V RWH+RR F A    ++  ++D + +Y+ WY+NI++ YITQ       
Sbjct: 241 TADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSH 300

Query: 181 --------------DLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIP 240
                           Q+LN+C+ +E  ME + YMY +PI P   P +RR+  VQE    
Sbjct: 301 LRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVP--APVQRRRPLVQEP--- 360

Query: 241 MHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVD 300
                  DQ +++  + +++PP TQTQ               HN                
Sbjct: 361 -------DQLEEVDQHGKEVPPMTQTQS-------------EHNY--------------- 420

Query: 301 PSTPVMMMSASGTQYLDTPVPPL------YYDSEAGPSSSYEASTQFLHIPILPLHHDLE 337
             +PVMMM   GT Y D+ V         YY+S+AG SS+ +   Q+             
Sbjct: 421 -VSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSST-DFGQQY------------- 478

BLAST of Lcy03g005760 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-46
Identity = 139/419 (33.17%), Postives = 193/419 (46.06%), Query Frame = 0

Query: 1    MAPQRRHINDHELVGRPYGSR--------------------------------------- 60
            +APQ  H+N ++L GR YGSR                                       
Sbjct: 882  VAPQLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVI 941

Query: 61   --------NGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLR 120
                    NGH+IWRT+SPLICF+I EWH P+R++RQFG+ + VP +CNT P LH IDLR
Sbjct: 942  DSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLR 1001

Query: 121  NGDWPTKHAPYVKRWHSRRGFIAVNSLVDA-NVDTSPDYMPWYENITRRYITQ------- 180
              DW  + A  V RWH+RR F A    ++  ++D + +Y+ WY+NI++ YITQ       
Sbjct: 1002 TADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSH 1061

Query: 181  --------------DLQILNLCDSDEINMEQLQYMYHIPIPPPRGPRRRRQAQVQEEEIP 240
                            Q+LN+C+ +E  ME + YMY +PI P   P +RR+  VQE    
Sbjct: 1062 LRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVP--APVQRRRPLVQEP--- 1121

Query: 241  MHEQPFLDQPDQIHHNVEDIPPFTQTQDGVDPSIPYQPDQIHHNVEDIPPFTQTQDGGVD 300
                   DQ +++  + +++PP TQTQ               HN                
Sbjct: 1122 -------DQLEEVDQHGKEVPPMTQTQS-------------EHNY--------------- 1181

Query: 301  PSTPVMMMSASGTQYLDTPVPPL------YYDSEAGPSSSYEASTQFLHIPILPLHHDLE 337
              +PVMMM   GT Y D+ V         YY+S+AG SS+ +   Q+             
Sbjct: 1182 -VSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSST-DFGQQY------------- 1239

BLAST of Lcy03g005760 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-22
Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 0

Query: 22  NGHDIWRTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLRNG---DWP 81
           +G +IWRTV+PLICF ++EWH P+R++RQFG+ + +P  C+   +LH ID R     DW 
Sbjct: 338 SGENIWRTVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWS 397

Query: 82  TKHAPYVKRWHSRRGFIAVNSLVDANVDTSPDYMPWYENITRRYIT 125
            +H+ ++  W +R   +       + +D +  YM WY  ITRR I+
Sbjct: 398 ARHSRHIGLWEARVSSVVSGEPECSPMDYNDPYMEWYRRITRRIIS 443

BLAST of Lcy03g005760 vs. TAIR 10
Match: AT2G25010.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.2e-06
Identity = 29/92 (31.52%), Postives = 43/92 (46.74%), Query Frame = 0

Query: 28  RTVSPLICFHIIEWHLPNRLMRQFGMIENVPINCNTNPSLHEIDLRNGDWPTKHAPYVKR 87
           R+ + L+CF  IE H P+R +RQFG  + +P+        +    R  D  T  +   + 
Sbjct: 322 RSKTTLVCFEKIELHFPDRCLRQFGKRQPIPLKVKRRDRKNR---RLDDLDTSMSLACEE 381

Query: 88  WHSRRGFIAVNSLVDANVDTSPDYMPWYENIT 120
           W + RG   V+S    NV     YM WY  I+
Sbjct: 382 W-AERGDHIVDSPGGGNVVDDGAYMEWYARIS 409

BLAST of Lcy03g005760 vs. TAIR 10
Match: AT1G17930.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 49.3 bits (116), Expect = 7.2e-06
Identity = 35/116 (30.17%), Postives = 58/116 (50.00%), Query Frame = 0

Query: 28  RTVSPLICFHIIEWHLPNRLMRQFGMIENVP--INCNTNPSLHEIDLRNGDWPTKHAPYV 87
           R+ + LI   ++EWH P+R M+QFG+ + +P  +    N   H+ DL   D  T      
Sbjct: 311 RSRTKLIGPKVVEWHFPDRCMKQFGLCQVIPGEVPPRKNEKNHDEDLLE-DMNTAD---- 370

Query: 88  KRWHSRRGFIAVNSLVDANVDTSPDYMPWYENITRRYITQDLQILNLCDSDEINME 142
           + W  RR  I  N     N D S +YM W+ +IT   + +D  +    ++D +N++
Sbjct: 371 EEWMRRRENIVENG--GGNGDES-EYMQWFNSITVPKLHRDTSL----EADIMNVQ 414

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LNG53.5e-2139.62Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana... [more]
Q9LMT71.0e-0430.17Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A5A7SU331.3e-5036.44Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7VIP62.0e-4833.82Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5A7U1155.9e-4836.60Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5D3BAB08.5e-4733.17Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7T5988.5e-4733.17Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
Match NameE-valueIdentityDescription
KAA0034013.12.6e-5036.44serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0067080.14.2e-4833.82mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
KAA0047926.11.2e-4736.60mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
KAA0036767.11.7e-4633.17serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYJ95836.11.7e-4633.17serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
AT1G48120.12.5e-2239.62hydrolases;protein serine/threonine phosphatases [more]
AT2G25010.14.2e-0631.52Aminotransferase-like, plant mobile domain family protein [more]
AT1G17930.17.2e-0630.17Aminotransferase-like, plant mobile domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019557Aminotransferase-like, plant mobile domainPFAMPF10536PMDcoord: 21..116
e-value: 5.8E-15
score: 55.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..341

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g005760.1Lcy03g005760.1mRNA