Lcy02g002760 (gene) Sponge gourd (P93075) v1
|
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGAGTTGAAGAGAGAGATGAGGTCGTAATGGCCGCCGACTTCTTCTTGTCATATACCGATGAGCCTCATGCTTCAAGGAGACACCAAATCCCCTCTCAATACCCTCAGATTCGGGAGCTCTTCGGTCCTGACCTGTGGGCTTTCTTTAAGGTTTCATTTCTTCTTTTGATTTTACTGGTTTGTGTGTGGCTGATTCTAAGAATGTGGAGAGTTGTGGTTTTCTCCTTGCTTGAATCATGAGCATTTGTCTGAAGTTTCCTCTGTTTTTGCAACTGGGGCCAGCTTTGATTCAGGATTGTTTTGGTTTAAAAATTATTTAAAGTTACCATTCTTTTTCTTATTTCGAATTTAAAAGAATGTCGTGGAAGAAATAGAACTTTACCCATTTTTACTATGGATTGGAAAAGTTTTGTGGTCCTCAAAGAATCGTGTTGTTTGTGCAACAATTTCATGTCTTCTTTTGTTGGACTTATCTAAATTTTTGGTAAATGCGGAAGTTTAAATGCCTATAAATTTACTATTGAGATTCTGTATAGAATTCCTTACTCAAATATCTGATTTTAGCAGACGTTTAATTGCAATTTAGGGCCTGTATAGTTTCAAATGAAACCATTCATGTTATAAAAAAAAAATATCCCTAAGGTTAAATTTTTAGGCTGCTGTTGACTAGGGAGGACTGATTTTTTGATTGTTGGCTGTATTTGTGGAGAAGAGCAGAATGATTGTACTTATTTAACGAACTGCATTAGCATTTTGATTAATCTGATCAGAAAGTAAAGTCATGAAGAATGAGAAATTGGAGTGGACAAGTATTTATGAAGAGTTAGTTCAGAATGTTATATTTTGGGTCATTTGCCCAAAATTCAATTTCTACATTCTGCTTTCTTTATGAACTCTGCATTCATTCTGCTTCTTTTCATCCTTTTGTGTTCTTTATATCCAGACATGGGGAAGATTGATAGTGGGGGGAGTGCATGTTTTGGAAAGCAGGATGGTGGAAACAACACTTTGTTTCATGTCTGAGGAAGCCTAAATGACAGGAGTTGAAGAGAGAGATGAGGTCGTAATGGCCGCCGACTTCTTCTTGTCATATACCGATGAGCCTCATGCTTCAAGGAGACACCAAATCCCCTCTCAATACCCTCAGATTCGGGAGCTCTTCGGTCCTGACCTGTGGGCTTTCTTTAAGACATGGGGAAGATTGATAGTGGGGGGAGTGCATGTTTTGGAAAGCAGGATGGTGGAAACAACACTTTGTTTCATGTCTGAGGAAGCCTAA ATGACAGGAGTTGAAGAGAGAGATGAGGTCGTAATGGCCGCCGACTTCTTCTTGTCATATACCGATGAGCCTCATGCTTCAAGGAGACACCAAATCCCCTCTCAATACCCTCAGATTCGGGAGCTCTTCGGTCCTGACCTGTGGGCTTTCTTTAAGACATGGGGAAGATTGATAGTGGGGGGAGTGCATGTTTTGGAAAGCAGGATGGTGGAAACAACACTTTGTTTCATGTCTGAGGAAGCCTAA MTGVEERDEVVMAADFFLSYTDEPHASRRHQIPSQYPQIRELFGPDLWAFFKTWGRLIVGGVHVLESRMVETTLCFMSEEA Homology
BLAST of Lcy02g002760 vs. ExPASy Swiss-Prot
Match: Q9ZPH4 (Sphingolipid delta(4)-desaturase DES1-like OS=Arabidopsis thaliana OX=3702 GN=At4g04930 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.8e-14 Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of Lcy02g002760 vs. ExPASy Swiss-Prot
Match: Q6H5U3 (Sphingolipid delta(4)-desaturase DES1-like OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639600 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.5e-11 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Lcy02g002760 vs. ExPASy Swiss-Prot
Match: O44186 (Putative sphingolipid delta(4)-desaturase OS=Caenorhabditis elegans OX=6239 GN=F33D4.4 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-05 Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 0
BLAST of Lcy02g002760 vs. ExPASy TrEMBL
Match: A0A6J1EFX3 (Sphingolipid delta(4)-desaturase DES1-like OS=Cucurbita moschata OX=3662 GN=LOC111433967 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.0e-16 Identity = 44/52 (84.62%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Lcy02g002760 vs. ExPASy TrEMBL
Match: A0A0A0LSB9 (Sphingolipid delta(4)-desaturase DES1-like OS=Cucumis sativus OX=3659 GN=Csa_1G073750 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15 Identity = 43/52 (82.69%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Lcy02g002760 vs. ExPASy TrEMBL
Match: A0A6J1CEI0 (Sphingolipid delta(4)-desaturase DES1-like OS=Momordica charantia OX=3673 GN=LOC111010944 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.5e-15 Identity = 43/52 (82.69%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Lcy02g002760 vs. ExPASy TrEMBL
Match: A0A6J1K2T6 (Sphingolipid delta(4)-desaturase DES1-like OS=Cucurbita maxima OX=3661 GN=LOC111490149 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.9e-15 Identity = 42/48 (87.50%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of Lcy02g002760 vs. ExPASy TrEMBL
Match: A0A6J1GTF2 (Sphingolipid delta(4)-desaturase DES1-like OS=Cucurbita moschata OX=3662 GN=LOC111457308 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.9e-15 Identity = 42/48 (87.50%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of Lcy02g002760 vs. NCBI nr
Match: KAG6584001.1 (Sphingolipid delta(4)-desaturase DES1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15 Identity = 44/52 (84.62%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Lcy02g002760 vs. NCBI nr
Match: XP_022927006.1 (sphingolipid delta(4)-desaturase DES1-like [Cucurbita moschata] >XP_022927007.1 sphingolipid delta(4)-desaturase DES1-like [Cucurbita moschata] >KAG7019623.1 Sphingolipid delta(4)-desaturase DES1-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15 Identity = 44/52 (84.62%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Lcy02g002760 vs. NCBI nr
Match: XP_038893930.1 (sphingolipid delta(4)-desaturase DES1-like [Benincasa hispida]) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15 Identity = 44/52 (84.62%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Lcy02g002760 vs. NCBI nr
Match: XP_004146595.1 (sphingolipid delta(4)-desaturase DES1-like [Cucumis sativus] >KGN64668.1 hypothetical protein Csa_014335 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 3.2e-15 Identity = 43/52 (82.69%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Lcy02g002760 vs. NCBI nr
Match: XP_022140225.1 (sphingolipid delta(4)-desaturase DES1-like [Momordica charantia]) HSP 1 Score: 90.5 bits (223), Expect = 7.2e-15 Identity = 43/52 (82.69%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Lcy02g002760 vs. TAIR 10
Match: AT4G04930.1 (fatty acid desaturase family protein ) HSP 1 Score: 78.2 bits (191), Expect = 3.4e-15 Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|