Lcy01g007690 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTAGCCCGAACGGGTGTTTCCTTTGCTACAAAAGTTTGGAAAGTATGGACTATCTCTTTATTCGTTGTGACCTTGCTTATCCCATTTGGGTGTTCTTCCATCAGGCCACTGGTTTCCTTTTGCCGATTCCTCTCCATGTGGATCAATTTTATATGGAGATCTTTCATTGGAAGCCAAATTCTCAGAGGCATATTCTTATCCAATCATTCTTTACTGCCACTTTGTGGACTTTGTGGAATGAGCGCAACAGTCGAATCTTCAAAGGGATCTCTCGCAGCTCTGCTCAAATTAGGGAGGATAGCTTTGCTCTTTCTGGATTTTGGCCGTGTACCTCAAGCCTTTTTTGTAATTATGAAGCCTCTTCTATTTTCCTTATAATTGGGAGGCTTTCATGTAGCTTTTCCTTGGTATGTTTCTCACATACATGTTAATAAAGTATCCATTTTCTAAAAAAAGGAGTGTTTCTTGAGAGTTAAAACGAATGGTTCAAATTGGATCATGGAGACTTGGAGAGTTAGATTTTAGGGATGCAATTTTTAGAGTATAGTATTTTTGGTTCGACAATTTTTTAATCATGTTTGAGAGTTCAAGCCAACAAAAGCATGACTCAACTCACATAAAACTTGTATTCGACCAAGAGGTTAGAGGTTCAATTCCCTATCCCTACATGTTGTAAAAAAAAAAAGAGTGATAATTAAATGGATTTTCTATAAAAGTATTTTAAAGTGGTTTTATGTGTTTTTTAGAATTTCTAAAAGCAATCTTCACCATGTAACCCAACATCAAGAAAATTTTGGAAAATAATCGCAATTACTCATGTAAGAGCACTATTTCAGTCTTCCAAAATTATGTTAAAATACTCACCTAGATCATTTCATTTTTGACATGAGAGAAATTAGACGTAGAAATTTAAACAATGTTTATATTTATACATTATAACGGAAGTAAGGAAATTTCCCAATTTATTCTTTTTTTTTTTTCTTTTTTTGAGTTCAACAATATTTGTGGTGGAGGATTCGAACTCAGACTTCTTAATCATAAACACATACTTTAAATGCAAGTTTGAACAATCCTATTGTTGGTTTCCCAATTTATTGTTGAAAAACAAATTACTGAAGAAAAATGTAAAGGGCTCTTTATTGAAAAAAATAAAATAAAACTATTTACCATAATTTAGTTGTCCAACCATTATCGAACAGTATTGGGGTACGATTAATAATCTGTTATAGTTTTCTAAATATAGTTTTCCCATCAAACAAGTTTTTTTTTTATTATATATAGGGCTTCCAATCATTCAAAATTTCCAAACACCCTCACCTTTGCCATTGCTACTAATCATCATTTGTGAAACGAGCTTGTGCCCTGTGACTTTTAACACAATCAACCATGACAATGACAAGAGGTTTTAAGCTTTTTCACATTGTTTTCGTAGTGTTTGCTTGGCAGTGTTGTGCAAAGGTAACTGCCACTTTCAACGATGTCACTGGTGTTGTCGATCTCGGCCTCAATCATCAATTTTCCTTCCGTGTATTTGGATCACATGGTTTTGGGATCCCAAAAGTTGGTGGTAGTGTCGCACCAAGTGTAGACATGCAGAGTCCTGTAGAAGCACCAGGGATTGCCCCTGTTGGGCTTGAAACTCCAATAAGCAAAGACAATAAAGCTTTGTCTTTTGGTCTTGAAATTAAGAAGGGTCTCACTACATCCCTTGGTTTTGAAATTCCCAAGTGTAAGGGCGACATTGTTGTTTCTCATGGTCACGAAATAAGTAAGAAGAGTGGCGTCAACATTGATATTTCCAATGGTGGAAAAGTTAGTATGAAGAGCAGTGGTAGTGTTCTTTCAAATGGTGGCAACATTGATGTTTCCAAAGGTGGAAAAGTTAGTTTGAAGGGAGAGACGATATTGTTTCTCATGGTGTTGGAGCTACAAAGAGTAGTAATGTTGTTATTTCTCATGGTCTTAAAACTCTATTGAGTAGCACCAAAAAAGCCTTTTCTCTTTTGGTCTTGAAACAAAGAAGAGCATGACCTTATCTCATGGTCAAAGAACTCACAAGAGTAAAGGTGGCATTGTTGTTTCTCATTGTCGTGGAATTAATCTTAAGAATGGAGGTATTAATGCAAAGAGCAAAGGTAGTGTTGCAAAGCTATGTCCCCAGCTATCCATTTAGTCTTATCCCCAAAATGGTAGGCTTATTGAGTCTGCGATGTTTGGCCACTCTCACCCATGCAAATCAAAGGATAATCCTAGATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTTATATGTATGAGATGTTCAGTTTCAACAGTAAACGGTGTTGTAAAGTGAAAGTGACTTATCTCCTGGTCCGATCTCTATGCAAACTCTTTGAATAGGACACCCTCACTCACATGTCTTATACATGAACGATTAGGATCACATCGTCTGTCTTTAAATAACAAAGCGAGTCGCGCCAATAGTGTCCCCAGGATTAAGGTACTCAACCTTATTAATATACTATAGATCGTTTAGACTATTTACTTGAATTTGATCCATACTAATGTCACACATAAACTTCAAGTATACGTAATATAGCCAAGGGTTTTTTAGTTTATTGGATTTGTGGTTATATTTAGGCAAAACAAATATATAGAAATAATACTTCACTGAAGCAAGTCAAATGTTACATTTACTATCTATGAGTTTTAGGGCATAAAACCCAACAGTTTTGAGTAGACGATGCTTTCACAATGACTAGACAAGAATATTCAAAAAAATTAGGGAGGTAAACGAAAACGTCTCCTCTTATAGTCCTTTCCATGCCGAGAAAGCAATCCTCTACCTCCGAAACCCTGATTATTCTCATCTTCTTTGCAAAAATAAGGGATGGGTCACAGTGGGAAATTTTTATGTTAAGTTCGAACGATGGGACTCTGAAATGCACGTTGCTGCTAAACTTGTTCCCAGTACGGCGGATGGGTGAAGTTCTAGGGAATCCCACTCCATGCGTGGAATATGAAAACTTTTATTCAGATAGGGGAAGCTTATGGGGGCTTTATTGAGGTCTAAAAAAACACTACGCGTAAACTGGATCTTATCAAGGCTGTCATCAAGATTAAAGATAATTTATGTGGCTTCATTTTGGCGGCAATCAGAATTACAGATGATCAAGGGTAATGCTTCACGGTTCGTACGGTGTTGCCGAACAAAGGAAAATGGATGGTTTGCTGAAACCCTAAGATCCATGGAACGTTTACTCGAGAAGCGTCTTTGGAATATGATGAATTTGACGTCAAATCTGAATCATTTCTGTTCAGTGGAAATGAGGCATGCAGAGTGA ATGATTAGCCCGAACGGGTGTTTCCTTTGCTACAAAAGTTTGGAAAGTATGGACTATCTCTTTATTCGTTGTGACCTTGCTTATCCCATTTGGGTGTTCTTCCATCAGGCCACTGGTTTCCTTTTGCCGATTCCTCTCCATGTGGATCAATTTTATATGGAGATCTTTCATTGGAAGCCAAATTCTCAGAGGCATATTCTTATCCAATCATTCTTTACTGCCACTTTGTGGACTTTGTGGAATGAGCGCAACAGTCGAATCTTCAAAGGGATCTCTCGCAGCTCTGCTCAAATTAGGGAGGATAGCTTTGCTCTTTCTGGATTTTGGCCGTGTACCTCAAGCCTTTTTTGTAATTATGAAGCCTCTTCTATTTTCCTTATAATTGGGAGGCTTTCATGTAGCTTTTCCTTGTGTTGTGCAAAGGTAACTGCCACTTTCAACGATGTCACTGGTGTTGTCGATCTCGGCCTCAATCATCAATTTTCCTTCCGTGTATTTGGATCACATGGTTTTGGGATCCCAAAAGTTGGTGGTAGTGTCGCACCAAGTGTAGACATGCAGAGTCCTGTAGAAGCACCAGGGATTGCCCCTGTTGGGCTTGAAACTCCAATAAGCAAAGACAATAAAGCTTTGTCTTTTGGTCTTGAAATTAAGAAGGGTCTCACTACATCCCTTGGTTTTGAAATTCCCAAGTGTAAGGGCGACATTGTTGTTTCTCATGGTCACGAAATAAGTAAGAAGAGTGGCGTCAACATTGATATTTCCAATGGTGGAAAAGTTAGTATGAAGAGCAGTGGTAGTGTTCTTTCAAATGGTGGCAACATTGATGTTTCCAAAGGTGGAAAAGGGAAGCTTATGGGGGCTTTATTGAGGTCTAAAAAAACACTACGCGTAAACTGGATCTTATCAAGGCTGTCATCAAGATTAAAGATAATTTATGTGGCTTCATTTTGGCGGCAATCAGAATTACAGATGATCAAGGGTAATGCTTCACGGTTCGTACGGTGTTGCCGAACAAAGGAAAATGGATGGTTTGCTGAAACCCTAAGATCCATGGAACGTTTACTCGAGAAGCGTCTTTGGAATATGATGAATTTGACGTCAAATCTGAATCATTTCTGTTCAGTGGAAATGAGGCATGCAGAGTGA ATGATTAGCCCGAACGGGTGTTTCCTTTGCTACAAAAGTTTGGAAAGTATGGACTATCTCTTTATTCGTTGTGACCTTGCTTATCCCATTTGGGTGTTCTTCCATCAGGCCACTGGTTTCCTTTTGCCGATTCCTCTCCATGTGGATCAATTTTATATGGAGATCTTTCATTGGAAGCCAAATTCTCAGAGGCATATTCTTATCCAATCATTCTTTACTGCCACTTTGTGGACTTTGTGGAATGAGCGCAACAGTCGAATCTTCAAAGGGATCTCTCGCAGCTCTGCTCAAATTAGGGAGGATAGCTTTGCTCTTTCTGGATTTTGGCCGTGTACCTCAAGCCTTTTTTGTAATTATGAAGCCTCTTCTATTTTCCTTATAATTGGGAGGCTTTCATGTAGCTTTTCCTTGTGTTGTGCAAAGGTAACTGCCACTTTCAACGATGTCACTGGTGTTGTCGATCTCGGCCTCAATCATCAATTTTCCTTCCGTGTATTTGGATCACATGGTTTTGGGATCCCAAAAGTTGGTGGTAGTGTCGCACCAAGTGTAGACATGCAGAGTCCTGTAGAAGCACCAGGGATTGCCCCTGTTGGGCTTGAAACTCCAATAAGCAAAGACAATAAAGCTTTGTCTTTTGGTCTTGAAATTAAGAAGGGTCTCACTACATCCCTTGGTTTTGAAATTCCCAAGTGTAAGGGCGACATTGTTGTTTCTCATGGTCACGAAATAAGTAAGAAGAGTGGCGTCAACATTGATATTTCCAATGGTGGAAAAGTTAGTATGAAGAGCAGTGGTAGTGTTCTTTCAAATGGTGGCAACATTGATGTTTCCAAAGGTGGAAAAGGGAAGCTTATGGGGGCTTTATTGAGGTCTAAAAAAACACTACGCGTAAACTGGATCTTATCAAGGCTGTCATCAAGATTAAAGATAATTTATGTGGCTTCATTTTGGCGGCAATCAGAATTACAGATGATCAAGGGTAATGCTTCACGGTTCGTACGGTGTTGCCGAACAAAGGAAAATGGATGGTTTGCTGAAACCCTAAGATCCATGGAACGTTTACTCGAGAAGCGTCTTTGGAATATGATGAATTTGACGTCAAATCTGAATCATTTCTGTTCAGTGGAAATGAGGCATGCAGAGTGA MISPNGCFLCYKSLESMDYLFIRCDLAYPIWVFFHQATGFLLPIPLHVDQFYMEIFHWKPNSQRHILIQSFFTATLWTLWNERNSRIFKGISRSSAQIREDSFALSGFWPCTSSLFCNYEASSIFLIIGRLSCSFSLCCAKVTATFNDVTGVVDLGLNHQFSFRVFGSHGFGIPKVGGSVAPSVDMQSPVEAPGIAPVGLETPISKDNKALSFGLEIKKGLTTSLGFEIPKCKGDIVVSHGHEISKKSGVNIDISNGGKVSMKSSGSVLSNGGNIDVSKGGKGKLMGALLRSKKTLRVNWILSRLSSRLKIIYVASFWRQSELQMIKGNASRFVRCCRTKENGWFAETLRSMERLLEKRLWNMMNLTSNLNHFCSVEMRHAE Homology
BLAST of Lcy01g007690 vs. ExPASy TrEMBL
Match: A0A0A0K7W7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.3e-24 Identity = 75/145 (51.72%), Postives = 93/145 (64.14%), Query Frame = 0
BLAST of Lcy01g007690 vs. ExPASy TrEMBL
Match: A0A0A0K5J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.6e-24 Identity = 83/162 (51.23%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Lcy01g007690 vs. ExPASy TrEMBL
Match: A0A5A7U057 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001040 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.6e-23 Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 0
BLAST of Lcy01g007690 vs. ExPASy TrEMBL
Match: A0A0A0KAZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398760 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.1e-22 Identity = 71/136 (52.21%), Postives = 88/136 (64.71%), Query Frame = 0
BLAST of Lcy01g007690 vs. ExPASy TrEMBL
Match: A0A5A7U318 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001070 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.1e-21 Identity = 79/166 (47.59%), Postives = 97/166 (58.43%), Query Frame = 0
BLAST of Lcy01g007690 vs. NCBI nr
Match: KAE8646352.1 (hypothetical protein Csa_015951, partial [Cucumis sativus]) HSP 1 Score: 125.6 bits (314), Expect = 9.5e-25 Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 0
BLAST of Lcy01g007690 vs. NCBI nr
Match: KAA0048674.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18172.1 Ankyrin repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-22 Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 0
BLAST of Lcy01g007690 vs. NCBI nr
Match: KAE8646351.1 (hypothetical protein Csa_023818, partial [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 1.3e-21 Identity = 80/157 (50.96%), Postives = 101/157 (64.33%), Query Frame = 0
BLAST of Lcy01g007690 vs. NCBI nr
Match: KAA0048677.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18175.1 Ankyrin repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 112.8 bits (281), Expect = 6.3e-21 Identity = 79/166 (47.59%), Postives = 97/166 (58.43%), Query Frame = 0
BLAST of Lcy01g007690 vs. NCBI nr
Match: XP_023004881.1 (uncharacterized protein LOC111498059 [Cucurbita maxima]) HSP 1 Score: 97.4 bits (241), Expect = 2.8e-16 Identity = 68/164 (41.46%), Postives = 84/164 (51.22%), Query Frame = 0
BLAST of Lcy01g007690 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 56.2 bits (134), Expect = 6.6e-08 Identity = 31/102 (30.39%), Postives = 52/102 (50.98%), Query Frame = 0
BLAST of Lcy01g007690 vs. TAIR 10
Match: AT4G05095.1 (BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT4G04650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 4.7e-06 Identity = 28/99 (28.28%), Postives = 47/99 (47.47%), Query Frame = 0
BLAST of Lcy01g007690 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 45.8 bits (107), Expect = 8.9e-05 Identity = 27/96 (28.12%), Postives = 44/96 (45.83%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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