IVF0011927 (gene) Melon (IVF77) v1

Overview
NameIVF0011927
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein S1
Locationtig00007088: 989468 .. 990004 (+)
RNA-Seq ExpressionIVF0011927
SyntenyIVF0011927
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTGGTGGATGCAGGACCTGGTGGGACCCCCATCATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGGTTGAGACCCACGTAGCGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCCAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTGAATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCCCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAAGGAATCAAAAAGTCAAAGGCTTGATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCTGTCCTCTCATAAGGCAAAGGATATCGAATGATCGATTCAGCATTCAGAGCATTCACCCCAAAAGAACGAATATTGTGGTGAAAAAAGAAACTTTGCCTGACCTATGA

mRNA sequence

ATGTTCTTGGTGGATGCAGGACCTGGTGGGACCCCCATCATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGGTTGAGACCCACGTAGCGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCCAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTGAATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCCCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAAGGAATCAAAAAGTCAAAGGCTTGATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCTGTCCTCTCATAAGGCAAAGGATATCGAATGATCGATTCAGCATTCAGAGCATTCACCCCAAAAGAACGAATATTGTGGTGAAAAAAGAAACTTTGCCTGACCTATGA

Coding sequence (CDS)

ATGTTCTTGGTGGATGCAGGACCTGGTGGGACCCCCATCATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGGTTGAGACCCACGTAGCGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCCAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTGAATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCCCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAAGGAATCAAAAAGTCAAAGGCTTGATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCTGTCCTCTCATAAGGCAAAGGATATCGAATGATCGATTCAGCATTCAGAGCATTCACCCCAAAAGAACGAATATTGTGGTGAAAAAAGAAACTTTGCCTGACCTATGA

Protein sequence

MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Homology
[Close]
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: P26863 (Ribosomal protein S1, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS1 PE=3 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-13
Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 0 

Query: 82  GSTDV-VAGEPLFLLPR----RFRQNRAWMELNKIWQRNQK-VKGLIIEKVKGGYSVAIA 141
           G  DV V GEP  LLP+    + ++   W+EL KIW+ +Q  VKG I+  VKGGY+VAIA
Sbjct: 65  GIEDVEVFGEPKMLLPKPLEIKCKRKLVWIELTKIWRSDQNLVKGFILNSVKGGYAVAIA 124

Query: 142 GFITFLPFCPLIRQRISNDR---FSIQSIHPKRTNIVVKK 173
           G+I FLP   L  +++   +   FSI ++ PK +NIVVK+
Sbjct: 125 GYIAFLPKSLLRSRKVFYSQWRIFSILNMKPKISNIVVKE 164

[Close]
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: Q6NDP1 (30S ribosomal protein S1 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rpsA PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 29/87 (33.33%), Postives = 47/87 (54.02%), Query Frame = 0 

Query: 100 RQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLP-----------FCPLIR 159
           R+  +W +L K +Q N+KV G+I  +VKGG++V + G + FLP             PL+ 
Sbjct: 99  RREESWGKLEKAFQNNEKVFGVIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVAPLMN 158

Query: 160 QRISNDRFSIQSIHPKRTNIVVKKETL 176
              ++  F I  +  +R NIVV + T+
Sbjct: 159 ---NSQPFQILKMDRRRGNIVVSRRTV 182

[Close]
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: Q83E09 (30S ribosomal protein S1 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) OX=227377 GN=rpsA PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 0 

Query: 100 RQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLP-----FCPLIRQRISND 159
           R+ +AW EL K ++  + VKG+IIE+VKGG++V +     FLP       P+       D
Sbjct: 86  RRAKAWSELEKAYKAGEMVKGVIIERVKGGFTVDLNSVRAFLPGSLVDVKPVRDPGYLED 145

Query: 160 R---FSIQSIHPKRTNIVVKKETL 176
           +   F I  +  +R N+VV +  +
Sbjct: 146 KEIDFKIIKMDQRRNNVVVSRRAV 169

[Close]
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: P37985 (30S ribosomal protein S1 OS=Dickeya dadantii (strain 3937) OX=198628 GN=rpsA PE=3 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 7.6e-04
Identity = 30/96 (31.25%), Postives = 48/96 (50.00%), Query Frame = 0 

Query: 89  GEPLFLLPRRFRQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIR 148
           GE L L   + +++ AW+ L K ++ +  V G+I  KVKGG++V + G   FLP   L+ 
Sbjct: 80  GETL-LSREKAKRHEAWLMLEKAYEESATVTGVINGKVKGGFTVELNGIRAFLP-GSLVD 139

Query: 149 QRISND---------RFSIQSIHPKRTNIVVKKETL 176
            R   D          F +  +  KR N+VV +  +
Sbjct: 140 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173

[Close]
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: Q48082 (30S ribosomal protein S1 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rpsA PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.9e-04
Identity = 26/84 (30.95%), Postives = 43/84 (51.19%), Query Frame = 0 

Query: 101 QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISND------ 160
           ++ +W+EL K ++    V GLI  KVKGG++V + G   FLP   L+  R + +      
Sbjct: 91  RHESWIELEKAYEEKATVIGLIXGKVKGGFTVELNGVRAFLP-GSLVDTRPAREADHLLG 150

Query: 161 ---RFSIQSIHPKRTNIVVKKETL 176
               F +  +  KR N+VV +  +
Sbjct: 151 KELEFKVIKLDQKRNNVVVSRRAV 173

[Close]
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: A0A5A7V9I0 (Ribosomal protein S1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold79763G00010 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID
Sbjct: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG
Sbjct: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120

Query: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL 179
           LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Sbjct: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL 178

[Close]
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: G3EU09 (Ribosomal protein S1 OS=Cucumis melo subsp. melo OX=412675 GN=rps1 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID
Sbjct: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG
Sbjct: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120

Query: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL 179
           LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Sbjct: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL 178

[Close]
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: A0A3S9JIJ3 (Ribosomal protein S1 OS=Cucumis melo var. momordica OX=2034244 GN=rps1 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID
Sbjct: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG
Sbjct: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120

Query: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL 179
           LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Sbjct: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL 178

[Close]
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: G3EIZ9 (Ribosomal protein S1 OS=Cucumis sativus OX=3659 GN=rps1 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGP GTPIICMQDEPTGVPINRAAR ETH AVGSLDLVAGESL+KE ILERFFID
Sbjct: 1   MFLVDAGP-GTPIICMQDEPTGVPINRAARFETHSAVGSLDLVAGESLLKEQILERFFID 60

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESL+KERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQ NQKVKG
Sbjct: 61  LVAGESLLKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQTNQKVKG 120

Query: 121 LIIEKVKGGYSVAIAGFITFLPF-CPLIRQRISNDRFSIQSIHPKRTNIVV 171
            IIEKVKGGYSVAIAGFITFLPF  PLIRQRISNDRF+I+SI+PKRTNI++
Sbjct: 121 FIIEKVKGGYSVAIAGFITFLPFRRPLIRQRISNDRFTIKSINPKRTNIIL 170

[Close]
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: A0A6J1IHY3 (uncharacterized protein LOC111473236 OS=Cucurbita maxima OX=3661 GN=LOC111473236 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.2e-73
Identity = 151/170 (88.82%), Postives = 155/170 (91.18%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGP GTP ICMQDEPTGVPINRA R E    VGSLDLVAGESLIKEPILERFFID
Sbjct: 36  MFLVDAGP-GTPRICMQDEPTGVPINRATRFEN--KVGSLDLVAGESLIKEPILERFFID 95

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESLIKERAAAR ND LVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQ N KVKG
Sbjct: 96  LVAGESLIKERAAARFND-LVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKG 155

Query: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV 171
            IIEKVKGGYSVAIAGFITFLPF PLI QRISN+RF+I+SI+PKRTNIVV
Sbjct: 156 FIIEKVKGGYSVAIAGFITFLPFRPLISQRISNERFTIESINPKRTNIVV 201

[Close]
BLAST of IVF0011927 vs. NCBI nr
Match: AEN56125.1 (ribosomal protein S1 [Cucumis melo subsp. melo] >AZP40294.1 ribosomal protein S1 [Cucumis melo var. momordica] >KAA0062525.1 ribosomal protein S1 [Cucumis melo var. makuwa] >TYK19210.1 ribosomal protein S1 [Cucumis melo var. makuwa])

HSP 1 Score: 356 bits (914), Expect = 5.84e-124
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID
Sbjct: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG
Sbjct: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120

Query: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL 178
           LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Sbjct: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL 178

[Close]
BLAST of IVF0011927 vs. NCBI nr
Match: YP_004849347.1 (ribosomal protein S1 [Cucumis sativus] >ADZ10774.1 ribosomal protein S1 [Cucumis sativus])

HSP 1 Score: 305 bits (780), Expect = 1.23e-103
Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGPG TPIICMQDEPTGVPINRAAR ETH AVGSLDLVAGESL+KE ILERFFID
Sbjct: 1   MFLVDAGPG-TPIICMQDEPTGVPINRAARFETHSAVGSLDLVAGESLLKEQILERFFID 60

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESL+KERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQ NQKVKG
Sbjct: 61  LVAGESLLKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQTNQKVKG 120

Query: 121 LIIEKVKGGYSVAIAGFITFLPFC-PLIRQRISNDRFSIQSIHPKRTNIVV 170
            IIEKVKGGYSVAIAGFITFLPF  PLIRQRISNDRF+I+SI+PKRTNI++
Sbjct: 121 FIIEKVKGGYSVAIAGFITFLPFRRPLIRQRISNDRFTIKSINPKRTNIIL 170

[Close]
BLAST of IVF0011927 vs. NCBI nr
Match: XP_022974554.1 (uncharacterized protein LOC111473236 [Cucurbita maxima])

HSP 1 Score: 285 bits (730), Expect = 1.49e-95
Identity = 151/170 (88.82%), Postives = 155/170 (91.18%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGPG TP ICMQDEPTGVPINRA R E  V  GSLDLVAGESLIKEPILERFFID
Sbjct: 36  MFLVDAGPG-TPRICMQDEPTGVPINRATRFENKV--GSLDLVAGESLIKEPILERFFID 95

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESLIKERAAAR ND LVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQ N KVKG
Sbjct: 96  LVAGESLIKERAAARFND-LVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKG 155

Query: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV 170
            IIEKVKGGYSVAIAGFITFLPF PLI QRISN+RF+I+SI+PKRTNIVV
Sbjct: 156 FIIEKVKGGYSVAIAGFITFLPFRPLISQRISNERFTIESINPKRTNIVV 201

[Close]
BLAST of IVF0011927 vs. NCBI nr
Match: YP_009706796.1 (ribosomal protein S1 [Ilex pubescens] >QEP49792.1 ribosomal protein S1 [Ilex pubescens])

HSP 1 Score: 280 bits (716), Expect = 2.02e-93
Identity = 149/170 (87.65%), Postives = 153/170 (90.00%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGPG TP ICMQDEPTGVPINRA R E  V  GSLDLVAGESLIKE ILERFFID
Sbjct: 36  MFLVDAGPG-TPRICMQDEPTGVPINRATRFENKV--GSLDLVAGESLIKEQILERFFID 95

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESLIKERAAAR ND LVGSTDVVAGEPL LLPRRFRQNRAWMELNKIW+ N KVKG
Sbjct: 96  LVAGESLIKERAAARFND-LVGSTDVVAGEPLLLLPRRFRQNRAWMELNKIWRTNTKVKG 155

Query: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV 170
            IIEKVKGGYSVAIAGFITFLPF PLI QRISNDRF+I+SI+PKRTNIVV
Sbjct: 156 FIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVV 201

[Close]
BLAST of IVF0011927 vs. NCBI nr
Match: YP_003587379.2 (ribosomal protein S1 [Cucurbita pepo] >ACV96689.2 ribosomal protein S1 [Cucurbita pepo])

HSP 1 Score: 279 bits (713), Expect = 5.59e-93
Identity = 148/170 (87.06%), Postives = 153/170 (90.00%), Query Frame = 0 

Query: 1   MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFID 60
           MFLVDAGPG TP ICMQDEPTGVPINRAAR E  V  G LDLVAGESLIKEPILERFFID
Sbjct: 35  MFLVDAGPG-TPRICMQDEPTGVPINRAARFENKV--GFLDLVAGESLIKEPILERFFID 94

Query: 61  LVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKG 120
           LVAGESLIKERAAA  ND LVGSTDVVAGEPLF+LPRRFRQNRAWMELNKIWQ N KVKG
Sbjct: 95  LVAGESLIKERAAAGFND-LVGSTDVVAGEPLFILPRRFRQNRAWMELNKIWQTNTKVKG 154

Query: 121 LIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV 170
            IIEKVKGGYSVAIAGFITFLPF PLI QRISN+RF+I+SI+PK TNIVV
Sbjct: 155 FIIEKVKGGYSVAIAGFITFLPFRPLISQRISNERFTIESINPKTTNIVV 200

The following BLAST results are available for this feature:
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P268634.0e-1346.00Ribosomal protein S1, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS1 PE=... [more]
Q6NDP11.8e-0533.3330S ribosomal protein S1 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA... [more]
Q83E091.2e-0433.3330S ribosomal protein S1 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase ... [more]
P379857.6e-0431.2530S ribosomal protein S1 OS=Dickeya dadantii (strain 3937) OX=198628 GN=rpsA PE=... [more]
Q480829.9e-0430.9530S ribosomal protein S1 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 1112... [more]
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V9I04.4e-95100.00Ribosomal protein S1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
G3EU094.4e-95100.00Ribosomal protein S1 OS=Cucumis melo subsp. melo OX=412675 GN=rps1 PE=4 SV=1[more]
A0A3S9JIJ34.4e-95100.00Ribosomal protein S1 OS=Cucumis melo var. momordica OX=2034244 GN=rps1 PE=4 SV=1[more]
G3EIZ91.5e-7991.23Ribosomal protein S1 OS=Cucumis sativus OX=3659 GN=rps1 PE=4 SV=1[more]
A0A6J1IHY31.2e-7388.82uncharacterized protein LOC111473236 OS=Cucurbita maxima OX=3661 GN=LOC111473236... [more]
BLAST of IVF0011927 vs. NCBI nr
Match NameE-valueIdentityDescription
AEN56125.15.84e-124100.00ribosomal protein S1 [Cucumis melo subsp. melo] >AZP40294.1 ribosomal protein S1... [more]
YP_004849347.11.23e-10391.23ribosomal protein S1 [Cucumis sativus] >ADZ10774.1 ribosomal protein S1 [Cucumis... [more]
XP_022974554.11.49e-9588.82uncharacterized protein LOC111473236 [Cucurbita maxima][more]
YP_009706796.12.02e-9387.65ribosomal protein S1 [Ilex pubescens] >QEP49792.1 ribosomal protein S1 [Ilex pub... [more]
YP_003587379.25.59e-9387.06ribosomal protein S1 [Cucurbita pepo] >ACV96689.2 ribosomal protein S1 [Cucurbit... [more]
BLAST of IVF0011927 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011927.1IVF0011927.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome