IVF0001913.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0001913.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Location	tig00000662: 189598 .. 190104 (+)
Sequence length	507
RNA-Seq Expression	IVF0001913.2
Synteny	IVF0001913.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCCTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATAGCATCGGAGCGTTTCCGTGGTCGAATCCATTTTGAATTCGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGTGTTGAATATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTTTGAATTCGAATTCGCCTCAAATTGAAGTCTAA

mRNA sequence

ATGTTCCCTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATAGCATCGGAGCGTTTCCGTGGTCGAATCCATTTTGAATTCGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGTGTTGAATATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTTTGAATTCGAATTCGCCTCAAATTGAAGTCTAA

Coding sequence (CDS)

ATGTTCCCTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATAGCATCGGAGCGTTTCCGTGGTCGAATCCATTTTGAATTCGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGTGTTGAATATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTTTGAATTCGAATTCGCCTCAAATTGAAGTCTAA

Protein sequence

MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV

Homology

[Close]

BLAST of IVF0001913.2 vs. ExPASy Swiss-Prot
Match: Q2QD37 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhI PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.4e-92
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGF+ITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFVITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILN 161
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILN
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILN 160

[Close]

BLAST of IVF0001913.2 vs. ExPASy Swiss-Prot
Match: Q0ZIW4 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhI PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 9.1e-92
Identity = 159/166 (95.78%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQ FMITLSHANRLPVTIQYPYEKLI SERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKK+LLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKQLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQI 167
           MTEEYELSTYDRHELNYNQI+LGRLPMSV+DDYTIRTIL  NSPQI
Sbjct: 121 MTEEYELSTYDRHELNYNQIALGRLPMSVIDDYTIRTIL--NSPQI 164

[Close]

BLAST of IVF0001913.2 vs. ExPASy Swiss-Prot
Match: Q49KU4 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhI PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.6e-91
Identity = 159/166 (95.78%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLET IRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETGIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQI 167
           MTEEYELSTYDRHELNYNQI+LGRLPMSV++DYTIRTI  SNSPQI
Sbjct: 121 MTEEYELSTYDRHELNYNQIALGRLPMSVINDYTIRTI--SNSPQI 164

[Close]

BLAST of IVF0001913.2 vs. ExPASy Swiss-Prot
Match: Q9MTH8 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Oenothera elata subsp. hookeri OX=85636 GN=ndhI PE=3 SV=2)

HSP 1 Score: 336.7 bits (862), Expect = 1.6e-91
Identity = 155/161 (96.27%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLET +RKKRLLNYSIDFG+CIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETGVRKKRLLNYSIDFGVCIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS 162
           MTEEYELSTYDRHELNYNQI+LGRLPMSV+DDYTIRTILNS
Sbjct: 121 MTEEYELSTYDRHELNYNQIALGRLPMSVIDDYTIRTILNS 161

[Close]

BLAST of IVF0001913.2 vs. ExPASy Swiss-Prot
Match: A0ZZ89 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gossypium barbadense OX=3634 GN=ndhI PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.0e-91
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYG QTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGHQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWK ETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKFETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS 162
           MTEEYELSTYDRHELNYNQI+LGRLPMSV+DDYTIRT+LNS
Sbjct: 121 MTEEYELSTYDRHELNYNQIALGRLPMSVIDDYTIRTVLNS 161

[Close]

BLAST of IVF0001913.2 vs. ExPASy TrEMBL
Match: A0A1S4EU68 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo OX=3656 GN=ndhI PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.4e-95
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 169
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168

[Close]

BLAST of IVF0001913.2 vs. ExPASy TrEMBL
Match: A0A286NFL4 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhI PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.4e-95
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 169
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168

[Close]

BLAST of IVF0001913.2 vs. ExPASy TrEMBL
Match: A0A249RY38 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=ndhI PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.4e-95
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 169
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168

[Close]

BLAST of IVF0001913.2 vs. ExPASy TrEMBL
Match: A0A286NFV1 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=ndhI PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.4e-95
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 169
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168

[Close]

BLAST of IVF0001913.2 vs. ExPASy TrEMBL
Match: A0A249RZ32 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 GN=ndhI PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.4e-95
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 169
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168

[Close]

BLAST of IVF0001913.2 vs. NCBI nr
Match: YP_004841839.1 (NADH-plastoquinone oxidoreductase subunit I [Cucumis melo subsp. melo] >YP_009860129.1 NADH-plastoquinone oxidoreductase subunit I [Cucumis melo subsp. agrestis] >ASY96643.1 NADH dehydrogenase subunit I [Cucumis melo var. conomon] >ASY96731.1 NADH dehydrogenase subunit I [Cucumis melo var. makuwa] >ASY96818.1 NADH dehydrogenase subunit I [Cucumis melo var. momordica] >ASY96905.1 NADH dehydrogenase subunit I [Cucumis melo var. dudaim] >ASY96992.1 NADH dehydrogenase subunit I [Cucumis melo var. cantalupo] >ASY97166.1 NADH dehydrogenase subunit I [Cucumis melo var. inodorus] >ASY97340.1 NADH dehydrogenase subunit I [Cucumis melo var. flexuosus] >QJF46440.1 NADH dehydrogenase subunit I [Cucumis melo])

HSP 1 Score: 356 bits (913), Expect = 3.87e-124
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168

[Close]

BLAST of IVF0001913.2 vs. NCBI nr
Match: YP_009447590.1 (NADH dehydrogenase subunit I [Cucurbita moschata] >YP_009456201.1 NADH dehydrogenase subunit I [Lagenaria siceraria] >YP_009505134.1 NADH dehydrogenase subunit I [Cucurbita pepo] >YP_010131144.1 NADH-plastoquinone oxidoreductase subunit I [Benincasa hispida] >ALO21736.1 NdhI [Cucurbita argyrosperma] >ALO21820.1 NdhI [Cucurbita argyrosperma var. palmeri] >ALO21857.1 NdhI [Cucurbita argyrosperma subsp. sororia] >ALO22075.1 NdhI [Cucurbita ecuadorensis] >ALO22139.1 NdhI [Cucurbita ficifolia] >ALO22202.1 NdhI [Cucurbita foetidissima] >ALO22257.1 NdhI [Cucurbita lundelliana] >ALO22451.1 NdhI [Cucurbita okeechobeensis] >ALO22505.1 NdhI [Cucurbita okeechobeensis subsp. martinezii] >ALO22595.1 NdhI [Cucurbita pepo subsp. fraterna] >ALO22615.1 NdhI [Cucurbita pepo subsp. ovifera] >ALO22746.1 NdhI [Cucurbita pepo subsp. pepo] >ALO22813.1 NdhI [Cucurbita pepo var. texana] >ALO22924.1 NdhI [Cucurbita pedatifolia] >QHB76019.1 NADH dehydrogenase subunit I [Cucumis melo subsp. melo] >QIT04103.1 NADH dehydrogenase subunit I [Luffa aegyptiaca] >QKX48529.1 NADH-plastoquinone oxidoreductase subunit I [Luffa acutangula] >QNM38586.1 NADH-plastoquinone oxidoreductase subunit I [Lagenaria siceraria var. microcarpa])

HSP 1 Score: 347 bits (890), Expect = 1.16e-120
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS  PQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS--PQIEV 166

[Close]

BLAST of IVF0001913.2 vs. NCBI nr
Match: QZL38649.1 (NADH dehydrogenase subunit I [Citrullus naudinianus])

HSP 1 Score: 347 bits (890), Expect = 1.29e-120
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS  PQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS--PQIEV 166

[Close]

BLAST of IVF0001913.2 vs. NCBI nr
Match: ALO22694.1 (NdhI [Cucurbita pepo var. ozarkana])

HSP 1 Score: 345 bits (886), Expect = 4.73e-120
Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANR PVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRFPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS  PQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS--PQIEV 166

[Close]

BLAST of IVF0001913.2 vs. NCBI nr
Match: YP_009447505.1 (NADH dehydrogenase subunit I [Cucurbita maxima] >ALO22343.1 NdhI [Cucurbita maxima subsp. andreana] >ATY69944.1 NADH dehydrogenase subunit I [Cucurbita maxima])

HSP 1 Score: 345 bits (886), Expect = 4.73e-120
Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           MFPMVTGFMNYGQQTVRAARYIGQGF+ITLSHANRLPVTIQYPYEKLIASERFRGRIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFIITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSNSPQIEV 168
           MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS  PQIEV
Sbjct: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS--PQIEV 166

[Close]

BLAST of IVF0001913.2 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases )

HSP 1 Score: 328.9 bits (842), Expect = 2.3e-90
Identity = 151/161 (93.79%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60
           M PM+TGFMNYGQQT+RAARYIGQGFMITLSH NRLPVTIQYPYEKLI SERFRGRIHFE
Sbjct: 1   MLPMITGFMNYGQQTLRAARYIGQGFMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120
           FDKCIACEVCVRVCPIDLPVVDWKLET+IRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

Query: 121 MTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNS 162
           MTEEYE STYDRHELNYNQI+LGRLPMSV+DDYTIRTI NS
Sbjct: 121 MTEEYEFSTYDRHELNYNQIALGRLPMSVIDDYTIRTIWNS 161

[Close]

BLAST of IVF0001913.2 vs. TAIR 10
Match: AT1G16700.1 (Alpha-helical ferredoxin )

HSP 1 Score: 78.2 bits (191), Expect = 7.1e-15
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 24  QGFMITLSHANRLPVTIQYPYEKLIASERFRG-----RIHFEFDKCIACEVCVRVCPIDL 83
           +G  +TL +     VTI YP+EK   S RFRG     R     ++CIAC++C  VCP   
Sbjct: 78  RGLSLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQA 137

Query: 84  PVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYN 143
             ++ + E +   +R   Y ID   CI+CG C E CP + +     +E +T    EL Y+
Sbjct: 138 ITIEAE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYD 197

[Close]

BLAST of IVF0001913.2 vs. TAIR 10
Match: AT1G79010.1 (Alpha-helical ferredoxin )

HSP 1 Score: 78.2 bits (191), Expect = 7.1e-15
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 24  QGFMITLSHANRLPVTIQYPYEKLIASERFRG-----RIHFEFDKCIACEVCVRVCPIDL 83
           +G  +TL +     VTI YP+EK   S RFRG     R     ++CIAC++C  VCP   
Sbjct: 78  RGLSLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQA 137

Query: 84  PVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYN 143
             ++ + E +   +R   Y ID   CI+CG C E CP + +     +E +T    EL Y+
Sbjct: 138 ITIEAE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYD 197

The following BLAST results are available for this feature:

BLAST of IVF0001913.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD37	1.4e-92	99.38	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q0ZIW4	9.1e-92	95.78	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera OX=297...	[more]
Q49KU4	1.6e-91	95.78	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Eucalyptus globulus s...	[more]
Q9MTH8	1.6e-91	96.27	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Oenothera elata subsp...	[more]
A0ZZ89	2.0e-91	96.27	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gossypium barbadense ...	[more]

BLAST of IVF0001913.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4EU68	5.4e-95	100.00	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A286NFL4	5.4e-95	100.00	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo var. can...	[more]
A0A249RY38	5.4e-95	100.00	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo subsp. a...	[more]
A0A286NFV1	5.4e-95	100.00	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo var. fle...	[more]
A0A249RZ32	5.4e-95	100.00	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis melo var. dud...	[more]

BLAST of IVF0001913.2 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841839.1	3.87e-124	100.00	NADH-plastoquinone oxidoreductase subunit I [Cucumis melo subsp. melo] >YP_00986...	[more]
YP_009447590.1	1.16e-120	98.81	NADH dehydrogenase subunit I [Cucurbita moschata] >YP_009456201.1 NADH dehydroge...	[more]
QZL38649.1	1.29e-120	98.81	NADH dehydrogenase subunit I [Citrullus naudinianus]	[more]
ALO22694.1	4.73e-120	98.21	NdhI [Cucurbita pepo var. ozarkana]	[more]
YP_009447505.1	4.73e-120	98.21	NADH dehydrogenase subunit I [Cucurbita maxima] >ALO22343.1 NdhI [Cucurbita maxi...	[more]

BLAST of IVF0001913.2 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01090.1	2.3e-90	93.79	NADPH dehydrogenases	[more]
AT1G16700.1	7.1e-15	34.68	Alpha-helical ferredoxin	[more]
AT1G79010.1	7.1e-15	34.68	Alpha-helical ferredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004497	NADH-plastoquinone oxidoreductase, subunit I	TIGRFAM	TIGR00403	TIGR00403	coord: 1..163 e-value: 1.8E-101 score: 335.2
IPR004497	NADH-plastoquinone oxidoreductase, subunit I	PANTHER	PTHR47275	FAMILY NOT NAMED	coord: 1..162
None	No IPR available	GENE3D	3.30.70.3270		coord: 42..157 e-value: 2.3E-29 score: 104.2
None	No IPR available	PIRSR	PIRSR005784-1	PIRSR005784-1	coord: 60..124 e-value: 6.6E-5 score: 20.8
None	No IPR available	PANTHER	PTHR47275:SF1	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT I, CHLOROPLASTIC	coord: 1..162
None	No IPR available	SUPERFAMILY	54862	4Fe-4S ferredoxins	coord: 42..140
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PFAM	PF13187	Fer4_9	coord: 63..118 e-value: 1.4E-8 score: 34.7
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 95..124 score: 10.532633
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 55..84 score: 9.734557
IPR010226	NADH-quinone oxidoreductase, chain I	TIGRFAM	TIGR01971	TIGR01971	coord: 25..142 e-value: 9.7E-43 score: 142.6
IPR010226	NADH-quinone oxidoreductase, chain I	HAMAP	MF_01351	NDH1_NuoI	coord: 16..147 score: 23.069616
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 104..115

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0001913	IVF0001913	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001913.2-exon	IVF0001913.2-exon-tig00000662:189598..190104	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001913.2-cds	IVF0001913.2-cds-tig00000662:189598..190104	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0001913.2	IVF0001913.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0048038	quinone binding