IVF0012763 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCAAACAATTTCAACATGGCAGAACTAGAAGAGGAAAATCTCAATGAGCCCAATCAAGTTAAATCAAGTACAACAAGTCTACCTCTACAAGTTGACGGACTCGGCAACAGTTTCACTAATGAAAGATCAAAAATCACAAGCACGGTCATTGATCAAGATGATGACAAGGCTTTCAAGTTGAAATTGGTGAATTGGCTAAGAGATAACGAGCTTAAACTGTCTCCAAAATATACTTCAGAAGCCCCTAGCTCATCTACAAATCCTGTAGTGTTAATTGATGAAAACAAGCTTGTATCAGGCCATAGGCCTTGGGGGAAATGGGTAACACATGAAGGTTCTTAG ATGGATGCAAACAATTTCAACATGGCAGAACTAGAAGAGGAAAATCTCAATGAGCCCAATCAAGTTAAATCAAGTACAACAAGTCTACCTCTACAAGTTGACGGACTCGGCAACAGTTTCACTAATGAAAGATCAAAAATCACAAGCACGGTCATTGATCAAGATGATGACAAGGCTTTCAAGTTGAAATTGGTGAATTGGCTAAGAGATAACGAGCTTAAACTGTCTCCAAAATATACTTCAGAAGCCCCTAGCTCATCTACAAATCCTGTAGTGTTAATTGATGAAAACAAGCTTGTATCAGGCCATAGGCCTTGGGGGAAATGGGTAACACATGAAGGTTCTTAG ATGGATGCAAACAATTTCAACATGGCAGAACTAGAAGAGGAAAATCTCAATGAGCCCAATCAAGTTAAATCAAGTACAACAAGTCTACCTCTACAAGTTGACGGACTCGGCAACAGTTTCACTAATGAAAGATCAAAAATCACAAGCACGGTCATTGATCAAGATGATGACAAGGCTTTCAAGTTGAAATTGGTGAATTGGCTAAGAGATAACGAGCTTAAACTGTCTCCAAAATATACTTCAGAAGCCCCTAGCTCATCTACAAATCCTGTAGTGTTAATTGATGAAAACAAGCTTGTATCAGGCCATAGGCCTTGGGGGAAATGGGTAACACATGAAGGTTCTTAG MDANNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWGKWVTHEGS Homology
BLAST of IVF0012763 vs. ExPASy TrEMBL
Match: A0A5D3BPD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00780 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.7e-28 Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of IVF0012763 vs. ExPASy TrEMBL
Match: A0A5D3BYJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24967G00330 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 7.3e-11 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of IVF0012763 vs. ExPASy TrEMBL
Match: A0A5D3BKT8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005570 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of IVF0012763 vs. ExPASy TrEMBL
Match: A0A5A7US62 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003960 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.3e-09 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of IVF0012763 vs. ExPASy TrEMBL
Match: A0A5D3CA17 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00050 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.3e-09 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of IVF0012763 vs. NCBI nr
Match: TYK01064.1 (hypothetical protein E5676_scaffold264G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 134 bits (337), Expect = 3.85e-35 Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of IVF0012763 vs. NCBI nr
Match: TYK04225.1 (hypothetical protein E5676_scaffold24967G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 2.39e-13 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
BLAST of IVF0012763 vs. NCBI nr
Match: KAA0056838.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ99341.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 5.60e-12 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of IVF0012763 vs. NCBI nr
Match: KAA0035247.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK22402.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 2.66e-11 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of IVF0012763 vs. NCBI nr
Match: TYK08190.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 2.72e-11 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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