IVF0021329 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCTGACTATGGTTGCAAGATCCCTTCGAGTCCATTCCACACTCACCAAAATAATTGGATTGTCGCAGGTTCGCTTCTTTCAGCCAGATTTTACTACCAGAGACCCGAATTCCAAGCCAAAAATACACAAATATCCACCATTTTATGATCCATATGGCCCTAAGCCTTCACCCTCAGATAAAATCATTGAACTTGCTGAAAGAATTGTAACACTGCCTCCCAATGAGCGTTGCCAGATCGGTCCGACACTCTCTGAAAGACTTAGACATCCTAAGTAGCAGCCAATTTCAGTGGATGGCTTGGACGTTGGTACCGAAGGTCGAAGGAGGAGGGGCGGCAGCAGGATCGTCTAAGGCAGAGGAGAAGGAAGAAAAAACCGCATTTGATGTGAAGTTAGAGAAGTTCGACAGTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGTCTTTCACTAATCTGGGTCTCAAGGAGGCAAAAGATTTGGTTGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAAGAAGCAAATGATATCATTGAAAAAATCAAAGCTGCTGGGGGAGTTGCTGTGATGGAAGTAGTAAAATGTTCTAAAGTTAGTATTGACTTTTTGTTTATATATATCTTTTCCAACTGGGCAATTCCTAGCTTCAATCAATCACTGGATGGTGAATATTCTTCTCTAAGTTGA ATGAAGCTGACTATGGTTGCAAGATCCCTTCGAGTCCATTCCACACTCACCAAAATAATTGGATTGTCGCAGGTTCGCTTCTTTCAGCCAGATTTTACTACCAGAGACCCGAATTCCAAGCCAAAAATACACAAATATCCACCATTTTATGATCCATATGGCCCTAAGCCTTCACCCTCAGATAAAATCATTGAACTTGCTGAAAGAATTGTAACACTGCCTCCCAATGAGCGTTGCCAGATCGGAGGGGCGGCAGCAGGATCGTCTAAGGCAGAGGAGAAGGAAGAAAAAACCGCATTTGATGTGAAGTTAGAGAAGTTCGACAGTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGTCTTTCACTAATCTGGGTCTCAAGGAGGCAAAAGATTTGGTTGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAAGAAGCAAATGATATCATTGAAAAAATCAAAGCTGCTGGGGGAGTTGCTGTGATGGAAGTAGTAAAATGTTCTAAAGTTAGTATTGACTTTTTGTTTATATATATCTTTTCCAACTGGGCAATTCCTAGCTTCAATCAATCACTGGATGGTGAATATTCTTCTCTAAGTTGA ATGAAGCTGACTATGGTTGCAAGATCCCTTCGAGTCCATTCCACACTCACCAAAATAATTGGATTGTCGCAGGTTCGCTTCTTTCAGCCAGATTTTACTACCAGAGACCCGAATTCCAAGCCAAAAATACACAAATATCCACCATTTTATGATCCATATGGCCCTAAGCCTTCACCCTCAGATAAAATCATTGAACTTGCTGAAAGAATTGTAACACTGCCTCCCAATGAGCGTTGCCAGATCGGAGGGGCGGCAGCAGGATCGTCTAAGGCAGAGGAGAAGGAAGAAAAAACCGCATTTGATGTGAAGTTAGAGAAGTTCGACAGTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGTCTTTCACTAATCTGGGTCTCAAGGAGGCAAAAGATTTGGTTGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAAGAAGCAAATGATATCATTGAAAAAATCAAAGCTGCTGGGGGAGTTGCTGTGATGGAAGTAGTAAAATGTTCTAAAGTTAGTATTGACTTTTTGTTTATATATATCTTTTCCAACTGGGCAATTCCTAGCTTCAATCAATCACTGGATGGTGAATATTCTTCTCTAAGTTGA MKLTMVARSLRVHSTLTKIIGLSQVRFFQPDFTTRDPNSKPKIHKYPPFYDPYGPKPSPSDKIIELAERIVTLPPNERCQIGGAAAGSSKAEEKEEKTAFDVKLEKFDSASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIEKIKAAGGVAVMEVVKCSKVSIDFLFIYIFSNWAIPSFNQSLDGEYSSLS Homology
BLAST of IVF0021329 vs. ExPASy Swiss-Prot
Match: A2C031 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL1A) OX=167555 GN=rplL PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.9e-15 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy Swiss-Prot
Match: Q46HH2 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL2A) OX=59920 GN=rplL PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 8.4e-15 Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy Swiss-Prot
Match: A9BDG4 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=rplL PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13 Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy Swiss-Prot
Match: Q7U3T9 (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH8102) OX=84588 GN=rplL PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13 Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy Swiss-Prot
Match: P41189 (50S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-13 Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy TrEMBL
Match: A0A0A0L907 (Ribosomal_L12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G623960 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 3.7e-66 Identity = 145/193 (75.13%), Postives = 154/193 (79.79%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy TrEMBL
Match: A0A1S3BPI3 (50S ribosomal protein L7/L12 OS=Cucumis melo OX=3656 GN=LOC103492120 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 4.1e-65 Identity = 144/193 (74.61%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy TrEMBL
Match: A0A5A7U2A3 (50S ribosomal protein L7/L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00400 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 4.1e-65 Identity = 144/193 (74.61%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy TrEMBL
Match: A0A6J1DM08 (uncharacterized protein LOC111022207 OS=Momordica charantia OX=3673 GN=LOC111022207 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 9.2e-65 Identity = 141/193 (73.06%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of IVF0021329 vs. ExPASy TrEMBL
Match: A0A6J1GD07 (uncharacterized protein LOC111452831 OS=Cucurbita moschata OX=3662 GN=LOC111452831 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 2.3e-63 Identity = 138/193 (71.50%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of IVF0021329 vs. NCBI nr
Match: XP_038905834.1 (50S ribosomal protein L7/L12 [Benincasa hispida] >XP_038905841.1 50S ribosomal protein L7/L12 [Benincasa hispida]) HSP 1 Score: 263 bits (671), Expect = 2.92e-86 Identity = 145/193 (75.13%), Postives = 153/193 (79.27%), Query Frame = 0
BLAST of IVF0021329 vs. NCBI nr
Match: XP_011651634.1 (uncharacterized protein LOC101206962 [Cucumis sativus] >XP_011651635.1 uncharacterized protein LOC101206962 [Cucumis sativus] >KGN58328.1 hypothetical protein Csa_017468 [Cucumis sativus]) HSP 1 Score: 261 bits (666), Expect = 1.68e-85 Identity = 145/193 (75.13%), Postives = 154/193 (79.79%), Query Frame = 0
BLAST of IVF0021329 vs. NCBI nr
Match: XP_008450561.1 (PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450569.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450588.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450597.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_016902379.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >KAA0047609.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa] >TYK08266.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa]) HSP 1 Score: 257 bits (657), Expect = 3.94e-84 Identity = 144/193 (74.61%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of IVF0021329 vs. NCBI nr
Match: XP_022155073.1 (uncharacterized protein LOC111022207 [Momordica charantia] >XP_022155074.1 uncharacterized protein LOC111022207 [Momordica charantia]) HSP 1 Score: 256 bits (654), Expect = 1.13e-83 Identity = 141/193 (73.06%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of IVF0021329 vs. NCBI nr
Match: XP_022949504.1 (uncharacterized protein LOC111452831 [Cucurbita moschata]) HSP 1 Score: 251 bits (642), Expect = 7.53e-82 Identity = 138/193 (71.50%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of IVF0021329 vs. TAIR 10
Match: AT3G06040.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 186.0 bits (471), Expect = 2.9e-47 Identity = 108/189 (57.14%), Postives = 129/189 (68.25%), Query Frame = 0
BLAST of IVF0021329 vs. TAIR 10
Match: AT3G06040.2 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 186.0 bits (471), Expect = 2.9e-47 Identity = 108/189 (57.14%), Postives = 129/189 (68.25%), Query Frame = 0
BLAST of IVF0021329 vs. TAIR 10
Match: AT3G06040.3 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 186.0 bits (471), Expect = 2.9e-47 Identity = 108/189 (57.14%), Postives = 129/189 (68.25%), Query Frame = 0
BLAST of IVF0021329 vs. TAIR 10
Match: AT4G36420.1 (Ribosomal protein L12 family protein ) HSP 1 Score: 101.3 bits (251), Expect = 9.5e-22 Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 0
BLAST of IVF0021329 vs. TAIR 10
Match: AT4G37660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21 Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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