IVF0009054 (gene) Melon (IVF77) v1

Overview


Name	IVF0009054
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTERF5
Location	chr10: 4550372 .. 4550824 (-)
RNA-Seq Expression	IVF0009054
Synteny	IVF0009054

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTTTATGCAGTTTTTGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAGTAACTGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAAGATCCAAATTATTTAGCTTGTTCAGAGGAGAAAATGAGGAATGTTACAGATTTCTGTTTCAACACTGCAAAGTTGGATCCTGGAACCGTAATTTCTTACCCTGTGTTCTTCAAGTTGTCGGTCAACAAGCGGCTCCGACTGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTCCTCAAGAACAAAAAGGTTGCTCTTGCTGGGTGGTTTGTGCAAGGGGAGAGAGAATTTGTGGAGAAGAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCTGAAACCAAATATGTTTCATAG

mRNA sequence

ATGTTTGTTTATGCAGTTTTTGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAGTAACTGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAAGATCCAAATTATTTAGCTTGTTCAGAGGAGAAAATGAGGAATGTTACAGATTTCTGTTTCAACACTGCAAAGTTGGATCCTGGAACCGTAATTTCTTACCCTGTGTTCTTCAAGTTGTCGGTCAACAAGCGGCTCCGACTGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTCCTCAAGAACAAAAAGGTTGCTCTTGCTGGGTGGTTTGTGCAAGGGGAGAGAGAATTTGTGGAGAAGAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCTGAAACCAAATATGTTTCATAG

Coding sequence (CDS)

ATGTTTGTTTATGCAGTTTTTGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAGTAACTGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAAGATCCAAATTATTTAGCTTGTTCAGAGGAGAAAATGAGGAATGTTACAGATTTCTGTTTCAACACTGCAAAGTTGGATCCTGGAACCGTAATTTCTTACCCTGTGTTCTTCAAGTTGTCGGTCAACAAGCGGCTCCGACTGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTCCTCAAGAACAAAAAGGTTGCTCTTGCTGGGTGGTTTGTGCAAGGGGAGAGAGAATTTGTGGAGAAGAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCTGAAACCAAATATGTTTCATAG

Protein sequence

MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

Homology

[Close]

BLAST of IVF0009054 vs. ExPASy TrEMBL
Match: A0A5D3CV71 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003150 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.2e-79
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF
Sbjct: 34  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 93

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV
Sbjct: 94  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 153

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 151
           EKNVVKHLDEIPNLMDIYRGNDASETKYVS
Sbjct: 154 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 183

[Close]

BLAST of IVF0009054 vs. ExPASy TrEMBL
Match: A0A5A7SYC3 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003050 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MF YAVFVRLSMSDSTWKKKVTVMKSLGWSE EIFTAFKKDPNYL CSE+KMR+V DFCF
Sbjct: 226 MFAYAVFVRLSMSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCF 285

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYPVFFK SV+KRLR RYKVLEVLKVKNLLKNKK+ALA WF QGEREFV
Sbjct: 286 NTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFV 345

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 151
           + NVVKHLDEIPNLMDIYRGNDASETK VS
Sbjct: 346 QNNVVKHLDEIPNLMDIYRGNDASETKSVS 375

[Close]

BLAST of IVF0009054 vs. ExPASy TrEMBL
Match: A0A1S3CSA2 (uncharacterized protein LOC103504258 OS=Cucumis melo OX=3656 GN=LOC103504258 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MF YAVFVRLSMSDSTWKKKVTVMKSLGWSE EIFTAFKKDPNYL CSE+KMR+V DFCF
Sbjct: 19  MFAYAVFVRLSMSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCF 78

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYPVFFK SV+KRLR RYKVLEVLKVKNLLKNKK+ALA WF QGEREFV
Sbjct: 79  NTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFV 138

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 151
           + NVVKHLDEIPNLMDIYRGNDASETK VS
Sbjct: 139 QNNVVKHLDEIPNLMDIYRGNDASETKSVS 168

[Close]

BLAST of IVF0009054 vs. ExPASy TrEMBL
Match: A0A5A7SY07 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002660 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.0e-70
Identity = 133/150 (88.67%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MFVYAV VRLSMSDSTWKKK+TVMKSLGWSE EIFTAFKKDP YL CSEEKMR+V DFCF
Sbjct: 226 MFVYAVIVRLSMSDSTWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCF 285

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYP+FFKLSV+KRLRLRYKVLEVLKVKNLLKN+K+ L GWF+QGEREFV
Sbjct: 286 NTAKLDPGTVISYPMFFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFV 345

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 151
           + NVVKHLDEIPNLMDIYRGNDASETK VS
Sbjct: 346 KNNVVKHLDEIPNLMDIYRGNDASETKSVS 375

[Close]

BLAST of IVF0009054 vs. ExPASy TrEMBL
Match: A0A5D3CWQ9 (Transcription termination factor MTERF9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003040 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MFV A+  R+ MSDSTW KK+ VMKSLGWSE EIFTAF++ P  LACSEEKMRNVTDFCF
Sbjct: 226 MFVDALKARIGMSDSTWNKKINVMKSLGWSEKEIFTAFRRYPLCLACSEEKMRNVTDFCF 285

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV
Sbjct: 286 NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 345

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 151
           EKNVVKHLDEIPNLMDIYRGNDASETKYVS
Sbjct: 346 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 375

[Close]

BLAST of IVF0009054 vs. NCBI nr
Match: KAA0034109.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15811.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 301 bits (772), Expect = 9.91e-103
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF
Sbjct: 34  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 93

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV
Sbjct: 94  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 153

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 150
           EKNVVKHLDEIPNLMDIYRGNDASETKYVS
Sbjct: 154 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 183

[Close]

BLAST of IVF0009054 vs. NCBI nr
Match: XP_008466910.1 (PREDICTED: uncharacterized protein LOC103504258 [Cucumis melo])

HSP 1 Score: 273 bits (697), Expect = 1.60e-91
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MF YAVFVRLSMSDSTWKKKVTVMKSLGWSE EIFTAFKKDPNYL CSE+KMR+V DFCF
Sbjct: 19  MFAYAVFVRLSMSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCF 78

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYPVFFK SV+KRLR RYKVLEVLKVKNLLKNKK+ALA WF QGEREFV
Sbjct: 79  NTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFV 138

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 150
           + NVVKHLDEIPNLMDIYRGNDASETK VS
Sbjct: 139 QNNVVKHLDEIPNLMDIYRGNDASETKSVS 168

[Close]

BLAST of IVF0009054 vs. NCBI nr
Match: KAA0034119.1 (transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15801.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (697), Expect = 1.40e-88
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MF YAVFVRLSMSDSTWKKKVTVMKSLGWSE EIFTAFKKDPNYL CSE+KMR+V DFCF
Sbjct: 226 MFAYAVFVRLSMSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCF 285

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYPVFFK SV+KRLR RYKVLEVLKVKNLLKNKK+ALA WF QGEREFV
Sbjct: 286 NTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFV 345

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 150
           + NVVKHLDEIPNLMDIYRGNDASETK VS
Sbjct: 346 QNNVVKHLDEIPNLMDIYRGNDASETKSVS 375

[Close]

BLAST of IVF0009054 vs. NCBI nr
Match: KAA0034157.1 (transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15762.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 272 bits (695), Expect = 2.81e-88
Identity = 133/150 (88.67%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MFVYAV VRLSMSDSTWKKK+TVMKSLGWSE EIFTAFKKDP YL CSEEKMR+V DFCF
Sbjct: 226 MFVYAVIVRLSMSDSTWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCF 285

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYP+FFKLSV+KRLRLRYKVLEVLKVKNLLKN+K+ L GWF+QGEREFV
Sbjct: 286 NTAKLDPGTVISYPMFFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFV 345

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 150
           + NVVKHLDEIPNLMDIYRGNDASETK VS
Sbjct: 346 KNNVVKHLDEIPNLMDIYRGNDASETKSVS 375

[Close]

BLAST of IVF0009054 vs. NCBI nr
Match: KAA0034120.1 (transcription termination factor MTERF9 [Cucumis melo var. makuwa] >TYK15800.1 transcription termination factor MTERF9 [Cucumis melo var. makuwa])

HSP 1 Score: 270 bits (690), Expect = 1.61e-87
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           MFV A+  R+ MSDSTW KK+ VMKSLGWSE EIFTAF++ P  LACSEEKMRNVTDFCF
Sbjct: 226 MFVDALKARIGMSDSTWNKKINVMKSLGWSEKEIFTAFRRYPLCLACSEEKMRNVTDFCF 285

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 120
           NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV
Sbjct: 286 NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFV 345

Query: 121 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 150
           EKNVVKHLDEIPNLMDIYRGNDASETKYVS
Sbjct: 346 EKNVVKHLDEIPNLMDIYRGNDASETKYVS 375

[Close]

BLAST of IVF0009054 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.7e-15
Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 15  STWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYP 74
           S W K   V +  GWSE++I  AFKK P+ +  SE K+    ++  N   + P ++   P
Sbjct: 277 SIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCP 336

Query: 75  VFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNL 134
           V    S+ KR+  R  V +VL V N L  +  +L    V  E+ F+EK V+K+ +E+P L
Sbjct: 337 VVLFFSLEKRIIPRCSVTKVL-VSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPEL 396

Query: 135 MDIYRG 141
           M++Y G
Sbjct: 397 MNLYLG 401

[Close]

BLAST of IVF0009054 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 71.6 bits (174), Expect = 5.9e-13
Identity = 39/140 (27.86%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 2   FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFN 61
           FV+A+      S+S  ++K  + +  GWS+ +   A  + PN +  S+EK+    ++  N
Sbjct: 250 FVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVN 309

Query: 62  TAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVE 121
              L    +++ PV   LS+ KR++ R +V+ +L  K L+K + +           EF++
Sbjct: 310 NIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMD 369

Query: 122 KNVVKHLDEIPNLMDIYRGN 142
           K V+K+ DE+P L+  +  N
Sbjct: 370 KFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of IVF0009054 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 68.6 bits (166), Expect = 5.0e-12
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 1   MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCF 60
           M V+AV    S+S+ T+ +KV +  + G+SE+EI    ++ P  + CSE+K+    +F  
Sbjct: 234 MLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYL 293

Query: 61  NTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLL---KNKKVALAGWFVQGER 120
               L+   +   P     ++ KR+  R KVL++L+ K LL   + KK  + G     E 
Sbjct: 294 KRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEE 353

Query: 121 EFVEKNVVKHLDEI 132
            F+EK VV+  DEI
Sbjct: 354 AFLEKYVVRFGDEI 367

[Close]

BLAST of IVF0009054 vs. TAIR 10
Match: AT1G62010.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-08
Identity = 48/182 (26.37%), Postives = 76/182 (41.76%), Query Frame = 0


Query: 2   FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRN------- 61
           FV+A+ +   MSD T ++K+ V +S+G+S ++++  FKK P  L  SE+K+ N       
Sbjct: 226 FVHALHMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLG 285

Query: 62  ----------------------------VTDFCFNTAKLDPGTVISYPVFFKLSVNKRLR 121
                                        T+F           V S P     S+ KR  
Sbjct: 286 LGFSRDVFMMMFKRFPPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTV 345

Query: 122 LRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVEKNVVKHLDE--IPNLMDIYRGNDAS 147
            R  V++VL  K LL+++   ++         F+   V KH D+  +  LM I+ GN  S
Sbjct: 346 PRCNVIKVLMSKGLLESELPPMSSVLTSTSESFLNLYVSKHDDKQLVAELMAIFTGNRVS 405

[Close]

BLAST of IVF0009054 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.8e-08
Identity = 45/177 (25.42%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 2   FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKM--------- 61
           FV A+ V   M++ T ++KV + KSLG+   +++++FKK P  L  SE+KM         
Sbjct: 242 FVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLG 301

Query: 62  --------------------------RNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLR 121
                                     +  T+F           V+S P  F  S+ KR+ 
Sbjct: 302 LGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIV 361

Query: 122 LRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVEKNVVKHLDE--IPNLMDIYRGN 142
            R  V++ L  K L++N+  +++   +  ++ F+ + V  H+D+  +  LM IYR +
Sbjct: 362 PRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYRAS 418

The following BLAST results are available for this feature:

BLAST of IVF0009054 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CV71	8.2e-79	100.00	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SYC3	4.1e-70	90.00	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CSA2	4.1e-70	90.00	uncharacterized protein LOC103504258 OS=Cucumis melo OX=3656 GN=LOC103504258 PE=...	[more]
A0A5A7SY07	7.0e-70	88.67	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CWQ9	2.7e-69	90.00	Transcription termination factor MTERF9 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of IVF0009054 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034109.1	9.91e-103	100.00	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15811.1 t...	[more]
XP_008466910.1	1.60e-91	90.00	PREDICTED: uncharacterized protein LOC103504258 [Cucumis melo]	[more]
KAA0034119.1	1.40e-88	90.00	transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15801.1 t...	[more]
KAA0034157.1	2.81e-88	88.67	transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15762.1 t...	[more]
KAA0034120.1	1.61e-87	90.00	transcription termination factor MTERF9 [Cucumis melo var. makuwa] >TYK15800.1 t...	[more]

BLAST of IVF0009054 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	3.7e-15	35.71	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	5.9e-13	27.86	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	5.0e-12	32.84	Mitochondrial transcription termination factor family protein	[more]
AT1G62010.1	5.7e-08	26.37	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	9.8e-08	25.42	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 3..133 e-value: 7.6E-24 score: 86.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 7..105 e-value: 4.1E-14 score: 52.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..142
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009054.2	IVF0009054.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding