IVF0001016 (gene) Melon (IVF77) v1

Overview


Name	IVF0001016
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr10: 6952930 .. 6958862 (-)
RNA-Seq Expression	IVF0001016
Synteny	IVF0001016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGTTGAACGAGAAGTTTTTCAAAATACAAGAAAAAAATATCAAAAGGCTCTCACCATCATTCATCAAGCCATTAATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGAAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGCCTTCAAAATTGAGAGATGATTACGAATCACTACATATGAAGGAGTCTGGATCAGTTTCAGATTATACTTCAAGATTGCTAGTAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTGGATAAAAATTTAATTTCATCATTGTAGCTATTGAAGAATCAAAGGATTTGAGTAAAATGTCCATTAATCGACTTATGGGTTCTTTACAAGTCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAATCAAAGTTGAAATTAAAAGACAAGGAAGACAACCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGATTTCAAAGTCGAGGTTGAGGAAGCTACGGTCAAAGAAAATTTGATAAAAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAATTGGGGAAAGATCAAATAATGACAGGAGGTATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTGTTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCAGAAACATGTGAAAACAGTGCATGGTATCTCGATAGCGGTGCAAGCAATCACAAGTGTGGAACTAAATCAATGTTCGTGGAATTTGATGAATCTGTTGGTGGCAATATCGTATTTGGTGATGCCACAAAAATTCCAATTAAAGAAAAAGTAAAATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTTTAACATTTATTATGTGCCTAGTATGAAGAACAACATTTTGAGTTTGGGGTAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGCCTTTTGATTAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGGCGAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTAAATGTTTAAAGTCATGTTTGAAAGATCCCAATGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGAATATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTAAAATATCCAGATCAACTTTGTGAAGGTTGTCTTCATGTCAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTCGAGAGTAAGGAGACCACTGGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGCCGAAAAACTTAGGTTTACATTGTCAAGGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTGCATTAAAGCTTTGAGATTAGACAGGGGAGATGAATTCACTTCAAATGAATTCAAAACTTTTTGCGCAGAAAATGGAATCCGTCGACCTATGACAATTGCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTTGAAGCATGTAGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTGCCCTACTAGAAGCTTATGGAACAAAACTCCTGAAGAAGCATGGATAGGAAGAAAACCATCCATTGGTTATTTGAGAGTATTCGGATGCATGGCTTATGCGTATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTTTTTGTTGGCTATGATGCAAGCTCAAAAGTCTACAAGTTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTATAAAATTTTGTTTTTTCCTGAAGATCGTGATGAGCCTAGTGATATTGCTTCTCCACCAACATTGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGCGCCTTGTAGCATGAGAAGCTTACGAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGACAATGAACCTTTGAATTTTGAAGAAGCTTCACAAAATGACAAATGGACGATAGTTATGGATGAAGAGATAAAAGTCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAATAGGTGTCAAATGAGTTTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGAATATTCTCAAAGTAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACTATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAAATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTATAACAACCTCCTAATTATTCTGTGAAAGGCCAAGAGGATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAACATAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGCCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTACAAGTATGTTTAAAGATCTCAAGAACGCGATGACCCAAGAATTCGAAATGACAGATATAGGGCTAATGTCATATTATCTTAGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTTAATATGATGAATTCTAAGTCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCTTTCATATTTCAAAAGTTTGGTTAGGAGTTTGAGATATTTGACTTGCACACAACCAGATATTCTTTTCAGAGTTGGATTGGTGAGTCTATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTTAGAGGTACGCTTGACTATAGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGATTGGGCTGGAGATACTGATGATCGAAAGAGCACTAGTCAATATGTTTTCTTCGTTGGGAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTGTGAGGCACAATACGTTGTTACAACTTCATGTGTTTGTCATGCAGTTTGGTTAAGAAATTTGTTAAAGACAGTTGGAATTTTGCAAGATGATCCAACTGTGATTTGTGTAGACAATTAGTCAACAATTGCTTTAGCAAAGAATCCTATGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTTCATCAGAGATTGCATTTCAAGGAAGGAGCTTCAAGTTGAATATGTGAAGACTGAAGATCAAATTGCAGATATTTTTACGAAGTCACTCAAAGTTACTGTGTTTAACAACTTAAGAACTTTTCTTGGAGTTTTTTCAAAAAAAAACATGTTTAAGGGAGGATGTTGAAAATTAAACATGTTTTAAATAAATAAGTTATATGTGAGTTAATTTATGTAAGTTAGAGAAGGATGTGAGTTTAAAATGTTAGAGTTAATTTAGTAAGAGTTTCACCTTAGTTAAATGTAGGATTTAATTTGTTGTATTTAACTGTGATATGAGTTATTCTTATGACAATCCTATAGATAGGATTGAAATGTTGTAATCTAAATTATCCAAGTGTGAGTTGAATACACACAACAAGTCTTCCAAAAAAGTTTTTGTTTTCTATCAAATATTCTATTTGGTGATTATTTATTTGGGGTGTTCATCAAATGTTTCCAACACACAAATATATTATAACCATATCTCATTTTTCGGAACTGCACGTCATTGAGAAATATACAAGGGAGATAATATATTATAAGACTCAGATAAGTATCATAATTACAAAAGTATGGGTCTCTTAAAATATTAATAATAATTACAGACGAGTTTGGATTTAGAACTCTAAAATGTTGCATTGATGATAATCAGCTAGCCCCCATCAATCATTGAAACTCGTAGCCCAAAGGTCTATTATCGAAGCTCAACTCTTGCCCGATTCAAAGTTATCTCAAAACCAAAATTTGGTCGACCCTACCCAATCCCCAACTCATTCATTTGTTAGATTGAATATGACTTACTCTTTTGGATGGTGCTCGTTTAGACCTAAAAAGTTATGTGTGTGTATCTATTAGATTTTTTTCATAAACATTTTTATTAATTAATTTTGACATCATAGTTTTTAGTTAATAAATACAGGAGAATTGTAAAAAATGGTAAATTTGACCAAATATTTATAAAATATAACAAAATTTCATATTCTATCAATAATATACATCGATAGAGACTGATATATTTTTATTAGTGACATTGATAGACAATTATAAAAGTTTATTAATTTCTATCATTGAGAATCTAAAGTTCGGCTATAATTTGTAAATATTTTGGTTTATTTGAGTTCTGTTGAATGTTGGGTCAGGGCTTAGATGTAAGGAGTGTGTTTTTGTAACGCCCCAAATTTAAGGTAAATTATTTTTAATTATCTTAAGTTTAAATTTGGTAATTTTGGGTGTTATTTGGTTGATTATTTGATTTATGAAGATTGAATTTTATGAGATATTAGTTAAATATCTAATTGTTTTAGTGTTTGGAGTTTATGAATTAATTTGTTGTATTTGAGAAAATTTGATTAATTATATGGTTGATTGTATAATAATTGAATTTTGAAGGTAAGATAATTATATTATGTGGATAATATAATTAAGTAGAGGTATTTATTTTTGAAAAATAAAAATGATTAGTTTGGAGAGAGAGGGAAATTTGAGTTTAAAGGGGGATTAATGGGTTTTAAATGAAGAGAGTGTGTGTAAGTTTTTGAAAAAGAAAAGGAAATAATAATAATTTATTATTCTTATTTCATTAAATTGGGTCAACACTATTCATCTTAAAAAAAAAAAAAAACCCTAACTCATTAACCTTCGAACCGTAGCCACTGCTTACCTCCGTCGTGCACATCCTCCACCTCCGTTCCACAACCACATCTTTTCACCAAGCTGATCTTTTTTGTAGCCAATCGCTGTGTCGCACCGCCTTCTTCCAGTAGCTGTCGACGGGCCTTATTGCACCGTCCGTGCATCGTCGATCGAAGCCCAGCCTTAAGATCGTCTGCTGGTGATCGAGCCGATCATCCCCGTCTCATCAGTCGTCCACCTTTTGTCGAGCTTCGTCAGTCGTCCGCTAGCCTACCCGAGGCACTTCTACGCACGTCGGAGCCAAGCCATCCTTCGAAGCCCGTAGCGTCAGCCCTTCGTCCACACCTCACGAGTCGCTTCCTCGGTCGGGCCGCGGAGCCACGAGTGAGCAAGCCCTACCTGCGCGAGCCGTACCCATCCGCAAGCCACACACGTGTCCTTTAG

mRNA sequence

ATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGTTGAACGAGAAGTTTTTCAAAATACAAGAAAAAAATATCAAAAGGCTCTCACCATCATTCATCAAGCCATTAATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGAAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGATTTGAGTAAAATGTCCATTAATCGACTTATGGGTTCTTTACAAGTCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAATCAAAGTTGAAATTAAAAGACAAGGAAGACAACCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGATTTCAAAGTCGAGGTTGAGGAAGCTACGGTCAAAGAAAATTTGATAAAAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAATTGGGGAAAGATCAAATAATGACAGGAGGTATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTGTTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTGCCCTACTAGAAGCTTATGGAACAAAACTCCTGAAGAAGCATGGATAGGAAGAAAACCATCCATTGGTTATTTGAGAGTATTCGGATGCATGGCTTATGCGTATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTTTTTGTTGGCTATGATGCAAGCTCAAAAGTCTACAAGTTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTATAAAATTTTGTTTTTTCCTGAAGATCGTGATGAGCCTAGTGATATTGCTTCTCCACCAACATTGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGCGCCTTGTAGCATGAGAAGCTTACGAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGACAATGAACCTTTGAATTTTGAAGAAGCTTCACAAAATGACAAATGGACGATAGTTATGGATGAAGAGATAAAAGTCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAATAGGAAATTGTACAAGTATGTTTAAAGATCTCAAGAACGCGATGACCCAAGAATTCGAAATGACAGATATAGGGCTAATGTCATATTATCTTAGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTTAATATGATGAATTCTAAGTCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCTTTCATATTTCAAAAGTTTGGTTAGGAGTTTGAGATATTTGACTTGCACACAACCAGATATTCTTTTCAGAGTTGGATTGGTGAGTCTATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTTAGAGGTACGCTTGACTATAGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGATTGGGCTGGAGATACTGATGATCGAAAGAGCACTAGTCAATATGTTTTCTTCGTTGGGAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTCCAATCGCTGTGTCGCACCGCCTTCTTCCAGTAGCTGTCGACGGGCCTTATTGCACCGTCCGTGCATCGTCGATCGAAGCCCAGCCTTAAGATCGTCTGCTGGTGATCGAGCCGATCATCCCCGTCTCATCAGTCGTCCACCTTTTGTCGAGCTTCGTCAGTCGTCCGCTAGCCTACCCGAGGCACTTCTACGCACGTCGGAGCCAAGCCATCCTTCGAAGCCCGTAGCGTCAGCCCTTCGTCCACACCTCACGAGTCGCTTCCTCGGTCGGGCCGCGGAGCCACGAGTGAGCAAGCCCTACCTGCGCGAGCCGTACCCATCCGCAAGCCACACACGTGTCCTTTAG

Coding sequence (CDS)

ATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGTTGAACGAGAAGTTTTTCAAAATACAAGAAAAAAATATCAAAAGGCTCTCACCATCATTCATCAAGCCATTAATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGAAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGATTTGAGTAAAATGTCCATTAATCGACTTATGGGTTCTTTACAAGTCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAATCAAAGTTGAAATTAAAAGACAAGGAAGACAACCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGATTTCAAAGTCGAGGTTGAGGAAGCTACGGTCAAAGAAAATTTGATAAAAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAATTGGGGAAAGATCAAATAATGACAGGAGGTATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTGTTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTGCCCTACTAGAAGCTTATGGAACAAAACTCCTGAAGAAGCATGGATAGGAAGAAAACCATCCATTGGTTATTTGAGAGTATTCGGATGCATGGCTTATGCGTATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTTTTTGTTGGCTATGATGCAAGCTCAAAAGTCTACAAGTTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTATAAAATTTTGTTTTTTCCTGAAGATCGTGATGAGCCTAGTGATATTGCTTCTCCACCAACATTGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGCGCCTTGTAGCATGAGAAGCTTACGAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGACAATGAACCTTTGAATTTTGAAGAAGCTTCACAAAATGACAAATGGACGATAGTTATGGATGAAGAGATAAAAGTCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAATAGGAAATTGTACAAGTATGTTTAAAGATCTCAAGAACGCGATGACCCAAGAATTCGAAATGACAGATATAGGGCTAATGTCATATTATCTTAGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTTAATATGATGAATTCTAAGTCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCTTTCATATTTCAAAAGTTTGGTTAGGAGTTTGAGATATTTGACTTGCACACAACCAGATATTCTTTTCAGAGTTGGATTGGTGAGTCTATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTTAGAGGTACGCTTGACTATAGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGATTGGGCTGGAGATACTGATGATCGAAAGAGCACTAGTCAATATGTTTTCTTCGTTGGGAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTCCAATCGCTGTGTCGCACCGCCTTCTTCCAGTAGCTGTCGACGGGCCTTATTGCACCGTCCGTGCATCGTCGATCGAAGCCCAGCCTTAAGATCGTCTGCTGGTGATCGAGCCGATCATCCCCGTCTCATCAGTCGTCCACCTTTTGTCGAGCTTCGTCAGTCGTCCGCTAGCCTACCCGAGGCACTTCTACGCACGTCGGAGCCAAGCCATCCTTCGAAGCCCGTAGCGTCAGCCCTTCGTCCACACCTCACGAGTCGCTTCCTCGGTCGGGCCGCGGAGCCACGAGTGAGCAAGCCCTACCTGCGCGAGCCGTACCCATCCGCAAGCCACACACGTGTCCTTTAG

Protein sequence

MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKKDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKEDNLEKGNRGRGRGDFKVEVEEATVKENLIKVIQTQIHQEVEEDNIIRGQLGKDQIMTGGMTKDRLNVIIVINSAIVLGNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQSSASLPEALLRTSEPSHPSKPVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRVL

Homology

[Close]

BLAST of IVF0001016 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.3e-43
Identity = 166/646 (25.70%), Postives = 253/646 (39.16%), Query Frame = 0


Query: 208  NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGR 267
            N   E     I+ +     +  K+PK FW +AV+ A YL NR P+  L  + PE  W  +
Sbjct: 582  NGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNK 641

Query: 268  KPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRD 327
            + S  +L+VFGC A+A++P ++R+KLDDKS   +F+GY      Y+ ++PV KK I SRD
Sbjct: 642  EVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRD 701

Query: 328  VVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCS 387
            VVF E       D  E  K    P     PS   +P     T  +ST+   +   E P  
Sbjct: 702  VVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNP-----TSAESTTDEVSEQGEQPGE 761

Query: 388  MRSLRDIYDE-TEEL----------------------SQSFNNLTLFCLFGDNEPLNFEE 447
            +    +  DE  EE+                      S+ + +     +  D EP + +E
Sbjct: 762  VIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKE 821

Query: 448  A---SQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI-----------GNC------- 507
                 + ++    M EE++ ++KN T++L  LP GK+ +           G+C       
Sbjct: 822  VLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKA 881

Query: 508  ------------------------------------------------------------ 567
                                                                        
Sbjct: 882  RLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEI 941

Query: 568  ------------------------------------------------------------ 627
                                                                        
Sbjct: 942  YMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKR 1001

Query: 628  ----------------------TSMFKDLKNAMTQEFEMTDIGLMSYYLSIEV--KQSEE 658
                                    +   LK  +++ F+M D+G     L +++  +++  
Sbjct: 1002 FSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSR 1061

[Close]

BLAST of IVF0001016 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.0e-36
Identity = 83/209 (39.71%), Postives = 124/209 (59.33%), Query Frame = 0


Query: 461  GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMN 520
            GN T + K   +A++Q F + +   + Y+L IE K+  +G+ +SQ RYT ++L + NM+ 
Sbjct: 1141 GNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLT 1200

Query: 521  SKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPT 580
            +K VATP+ T  KL+ H      D + ++ +V SL+YL  T+PD+ + V  +S +M  PT
Sbjct: 1201 AKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPT 1260

Query: 581  TTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNT 640
              H    KR+LRYL GT D+ +F        L  Y D+DWAGDTDD  ST+ Y+ ++G+ 
Sbjct: 1261 DDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHH 1320

Query: 641  AFTWSSKKQPIVTLSTSN---RCVAPPSS 667
              +WSSKKQ  V  S++    R VA  SS
Sbjct: 1321 PISWSSKKQKGVVRSSTEAEYRSVANTSS 1349

[Close]

BLAST of IVF0001016 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 6.8e-33
Identity = 80/209 (38.28%), Postives = 120/209 (57.42%), Query Frame = 0


Query: 461  GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMN 520
            GN  ++  +  + ++Q F + D   + Y+L IE K+   G+ +SQ RY  ++L + NM+ 
Sbjct: 1158 GNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMIT 1217

Query: 521  SKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPT 580
            +K V TP+    KLS +      D + ++ +V SL+YL  T+PDI + V  +S FM  PT
Sbjct: 1218 AKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPT 1277

Query: 581  TTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNT 640
              HL+  KRILRYL GT ++ +F        L  Y D+DWAGD DD  ST+ Y+ ++G+ 
Sbjct: 1278 EEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHH 1337

Query: 641  AFTWSSKKQPIVTLSTSN---RCVAPPSS 667
              +WSSKKQ  V  S++    R VA  SS
Sbjct: 1338 PISWSSKKQKGVVRSSTEAEYRSVANTSS 1366

HSP 2 Score: 79.3 bits (194), Expect = 2.1e-13
Identity = 60/185 (32.43%), Postives = 85/185 (45.95%), Query Frame = 0


Query: 231 MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKR 290
           +PK +W  A   AVYL NR PT  L  ++P +   G  P+   LRVFGC  Y ++    +
Sbjct: 645 IPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQ 704

Query: 291 SKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEP-EDYKILF 350
            KLDDKS + VF+GY  +   Y   +  T +  +SR V FDE      N  P  +Y    
Sbjct: 705 HKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDE------NCFPFSNYLATL 764

Query: 351 FP--EDRDEPSDIASPPT-----LPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELS 408
            P  E R E S + SP T      P+ P  S S    +++         R+    +  L 
Sbjct: 765 SPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLD 823

[Close]

BLAST of IVF0001016 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.2e-30
Identity = 68/199 (34.17%), Postives = 120/199 (60.30%), Query Frame = 0


Query: 461 GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMN 520
           G+  ++   L   ++  F M D+G + Y+L I++K    G+F+SQ +Y  +IL    M++
Sbjct: 14  GSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLD 73

Query: 521 SKSVAT--PIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMES 580
            K ++T  P++  + +S  +  D  D   F+S+V +L+YLT T+PDI + V +V   M  
Sbjct: 74  CKPMSTPLPLKLNSSVSTAKYPDPSD---FRSIVGALQYLTLTRPDISYAVNIVCQRMHE 133

Query: 581 PTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVG 640
           PT     + KR+LRY++GT+ + L+   + +  ++ +CDSDWAG T  R+ST+ +  F+G
Sbjct: 134 PTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLG 193

Query: 641 NTAFTWSSKKQPIVTLSTS 658
               +WS+K+QP V+ S++
Sbjct: 194 CNIISWSAKRQPTVSRSST 209

[Close]

BLAST of IVF0001016 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 119.0 bits (297), Expect = 2.3e-25
Identity = 68/203 (33.50%), Postives = 118/203 (58.13%), Query Frame = 0


Query: 459  AIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNM 518
            A G+ T M  + K  + ++F MTD+  + +++ I ++  E+ I++SQ  Y ++IL KFNM
Sbjct: 1094 ATGDMTRM-NNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNM 1153

Query: 519  MNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRY-LTCTQPDILFRVGLVSLFME 578
             N  +V+TP+ +          +D + +  +SL+  L Y + CT+PD+   V ++S +  
Sbjct: 1154 ENCNAVSTPLPSKINYELLNSDEDCN-TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSS 1213

Query: 579  SPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEF--KLEGYCDSDWAGDTDDRKSTSQYVF 638
               +   +  KR+LRYL+GT+D +L +  +  F  K+ GY DSDWAG   DRKST+ Y+F
Sbjct: 1214 KNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLF 1273

Query: 639  FVGN-TAFTWSSKKQPIVTLSTS 658
             + +     W++K+Q  V  S++
Sbjct: 1274 KMFDFNLICWNTKRQNSVAASST 1294

[Close]

BLAST of IVF0001016 vs. ExPASy TrEMBL
Match: A0A5D3E4P4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold267G00250 PE=4 SV=1)

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 0


Query: 231 MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKR 290
           MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKR
Sbjct: 1   MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKR 60

Query: 291 SKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFF 350
           SKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFF
Sbjct: 61  SKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFF 120

Query: 351 PEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTL 410
           PEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTL
Sbjct: 121 PEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTL 180

Query: 411 FCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDL 470
           FCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDL
Sbjct: 181 FCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDL 240

Query: 471 KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET 530
           KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET
Sbjct: 241 KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET 300

Query: 531 GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRI 590
           GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRI
Sbjct: 301 GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRI 360

Query: 591 LRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQP 650
           LRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQP
Sbjct: 361 LRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQP 420

Query: 651 IVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQ 710
           IVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQ
Sbjct: 421 IVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQ 480

Query: 711 SSASLPEALLRTSEPSHPSKPVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRV 770
           SSASLPEALLRTSEPSHPSKPVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRV
Sbjct: 481 SSASLPEALLRTSEPSHPSKPVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRV 540

Query: 771 L 772
           L
Sbjct: 541 L 541

[Close]

BLAST of IVF0001016 vs. ExPASy TrEMBL
Match: A0A5A7SRM0 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G002060 PE=4 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 1.6e-250
Identity = 552/1087 (50.78%), Postives = 589/1087 (54.19%), Query Frame = 0


Query: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
            MKALLGSQDVWDIVSNGYEEPESDA  NQ +RE  QNTRK  QKALTIIHQAI+DNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDATFNQAQREALQNTRKNDQKALTIIHQAIDDNNFEK 60

Query: 61   ISGATTAYQAWKILENTYKGVDRVK----------------------------------- 120
            ISGATTAYQAW+ILENTYKGVDRVK                                   
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSYYTSRLLAVVNE 120

Query: 121  -----------------------------------KDLSKMSINRLMGSLQVHEEKLLKK 180
                                               KDLS MSI++LMGSLQ HEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 181  NKQMTEQLFQSKLKLKDKEDNLEKGNRG------RGRGDFK------------------- 240
            NKQMTEQLFQSKLKLKDKE NLEKGNRG      RGRGDFK                   
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDQGRGSYGQRKFDESNSNS 240

Query: 241  ----------------------VEVEEATVKENLI---KVIQTQIHQE------------ 300
                                   E +E +   +L+   K ++T  +              
Sbjct: 241  NSSRGRGRQHYSRNRVEENANYAEKDEESGDSSLLLACKGVETCENNAWYLDSGASNHMC 300

Query: 301  ------VEEDNIIRGQL-----------GKDQIMTGGMTKDRLN---------------- 360
                  VE D  + G +           GK + M  G+   +L                 
Sbjct: 301  GSKLMFVELDESVGGDIVFGDATKIPMKGKRKNMVKGLPYVKLPDQLCEGCLHGKQSRKS 360

Query: 361  ------------------VIIVINSAIVLG------------------------------ 420
                              V  V   + V G                              
Sbjct: 361  FPQESSWRARRPLDRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTS 420

Query: 421  ------------------------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECA 480
                                    N  +E K   I+       KCKKMPKEFWAQAVECA
Sbjct: 421  NEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECA 480

Query: 481  VYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFV 540
            VYLSNR PTRSLWNKTP++AW GRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFV
Sbjct: 481  VYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFV 540

Query: 541  GYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASP 600
            GYDASSK YK YNPVTKKTIVSRDVVFDEEASWNWNDEPEDYK L FP++RDEPSDIASP
Sbjct: 541  GYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDERDEPSDIASP 600

Query: 601  PTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFE 660
            PT PITPQQSTSSSSASSSE P  MRSL+DIYDETEELSQSFNNLTLFCLF D+EPLNFE
Sbjct: 601  PTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFE 660

Query: 661  EASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI----------------------- 687
            EASQNDKW I MDEEIK IKKNDTWELSTLPNGKKA+                       
Sbjct: 661  EASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARL 720

[Close]

BLAST of IVF0001016 vs. ExPASy TrEMBL
Match: A0A5A7T701 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G00570 PE=4 SV=1)

HSP 1 Score: 862.8 bits (2228), Expect = 1.1e-246
Identity = 538/1067 (50.42%), Postives = 579/1067 (54.26%), Query Frame = 0


Query: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
            MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE  QNTRKK QKALTIIHQAI+DNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 61   ISGATTAYQAWKILENTYKGVDRVK----------------------------------- 120
            ISGATTAYQAW+ILENTYKGVDRVK                                   
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 121  -----------------------------------KDLSKMSINRLMGSLQVHEEKLLKK 180
                                               KDLS MSI++LMGSLQ HEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 181  NKQMTEQLFQSKLKLKDKEDNLEKGNRG------RGRGDFK------------------- 240
            NKQMTEQLFQSKLKLKDKE +LEKGNRG      RGRGDFK                   
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 241  NSSRGRGRQHYSRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMC 300

Query: 301  ------VEVEEAT-----------------VKENLIKVI-------------------QT 360
                  +E++E+                   ++N++K +                   + 
Sbjct: 301  RSKSMFIELDESVGGDIVFGDATKIPVKGKARKNMVKRLPYVKLPDQLCEGCLHGKQSRK 360

Query: 361  QIHQE-----------------VEEDNIIRGQLGKDQIMT----------------GGMT 420
               QE                 V+E + + G   + + +                 G  T
Sbjct: 361  SFPQESSWRARRPLDRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFT 420

Query: 421  KDRLNVIIVIN--------SAIVLGNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVEC 480
             +      V N        S     N  +E K   I+       KCKKMPKEFWAQAVEC
Sbjct: 421  SNEFKTFCVENGIRRTMTVSFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVEC 480

Query: 481  AVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVF 540
            AVYLSNR PTRSLWNKTP++AW GRKPSIG+LRVFGCMAYA+IPDQK SKLDDKSEKYVF
Sbjct: 481  AVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKCSKLDDKSEKYVF 540

Query: 541  VGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIAS 600
            VGYDASSK YK YN V+KKTIVSRDVVFDEEASWNWNDEPEDYK L FP++ DEPSDIAS
Sbjct: 541  VGYDASSKGYKLYNHVSKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIAS 600

Query: 601  PPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNF 660
            PPT PITPQQST SSSASSSE P  MRSL+DIYDETEEL Q FNNLTLFCLFGD+EPLNF
Sbjct: 601  PPTSPITPQQSTFSSSASSSEGPRGMRSLQDIYDETEELKQRFNNLTLFCLFGDSEPLNF 660

Query: 661  EEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI---------------------- 670
            EEASQNDKW I MDEEIK IKKNDTWELSTLPNGKKA+                      
Sbjct: 661  EEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKAR 720

[Close]

BLAST of IVF0001016 vs. ExPASy TrEMBL
Match: A0A5D3CJ69 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00150 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 4.5e-245
Identity = 546/1120 (48.75%), Postives = 586/1120 (52.32%), Query Frame = 0


Query: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
            MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE  QNTRKK QKALTIIHQAI+DNNFEK
Sbjct: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 85

Query: 61   ISGATTAYQAWKILENTYKGVDRVK----------------------------------- 120
            IS ATTAYQAW+ILENTYKGVDRVK                                   
Sbjct: 86   ISRATTAYQAWQILENTYKGVDRVKKVRFQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145

Query: 121  -----------------------------------KDLSKMSINRLMGSLQVHEEKLLKK 180
                                               KDLS MSI++LMGSLQ H+E L KK
Sbjct: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHQENLFKK 205

Query: 181  NKQMTEQLFQSKLKLKDKEDNLEKGNRG------RGRGDFK------------------- 240
            NKQMTEQLFQSKLKLKDKED LEKGNRG      RGRGDFK                   
Sbjct: 206  NKQMTEQLFQSKLKLKDKEDGLEKGNRGRGRGGNRGRGDFKDRGRGSYGQRKFDESNSNS 265

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 266  NSSRGRGRQHYSRSSGERSNNGRRNSVEENANYAEKDEESGDSSLFLACKGAETCENSAW 325

Query: 301  -----------------VEVEEAT------------------------------------ 360
                             VE++E+                                     
Sbjct: 326  YLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPVKGKDPNWIWHLRFGHLNFDGLR 385

Query: 361  --VKENLIKVI-------------------QTQIHQE-----------------VEEDNI 420
               ++N++K +                   +    QE                 V+E + 
Sbjct: 386  LLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLDRKTWVYFVKEKSE 445

Query: 421  IRGQLGKDQIMT----------------GGMTKDRLNVIIVINSA--------IVLGNAE 480
            + G   + + +                 G  T +      V N              N  
Sbjct: 446  VFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGV 505

Query: 481  IELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPS 540
            +E K   I+       KCKKMPKEFWAQAVECAVYLSNR PTRSLWNKTP++AW GRKPS
Sbjct: 506  VERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPS 565

Query: 541  IGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF 600
            IG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKTIVSRDVVF
Sbjct: 566  IGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVF 625

Query: 601  DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRS 660
            DEEASWNWNDEPEDYK L FP++ DEPSDIASPPT PITPQQSTSSSSASSSE P  MRS
Sbjct: 626  DEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRS 685

Query: 661  LRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWEL 687
            L+DIYDETEELSQSFNNLTLFCLF D+EPLNFEEASQNDKW I MDEEIK IKKNDTWEL
Sbjct: 686  LQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL 745

[Close]

BLAST of IVF0001016 vs. ExPASy TrEMBL
Match: A0A5A7V8Y7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005190 PE=4 SV=1)

HSP 1 Score: 849.7 bits (2194), Expect = 9.3e-243
Identity = 554/1188 (46.63%), Postives = 599/1188 (50.42%), Query Frame = 0


Query: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
            MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE  QNTRKKYQKALTIIHQAI+DNNFEK
Sbjct: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEK 85

Query: 61   ISGATTAYQAWKILENTYKGVDRVK----------------------------------- 120
            ISGATTAYQAW+ILENTYKGVDRVK                                   
Sbjct: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145

Query: 121  -----------------------------------KDLSKMSINRLMGSLQVHEEKLLKK 180
                                               KDLS MSI++LMGSLQ HEEKLLKK
Sbjct: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205

Query: 181  NKQMTEQLFQSKLKLKDKEDNLEKGNRG------RGRGDFK------------------- 240
            NKQMTE+LFQSKLKLKDKE +LEKGNRG      RGRGDFK                   
Sbjct: 206  NKQMTEKLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNS 265

Query: 241  ----------------------------------------------------------VE 300
                                                                      VE
Sbjct: 266  NSSREIELKKMQIMLRKMKKSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVE 325

Query: 301  VEEA----------------------------------------TVKENLIKV------- 360
            ++E+                                         +K N++ +       
Sbjct: 326  LDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKG 385

Query: 361  ----------------------------------IQTQIHQEVE---------------- 420
                                              IQT + + ++                
Sbjct: 386  YNILMKDYSLLIRDNHDKINAKVQMTKNRMFLLNIQTDVARCLKSCLKDPNWIWHLRFGH 445

Query: 421  ----------EDNIIRG------------------------------------------Q 480
                        N+++G                                           
Sbjct: 446  LNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLDRKTWVY 505

Query: 481  LGKDQIMTGGMTKDRLNVIIVINSAIVL-------------------------------- 540
              K++    GM K R   ++   S   +                                
Sbjct: 506  FVKEKSEVFGMFK-RFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVP 565

Query: 541  ----GNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEE 600
                 N  +E K   I+       KCKKMPKEFWAQAVECAVYLSNR P RSLWNKTP++
Sbjct: 566  FTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPIRSLWNKTPQQ 625

Query: 601  AWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKT 660
            AWIGRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKT
Sbjct: 626  AWIGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT 685

Query: 661  IVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSS 687
            IVSRDVVFDEEASWNWNDEPEDYK LFFP++RDEPSDIASPPT PITPQQSTSSSSASSS
Sbjct: 686  IVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSS 745

[Close]

BLAST of IVF0001016 vs. NCBI nr
Match: KAA0043082.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK30799.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1086 bits (2808), Expect = 0.0
Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 0


Query: 231 MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKR 290
           MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKR
Sbjct: 1   MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKR 60

Query: 291 SKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFF 350
           SKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFF
Sbjct: 61  SKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFF 120

Query: 351 PEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTL 410
           PEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTL
Sbjct: 121 PEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTL 180

Query: 411 FCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDL 470
           FCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDL
Sbjct: 181 FCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDL 240

Query: 471 KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET 530
           KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET
Sbjct: 241 KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET 300

Query: 531 GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRI 590
           GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRI
Sbjct: 301 GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRI 360

Query: 591 LRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQP 650
           LRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQP
Sbjct: 361 LRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQP 420

Query: 651 IVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQ 710
           IVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQ
Sbjct: 421 IVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQ 480

Query: 711 SSASLPEALLRTSEPSHPSKPVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRV 770
           SSASLPEALLRTSEPSHPSKPVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRV
Sbjct: 481 SSASLPEALLRTSEPSHPSKPVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRV 540

[Close]

BLAST of IVF0001016 vs. NCBI nr
Match: KAA0033083.1 (copia protein [Cucumis melo var. makuwa])

HSP 1 Score: 874 bits (2259), Expect = 2.05e-303
Identity = 545/1053 (51.76%), Postives = 579/1053 (54.99%), Query Frame = 0


Query: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
            MKALLGSQDVWDIVSNGYEEPESDA  NQ +RE  QNTRK  QKALTIIHQAI+DNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDATFNQAQREALQNTRKNDQKALTIIHQAIDDNNFEK 60

Query: 61   ISGATTAYQAWKILENTYKGVDRVKK---------------------------------- 120
            ISGATTAYQAW+ILENTYKGVDRVKK                                  
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSYYTSRLLAVVNE 120

Query: 121  ------------------------------------DLSKMSINRLMGSLQVHEEKLLKK 180
                                                DLS MSI++LMGSLQ HEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 181  NKQMTEQLFQSKLKLKDKEDNLEKGNRGRGRG------DFK------------------- 240
            NKQMTEQLFQSKLKLKDKE NLEKGNRGRGRG      DFK                   
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDQGRGSYGQRKFDESNSNS 240

Query: 241  ----------------------VEVEEATVKENLI---KVIQTQIHQE------------ 300
                                   E +E +   +L+   K ++T  +              
Sbjct: 241  NSSRGRGRQHYSRNRVEENANYAEKDEESGDSSLLLACKGVETCENNAWYLDSGASNHMC 300

Query: 301  ------VEEDNIIRGQL-----------GKDQIMTGGMTKDRLN---------------- 360
                  VE D  + G +           GK + M  G+   +L                 
Sbjct: 301  GSKLMFVELDESVGGDIVFGDATKIPMKGKRKNMVKGLPYVKLPDQLCEGCLHGKQSRKS 360

Query: 361  ------------------VIIVINSAIVLG------------------------------ 420
                              V  V   + V G                              
Sbjct: 361  FPQESSWRARRPLDRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTS 420

Query: 421  ------------------------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECA 480
                                    N  +E K   I+       KCKKMPKEFWAQAVECA
Sbjct: 421  NEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECA 480

Query: 481  VYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFV 540
            VYLSNR PTRSLWNKTP++AW GRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFV
Sbjct: 481  VYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFV 540

Query: 541  GYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASP 600
            GYDASSK YK YNPVTKKTIVSRDVVFDEEASWNWNDEPEDYK L FP++RDEPSDIASP
Sbjct: 541  GYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDERDEPSDIASP 600

Query: 601  PTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFE 656
            PT PITPQQSTSSSSASSSE P  MRSL+DIYDETEELSQSFNNLTLFCLF D+EPLNFE
Sbjct: 601  PTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFE 660

[Close]

BLAST of IVF0001016 vs. NCBI nr
Match: KAA0037149.1 (copia protein [Cucumis melo var. makuwa])

HSP 1 Score: 862 bits (2227), Expect = 1.22e-298
Identity = 536/1054 (50.85%), Postives = 576/1054 (54.65%), Query Frame = 0


Query: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
            MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE  QNTRKK QKALTIIHQAI+DNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 61   ISGATTAYQAWKILENTYKGVDRVKK---------------------------------- 120
            ISGATTAYQAW+ILENTYKGVDRVKK                                  
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 121  ------------------------------------DLSKMSINRLMGSLQVHEEKLLKK 180
                                                DLS MSI++LMGSLQ HEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 181  NKQMTEQLFQSKLKLKDKEDNLEKGNRGRGRG------DFK------------------- 240
            NKQMTEQLFQSKLKLKDKE +LEKGNRGRGRG      DFK                   
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 241  NSSRGRGRQHYSRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMC 300

Query: 301  ------VEVEEAT-----------------VKENLIKVI-------------------QT 360
                  +E++E+                   ++N++K +                   + 
Sbjct: 301  RSKSMFIELDESVGGDIVFGDATKIPVKGKARKNMVKRLPYVKLPDQLCEGCLHGKQSRK 360

Query: 361  QIHQE-----------------VEEDNIIRGQLGKDQIMT----------------GGMT 420
               QE                 V+E + + G   + + +                 G  T
Sbjct: 361  SFPQESSWRARRPLDRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFT 420

Query: 421  KDRLNVIIVIN--------SAIVLGNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVEC 480
             +      V N        S     N  +E K   I+       KCKKMPKEFWAQAVEC
Sbjct: 421  SNEFKTFCVENGIRRTMTVSFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVEC 480

Query: 481  AVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVF 540
            AVYLSNR PTRSLWNKTP++AW GRKPSIG+LRVFGCMAYA+IPDQK SKLDDKSEKYVF
Sbjct: 481  AVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKCSKLDDKSEKYVF 540

Query: 541  VGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIAS 600
            VGYDASSK YK YN V+KKTIVSRDVVFDEEASWNWNDEPEDYK L FP++ DEPSDIAS
Sbjct: 541  VGYDASSKGYKLYNHVSKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIAS 600

Query: 601  PPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNF 656
            PPT PITPQQST SSSASSSE P  MRSL+DIYDETEEL Q FNNLTLFCLFGD+EPLNF
Sbjct: 601  PPTSPITPQQSTFSSSASSSEGPRGMRSLQDIYDETEELKQRFNNLTLFCLFGDSEPLNF 660

[Close]

BLAST of IVF0001016 vs. NCBI nr
Match: TYK12007.1 (copia protein [Cucumis melo var. makuwa])

HSP 1 Score: 856 bits (2212), Expect = 8.10e-296
Identity = 542/1104 (49.09%), Postives = 580/1104 (52.54%), Query Frame = 0


Query: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
            MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE  QNTRKK QKALTIIHQAI+DNNFEK
Sbjct: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 85

Query: 61   ISGATTAYQAWKILENTYKGVDRVKK---------------------------------- 120
            IS ATTAYQAW+ILENTYKGVDRVKK                                  
Sbjct: 86   ISRATTAYQAWQILENTYKGVDRVKKVRFQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145

Query: 121  ------------------------------------DLSKMSINRLMGSLQVHEEKLLKK 180
                                                DLS MSI++LMGSLQ H+E L KK
Sbjct: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHQENLFKK 205

Query: 181  NKQMTEQLFQSKLKLKDKEDNLEKGNRGRGRG------DFK------------------- 240
            NKQMTEQLFQSKLKLKDKED LEKGNRGRGRG      DFK                   
Sbjct: 206  NKQMTEQLFQSKLKLKDKEDGLEKGNRGRGRGGNRGRGDFKDRGRGSYGQRKFDESNSNS 265

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 266  NSSRGRGRQHYSRSSGERSNNGRRNSVEENANYAEKDEESGDSSLFLACKGAETCENSAW 325

Query: 301  -----------------VEVEEAT------------------------------------ 360
                             VE++E+                                     
Sbjct: 326  YLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPVKGKDPNWIWHLRFGHLNFDGLR 385

Query: 361  --VKENLIKVI-------------------QTQIHQE-----------------VEEDNI 420
               ++N++K +                   +    QE                 V+E + 
Sbjct: 386  LLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLDRKTWVYFVKEKSE 445

Query: 421  IRGQLGKDQIMT----------------GGMTKDRLNVIIVINSA--------IVLGNAE 480
            + G   + + +                 G  T +      V N              N  
Sbjct: 446  VFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGV 505

Query: 481  IELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPS 540
            +E K   I+       KCKKMPKEFWAQAVECAVYLSNR PTRSLWNKTP++AW GRKPS
Sbjct: 506  VERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPS 565

Query: 541  IGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF 600
            IG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKTIVSRDVVF
Sbjct: 566  IGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVF 625

Query: 601  DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRS 660
            DEEASWNWNDEPEDYK L FP++ DEPSDIASPPT PITPQQSTSSSSASSSE P  MRS
Sbjct: 626  DEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRS 685

Query: 661  LRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWEL 674
            L+DIYDETEELSQSFNNLTLFCLF D+EPLNFEEASQNDKW I MDEEIK IKKNDTWEL
Sbjct: 686  LQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL 745

[Close]

BLAST of IVF0001016 vs. NCBI nr
Match: KAA0062149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 848 bits (2192), Expect = 1.08e-291
Identity = 553/1173 (47.14%), Postives = 596/1173 (50.81%), Query Frame = 0


Query: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
            MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE  QNTRKKYQKALTIIHQAI+DNNFEK
Sbjct: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEK 85

Query: 61   ISGATTAYQAWKILENTYKGVDRVKK---------------------------------- 120
            ISGATTAYQAW+ILENTYKGVDRVKK                                  
Sbjct: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145

Query: 121  ------------------------------------DLSKMSINRLMGSLQVHEEKLLKK 180
                                                DLS MSI++LMGSLQ HEEKLLKK
Sbjct: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205

Query: 181  NKQMTEQLFQSKLKLKDKEDNLEKGNRGRGRG------DFK------------------- 240
            NKQMTE+LFQSKLKLKDKE +LEKGNRGRGRG      DFK                   
Sbjct: 206  NKQMTEKLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNS 265

Query: 241  ----------------------------------------------------------VE 300
                                                                      VE
Sbjct: 266  NSSREIELKKMQIMLRKMKKSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVE 325

Query: 301  VEEAT----------------------------------------VKENLIKV------- 360
            ++E+                                         +K N++ +       
Sbjct: 326  LDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKG 385

Query: 361  ----------------------------------IQTQIHQEVEE--------------- 420
                                              IQT + + ++                
Sbjct: 386  YNILMKDYSLLIRDNHDKINAKVQMTKNRMFLLNIQTDVARCLKSCLKDPNWIWHLRFGH 445

Query: 421  -----------DNIIRG----QLGKDQIMTG----------------------------- 480
                        N+++G    +L  DQ+  G                             
Sbjct: 446  LNFDGLRLLARKNMVKGLPYVKL-PDQLCEGCLHGKQSRKSFPQESSWRARRPLDRKTWV 505

Query: 481  ----------GMTKDRLNVIIVINSAIVLG------------------------------ 540
                      GM K R   ++   S   +                               
Sbjct: 506  YFVKEKSEVFGMFK-RFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTV 565

Query: 541  ------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPE 600
                  N  +E K   I+       KCKKMPKEFWAQAVECAVYLSNR P RSLWNKTP+
Sbjct: 566  PFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPIRSLWNKTPQ 625

Query: 601  EAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKK 660
            +AWIGRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKK
Sbjct: 626  QAWIGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKK 685

Query: 661  TIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASS 674
            TIVSRDVVFDEEASWNWNDEPEDYK LFFP++RDEPSDIASPPT PITPQQSTSSSSASS
Sbjct: 686  TIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASS 745

[Close]

BLAST of IVF0001016 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 2.2e-31
Identity = 68/199 (34.17%), Postives = 120/199 (60.30%), Query Frame = 0


Query: 461 GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMN 520
           G+  ++   L   ++  F M D+G + Y+L I++K    G+F+SQ +Y  +IL    M++
Sbjct: 14  GSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLD 73

Query: 521 SKSVAT--PIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMES 580
            K ++T  P++  + +S  +  D  D   F+S+V +L+YLT T+PDI + V +V   M  
Sbjct: 74  CKPMSTPLPLKLNSSVSTAKYPDPSD---FRSIVGALQYLTLTRPDISYAVNIVCQRMHE 133

Query: 581 PTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVG 640
           PT     + KR+LRY++GT+ + L+   + +  ++ +CDSDWAG T  R+ST+ +  F+G
Sbjct: 134 PTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLG 193

Query: 641 NTAFTWSSKKQPIVTLSTS 658
               +WS+K+QP V+ S++
Sbjct: 194 CNIISWSAKRQPTVSRSST 209

[Close]

BLAST of IVF0001016 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 130.2 bits (326), Expect = 7.2e-30
Identity = 64/189 (33.86%), Postives = 110/189 (58.20%), Query Frame = 0


Query: 469 DLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPI 528
           +LK+ +   F++ D+G + Y+L +E+ +S  GI I Q +Y  ++L++  ++  K  + P+
Sbjct: 299 ELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM 358

Query: 529 ETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAK 588
           +     S H  GD VD   ++ L+  L YL  T+ DI F V  +S F E+P   H +   
Sbjct: 359 DPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVM 418

Query: 589 RILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKK 648
           +IL Y++GT+   LFYSS  E +L+ + D+ +    D R+ST+ Y  F+G +  +W SKK
Sbjct: 419 KILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 478

Query: 649 QPIVTLSTS 658
           Q +V+ S++
Sbjct: 479 QQVVSKSSA 487

HSP 2 Score: 47.4 bits (111), Expect = 6.2e-05
Identity = 27/74 (36.49%), Postives = 38/74 (51.35%), Query Frame = 0


Query: 395 YDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLP 454
           Y++   L  SF    L C+    EP  + EA +   W   MD+EI  ++   TWE+ TLP
Sbjct: 66  YEKVSPLYHSF----LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLP 125

Query: 455 NGKKAIGNCTSMFK 469
             KK IG C  ++K
Sbjct: 126 PNKKPIG-CKWVYK 134

[Close]

BLAST of IVF0001016 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 8.9e-12
Identity = 29/67 (43.28%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 1  MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEK 60
          MKA+LG+ DVW+IV  G+ EPE++ +L+Q +++  +++RK+ +KAL +I+Q ++++ FEK
Sbjct: 25 MKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEK 84

Query: 61 ISGATTA 68
          +  AT+A
Sbjct: 85 VVEATSA 91

[Close]

BLAST of IVF0001016 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.7e-10
Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 557 YLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYC 616
           YLT T+PD+ F V  +S F  +  T  ++   ++L Y++GT+   LFYS++ + +L+ + 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 617 DSDWAGDTDDRKSTSQYVFFV 638
           DSDWA   D R+S + +   V
Sbjct: 62  DSDWASCPDTRRSVTGFCSLV 82

[Close]

BLAST of IVF0001016 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.1e-06
Identity = 26/82 (31.71%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 219 MLRKMKKAKCK-KMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVF 278
           ++ K++   C+  +PK F A A   AV++ N+ P+ ++    P+E W    P+  YLR F
Sbjct: 5   IIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLRRF 64

Query: 279 GCMAYAYIPDQKRSKLDDKSEK 300
           GC+AY +  + K      K E+
Sbjct: 65  GCVAYIHCDEGKLKPRAKKGEE 86

The following BLAST results are available for this feature:

BLAST of IVF0001016 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.3e-43	25.70	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	5.0e-36	39.71	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	6.8e-33	38.28	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	3.2e-30	34.17	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	2.3e-25	33.50	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of IVF0001016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4P4	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SRM0	1.6e-250	50.78	Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G002060...	[more]
A0A5A7T701	1.1e-246	50.42	Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G00570 ...	[more]
A0A5D3CJ69	4.5e-245	48.75	Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00150...	[more]
A0A5A7V8Y7	9.3e-243	46.63	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of IVF0001016 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043082.1	0.0	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0033083.1	2.05e-303	51.76	copia protein [Cucumis melo var. makuwa]	[more]
KAA0037149.1	1.22e-298	50.85	copia protein [Cucumis melo var. makuwa]	[more]
TYK12007.1	8.10e-296	49.09	copia protein [Cucumis melo var. makuwa]	[more]
KAA0062149.1	1.08e-291	47.14	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of IVF0001016 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	2.2e-31	34.17	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	7.2e-30	33.86	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
AT1G48720.1	8.9e-12	43.28	unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B...	[more]
ATMG00240.1	1.7e-10	35.80	Gag-Pol-related retrotransposon family protein	[more]
ATMG00710.1	1.1e-06	31.71	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..131
None	No IPR available	COILS	Coil	Coil	coord: 206..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..385
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 471..641 coord: 204..339
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 613..656 e-value: 1.02047E-21 score: 89.8349
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 206..278 e-value: 2.5E-5 score: 25.6
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 464..528 e-value: 1.9E-12 score: 47.3
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 220..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001016.1	IVF0001016.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding