IVF0004212 (gene) Melon (IVF77) v1

Overview


Name	IVF0004212
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Envelope-like protein
Location	chr10: 7057113 .. 7057469 (-)
RNA-Seq Expression	IVF0004212
Synteny	IVF0004212

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGAGTTAAGATTCCTATACCTTTGTCTCAGTTCTTCTTAAGTTTTTTGGTTCATTTGAATGTTGAGGTTCTGACCCCAAATGGTGCTCCTTGTCCGAACCCAAAAACACTATCTTTAAGCTACAGGCTATTTCAGGGAAGTCATGTTCCTGATATAGAACATGATATGAGACCTTCTAGGAATCCCCATATGTTTGACACAAATGATGTAAATGGGAGTGCTAAAGGGTTCTTTGTTCATCGAACCTTAACCTATAGAATAATAAATACGCTTACAAGTGAGTTGCGAGCTCCTTCTACATCCATAAATTTACTGACTGATAAGAGATTAGAGGTTAATTTGCTTATCTGA

mRNA sequence

ATGTTTGGAGTTAAGATTCCTATACCTTTGTCTCAGTTCTTCTTAAGTTTTTTGGTTCATTTGAATGTTGAGGTTCTGACCCCAAATGGTGCTCCTTGTCCGAACCCAAAAACACTATCTTTAAGCTACAGGCTATTTCAGGGAAGTCATGTTCCTGATATAGAACATGATATGAGACCTTCTAGGAATCCCCATATGTTTGACACAAATGATGTAAATGGGAGTGCTAAAGGGTTCTTTGTTCATCGAACCTTAACCTATAGAATAATAAATACGCTTACAAGTGAGTTGCGAGCTCCTTCTACATCCATAAATTTACTGACTGATAAGAGATTAGAGGTTAATTTGCTTATCTGA

Coding sequence (CDS)

ATGTTTGGAGTTAAGATTCCTATACCTTTGTCTCAGTTCTTCTTAAGTTTTTTGGTTCATTTGAATGTTGAGGTTCTGACCCCAAATGGTGCTCCTTGTCCGAACCCAAAAACACTATCTTTAAGCTACAGGCTATTTCAGGGAAGTCATGTTCCTGATATAGAACATGATATGAGACCTTCTAGGAATCCCCATATGTTTGACACAAATGATGTAAATGGGAGTGCTAAAGGGTTCTTTGTTCATCGAACCTTAACCTATAGAATAATAAATACGCTTACAAGTGAGTTGCGAGCTCCTTCTACATCCATAAATTTACTGACTGATAAGAGATTAGAGGTTAATTTGCTTATCTGA

Protein sequence

MFGVKIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPSRNPHMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI

Homology

[Close]

BLAST of IVF0004212 vs. ExPASy TrEMBL
Match: A0A5A7UCJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001780 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.0e-39
Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 2   FGVKIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPS 61
           FGVKIPIPLS+FF S LVHLNV++LTPN AP P+ KTLSLSYRLFQGSHVP+IEHDMRPS
Sbjct: 193 FGVKIPIPLSRFFSSLLVHLNVDILTPNDAPGPDLKTLSLSYRLFQGSHVPNIEHDMRPS 252

Query: 62  RNPHMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 119
           RNPHMFDT+DV+ + +GFFVH  L  RIIN  T+E +A STSIN+L+++RLEV+ L+
Sbjct: 253 RNPHMFDTDDVDENTEGFFVHHGLASRIINMFTAESQALSTSINMLSNRRLEVDSLV 309

[Close]

BLAST of IVF0004212 vs. ExPASy TrEMBL
Match: A0A5D3D6T2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G001260 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 2   FGVKIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPS 61
           FGVKIPIPLS+FF S LVHLNV++LTPN AP P+ KTLSLSYRLFQGSHVP+IEHDMRPS
Sbjct: 193 FGVKIPIPLSRFFSSLLVHLNVDILTPNDAPGPDLKTLSLSYRLFQGSHVPNIEHDMRPS 252

Query: 62  RNPHMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 119
           RNPHMFDT+DV+ + +GFFVH  L  RIIN L +E +A STSIN+L+++RLEV+ L+
Sbjct: 253 RNPHMFDTDDVDENTEGFFVHHGLASRIINMLMAESQALSTSINMLSNRRLEVDSLV 309

[Close]

BLAST of IVF0004212 vs. ExPASy TrEMBL
Match: A0A5A7U0B3 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00340 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.5e-39
Identity = 85/117 (72.65%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 2   FGVKIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPS 61
           FGVKIPIPL +FF S LV+LN ++LTPN AP P+PKTLSLSY LFQGS+VPDI+HDMRPS
Sbjct: 292 FGVKIPIPLPRFFSSLLVYLNNDILTPNDAPGPDPKTLSLSYMLFQGSYVPDIKHDMRPS 351

Query: 62  RNPHMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 119
           RNP MFD +DV+ + +GFFVHR L  RIINTLT E RA STSINLL D+RLEV+LL+
Sbjct: 352 RNPCMFDIDDVDENVEGFFVHRDLASRIINTLTVECRALSTSINLLLDRRLEVDLLV 408

[Close]

BLAST of IVF0004212 vs. ExPASy TrEMBL
Match: A0A5A7VDH4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1827G00030 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 81/117 (69.23%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 2   FGVKIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPS 61
           FGVKIPIPL  FF S LV+LNV++LT N AP  +PKT SLSYRLFQGSHVPD+EHDMRPS
Sbjct: 111 FGVKIPIPLPHFFPSLLVYLNVDILTANDAPGLDPKTFSLSYRLFQGSHVPDLEHDMRPS 170

Query: 62  RNPHMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 119
           RNP +FD +D+N S +GFFV R L  RIINTL++E RAPSTSINL++++RLEV+ L+
Sbjct: 171 RNPCLFDIDDINDSVEGFFVPRDLASRIINTLSAESRAPSTSINLMSNRRLEVDSLV 227

[Close]

BLAST of IVF0004212 vs. ExPASy TrEMBL
Match: A0A5A7U1S3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002250 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.6e-37
Identity = 81/114 (71.05%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 5   KIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPSRNP 64
           KIPIPLS+FF S LVHLNV++LT N A  P+PKTLSLSYRLFQGS VPDIEHDMRPSRNP
Sbjct: 7   KIPIPLSRFFSSLLVHLNVDILTLNDALGPDPKTLSLSYRLFQGSLVPDIEHDMRPSRNP 66

Query: 65  HMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 119
           HMFDT+DV+ +A+GFFVHR L  ++IN LT++ RA S SINLL+D+RLEV+  +
Sbjct: 67  HMFDTDDVDENAEGFFVHRDLASKVINMLTAKSRAHSASINLLSDRRLEVDSFV 120

[Close]

BLAST of IVF0004212 vs. NCBI nr
Match: KAA0053603.1 (uncharacterized protein E6C27_scaffold190G001780 [Cucumis melo var. makuwa])

HSP 1 Score: 172 bits (436), Expect = 2.44e-50
Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 2   FGVKIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPS 61
           FGVKIPIPLS+FF S LVHLNV++LTPN AP P+ KTLSLSYRLFQGSHVP+IEHDMRPS
Sbjct: 193 FGVKIPIPLSRFFSSLLVHLNVDILTPNDAPGPDLKTLSLSYRLFQGSHVPNIEHDMRPS 252

Query: 62  RNPHMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 118
           RNPHMFDT+DV+ + +GFFVH  L  RIIN  T+E +A STSIN+L+++RLEV+ L+
Sbjct: 253 RNPHMFDTDDVDENTEGFFVHHGLASRIINMFTAESQALSTSINMLSNRRLEVDSLV 309

[Close]

BLAST of IVF0004212 vs. NCBI nr
Match: TYK19190.1 (uncharacterized protein E5676_scaffold522G001260 [Cucumis melo var. makuwa])

HSP 1 Score: 171 bits (434), Expect = 4.87e-50
Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 2   FGVKIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPS 61
           FGVKIPIPLS+FF S LVHLNV++LTPN AP P+ KTLSLSYRLFQGSHVP+IEHDMRPS
Sbjct: 193 FGVKIPIPLSRFFSSLLVHLNVDILTPNDAPGPDLKTLSLSYRLFQGSHVPNIEHDMRPS 252

Query: 62  RNPHMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 118
           RNPHMFDT+DV+ + +GFFVH  L  RIIN L +E +A STSIN+L+++RLEV+ L+
Sbjct: 253 RNPHMFDTDDVDENTEGFFVHHGLASRIINMLMAESQALSTSINMLSNRRLEVDSLV 309

[Close]

BLAST of IVF0004212 vs. NCBI nr
Match: KAA0048187.1 (uncharacterized protein E6C27_scaffold63G00930 [Cucumis melo var. makuwa] >TYK08071.1 uncharacterized protein E5676_scaffold265G002250 [Cucumis melo var. makuwa])

HSP 1 Score: 164 bits (415), Expect = 8.81e-50
Identity = 81/111 (72.97%), Postives = 96/111 (86.49%), Query Frame = 0


Query: 5   KIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPSRNP 64
           KIPIPLS+FF S LVHLNV++LT N A  P+PKTLSLSYRLFQGS VPDIEHDMRPSRNP
Sbjct: 7   KIPIPLSRFFSSLLVHLNVDILTLNDALGPDPKTLSLSYRLFQGSLVPDIEHDMRPSRNP 66

Query: 65  HMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVN 115
           HMFDT+DV+ +A+GFFVHR L  ++IN LT++ RA S SINLL+D+RLEV+
Sbjct: 67  HMFDTDDVDENAEGFFVHRDLASKVINMLTAKSRAHSASINLLSDRRLEVD 117

[Close]

BLAST of IVF0004212 vs. NCBI nr
Match: KAA0063935.1 (uncharacterized protein E6C27_scaffold616G00780 [Cucumis melo var. makuwa] >TYK11298.1 uncharacterized protein E5676_scaffold1827G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 165 bits (418), Expect = 1.28e-48
Identity = 81/117 (69.23%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 2   FGVKIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPS 61
           FGVKIPIPL  FF S LV+LNV++LT N AP  +PKT SLSYRLFQGSHVPD+EHDMRPS
Sbjct: 111 FGVKIPIPLPHFFPSLLVYLNVDILTANDAPGLDPKTFSLSYRLFQGSHVPDLEHDMRPS 170

Query: 62  RNPHMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 118
           RNP +FD +D+N S +GFFV R L  RIINTL++E RAPSTSINL++++RLEV+ L+
Sbjct: 171 RNPCLFDIDDINDSVEGFFVPRDLASRIINTLSAESRAPSTSINLMSNRRLEVDSLV 227

[Close]

BLAST of IVF0004212 vs. NCBI nr
Match: KAA0062797.1 (uncharacterized protein E6C27_scaffold357G00140 [Cucumis melo var. makuwa] >TYJ96756.1 uncharacterized protein E5676_scaffold986G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (410), Expect = 1.62e-48
Identity = 82/114 (71.93%), Postives = 95/114 (83.33%), Query Frame = 0


Query: 5   KIPIPLSQFFLSFLVHLNVEVLTPNGAPCPNPKTLSLSYRLFQGSHVPDIEHDMRPSRNP 64
           +I IPLS+FF S LVHLNV++LT N  P PNPKTLSLSY+LFQGSHVPDIEHDMRPS+NP
Sbjct: 27  EIHIPLSRFFSSLLVHLNVDILTLNDTPGPNPKTLSLSYKLFQGSHVPDIEHDMRPSKNP 86

Query: 65  HMFDTNDVNGSAKGFFVHRTLTYRIINTLTSELRAPSTSINLLTDKRLEVNLLI 118
            MFD +DV+ +A+GFFVH  L  RIINTLT E RA STSINL +D+RLEV+ LI
Sbjct: 87  RMFDIDDVDENAEGFFVHHGLASRIINTLTIESRALSTSINLPSDRRLEVDSLI 140

The following BLAST results are available for this feature:

BLAST of IVF0004212 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0004212 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UCJ0	1.0e-39	71.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D6T2	1.7e-39	71.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U0B3	6.5e-39	72.65	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29...	[more]
A0A5A7VDH4	1.2e-37	69.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U1S3	3.6e-37	71.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0004212 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053603.1	2.44e-50	71.79	uncharacterized protein E6C27_scaffold190G001780 [Cucumis melo var. makuwa]	[more]
TYK19190.1	4.87e-50	71.79	uncharacterized protein E5676_scaffold522G001260 [Cucumis melo var. makuwa]	[more]
KAA0048187.1	8.81e-50	72.97	uncharacterized protein E6C27_scaffold63G00930 [Cucumis melo var. makuwa] >TYK08...	[more]
KAA0063935.1	1.28e-48	69.23	uncharacterized protein E6C27_scaffold616G00780 [Cucumis melo var. makuwa] >TYK1...	[more]
KAA0062797.1	1.62e-48	71.93	uncharacterized protein E6C27_scaffold357G00140 [Cucumis melo var. makuwa] >TYJ9...	[more]

BLAST of IVF0004212 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004212.1	IVF0004212.1	mRNA