IVF0023430 (gene) Melon (IVF77) v1

Overview


Name	IVF0023430
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Thioredoxin-dependent peroxiredoxin
Location	chr03: 17418949 .. 17421390 (+)
RNA-Seq Expression	IVF0023430
Synteny	IVF0023430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGCTCCTATTGTTTGTGAAGATTCTAGAGAGAGTGAGGCCAGCATTGGTTGAATCCAAAGGTAGAGGGGAGGCCAATCTATCTATTACTATCTCCAGCTCCATCTCCATCTTCTTCTCCACTCATGATTTTCCACCTATTTTCACATTTAATTATATAAAAAAGAAGCCAGCGTGTCTACGCATGTACCATATCTACGCAAGATAAGAAAGAAGAGAAAGAGGGATTTTGAGAGCATATTTTTCTCAAAAACCCTCAAAATTTTACTCTCCAAAAATGGCTTCTCTTGTTCATCCAACGCTCTCTCTCACTTTTCTTCTCCCATCTCTGACTCCCAAAACCCCATCTTCTAACAAACTTCCTTTTCTTTCCAGATCCTCTGCTTCCCAGTTTCATGGAGCTCAAATTTCTCATCACATTCTCCCTTTATCTCTTCCTTCTTCTTCTTCTTCCTTGAAATTTACAATCTCCTCTAAGGTACCCCCCATCCCCTTTTATTGGGATTTTTAGTGTTACATTTTGGTTCTTTCTTTCTTTATTTATTTATTGTTACATTTTGGTTTTGGTTGTGTAGGTGAATAAGGGCCAAACCCCTCCTCCATTCACTTTGAAAGATCAGGATGGAAGGAATGTGAGTCTTTCTAAATTTAAAGGGAGACCTGTGGTTGTCTATTTCTATCCTGCTGATGAAACTCCTGGTTGCACCAAACAGGTACTTTTTCATGTTCTAAAATGTTGTTCATGTTTGCTTCCATTGAAATTGATTAATTTGATGCTAGTATATTTCGGGACTCTTTCTTGCTTGAAATAGCAACACTTTGCGAAAATGTTGAGTTTTGTTCTGTCTGGATAACCCAAATTTTTTTGGATTGAATAACTAAAATTATGAAAACTATTTTGCAAACGTTACAATACACCAGCCAATACTAAATGCTCCTTAGATCCATTTGCGGTTGTGGGTTTGCATGAATTGCGGATTGATGAGTCCTCAAACGCAATTTCAAGGCACATTATGATTTTTATAAAAATATAAATTCTTGCTTCTTGTTAAAGTTCTGCTATTTTGTGACTTTTCTTGGATGTGAAATTGCATTATTTGAGGTCCCATCAATTTGTGATGAATGAGACCGGCAATCTTTAAGGATAATTTAACGTTAGCCAATGCCATGTGACACATGCAAAAGGTTAGTTTTCGTTGTTGTTAGAATCCAATTATTTAAGATTAGTGTAATAAAGTTTGGGCCACATGTACAAAAATTGCAAAAAGTCGAATGGTTTCAGTGTTGTCCAACCACATTGCTAGCGTACGGCACATGTGAGTGTTCATTTGGCTGTTTGGGTCAATAAGCTGGGTCTTGGAACATAAAAACACCAAGTGCTTAGGTCAAAAACACCAAGGGCTTGTTAGATTCAGTTTTCAAGTGCTTAGTGACACTTTCTTAACCCCGTATGAAGTCGAATCAAACAGGCTCTAAGTCACTAAGTGTTGTAAACTTCAATATGTTTACAAGTGTTTTTTATATTAATGCTTGTAAAGTTATAAATCACTCCCGAACATAAGTTCAACAAAGTTTTGACCCAACAATTAGGAGACATTATCCCTAGCAGGAAATTGATATTCGTGCAGGCCTGTGCTTTCAGAGATTCTTATGAGAAGTTCAAGAAAGCAGGAGCTGAGGTTGTGGGCATAAGTGGGGATGATTCATCATCACACAAGGTAACTATAGAAGCACTTTTTTCCCAAGCTCTTATCTCTGCCTAAAGCCTGAAACCAAAATTTCTATAGCAGGCTGAATATTTTTATTGAAACTCAACTTCATCTGATGAACTTCTCAAGACTCAAAAACTGGAATTATTAACAAATAGGTTGACATTTTTGGGAATGTAGGCTTTTGCTAAGAAATACCGACTACCATTCACATTGTTAAGTGATGAGGGTAACAAAGTGAGAAAAGAATGGGGAGTTCCTGCTGATCTTTTGGTACATTACCTGGAAGACAAACTTATGTTCTAGATAAGAATGGGGTTGTGCAGCTCATATATAACAACCAATTCCAACCTGAGAAGCATATCGGCGAGACGCTCAAATTACTTCAGAGCCTTTAAATCTCTCTCTTGTATAGCTGTGCATTTCGTTGTAGAATTAGGAAGGTGTTGTTTGTTGGTATCATTTGAGAGGCAATTATCTAGGTCTGAGTAAGAGTGAAAATGATGATTGTTCTTTTATTGTTTTTTTTTTTTGGTTACTACTCACAAGTGAGATCATGTATATTTGAATCATAATGCGTTCAGTGTAGTAATGTCTTTCTACTGTAATATGCTTTAGTTTTTTCACAATGTTCAATATTAAAACTTGTTTGTTGTAACAGAACAAGCTCTCATCAAGTTGTTCTATGTAGTACACAAATCTTTCCATATTGATCTAAATCCATTGAAGTTTT

mRNA sequence

CAAGCTCCTATTGTTTGTGAAGATTCTAGAGAGAGTGAGGCCAGCATTGGTTGAATCCAAAGGTAGAGGGGAGGCCAATCTATCTATTACTATCTCCAGCTCCATCTCCATCTTCTTCTCCACTCATGATTTTCCACCTATTTTCACATTTAATTATATAAAAAAGAAGCCAGCGTGTCTACGCATGTACCATATCTACGCAAGATAAGAAAGAAGAGAAAGAGGGATTTTGAGAGCATATTTTTCTCAAAAACCCTCAAAATTTTACTCTCCAAAAATGGCTTCTCTTGTTCATCCAACGCTCTCTCTCACTTTTCTTCTCCCATCTCTGACTCCCAAAACCCCATCTTCTAACAAACTTCCTTTTCTTTCCAGATCCTCTGCTTCCCAGTTTCATGGAGCTCAAATTTCTCATCACATTCTCCCTTTATCTCTTCCTTCTTCTTCTTCTTCCTTGAAATTTACAATCTCCTCTAAGGTGAATAAGGGCCAAACCCCTCCTCCATTCACTTTGAAAGATCAGGATGGAAGGAATGTGAGTCTTTCTAAATTTAAAGGGAGACCTGTGGTTGTCTATTTCTATCCTGCTGATGAAACTCCTGGTTGCACCAAACAGGCCTGTGCTTTCAGAGATTCTTATGAGAAGTTCAAGAAAGCAGGAGCTGAGGTTGTGGGCATAAGTGGGGATGATTCATCATCACACAAGGCTTTTGCTAAGAAATACCGACTACCATTCACATTGTTAAGTGATGAGGGTAACAAAGTGAGAAAAGAATGGGGAGTTCCTGCTGATCTTTTGGTACATTACCTGGAAGACAAACTTATGTTCTAGATAAGAATGGGGTTGTGCAGCTCATATATAACAACCAATTCCAACCTGAGAAGCATATCGGCGAGACGCTCAAATTACTTCAGAGCCTTTAAATCTCTCTCTTGTATAGCTGTGCATTTCGTTGTAGAATTAGGAAGGTGTTGTTTGTTGGTATCATTTGAGAGGCAATTATCTAGGTCTGAGTAAGAGTGAAAATGATGATTGTTCTTTTATTGTTTTTTTTTTTTGGTTACTACTCACAAGTGAGATCATGTATATTTGAATCATAATGCGTTCAGTGTAGTAATGTCTTTCTACTGTAATATGCTTTAGTTTTTTCACAATGTTCAATATTAAAACTTGTTTGTTGTAACAGAACAAGCTCTCATCAAGTTGTTCTATGTAGTACACAAATCTTTCCATATTGATCTAAATCCATTGAAGTTTT

Coding sequence (CDS)

ATGGCTTCTCTTGTTCATCCAACGCTCTCTCTCACTTTTCTTCTCCCATCTCTGACTCCCAAAACCCCATCTTCTAACAAACTTCCTTTTCTTTCCAGATCCTCTGCTTCCCAGTTTCATGGAGCTCAAATTTCTCATCACATTCTCCCTTTATCTCTTCCTTCTTCTTCTTCTTCCTTGAAATTTACAATCTCCTCTAAGGTGAATAAGGGCCAAACCCCTCCTCCATTCACTTTGAAAGATCAGGATGGAAGGAATGTGAGTCTTTCTAAATTTAAAGGGAGACCTGTGGTTGTCTATTTCTATCCTGCTGATGAAACTCCTGGTTGCACCAAACAGGCCTGTGCTTTCAGAGATTCTTATGAGAAGTTCAAGAAAGCAGGAGCTGAGGTTGTGGGCATAAGTGGGGATGATTCATCATCACACAAGGCTTTTGCTAAGAAATACCGACTACCATTCACATTGTTAAGTGATGAGGGTAACAAAGTGAGAAAAGAATGGGGAGTTCCTGCTGATCTTTTGGTACATTACCTGGAAGACAAACTTATGTTCTAG

Protein sequence

MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSLKFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLLVHYLEDKLMF

Homology

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BLAST of IVF0023430 vs. ExPASy Swiss-Prot
Match: Q6QPJ6 (Peroxiredoxin Q, chloroplastic OS=Populus jackii OX=640484 GN=PRXQ PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.0e-68
Identity = 135/173 (78.03%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MAS+  P  SL  LLP+L P T SS  LP LS+SS SQF+G + SH    LS+P SSSS+
Sbjct: 1   MASISLPKHSLPSLLPTLKPITSSSQNLPILSKSSQSQFYGLKFSHS-TSLSIP-SSSSV 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           K TI +KVNKGQ PP FTLKDQDG+ +SLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KNTIFAKVNKGQAPPSFTLKDQDGKTLSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           YEKFKKAGAEVVGISGDD SSHKAFAKKYRLPFTLLSDEGNK+RKEWGVPADL
Sbjct: 121 YEKFKKAGAEVVGISGDDPSSHKAFAKKYRLPFTLLSDEGNKIRKEWGVPADL 171

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BLAST of IVF0023430 vs. ExPASy Swiss-Prot
Match: Q6UBI3 (Peroxiredoxin Q, chloroplastic OS=Suaeda salsa OX=126914 GN=PRXQ PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-62
Identity = 123/173 (71.10%), Postives = 141/173 (81.50%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MA+L  P  S TF LPS TPK  SS  L  +S+S+ SQF G ++SH    LS P    S 
Sbjct: 1   MATLSLPNHSPTFALPSQTPKPHSSQNLSIISKSAHSQFCGIKLSHS-SSLSPPLYPRSY 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           K +I +KV++G  PP FTLKDQDG+NVSLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KASIVAKVSEGSMPPAFTLKDQDGKNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           YEKFKKAGAEV+GISGDDSSSHKAF +KY+LP+TLLSDEGNKVRK+WGVP+DL
Sbjct: 121 YEKFKKAGAEVIGISGDDSSSHKAFKQKYKLPYTLLSDEGNKVRKDWGVPSDL 172

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BLAST of IVF0023430 vs. ExPASy Swiss-Prot
Match: Q9MB35 (Peroxiredoxin Q, chloroplastic (Fragment) OS=Sedum lineare OX=114260 GN=PRXQ PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.2e-58
Identity = 114/144 (79.17%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 31  LSRSSASQFHGAQISHHILPLSLPSSSSSL-KFTISSKVNKGQTPPPFTLKDQDGRNVSL 90
           L  SS SQFHG + SH     S  S S+ L K +I +KV KG TPPPFTLKDQ+GR VSL
Sbjct: 3   LQTSSQSQFHGLKFSH---ASSFKSPSAPLRKNSIFAKVTKGSTPPPFTLKDQEGRPVSL 62

Query: 91  SKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDDSSSHKAFAKKY 150
           SKFKG+PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGD S SHKAFAKKY
Sbjct: 63  SKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDSSESHKAFAKKY 122

Query: 151 RLPFTLLSDEGNKVRKEWGVPADL 174
           +LPFTLLSDEGNKVRKEWGVP+DL
Sbjct: 123 KLPFTLLSDEGNKVRKEWGVPSDL 143

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BLAST of IVF0023430 vs. ExPASy Swiss-Prot
Match: Q75SY5 (Peroxiredoxin Q, chloroplastic OS=Gentiana triflora OX=55190 GN=AFP1 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.8e-56
Identity = 116/178 (65.17%), Postives = 135/178 (75.84%), Query Frame = 0


Query: 1   MASLVHPTLSLTF--LLPSLTPKTPSSNKLPFLSRSSASQFHGAQI---SHHILPLSLPS 60
           MA++  P    +F  LL + TPK   S  L  +  SS SQ  G +    S   LP   P 
Sbjct: 1   MAAICLPVAKHSFPSLLNTQTPKPLFSQNLHTIPLSSQSQICGLKFLISSPSSLP---PP 60

Query: 61  SSSSLKFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQAC 120
            S S + ++ +KV+KG  PP FTLKDQDG+NVSL++FKG+PVVVYFYPADETPGCTKQAC
Sbjct: 61  PSYSARISVFAKVSKGSVPPQFTLKDQDGKNVSLTEFKGKPVVVYFYPADETPGCTKQAC 120

Query: 121 AFRDSYEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           AFRDSYEKFKKAGAEV+GISGDD SSHKAFAKKYRLP+TLLSDEGNK+R+EWGVPADL
Sbjct: 121 AFRDSYEKFKKAGAEVIGISGDDPSSHKAFAKKYRLPYTLLSDEGNKIRREWGVPADL 175

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BLAST of IVF0023430 vs. ExPASy Swiss-Prot
Match: Q9LU86 (Peroxiredoxin Q, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRXQ PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.8e-55
Identity = 113/168 (67.26%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 6   HPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSLKFTIS 65
           H TL    L  +L  KT  S  +P  ++SS S F G+ ++H       P SSSSLK  I 
Sbjct: 13  HTTLRTLPLRKTLVTKTQFS--VP--TKSSESNFFGSTLTHS--SYISPVSSSSLKGLIF 72

Query: 66  SKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFK 125
           +KVNKGQ  P FTLKDQ+G+ VSL K+KG+PVV+YFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 73  AKVNKGQAAPDFTLKDQNGKPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFK 132

Query: 126 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           KAGAEV+GISGDDS+SHKAFA KY+LP+TLLSDEGNKVRK+WGVP DL
Sbjct: 133 KAGAEVIGISGDDSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDL 174

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BLAST of IVF0023430 vs. ExPASy TrEMBL
Match: A0A5D3BTR7 (Thioredoxin-dependent peroxiredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00690 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL
Sbjct: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL
Sbjct: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173

[Close]

BLAST of IVF0023430 vs. ExPASy TrEMBL
Match: A0A1S3CK00 (Thioredoxin-dependent peroxiredoxin OS=Cucumis melo OX=3656 GN=LOC103501326 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL
Sbjct: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL
Sbjct: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173

[Close]

BLAST of IVF0023430 vs. ExPASy TrEMBL
Match: A0A0A0KBU9 (Thioredoxin-dependent peroxiredoxin OS=Cucumis sativus OX=3659 GN=Csa_6G014770 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85
Identity = 162/173 (93.64%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASL HP LSLT LLPSLTPKTPSSNKLPFLSRSS S FHGAQISHHILP SLPSSSSS 
Sbjct: 1   MASLPHPKLSLTSLLPSLTPKTPSSNKLPFLSRSSTSHFHGAQISHHILPSSLPSSSSSF 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFTIS+KVNKGQ PPPFTLKDQ+GRNVSLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTISAKVNKGQAPPPFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL
Sbjct: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173

[Close]

BLAST of IVF0023430 vs. ExPASy TrEMBL
Match: A0A6J1EY18 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111439264 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.2e-77
Identity = 151/173 (87.28%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASL HPT SL  LLPSL+PKTPSS KLPF SRSS SQF GAQISHHI P S+P SSSS 
Sbjct: 1   MASLAHPTPSLPSLLPSLSPKTPSSIKLPFPSRSSPSQFLGAQISHHISPSSVP-SSSSF 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFT+SSKV+KGQ PP F LKDQDGRNVSLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTVSSKVSKGQAPPAFNLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           YEKFKKAGA+VVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVP+DL
Sbjct: 121 YEKFKKAGAQVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPSDL 172

[Close]

BLAST of IVF0023430 vs. ExPASy TrEMBL
Match: A0A6J1IGC9 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111472652 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.4e-75
Identity = 151/173 (87.28%), Postives = 157/173 (90.75%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASL HPT SL  LL SL+PKTPSS KLPF SRSS SQF GAQISHHI P S+P SSSS 
Sbjct: 1   MASLAHPTPSLPSLL-SLSPKTPSSIKLPFPSRSSPSQFLGAQISHHISPSSVP-SSSSF 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFT+SSKVNKGQ PP F LKDQDGRNVSLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTVSSKVNKGQAPPAFNLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           YEKFKKAGA+VVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVP+DL
Sbjct: 121 YEKFKKAGAQVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPSDL 171

[Close]

BLAST of IVF0023430 vs. NCBI nr
Match: XP_008463093.1 (PREDICTED: peroxiredoxin Q, chloroplastic [Cucumis melo] >KAA0035035.1 peroxiredoxin Q [Cucumis melo var. makuwa] >TYK02368.1 peroxiredoxin Q [Cucumis melo var. makuwa])

HSP 1 Score: 345 bits (886), Expect = 5.10e-119
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL
Sbjct: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173
           YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL
Sbjct: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173

[Close]

BLAST of IVF0023430 vs. NCBI nr
Match: XP_004138385.1 (peroxiredoxin Q, chloroplastic [Cucumis sativus] >KGN45857.1 hypothetical protein Csa_005714 [Cucumis sativus])

HSP 1 Score: 325 bits (832), Expect = 8.63e-111
Identity = 162/173 (93.64%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASL HP LSLT LLPSLTPKTPSSNKLPFLSRSS S FHGAQISHHILP SLPSSSSS 
Sbjct: 1   MASLPHPKLSLTSLLPSLTPKTPSSNKLPFLSRSSTSHFHGAQISHHILPSSLPSSSSSF 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFTIS+KVNKGQ PPPFTLKDQ+GRNVSLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTISAKVNKGQAPPPFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173
           YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL
Sbjct: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173

[Close]

BLAST of IVF0023430 vs. NCBI nr
Match: XP_038884257.1 (peroxiredoxin Q, chloroplastic [Benincasa hispida])

HSP 1 Score: 305 bits (782), Expect = 3.45e-103
Identity = 160/174 (91.95%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSS-NKLPFLSRSSASQFHGAQISHHILPLSLPSSSSS 60
           MASLVHP  SL FLLPS TPKTPSS NKLPFLSRSS SQFHG QIS HI P SLPSS SS
Sbjct: 1   MASLVHPKASLPFLLPSPTPKTPSSSNKLPFLSRSSGSQFHGVQISQHISP-SLPSS-SS 60

Query: 61  LKFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRD 120
            KFTISSKVNKGQTPP FTLKDQDGRNVSLSKFKG+PVVVYFYPADETPGCTKQACAFRD
Sbjct: 61  FKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRD 120

Query: 121 SYEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173
           SYEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL
Sbjct: 121 SYEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 172

[Close]

BLAST of IVF0023430 vs. NCBI nr
Match: XP_022932804.1 (peroxiredoxin Q, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 296 bits (758), Expect = 1.56e-99
Identity = 151/173 (87.28%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASL HPT SL  LLPSL+PKTPSS KLPF SRSS SQF GAQISHHI P S+PSS SS 
Sbjct: 1   MASLAHPTPSLPSLLPSLSPKTPSSIKLPFPSRSSPSQFLGAQISHHISPSSVPSS-SSF 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFT+SSKV+KGQ PP F LKDQDGRNVSLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTVSSKVSKGQAPPAFNLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173
           YEKFKKAGA+VVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVP+DL
Sbjct: 121 YEKFKKAGAQVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPSDL 172

[Close]

BLAST of IVF0023430 vs. NCBI nr
Match: XP_023513647.1 (peroxiredoxin Q, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295 bits (755), Expect = 4.46e-99
Identity = 150/173 (86.71%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60
           MASL HPT SL  LLPSL+PKTPS+ KLPF SRSS SQF GAQISHHI P S+PSS SS 
Sbjct: 1   MASLAHPTPSLPSLLPSLSPKTPSAIKLPFPSRSSPSQFLGAQISHHISPSSVPSS-SSF 60

Query: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120
           KFT+SSKV+KGQ PP F LKDQDGRNVSLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTVSSKVSKGQAPPAFNLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 173
           YEKFKKAGA+VVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVP+DL
Sbjct: 121 YEKFKKAGAQVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPSDL 172

[Close]

BLAST of IVF0023430 vs. TAIR 10
Match: AT3G26060.1 (Thioredoxin superfamily protein )

HSP 1 Score: 214.5 bits (545), Expect = 7.0e-56
Identity = 113/168 (67.26%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 6   HPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSLKFTIS 65
           H TL    L  +L  KT  S  +P  ++SS S F G+ ++H       P SSSSLK  I 
Sbjct: 13  HTTLRTLPLRKTLVTKTQFS--VP--TKSSESNFFGSTLTHS--SYISPVSSSSLKGLIF 72

Query: 66  SKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFK 125
           +KVNKGQ  P FTLKDQ+G+ VSL K+KG+PVV+YFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 73  AKVNKGQAAPDFTLKDQNGKPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFK 132

Query: 126 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           KAGAEV+GISGDDS+SHKAFA KY+LP+TLLSDEGNKVRK+WGVP DL
Sbjct: 133 KAGAEVIGISGDDSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDL 174

[Close]

BLAST of IVF0023430 vs. TAIR 10
Match: AT3G26060.2 (Thioredoxin superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-54
Identity = 113/169 (66.86%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 6   HPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSLKFTIS 65
           H TL    L  +L  KT  S  +P  ++SS S F G+ ++H       P SSSSLK  I 
Sbjct: 13  HTTLRTLPLRKTLVTKTQFS--VP--TKSSESNFFGSTLTHS--SYISPVSSSSLKGLIF 72

Query: 66  SK-VNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKF 125
           +K VNKGQ  P FTLKDQ+G+ VSL K+KG+PVV+YFYPADETPGCTKQACAFRDSYEKF
Sbjct: 73  AKQVNKGQAAPDFTLKDQNGKPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKF 132

Query: 126 KKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADL 174
           KKAGAEV+GISGDDS+SHKAFA KY+LP+TLLSDEGNKVRK+WGVP DL
Sbjct: 133 KKAGAEVIGISGDDSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDL 175

[Close]

BLAST of IVF0023430 vs. TAIR 10
Match: AT5G06290.1 (2-cysteine peroxiredoxin B )

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 55/175 (31.43%), Postives = 84/175 (48.00%), Query Frame = 0


Query: 14  LLPS----LTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSLKFTISSKVN 73
           LLPS    L+P       +P  S SS+S   G      +  L+   S+S   F + ++ +
Sbjct: 21  LLPSKSSLLSPTVSFPRIIPSSSASSSSLCSGFS---SLGSLTTNRSASRRNFAVKAQAD 80

Query: 74  K----GQTPPPFTLK---DQDGRNVSLSKFKGRP-VVVYFYPADETPGCTKQACAFRDSY 133
                G   P F  +   DQ+   V LS++ G+  V+++FYP D T  C  +  AF D Y
Sbjct: 81  DLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 140

Query: 134 EKFKKAGAEVVGISGDDSSSHKAFAKKYR-------LPFTLLSDEGNKVRKEWGV 170
           E+F+K   EV+G+S D   SH A+ +  R       L + L+SD    + K +GV
Sbjct: 141 EEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGV 192

[Close]

BLAST of IVF0023430 vs. TAIR 10
Match: AT3G11630.1 (Thioredoxin superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 51/163 (31.29%), Postives = 78/163 (47.85%), Query Frame = 0


Query: 22  TPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSLKFTISSKVNK----GQTPPPF 81
           +PS + L  LS  SAS    A +       S  SS+S   F + ++ +     G   P F
Sbjct: 27  SPSVSFLRTLSSPSAS----ASLRSGFARRSSLSSTSRRSFAVKAQADDLPLVGNKAPDF 86

Query: 82  TLK---DQDGRNVSLSKFKGRP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVG 141
             +   DQ+   V LS + G+  V+++FYP D T  C  +  AF D + +F+K   EV+G
Sbjct: 87  EAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLG 146

Query: 142 ISGDDSSSHKAFAKKYR-------LPFTLLSDEGNKVRKEWGV 170
           +S D   SH A+ +  R       L + L+SD    + K +GV
Sbjct: 147 VSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGV 185

[Close]

BLAST of IVF0023430 vs. TAIR 10
Match: AT2G25080.1 (glutathione peroxidase 1 )

HSP 1 Score: 45.8 bits (107), Expect = 4.3e-05
Identity = 40/126 (31.75%), Postives = 60/126 (47.62%), Query Frame = 0


Query: 7   PTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSLKFTISS 66
           P  S TFL+PSL   T  SN         A+  +G  +   I P  L     S  FT+ +
Sbjct: 23  PNSSATFLVPSLKFSTGISN--------FANLSNGFSLKSPINPGFL---FKSRPFTVQA 82

Query: 67  KVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKK 126
           +    +T   FT+KD DG++V+L+KFKG+ V++    A      +         YEK+K 
Sbjct: 83  RAAAEKTVHDFTVKDIDGKDVALNKFKGK-VMLIVNVASRCGLTSSNYSELSHLYEKYKT 136

Query: 127 AGAEVV 133
            G E++
Sbjct: 143 QGFEIL 136

The following BLAST results are available for this feature:

BLAST of IVF0023430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6QPJ6	2.0e-68	78.03	Peroxiredoxin Q, chloroplastic OS=Populus jackii OX=640484 GN=PRXQ PE=1 SV=1	[more]
Q6UBI3	1.7e-62	71.10	Peroxiredoxin Q, chloroplastic OS=Suaeda salsa OX=126914 GN=PRXQ PE=2 SV=1	[more]
Q9MB35	7.2e-58	79.17	Peroxiredoxin Q, chloroplastic (Fragment) OS=Sedum lineare OX=114260 GN=PRXQ PE=...	[more]
Q75SY5	6.8e-56	65.17	Peroxiredoxin Q, chloroplastic OS=Gentiana triflora OX=55190 GN=AFP1 PE=2 SV=1	[more]
Q9LU86	9.8e-55	67.26	Peroxiredoxin Q, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRXQ PE=1 SV=1	[more]

BLAST of IVF0023430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTR7	6.1e-92	100.00	Thioredoxin-dependent peroxiredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CK00	6.1e-92	100.00	Thioredoxin-dependent peroxiredoxin OS=Cucumis melo OX=3656 GN=LOC103501326 PE=4...	[more]
A0A0A0KBU9	1.1e-85	93.64	Thioredoxin-dependent peroxiredoxin OS=Cucumis sativus OX=3659 GN=Csa_6G014770 P...	[more]
A0A6J1EY18	4.2e-77	87.28	Thioredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC11143926...	[more]
A0A6J1IGC9	1.4e-75	87.28	Thioredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111472652 ...	[more]

BLAST of IVF0023430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463093.1	5.10e-119	100.00	PREDICTED: peroxiredoxin Q, chloroplastic [Cucumis melo] >KAA0035035.1 peroxired...	[more]
XP_004138385.1	8.63e-111	93.64	peroxiredoxin Q, chloroplastic [Cucumis sativus] >KGN45857.1 hypothetical protei...	[more]
XP_038884257.1	3.45e-103	91.95	peroxiredoxin Q, chloroplastic [Benincasa hispida]	[more]
XP_022932804.1	1.56e-99	87.28	peroxiredoxin Q, chloroplastic-like [Cucurbita moschata]	[more]
XP_023513647.1	4.46e-99	86.71	peroxiredoxin Q, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0023430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26060.1	7.0e-56	67.26	Thioredoxin superfamily protein	[more]
AT3G26060.2	1.7e-54	66.86	Thioredoxin superfamily protein	[more]
AT5G06290.1	1.5e-10	31.43	2-cysteine peroxiredoxin B	[more]
AT3G11630.1	1.3e-09	31.29	Thioredoxin superfamily protein	[more]
AT2G25080.1	4.3e-05	31.75	glutathione peroxidase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 56..180 e-value: 5.8E-39 score: 135.0
None	No IPR available	PANTHER	PTHR42801	THIOREDOXIN-DEPENDENT PEROXIDE REDUCTASE	coord: 58..173
None	No IPR available	PANTHER	PTHR42801:SF4	THIOREDOXIN-DEPENDENT PEROXIDE REDUCTASE, MITOCHONDRIAL	coord: 58..173
None	No IPR available	CDD	cd03017	PRX_BCP	coord: 75..170 e-value: 1.19719E-55 score: 170.421
IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	PFAM	PF00578	AhpC-TSA	coord: 71..172 e-value: 6.5E-35 score: 119.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 68..184 score: 13.772577
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 69..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023430.2	IVF0023430.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0008379	thioredoxin peroxidase activity
molecular_function	GO:0016209	antioxidant activity
molecular_function	GO:0016491	oxidoreductase activity