Tan0012755 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGGGACTTGTTTGATAATTTTTCAAAATACTGGGCCTGGATGCGAAATTATCTGTCCTAATGCCCCCACAGTAGCTGGAAACTCCCGTCGATCTCGACCGCATACAAAACCCTACCAAATTGTATCTTCTCTCTGCCGCCAAAAAACCCTAGGACTACGAGGGAGATCGAAATATGACGACCCGATTCAAGAAGAACCGGAAGAAGAGAGGGCACGTGAGCGCCGGTCATGGTCGTATCGGCAAGCACCGGAAGCACCCTGGTGGTCGGGGAAATGCCGGTGGTATGCATCACCACCGCATCCTCTTCGACAAGTACCATCCTGGATATTTCGGTAAAGTTGGTATGCGCTATTTCCACAAGCTCCGTAACAAGTTCTACTGCCCCATTGTCAACATCGACAAGCTCTGGTCCTTGGTTCCTCAGGACGTCAAGGACAAGGCCTCCAAGGACAACGCCCCCTTGCTCGATGTCACTCAATTTGGGTACTTCAAGGTATTGGGCAAGGGTGTTTTGCCGGAGAACCAGCCTATTGTGGTGAAGGCTAAGCTTGTTTCCAAGATCGCCGAGAAGAAGATCAAGGAGGCCGGTGGCGCGGTTGTACTCACTGCTTAGATTGGGTATTTTTCATTTTCTTTTTGTTCAAACTTGCAGTAGAGGTTAGAGACTGGTGCTGTTGTGTAATTCGGCTCTCGATTTGTTTGAACTTGTTGACAATAGTTCTGATATAATCAAGATTTTGATTCCTGTTTACTCCA TGGGGGACTTGTTTGATAATTTTTCAAAATACTGGGCCTGGATGCGAAATTATCTGTCCTAATGCCCCCACAGTAGCTGGAAACTCCCGTCGATCTCGACCGCATACAAAACCCTACCAAATTGTATCTTCTCTCTGCCGCCAAAAAACCCTAGGACTACGAGGGAGATCGAAATATGACGACCCGATTCAAGAAGAACCGGAAGAAGAGAGGGCACGTGAGCGCCGGTCATGGTCGTATCGGCAAGCACCGGAAGCACCCTGGTGGTCGGGGAAATGCCGGTGGTATGCATCACCACCGCATCCTCTTCGACAAGTACCATCCTGGATATTTCGGTAAAGTTGGTATGCGCTATTTCCACAAGCTCCGTAACAAGTTCTACTGCCCCATTGTCAACATCGACAAGCTCTGGTCCTTGGTTCCTCAGGACGTCAAGGACAAGGCCTCCAAGGACAACGCCCCCTTGCTCGATGTCACTCAATTTGGGTACTTCAAGGTATTGGGCAAGGGTGTTTTGCCGGAGAACCAGCCTATTGTGGTGAAGGCTAAGCTTGTTTCCAAGATCGCCGAGAAGAAGATCAAGGAGGCCGGTGGCGCGGTTGTACTCACTGCTTAGATTGGGTATTTTTCATTTTCTTTTTGTTCAAACTTGCAGTAGAGGTTAGAGACTGGTGCTGTTGTGTAATTCGGCTCTCGATTTGTTTGAACTTGTTGACAATAGTTCTGATATAATCAAGATTTTGATTCCTGTTTACTCCA ATGACGACCCGATTCAAGAAGAACCGGAAGAAGAGAGGGCACGTGAGCGCCGGTCATGGTCGTATCGGCAAGCACCGGAAGCACCCTGGTGGTCGGGGAAATGCCGGTGGTATGCATCACCACCGCATCCTCTTCGACAAGTACCATCCTGGATATTTCGGTAAAGTTGGTATGCGCTATTTCCACAAGCTCCGTAACAAGTTCTACTGCCCCATTGTCAACATCGACAAGCTCTGGTCCTTGGTTCCTCAGGACGTCAAGGACAAGGCCTCCAAGGACAACGCCCCCTTGCTCGATGTCACTCAATTTGGGTACTTCAAGGTATTGGGCAAGGGTGTTTTGCCGGAGAACCAGCCTATTGTGGTGAAGGCTAAGCTTGTTTCCAAGATCGCCGAGAAGAAGATCAAGGAGGCCGGTGGCGCGGTTGTACTCACTGCTTAG MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGAVVLTA Homology
BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: P49637 (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27AC PE=2 SV=2) HSP 1 Score: 273.5 bits (698), Expect = 1.4e-72 Identity = 131/146 (89.73%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: Q9LR33 (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27AB PE=2 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 5.9e-71 Identity = 129/146 (88.36%), Postives = 137/146 (93.84%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: P48160 (60S ribosomal protein L27a OS=Dictyostelium discoideum OX=44689 GN=rpl27a PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 3.4e-50 Identity = 96/149 (64.43%), Postives = 121/149 (81.21%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: Q56K03 (60S ribosomal protein L27a OS=Bos taurus OX=9913 GN=RPL27A PE=2 SV=3) HSP 1 Score: 198.0 bits (502), Expect = 7.5e-50 Identity = 98/149 (65.77%), Postives = 119/149 (79.87%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: P14115 (60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5) HSP 1 Score: 198.0 bits (502), Expect = 7.5e-50 Identity = 98/149 (65.77%), Postives = 119/149 (79.87%), Query Frame = 0
BLAST of Tan0012755 vs. NCBI nr
Match: XP_010102488.1 (60S ribosomal protein L27a-3 [Morus notabilis] >XP_010113107.1 60S ribosomal protein L27a-3 [Morus notabilis] >EXB93552.1 hypothetical protein L484_014543 [Morus notabilis] >EXC65297.1 hypothetical protein L484_000089 [Morus notabilis]) HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75 Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Tan0012755 vs. NCBI nr
Match: XP_042984001.1 (60S ribosomal protein L27a-3-like [Carya illinoinensis] >KAG2701928.1 hypothetical protein I3760_06G067600 [Carya illinoinensis] >KAG6708186.1 hypothetical protein I3842_06G068200 [Carya illinoinensis] >KAG7974739.1 hypothetical protein I3843_06G063100 [Carya illinoinensis]) HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75 Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Tan0012755 vs. NCBI nr
Match: XP_002527925.1 (60S ribosomal protein L27a-3 [Ricinus communis] >EEF34482.1 60S ribosomal protein L27a, putative [Ricinus communis]) HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75 Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Tan0012755 vs. NCBI nr
Match: XP_012079990.1 (60S ribosomal protein L27a-3 [Jatropha curcas] >KDP31039.1 hypothetical protein JCGZ_11415 [Jatropha curcas]) HSP 1 Score: 291.6 bits (745), Expect = 3.8e-75 Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Tan0012755 vs. NCBI nr
Match: PON96718.1 (Ribosomal protein [Trema orientale]) HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75 Identity = 141/146 (96.58%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: W9RTX6 (Ribosomal_L18e/L15P domain-containing protein OS=Morus notabilis OX=981085 GN=L484_000089 PE=3 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 4.9e-76 Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: B9SPK6 (60S ribosomal protein L27a, putative OS=Ricinus communis OX=3988 GN=RCOM_0024830 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75 Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: A0A067KGS0 (Ribosomal_L18e/L15P domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_11415 PE=3 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.8e-75 Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: A0A6J1J3M5 (60S ribosomal protein L27a-3 OS=Cucurbita maxima OX=3661 GN=LOC111483090 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75 Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: A0A6J1GZL8 (60S ribosomal protein L27a-3 OS=Cucurbita moschata OX=3662 GN=LOC111458930 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75 Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Tan0012755 vs. TAIR 10
Match: AT1G70600.1 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 273.5 bits (698), Expect = 1.0e-73 Identity = 131/146 (89.73%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Tan0012755 vs. TAIR 10
Match: AT1G23290.1 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 268.1 bits (684), Expect = 4.2e-72 Identity = 129/146 (88.36%), Postives = 137/146 (93.84%), Query Frame = 0
BLAST of Tan0012755 vs. TAIR 10
Match: AT1G12960.1 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30 Identity = 80/145 (55.17%), Postives = 84/145 (57.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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