IVF0016195 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGTTGTTGTTGTTGTTGTTTCCCTCGTCAGCTCTAAATCATAATCCACACACTCCAAGTATGGATTGGGCTAATCCAACCCGTACCCCGCAGATTCACCGGAATAATGCGGTGATGGGATTGAGAATTAACTCCAGATTATCATCGTGATCCAAACAAAGCCGACCTAGGAATCCCGTTAGGGAACAATCTCTCTCGGTGACTGCGATTCGTTGTCCTTTCTGGGTTTTCGTTCGTCAATTTTTCTGCCTTCTCCGATCAGATTCTCGATTATAGGAGTCATTGGTCAAGCACTTCTGTTTCTGAATTCTCTTATGATCATTGCCTTTGGAATTTTTGAAAAAAAATTTGTTGTCCAATCTTCGGGGATGGACTTGCCGTTCGTCTCCCCATTGTATCTTTCTACTCAAAAGAAAGCCTTCAATGGACATAACCCATTTTGCAGAGTCCTTAGAGAAGATTCTTGTAGAAAAATGTTTCAATGTTTAGCAACCGTTGCCAGCCAAACAACTCAGGTTTCTTTCTTCTTCTTCGTACAATTTTCCAATTTCACTTCAATTTTCACTTCATCTTGCTCATGACATGCCTTTCTACCAGACATATACCTATGGGTTGGAAACCAAGAAGAACGATCTTCTGGTTGCTGTTCAAGAAACTCAAAGGGGGCTTGTAGCATCATCTGATCAACGTTGTGTCATAGAGGAGGCTCTGGTCTGCTTTATTTCTCACTCTCTTTCTATTCTATTCATAAACAATAATTCTTCAGCCTTAGCCAGTACAATTTTTCTTAAGAAGGGGGCTTCAGTCTGATTTCATGTGGTTCTAAGTTATGGTTGTAGGTCAATGTAGAGGCGTATAGCATGGGTCTCCCTATTGACCTGATGAAATTGGATGGCACATGGCGACTACAGTACACTTCGGCTCCTGATGTTCTTATTCTTCTTGAAGCTGCAGCCAGACTTCCTTTCTTTCAGGTTCTAATGTCTACTACTTCTCAATCGCTGGAAATATACATTTTATTTGTTTAAGAATCTATGCCGTTTCTTAAAAAAAAATAAAGAATTGAACTCAAGAAAGAATGAAAGAATATAATTCAAGGACATCCAACTAAAGTAGTCCACGGAAGAAAGGAAGGTGGACTCCAATAAAGCACAATGAAACCTAGTGTATAATTGCAAACAATTTTGTCAATATCCAAAGAGAAACATAGAACATAGCGTGGGATGAAACATCAAGAGGACTCCTCTACGAGCCTCTGAAAATTCTATTGTTTCTTCCCCTCAAAGATCCCATAGCACAAACCTCAGCCTGCCAAATAAGCCTCCATTTATCACAAAAGGGAGGGTTACAAAGGAAATTGTTGATCATCTTCTTGTAATCTCTGTTGTCGAGCAAACTAGACACAAAACACAGCAAAAAGGTCAGTCAAAACCGTCTGAGCAAACTCCCACAAGTTATGATTTCAGTGTTCCTCGACCAACCTTAAGCTTGTTTGGGAGTGATTTTGAAATGATTGAAATCGCTTTTAGTCATTCAATATCGATTTTGATCTTATGAAACTTGACCTTGGAAAATGTTGATTTTAACCATTTGAAAATTATTCCAAAATATATCTTAAATCACTTCTCCTTAGTTTCTTTGTAATAATCATTTAAGTAGTCTGTTAGGAGAGGTTTACTGATATCCAGTTTGCTGACCTACTATCTTGTTTTGCTTTCTTTTACCTGAAAATTAGTGATCCCAAGGCATGAATGTTGATATTCTTTCACGTAACTTTTTCAAGAAAAAAAATGTTGATATTTTTGTTACAGTTTTCATTTTCCATTGTTAAGAGGGAAAATAGCACTGTTATATTTAATATTTTTATTGTGTTTCTGTTTATTTGCTACACCTTACTCGTGGCTGCACCGGTAGATTGGGCAAATCTTTCAGAAATTTGAATGTCGGGACAGTTTGAATGAAGGAATTGTTCGAAATGTCGTTCGCTGGAGTATCCCATCACTGTTAGAGGTATACCATAAACAAAGTATGGCAATCATGAATTGCTGTTATAAGCTGGATTGATCATCTTTAGTTCCGCTCATTTTCATTTGCTCGCAATTCAAGCCCACTATTATCAAACAAATATACTTTTAACTCCTCCTCACCCCAATGAGGAAAAAATGGTAAGAATCTAGTTGGTAGTTGGTGGATGTCTTGGCATTTTATAGAGAAATTCTTTATTTTTGGCTTTTCAGGACCAGGAAGGAGCAACTCTGCTTGTATCTGCAAAATTTTCTGTTGTTTCTTTACGTAACATCTACCTCCAATTTGAGGAGGTGAGTTTCTGCATCAAGTGTTCCTTTGCTTTCCTTTTGGTTTGTTTCACTCTGCGGATATAGATATGTGAGAATTGCTGGCCGTCAGAGAAACATGTATATTTATCTGTGCTCTCTTTCTGTAGTCAATTAGCTAAATAAGTTCTTCGATGTTTTCCTGGAGTTAAAAAGTGTTTTCGTTTGCTCATGTTTCCACTTCAGGTTCCTTCTAGAATCTAGATTCAATAGATGTGGTAAATTGCCCTTAATTTGGTGCTCTGCACAAGAATTGTTCTTTTTATTTATACAATAGTATTGAATCTCTGATCACCAAGTTGTTTTTATGATTACTTGAAATGACATGAGTAGCAAGGAAAATTAAACCCGACTTTTCAACTGGTTATTTAGAACGTGTTAGAAACATTGAAGAGAAGGTAATTAAAGACTTTTTTTTTTTTTTTTTGCATCTTTGACTCTAACATCCTAACCCAGGAATTTTGAATCTCGTAGAGCGATTTATCTGCATCTTTCAATTCTTTTGACACACTTCTAAAAGTATTCTAGTTGTGAAAAAATCTGAGGAATTTTTTAACATCGCCTTACGTAGAGAGATTCATCTGCATCTTTAAATGCTATGGAAACACTTTAAAAGTATTGTAATTGTGAGATATGTGGATGTTGCGAGCTGCTTTTGGCAGATCAGTGTCCAAAACATAAAGATTAGCGAACAGCTGCAGGCTTTAATTGCTCCCGCAATACTCCCACGGTCATTTCTAAGTCTTCAGGTAAACAACTGACAAAAAAAAAAAGTGATGGTTGAAGCTTGATATCGATTTGCCTGAAAATGAAATGATGATTTAAACGGCTTTTAATGCTCAGATCTTGCAATTTCTTCGGAGTTTTCAAGTTGGGGTTCCTGTGAGAAACCAAGGGAGGTAAGTGTATTCAGATGAGAAGGCCATGGATTATGAAAAATAGTCCCTGGAGACTAAAATTTGATGATAATGCTAAGTATGATTGGGTTTGAACTTGCAGCAGACGAGGAGTAGGAGGACTGTATTACCTTTCATATTTGGATGGGAATATGCTATTGGGTCGTTCAGTGGATGGCGGCGGAGTTTTTGTTTTTACCAAAGCTCAGCCTCTCCAATTTTAAACCAAAGAAACATATCCCAATTACTCACGCTCTCACCTTACCAGCTGAGTTCACTTTTTTTTTTTTTTCTTTTCGCATCTGTTTCAACATCTGTATGAAACCGAGAAACATCTAGAATTATGGTAGCATAGATTATACTATACTACCTTCATTTATTGTTAGTCATTTAAACAACTATTAAGAAATGTGTGGAATCTCTATGATAAAGATTTAATAAATTAATAAATTATT TTTTGTTGTTGTTGTTGTTGTTTCCCTCGTCAGCTCTAAATCATAATCCACACACTCCAAGTATGGATTGGGCTAATCCAACCCGTACCCCGCAGATTCACCGGAATAATGCGGTGATGGGATTGAGAATTAACTCCAGATTATCATCGTGATCCAAACAAAGCCGACCTAGGAATCCCGTTAGGGAACAATCTCTCTCGGTGACTGCGATTCGTTGTCCTTTCTGGGTTTTCGTTCGTCAATTTTTCTGCCTTCTCCGATCAGATTCTCGATTATAGGAGTCATTGGTCAAGCACTTCTGTTTCTGAATTCTCTTATGATCATTGCCTTTGGAATTTTTGAAAAAAAATTTGTTGTCCAATCTTCGGGGATGGACTTGCCGTTCGTCTCCCCATTGTATCTTTCTACTCAAAAGAAAGCCTTCAATGGACATAACCCATTTTGCAGAGTCCTTAGAGAAGATTCTTGTAGAAAAATGTTTCAATGTTTAGCAACCGTTGCCAGCCAAACAACTCAGACATATACCTATGGGTTGGAAACCAAGAAGAACGATCTTCTGGTTGCTGTTCAAGAAACTCAAAGGGGGCTTGTAGCATCATCTGATCAACGTTGTGTCATAGAGGAGGCTCTGGTCAATGTAGAGGCGTATAGCATGGGTCTCCCTATTGACCTGATGAAATTGGATGGCACATGGCGACTACAGTACACTTCGGCTCCTGATGTTCTTATTCTTCTTGAAGCTGCAGCCAGACTTCCTTTCTTTCAGATTGGGCAAATCTTTCAGAAATTTGAATGTCGGGACAGTTTGAATGAAGGAATTGTTCGAAATGTCGTTCGCTGGAGTATCCCATCACTGTTAGAGGACCAGGAAGGAGCAACTCTGCTTGTATCTGCAAAATTTTCTGTTGTTTCTTTACGTAACATCTACCTCCAATTTGAGGAGATCAGTGTCCAAAACATAAAGATTAGCGAACAGCTGCAGGCTTTAATTGCTCCCGCAATACTCCCACGGTCATTTCTAAGTCTTCAGATCTTGCAATTTCTTCGGAGTTTTCAAGTTGGGGTTCCTGTGAGAAACCAAGGGAGCAGACGAGGAGTAGGAGGACTGTATTACCTTTCATATTTGGATGGGAATATGCTATTGGGTCGTTCAGTGGATGGCGGCGGAGTTTTTGTTTTTACCAAAGCTCAGCCTCTCCAATTTTAAACCAAAGAAACATATCCCAATTACTCACGCTCTCACCTTACCAGCTGAGTTCACTTTTTTTTTTTTTTCTTTTCGCATCTGTTTCAACATCTGTATGAAACCGAGAAACATCTAGAATTATGGTAGCATAGATTATACTATACTACCTTCATTTATTGTTAGTCATTTAAACAACTATTAAGAAATGTGTGGAATCTCTATGATAAAGATTTAATAAATTAATAAATTATT ATGATCATTGCCTTTGGAATTTTTGAAAAAAAATTTGTTGTCCAATCTTCGGGGATGGACTTGCCGTTCGTCTCCCCATTGTATCTTTCTACTCAAAAGAAAGCCTTCAATGGACATAACCCATTTTGCAGAGTCCTTAGAGAAGATTCTTGTAGAAAAATGTTTCAATGTTTAGCAACCGTTGCCAGCCAAACAACTCAGACATATACCTATGGGTTGGAAACCAAGAAGAACGATCTTCTGGTTGCTGTTCAAGAAACTCAAAGGGGGCTTGTAGCATCATCTGATCAACGTTGTGTCATAGAGGAGGCTCTGGTCAATGTAGAGGCGTATAGCATGGGTCTCCCTATTGACCTGATGAAATTGGATGGCACATGGCGACTACAGTACACTTCGGCTCCTGATGTTCTTATTCTTCTTGAAGCTGCAGCCAGACTTCCTTTCTTTCAGATTGGGCAAATCTTTCAGAAATTTGAATGTCGGGACAGTTTGAATGAAGGAATTGTTCGAAATGTCGTTCGCTGGAGTATCCCATCACTGTTAGAGGACCAGGAAGGAGCAACTCTGCTTGTATCTGCAAAATTTTCTGTTGTTTCTTTACGTAACATCTACCTCCAATTTGAGGAGATCAGTGTCCAAAACATAAAGATTAGCGAACAGCTGCAGGCTTTAATTGCTCCCGCAATACTCCCACGGTCATTTCTAAGTCTTCAGATCTTGCAATTTCTTCGGAGTTTTCAAGTTGGGGTTCCTGTGAGAAACCAAGGGAGCAGACGAGGAGTAGGAGGACTGTATTACCTTTCATATTTGGATGGGAATATGCTATTGGGTCGTTCAGTGGATGGCGGCGGAGTTTTTGTTTTTACCAAAGCTCAGCCTCTCCAATTTTAA MIIAFGIFEKKFVVQSSGMDLPFVSPLYLSTQKKAFNGHNPFCRVLREDSCRKMFQCLATVASQTTQTYTYGLETKKNDLLVAVQETQRGLVASSDQRCVIEEALVNVEAYSMGLPIDLMKLDGTWRLQYTSAPDVLILLEAAARLPFFQIGQIFQKFECRDSLNEGIVRNVVRWSIPSLLEDQEGATLLVSAKFSVVSLRNIYLQFEEISVQNIKISEQLQALIAPAILPRSFLSLQILQFLRSFQVGVPVRNQGSRRGVGGLYYLSYLDGNMLLGRSVDGGGVFVFTKAQPLQF Homology
BLAST of IVF0016195 vs. ExPASy Swiss-Prot
Match: Q8W4F1 (Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP10 PE=1 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 2.7e-91 Identity = 175/250 (70.00%), Postives = 203/250 (81.20%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy Swiss-Prot
Match: B2LU34 (Chromoplast-specific carotenoid-associated protein C1, chromoplastic OS=Oncidium hybrid cultivar OX=141207 GN=CHRC1 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.3e-05 Identity = 57/228 (25.00%), Postives = 99/228 (43.42%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy Swiss-Prot
Match: B4F6G1 (Chromoplast-specific carotenoid-associated protein C2, chromoplastic OS=Oncidium hybrid cultivar OX=141207 GN=CHRC2 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.8e-05 Identity = 58/225 (25.78%), Postives = 100/225 (44.44%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy Swiss-Prot
Match: O81439 (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP1 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04 Identity = 59/230 (25.65%), Postives = 100/230 (43.48%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy Swiss-Prot
Match: Q94FZ9 (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris OX=3711 GN=PAP1 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 5.7e-04 Identity = 63/230 (27.39%), Postives = 103/230 (44.78%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy TrEMBL
Match: A0A5D3DBT1 (Putative plastid-lipid-associated protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00770 PE=3 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 6.5e-152 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy TrEMBL
Match: A0A1S3CN36 (probable plastid-lipid-associated protein 10, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502792 PE=3 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 6.5e-152 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy TrEMBL
Match: A0A1S3CNH6 (probable plastid-lipid-associated protein 10, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502792 PE=3 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 4.6e-150 Identity = 277/278 (99.64%), Postives = 277/278 (99.64%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy TrEMBL
Match: A0A0A0L8Y5 (PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G640570 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.5e-144 Identity = 264/277 (95.31%), Postives = 269/277 (97.11%), Query Frame = 0
BLAST of IVF0016195 vs. ExPASy TrEMBL
Match: A0A6J1GYC1 (probable plastid-lipid-associated protein 10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457959 PE=3 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.7e-131 Identity = 242/277 (87.36%), Postives = 256/277 (92.42%), Query Frame = 0
BLAST of IVF0016195 vs. NCBI nr
Match: XP_008465100.1 (PREDICTED: probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Cucumis melo] >KAA0068185.1 putative plastid-lipid-associated protein 10 [Cucumis melo var. makuwa] >TYK21107.1 putative plastid-lipid-associated protein 10 [Cucumis melo var. makuwa]) HSP 1 Score: 541 bits (1395), Expect = 1.21e-193 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of IVF0016195 vs. NCBI nr
Match: XP_008465101.1 (PREDICTED: probable plastid-lipid-associated protein 10, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 535 bits (1378), Expect = 4.54e-191 Identity = 277/278 (99.64%), Postives = 277/278 (99.64%), Query Frame = 0
BLAST of IVF0016195 vs. NCBI nr
Match: XP_004144415.1 (probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Cucumis sativus] >XP_011651693.1 probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Cucumis sativus] >XP_011651694.1 probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Cucumis sativus] >KGN58415.1 hypothetical protein Csa_001902 [Cucumis sativus]) HSP 1 Score: 514 bits (1325), Expect = 5.63e-183 Identity = 264/277 (95.31%), Postives = 269/277 (97.11%), Query Frame = 0
BLAST of IVF0016195 vs. NCBI nr
Match: XP_011651695.1 (probable plastid-lipid-associated protein 10, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 510 bits (1314), Expect = 2.57e-181 Identity = 264/277 (95.31%), Postives = 269/277 (97.11%), Query Frame = 0
BLAST of IVF0016195 vs. NCBI nr
Match: XP_038897398.1 (probable plastid-lipid-associated protein 10, chloroplastic [Benincasa hispida] >XP_038897407.1 probable plastid-lipid-associated protein 10, chloroplastic [Benincasa hispida]) HSP 1 Score: 490 bits (1261), Expect = 3.18e-173 Identity = 251/277 (90.61%), Postives = 264/277 (95.31%), Query Frame = 0
BLAST of IVF0016195 vs. TAIR 10
Match: AT2G46910.1 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 336.7 bits (862), Expect = 2.0e-92 Identity = 175/250 (70.00%), Postives = 203/250 (81.20%), Query Frame = 0
BLAST of IVF0016195 vs. TAIR 10
Match: AT3G23400.1 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 50.1 bits (118), Expect = 3.6e-06 Identity = 67/226 (29.65%), Postives = 93/226 (41.15%), Query Frame = 0
BLAST of IVF0016195 vs. TAIR 10
Match: AT4G04020.1 (fibrillin ) HSP 1 Score: 48.9 bits (115), Expect = 8.1e-06 Identity = 59/230 (25.65%), Postives = 100/230 (43.48%), Query Frame = 0
BLAST of IVF0016195 vs. TAIR 10
Match: AT4G22240.1 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 46.2 bits (108), Expect = 5.3e-05 Identity = 55/230 (23.91%), Postives = 101/230 (43.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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