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IVF0020487.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCTTCTTTTTAGATAAACCCTCTCCCTCCCCCCCCTTCCTTTTTGGCTTCCATTCCATCTGTGAATGACAAGTAAAAGATCTTCCCCTCCTTCCAAGATTTTTATTCCTTCTCAATAAAAGCTGATCTCGATCCATCCATCCTCTTACTTATTTTGTTTTTGAAATTTTAATCAATTCCTTTTTTCCTTCCTTTGCTTATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCATCATCATCATCATCAACAACAACAACAACAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCAATTCCTCATCATCAACAATCTCTTCCTAATTTTCATAATTACCAAAATAATAATAATCATCATCATCACCTCCTCCCTTCTTTCTATGATTTTCCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAGAAACCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGAATCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCTAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTTACTGGAATCCCTTCCCCGCCCTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGCAATAACTCAACGGCTACGCGGCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGATGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTTAGAGATGGATCACAATGTTGTTCATGGGAGTAATAGGCTGGTACAAAATGATGAAACCTGGAGAAGCAACCGCGGCGGTAGTACCACTGCAGCAACAGCAACAGCAACCGCAGCAACAGCAGCGACAGTGACAGCAAATTCCAACAATAACAATAATAATAATAATGCAGCAAATTGTAAGTTTTAAATTTTATGGGGTCGTTGTTCACTTTGTTCTTTCATCGAATAATTTGGGGAATATTGTTTCAACTACCAAGAGGGGTAAAAGTACAGTAGTAGATTAAAGAGAGAGAAAAAAAAAAAGGGAAATGGGTAAAATTTTTCTTTTAGGTAATCAAAATGGCAATGATGATGATACTGATGATTTTAATGATGATTGTGGAGATTGTAGTGGTGGTGGTAGTGGTGGTGGTGAGTTGATGATGGAAAATAAGAACCCTCAAGCTAAGCAACAACCCCTCTTCCCCCATAGACCCATCATCATAAAACCCTTTTGGCAGTTTATATACAAAGGAATATTATCATTATTTTTTGAGTTCAAAATATCAATTTATAGCACAAGTCTATTCATTTCAACCCCAACTTTCATAAATATATCAATCTAAATCTTCAAATTTCGTTAAACATAGTATACAAAATGTTTAAGTTGATACAAACAATTAAAGTTAAAAGATGATGTTAAAGATTTCAGGTTAATTAATGGCTTTGTTTAGAGCATAAAATGACGAAAATTTAGGGTTTATAACGGTGGGTGTGTACTGTTTGGATTTTAGTGGATTCAGTTTACAATATAATGGCGTAAAGACGAAGGTGGAAGACATTTTCCAACGCCGTAGCAGCAGCTGTGTTTTGGCAATTGCCGCAGTCTATGGCGGTTCGAAATTTTCCGGTCAGAAATGGGGCCCTCTCTCTCTCTACTACCGGTG ATTCTCTTCTTTTTAGATAAACCCTCTCCCTCCCCCCCCTTCCTTTTTGGCTTCCATTCCATCTGTGAATGACAAGTAAAAGATCTTCCCCTCCTTCCAAGATTTTTATTCCTTCTCAATAAAAGCTGATCTCGATCCATCCATCCTCTTACTTATTTTGTTTTTGAAATTTTAATCAATTCCTTTTTTCCTTCCTTTGCTTATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCATCATCATCATCATCAACAACAACAACAACAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCAATTCCTCATCATCAACAATCTCTTCCTAATTTTCATAATTACCAAAATAATAATAATCATCATCATCACCTCCTCCCTTCTTTCTATGATTTTCCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAGAAACCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGAATCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCTAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTTACTGGAATCCCTTCCCCGCCCTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGCAATAACTCAACGGCTACGCGGCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGATGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTTAGAGATGGATCACAATGTTGTTCATGGGAGTAATAGGCTGGTACAAAATGATGAAACCTGGAGAAGCAACCGCGGCGGTAGTACCACTGCAGCAACAGCAACAGCAACCGCAGCAACAGCAGCGACAGTGACAGCAAATTCCAACAATAACAATAATAATAATAATGCAGCAAATTTGGATTCAGTTTACAATATAATGGCGTAAAGACGAAGGTGGAAGACATTTTCCAACGCCGTAGCAGCAGCTGTGTTTTGGCAATTGCCGCAGTCTATGGCGGTTCGAAATTTTCCGGTCAGAAATGGGGCCCTCTCTCTCTCTACTACCGGTG ATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCATCATCATCATCATCAACAACAACAACAACAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCAATTCCTCATCATCAACAATCTCTTCCTAATTTTCATAATTACCAAAATAATAATAATCATCATCATCACCTCCTCCCTTCTTTCTATGATTTTCCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAGAAACCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGAATCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCTAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTTACTGGAATCCCTTCCCCGCCCTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGCAATAACTCAACGGCTACGCGGCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGATGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTTAGAGATGGATCACAATGTTGTTCATGGGAGTAATAGGCTGGTACAAAATGATGAAACCTGGAGAAGCAACCGCGGCGGTAGTACCACTGCAGCAACAGCAACAGCAACCGCAGCAACAGCAGCGACAGTGACAGCAAATTCCAACAATAACAATAATAATAATAATGCAGCAAATTTGGATTCAGTTTACAATATAATGGCGTAA MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCSSSSLLACSSSSIPHHQQSLPNFHNYQNNNNHHHHLLPSFYDFPSSNYNFNPDSSSNSFVNLDVLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVRENLEMDHNVVHGSNRLVQNDETWRSNRGGSTTAATATATAATAATVTANSNNNNNNNNAANLDSVYNIMA Homology
BLAST of IVF0020487.1 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.7e-04 Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of IVF0020487.1 vs. ExPASy TrEMBL
Match: A0A1S4E5L0 (anaphase-promoting complex subunit cdh1-like OS=Cucumis melo OX=3656 GN=LOC103503584 PE=4 SV=1) HSP 1 Score: 643.3 bits (1658), Expect = 5.9e-181 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of IVF0020487.1 vs. ExPASy TrEMBL
Match: A0A5D3E5M3 (Anaphase-promoting complex subunit cdh1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004870 PE=4 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 3.0e-153 Identity = 292/310 (94.19%), Postives = 297/310 (95.81%), Query Frame = 0
BLAST of IVF0020487.1 vs. ExPASy TrEMBL
Match: A0A0A0LJY7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G895870 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 8.4e-111 Identity = 232/255 (90.98%), Postives = 234/255 (91.76%), Query Frame = 0
BLAST of IVF0020487.1 vs. ExPASy TrEMBL
Match: A0A6J1FJ60 (mucin-5AC-like OS=Cucurbita moschata OX=3662 GN=LOC111445950 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 4.1e-49 Identity = 175/384 (45.57%), Postives = 209/384 (54.43%), Query Frame = 0
BLAST of IVF0020487.1 vs. ExPASy TrEMBL
Match: A0A6J1IVA8 (mucin-5AC-like OS=Cucurbita maxima OX=3661 GN=LOC111480291 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48 Identity = 182/397 (45.84%), Postives = 218/397 (54.91%), Query Frame = 0
BLAST of IVF0020487.1 vs. NCBI nr
Match: XP_016903526.1 (PREDICTED: anaphase-promoting complex subunit cdh1-like [Cucumis melo]) HSP 1 Score: 644 bits (1660), Expect = 3.94e-232 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of IVF0020487.1 vs. NCBI nr
Match: XP_011652626.1 (uncharacterized protein DDB_G0271670 [Cucumis sativus] >KAE8651421.1 hypothetical protein Csa_001203 [Cucumis sativus]) HSP 1 Score: 558 bits (1439), Expect = 1.32e-198 Identity = 321/350 (91.71%), Postives = 324/350 (92.57%), Query Frame = 0
BLAST of IVF0020487.1 vs. NCBI nr
Match: KAA0038603.1 (anaphase-promoting complex subunit cdh1-like [Cucumis melo var. makuwa] >TYK31202.1 anaphase-promoting complex subunit cdh1-like [Cucumis melo var. makuwa]) HSP 1 Score: 554 bits (1428), Expect = 5.20e-197 Identity = 290/292 (99.32%), Postives = 291/292 (99.66%), Query Frame = 0
BLAST of IVF0020487.1 vs. NCBI nr
Match: XP_038898813.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida]) HSP 1 Score: 362 bits (930), Expect = 4.27e-121 Identity = 257/372 (69.09%), Postives = 273/372 (73.39%), Query Frame = 0
BLAST of IVF0020487.1 vs. NCBI nr
Match: XP_023524775.1 (probable serine/threonine-protein kinase MARK-A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217 bits (552), Expect = 7.24e-64 Identity = 181/368 (49.18%), Postives = 210/368 (57.07%), Query Frame = 0
BLAST of IVF0020487.1 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein ) HSP 1 Score: 72.4 bits (176), Expect = 8.0e-13 Identity = 69/170 (40.59%), Postives = 87/170 (51.18%), Query Frame = 0
BLAST of IVF0020487.1 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein ) HSP 1 Score: 68.9 bits (167), Expect = 8.8e-12 Identity = 69/172 (40.12%), Postives = 87/172 (50.58%), Query Frame = 0
BLAST of IVF0020487.1 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein ) HSP 1 Score: 63.9 bits (154), Expect = 2.8e-10 Identity = 57/160 (35.62%), Postives = 86/160 (53.75%), Query Frame = 0
BLAST of IVF0020487.1 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.9e-06 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of IVF0020487.1 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein ) HSP 1 Score: 48.5 bits (114), Expect = 1.2e-05 Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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