IVF0022251 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAAATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATCCCTCTGGTTAAAGTCTTGTGGCGGAATCACCGGGTAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGGATAA ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAAATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATCCCTCTGGTTAAAGTCTTGTGGCGGAATCACCGGGTAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGGATAA ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAAATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATCCCTCTGGTTAAAGTCTTGTGGCGGAATCACCGGGTAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGGATAA MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG Homology
BLAST of IVF0022251 vs. ExPASy TrEMBL
Match: A0A5A7T8G8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00730 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.4e-37 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of IVF0022251 vs. ExPASy TrEMBL
Match: A0A5A7SSB3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold28300G00010 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 7.0e-37 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of IVF0022251 vs. ExPASy TrEMBL
Match: A0A5A7UZZ4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 7.0e-37 Identity = 76/79 (96.20%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of IVF0022251 vs. ExPASy TrEMBL
Match: A0A5A7UDB1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00190 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 9.1e-37 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of IVF0022251 vs. ExPASy TrEMBL
Match: A0A5A7TGX4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00100 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 9.1e-37 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of IVF0022251 vs. NCBI nr
Match: KAA0043066.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 159 bits (402), Expect = 4.72e-49 Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of IVF0022251 vs. NCBI nr
Match: KAA0054732.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 161 bits (407), Expect = 1.07e-48 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of IVF0022251 vs. NCBI nr
Match: KAA0053367.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 161 bits (407), Expect = 1.07e-48 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of IVF0022251 vs. NCBI nr
Match: KAA0059750.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 160 bits (404), Expect = 1.09e-48 Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of IVF0022251 vs. NCBI nr
Match: KAA0053161.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 161 bits (407), Expect = 1.24e-48 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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