IVF0010521 (gene) Melon (IVF77) v1

Overview


Name	IVF0010521
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Defensin-like (DEFL) family protein
Location	chr02: 11081987 .. 11082591 (-)
RNA-Seq Expression	IVF0010521
Synteny	IVF0010521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAAGTTGGATTTATTTCTTGCATTCTAATTATCTTTCTCGTCTTGTATTCAGGTCATATCTCTGACTTTTTTTCTTTTTTTCTAAACTGACTTTTGTGTGAAAATGATATAGTTGGATGAAAACCTAATTAAGTGCTTTCTTGGAAAGTAGATACTTTTAATTTATTTTATGTTTACAACTGCTTTAAACAACAAATTTAATTTATTCACTCAAACTGAATTTAATGTTTAATTTTAGACTTTCAAACACACTTTTACGATATTAAAAAGGAAATCGTGAATTTTGAAACGACAAAAGGATTATTTGTTATATTTAAAACAAGATCTCATTTTTGTAATAATTTCTAAAATAAAGTGACTATATTAATATTCATCTTATTAGCAGCACTTAATTAATTGATGGAATTGTAGGAAGTTCGATAACAAGAGCTCAGCTGTGTTGCAATGAACATCCTGAACTGGGGAGTTGCATACCTGGAATAGACGACAGACATGATAATAGTGGTGACGATGGAAAGTGTTGGAGTTTATGCTCTTCTGGCTGTGTAAAAGGAGGATTCTGCAAGCCAAATAACCATATATGCCATTGTTATTGTTGA

mRNA sequence

ATGGCTAAAGTTGGATTTATTTCTTGCATTCTAATTATCTTTCTCGTCTTAGCTCAGCTGTGTTGCAATGAACATCCTGAACTGGGGAGTTGCATACCTGGAATAGACGACAGACATGATAATAGTGGTGACGATGGAAAGTGTTGGAGTTTATGCTCTTCTGGCTGTGTAAAAGGAGGATTCTGCAAGCCAAATAACCATATATGCCATTGTTATTGTTGA

Coding sequence (CDS)

ATGGCTAAAGTTGGATTTATTTCTTGCATTCTAATTATCTTTCTCGTCTTAGCTCAGCTGTGTTGCAATGAACATCCTGAACTGGGGAGTTGCATACCTGGAATAGACGACAGACATGATAATAGTGGTGACGATGGAAAGTGTTGGAGTTTATGCTCTTCTGGCTGTGTAAAAGGAGGATTCTGCAAGCCAAATAACCATATATGCCATTGTTATTGTTGA

Protein sequence

MAKVGFISCILIIFLVLAQLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCKPNNHICHCYC

Homology

[Close]

BLAST of IVF0010521 vs. ExPASy Swiss-Prot
Match: Q2V2S1 (Putative defensin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=At5g52605 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-13
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 20 LCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCK--PNNHICHCYC 74
          +CC EHP +G C+PGID   D++  DGKCW  C  GC  GGFCK   + HICHC C
Sbjct: 36 ICCKEHPSVGRCLPGID---DDAEKDGKCWKFCIEGCETGGFCKLFEHKHICHCNC 88

[Close]

BLAST of IVF0010521 vs. ExPASy Swiss-Prot
Match: P0CAX9 (Defensin-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=At4g14276 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-12
Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 20 LCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCK--PNNHICHCYC 74
          +CC EHP +G C+P IDD  +     GKCW  C  GC  GGFCK   + HICHC C
Sbjct: 40 ICCKEHPSVGRCLPNIDDSAEKG---GKCWKFCIEGCETGGFCKLFGHKHICHCNC 92

[Close]

BLAST of IVF0010521 vs. ExPASy TrEMBL
Match: A0A0A0LZ58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573070 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-17
Identity = 46/85 (54.12%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 1  MAKVGFISCILIIFLVL--------AQLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLC 60
          MAKVG ISC+L++FLV         A +CCN +P LGSC PG+D   D+   +GKCW LC
Sbjct: 1  MAKVGLISCVLVVFLVFYSGNLNANAAVCCNNNPSLGSCKPGVD---DSPQANGKCWRLC 60

Query: 61 SSGCVKGGFCK----PNNHICHCYC 74
          +SGC KGGFCK       H+CHCYC
Sbjct: 61 TSGCTKGGFCKRVGRNGRHVCHCYC 82

[Close]

BLAST of IVF0010521 vs. ExPASy TrEMBL
Match: A0A0A0LWJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573030 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 45/84 (53.57%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 1  MAKVGFI-SCILIIFLVL--------AQLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSL 60
          MAK+G I S + + FLVL        AQLCCN H ELGSC+PG+DD +     DGKCW  
Sbjct: 1  MAKLGAIFSWVFVAFLVLYAGSMNTNAQLCCNNHRELGSCVPGVDDDY-----DGKCWHH 60

Query: 61 CSSGCVKGGFCKP--NNHICHCYC 74
          C  GC +GGFCK     H+CHCYC
Sbjct: 61 CIVGCERGGFCKKLWYGHVCHCYC 79

[Close]

BLAST of IVF0010521 vs. ExPASy TrEMBL
Match: A0A5D3CFQ3 (Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003350 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 46/84 (54.76%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 1  MAKVGFI-SCILIIFLVL--------AQLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSL 60
          MAK+G I   + I FLVL        AQLCCN HPELGSC PG+DD       DGKCW  
Sbjct: 1  MAKLGAIFGWVFIAFLVLYSGSKNTNAQLCCNNHPELGSCEPGVDD-----ASDGKCWLH 60

Query: 61 CSSGCVKGGFCK--PNNHICHCYC 74
          C +GC KGGFCK   + ++CHCYC
Sbjct: 61 CIAGCEKGGFCKQLTDKNVCHCYC 79

[Close]

BLAST of IVF0010521 vs. ExPASy TrEMBL
Match: A0A5D3CEJ1 (Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003360 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14
Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 18  AQLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCK--PNNHICHCYC 74
           AQLCCN HPELGSC PG+DD       DGKCW  C +GC KGGFCK   N ++CHCYC
Sbjct: 79  AQLCCNNHPELGSCEPGVDD-----ASDGKCWLHCIAGCEKGGFCKQLSNKNVCHCYC 131

[Close]

BLAST of IVF0010521 vs. ExPASy TrEMBL
Match: A0A1R3HCK7 (Putative defensin-like protein 20 OS=Corchorus olitorius OX=93759 GN=COLO4_29927 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.2e-13
Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 21 CCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFC---KPNNHICHCYC 74
          CCN HP LG C+PGID   DN   +GKCW+ C SGCVKGGFC   K  +H CHCYC
Sbjct: 33 CCNNHPSLGRCLPGID---DNPSSNGKCWAFCISGCVKGGFCKRMKDGHHECHCYC 85

[Close]

BLAST of IVF0010521 vs. NCBI nr
Match: XP_019087725.1 (PREDICTED: putative defensin-like protein 20 [Camelina sativa])

HSP 1 Score: 91.7 bits (226), Expect = 3.33e-22
Identity = 37/57 (64.91%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 19 QLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCKP--NNHICHCYC 73
           +CC EHP LG C+PGIDD+ DN   DGKCW  C  GC +GGFCKP  N HICHCYC
Sbjct: 35 SICCREHPSLGRCLPGIDDKADN---DGKCWKYCVEGCERGGFCKPFGNKHICHCYC 88

[Close]

BLAST of IVF0010521 vs. NCBI nr
Match: XP_010450072.1 (PREDICTED: putative defensin-like protein 20 [Camelina sativa] >XP_010450073.1 PREDICTED: putative defensin-like protein 20 [Camelina sativa] >XP_010497033.1 PREDICTED: putative defensin-like protein 20 [Camelina sativa])

HSP 1 Score: 88.2 bits (217), Expect = 8.72e-21
Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 19 QLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCK--PNNHICHCYC 73
           +CC EHP LG C+PGIDD+ DN   DGKCW  C  GC +GGFCK   N HICHCYC
Sbjct: 39 SICCREHPSLGRCLPGIDDKADN---DGKCWKYCVEGCERGGFCKLFGNKHICHCYC 92

[Close]

BLAST of IVF0010521 vs. NCBI nr
Match: TYK10190.1 (putative defensin-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 3.53e-20
Identity = 46/84 (54.76%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 1  MAKVGFI-SCILIIFLVL--------AQLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSL 60
          MAK+G I   + I FLVL        AQLCCN HPELGSC PG+DD       DGKCW  
Sbjct: 1  MAKLGAIFGWVFIAFLVLYSGSKNTNAQLCCNNHPELGSCEPGVDDA-----SDGKCWLH 60

Query: 61 CSSGCVKGGFCKP--NNHICHCYC 73
          C +GC KGGFCK   + ++CHCYC
Sbjct: 61 CIAGCEKGGFCKQLTDKNVCHCYC 79

[Close]

BLAST of IVF0010521 vs. NCBI nr
Match: KGN66133.1 (hypothetical protein Csa_007601 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 3.53e-20
Identity = 45/84 (53.57%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 1  MAKVGFI-SCILIIFLVL--------AQLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSL 60
          MAK+G I S + + FLVL        AQLCCN H ELGSC+PG+DD +D     GKCW  
Sbjct: 1  MAKLGAIFSWVFVAFLVLYAGSMNTNAQLCCNNHRELGSCVPGVDDDYD-----GKCWHH 60

Query: 61 CSSGCVKGGFCKP--NNHICHCYC 73
          C  GC +GGFCK     H+CHCYC
Sbjct: 61 CIVGCERGGFCKKLWYGHVCHCYC 79

[Close]

BLAST of IVF0010521 vs. NCBI nr
Match: XP_010544266.1 (PREDICTED: defensin-like protein 21 [Tarenaya hassleriana])

HSP 1 Score: 85.5 bits (210), Expect = 9.10e-20
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 18 AQLCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCKP--NNHICHCYC 73
          A  CC EHPELGSC+PGIDD  D+   DG+CW+ C+  C +GGFCK   N H CHCYC
Sbjct: 34 ASRCCREHPELGSCVPGIDDDGDS---DGRCWTFCAEDCARGGFCKAFGNTHKCHCYC 88

[Close]

BLAST of IVF0010521 vs. TAIR 10
Match: AT5G52605.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 1.5e-14
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 20 LCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCK--PNNHICHCYC 74
          +CC EHP +G C+PGID   D++  DGKCW  C  GC  GGFCK   + HICHC C
Sbjct: 36 ICCKEHPSVGRCLPGID---DDAEKDGKCWKFCIEGCETGGFCKLFEHKHICHCNC 88

[Close]

BLAST of IVF0010521 vs. TAIR 10
Match: AT4G14276.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 72.0 bits (175), Expect = 2.2e-13
Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 20 LCCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCK--PNNHICHCYC 74
          +CC EHP +G C+P IDD  +     GKCW  C  GC  GGFCK   + HICHC C
Sbjct: 40 ICCKEHPSVGRCLPNIDDSAEKG---GKCWKFCIEGCETGGFCKLFGHKHICHCNC 92

[Close]

BLAST of IVF0010521 vs. TAIR 10
Match: AT4G14272.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.4e-04
Identity = 20/47 (42.55%), Postives = 23/47 (48.94%), Query Frame = 0


Query: 21 CCNEHPELGSCIPGIDDRHDNSGDDGKCWSLCSSGCVKGGFCKPNNH 68
          C  EH E+G C+ GIDD   N   DGKCW  C          + NNH
Sbjct: 39 CNREHSEIGICLSGIDDDIQN---DGKCWKFCLMVAKAEVIMQTNNH 82

[Close]

BLAST of IVF0010521 vs. TAIR 10
Match: AT5G39645.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 41.6 bits (96), Expect = 3.2e-04
Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 0


Query: 20 LCCNEHPELGSCIPGIDDR 39
          +CC EHP LG C+PGIDDR
Sbjct: 40 ICCREHPSLGRCLPGIDDR 58

The following BLAST results are available for this feature:

BLAST of IVF0010521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V2S1	2.2e-13	55.36	Putative defensin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=At5g52605 P...	[more]
P0CAX9	3.1e-12	51.79	Defensin-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=At4g14276 PE=2 SV=1	[more]

BLAST of IVF0010521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ58	2.6e-17	54.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573070 PE=3 SV=1	[more]
A0A0A0LWJ9	1.5e-14	53.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573030 PE=3 SV=1	[more]
A0A5D3CFQ3	2.0e-14	54.76	Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3CEJ1	4.5e-14	63.79	Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1R3HCK7	2.2e-13	62.50	Putative defensin-like protein 20 OS=Corchorus olitorius OX=93759 GN=COLO4_29927...	[more]

BLAST of IVF0010521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_019087725.1	3.33e-22	64.91	PREDICTED: putative defensin-like protein 20 [Camelina sativa]	[more]
XP_010450072.1	8.72e-21	63.16	PREDICTED: putative defensin-like protein 20 [Camelina sativa] >XP_010450073.1 P...	[more]
TYK10190.1	3.53e-20	54.76	putative defensin-like protein 20 [Cucumis melo var. makuwa]	[more]
KGN66133.1	3.53e-20	53.57	hypothetical protein Csa_007601 [Cucumis sativus]	[more]
XP_010544266.1	9.10e-20	60.34	PREDICTED: defensin-like protein 21 [Tarenaya hassleriana]	[more]

BLAST of IVF0010521 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52605.1	1.5e-14	55.36	Defensin-like (DEFL) family protein	[more]
AT4G14276.1	2.2e-13	51.79	Defensin-like (DEFL) family protein	[more]
AT4G14272.1	1.4e-04	42.55	Defensin-like (DEFL) family protein	[more]
AT5G39645.1	3.2e-04	73.68	Defensin-like (DEFL) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022618	Defensin-like protein 20-27	PFAM	PF10868	Defensin_like	coord: 20..73 e-value: 2.0E-13 score: 50.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010521.1	IVF0010521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005576	extracellular region