IVF0004679 (gene) Melon (IVF77) v1

Overview


Name	IVF0004679
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Envelope-like protein
Location	chr02: 10271780 .. 10272366 (-)
RNA-Seq Expression	IVF0004679
Synteny	IVF0004679

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCGAAAGTTATCATGAGTCTGAGCATGAAGAGGTTGCTGCTGGAAGTGATGCAAAAGGTGTTGGAAATACACCAAGTGTCTCTGAGACTCACATTTTAGACATGGATTCAGATGAGTAAGATGATGTTCCGCTGGCTAGACTATTGAAGAAAGGTTTTGCTTCCAATGTCACTCCTACAAAATTTGTTGATCCTGTCATATTGGCTCGTTCTCAGGAAAGTTCTTCTGAAGTTGTGTTTATTCCTACACCTGGTCTTCATCGTGCATCCAATGACAAACCTTGTCCATCACAACACTCACCACCAATTAGGTCATCGATTTTGGATGACGTTCCTACTTCTAGTATGCATTCTGAACTTGCACCTGTTTCTATTAATGAATTTATTACAACTGAGGGAAGGACTGATGTTCCTACTAATGAGACCCTTGATGATGATAATGTTGAACCTACTAACATTAGTACAACTAATACTGTTGAACCAGATGTTAATAATGATTTTCAACTAGATGTTAATAATGATTTTCAACCCGAGACTCAACAATCTTCTGAAGTATCTAGGCCAATGGGGAAGAAATTTTAG

mRNA sequence

ATGCCTCCGAAAGTTATCATGAGTCTGAGCATGAAGAGGTTGCTGCTGGAAGTGATGCAAAAGGTACTATTGAAGAAAGGTTTTGCTTCCAATGTCACTCCTACAAAATTTGTTGATCCTGTCATATTGGCTCGTTCTCAGGAAAGTTCTTCTGAAGTTGTGTTTATTCCTACACCTGGTCTTCATCGTGCATCCAATGACAAACCTTGTCCATCACAACACTCACCACCAATTAGGTCATCGATTTTGGATGACGTTCCTACTTCTAGTATGCATTCTGAACTTGCACCTGTTTCTATTAATGAATTTATTACAACTGAGGGAAGGACTGATGTTCCTACTAATGAGACCCTTGATGATGATAATGTTGAACCTACTAACATTAGTACAACTAATACTGTTGAACCAGATGTTAATAATGATTTTCAACTAGATGTTAATAATGATTTTCAACCCGAGACTCAACAATCTTCTGAAGTATCTAGGCCAATGGGGAAGAAATTTTAG

Coding sequence (CDS)

ATGCCTCCGAAAGTTATCATGAGTCTGAGCATGAAGAGGTTGCTGCTGGAAGTGATGCAAAAGGTACTATTGAAGAAAGGTTTTGCTTCCAATGTCACTCCTACAAAATTTGTTGATCCTGTCATATTGGCTCGTTCTCAGGAAAGTTCTTCTGAAGTTGTGTTTATTCCTACACCTGGTCTTCATCGTGCATCCAATGACAAACCTTGTCCATCACAACACTCACCACCAATTAGGTCATCGATTTTGGATGACGTTCCTACTTCTAGTATGCATTCTGAACTTGCACCTGTTTCTATTAATGAATTTATTACAACTGAGGGAAGGACTGATGTTCCTACTAATGAGACCCTTGATGATGATAATGTTGAACCTACTAACATTAGTACAACTAATACTGTTGAACCAGATGTTAATAATGATTTTCAACTAGATGTTAATAATGATTTTCAACCCGAGACTCAACAATCTTCTGAAGTATCTAGGCCAATGGGGAAGAAATTTTAG

Protein sequence

MPPKVIMSLSMKRLLLEVMQKVLLKKGFASNVTPTKFVDPVILARSQESSSEVVFIPTPGLHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDDDNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSEVSRPMGKKF

Homology

[Close]

BLAST of IVF0004679 vs. ExPASy TrEMBL
Match: A0A5A7T4T2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002530 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 150/160 (93.75%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MPPKVIMSLSMKRLLLEVMQKVLLKKGFASNVTPTKFVDPVILARSQESSSEVVFIPTPG 60
           MPPKVIMSLSMKR         LLKKGFASNVTPTKFVDPVILARSQESSSEVVFIPTPG
Sbjct: 1   MPPKVIMSLSMKR---------LLKKGFASNVTPTKFVDPVILARSQESSSEVVFIPTPG 60

Query: 61  LHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDD 120
           LHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDD
Sbjct: 61  LHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDD 120

Query: 121 DNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSEV 161
           DNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSE+
Sbjct: 121 DNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSEI 151

[Close]

BLAST of IVF0004679 vs. ExPASy TrEMBL
Match: A0A5A7V2P0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1836G00020 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.7e-37
Identity = 97/147 (65.99%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 23  LLKKGFASNVTPTKFVDPVILARSQESSS-EVVFIPTPGLHRASNDKPCPSQHSPPIRSS 82
           LLKKGFASNV P K  DP I ARSQESSS E VF+PTP LH ASN +P PSQHS   RSS
Sbjct: 77  LLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKEPGPSQHSYSDRSS 136

Query: 83  ILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDDDNVEPTNISTTNTVEPDVNND 142
           I +DVPT + HS+ A + I+EFIT E RTDV  +ET DD+NVE  N  TTNTVE      
Sbjct: 137 ISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANTRTTNTVE------ 196

Query: 143 FQLDVNNDFQPETQQSSEVSRPMGKKF 169
             LDVNNDFQPETQQ  EVSRP GKKF
Sbjct: 197 --LDVNNDFQPETQQYPEVSRPTGKKF 215

[Close]

BLAST of IVF0004679 vs. ExPASy TrEMBL
Match: A0A1S3BQA7 (uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.7e-37
Identity = 97/147 (65.99%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 23  LLKKGFASNVTPTKFVDPVILARSQESSS-EVVFIPTPGLHRASNDKPCPSQHSPPIRSS 82
           LLKKGFASNV P K  DP I ARSQESSS E VF+PTP LH ASN +P PSQHS   RSS
Sbjct: 14  LLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKEPGPSQHSYSDRSS 73

Query: 83  ILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDDDNVEPTNISTTNTVEPDVNND 142
           I +DVPT + HS+ A + I+EFIT E RTDV  +ET DD+NVE  N  TTNTVE      
Sbjct: 74  ISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANTRTTNTVE------ 133

Query: 143 FQLDVNNDFQPETQQSSEVSRPMGKKF 169
             LDVNNDFQPETQQ  EVSRP GKKF
Sbjct: 134 --LDVNNDFQPETQQYPEVSRPTGKKF 152

[Close]

BLAST of IVF0004679 vs. ExPASy TrEMBL
Match: A0A5A7T1N8 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002720 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.5e-33
Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 23  LLKKGFASNVTPTKFVDPVILARSQE-SSSEVVFIPTPGLHRASNDKPCPSQHSPPIRSS 82
           LLKKGF SNV   K VDP+ILARSQE S  E VF+P PGLH ASN++P PS+HSPPIRSS
Sbjct: 210 LLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRSS 269

Query: 83  ILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDDDNVEPTNISTTNTVEPDVNND 142
           + DDV T ++H E APV ++EFITT+GRT V  ++T DD+NVE  N  TTN+V       
Sbjct: 270 VPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSV------- 329

Query: 143 FQLDVNNDFQPETQQSSE 160
            +LDVNNDFQPETQQS E
Sbjct: 330 -KLDVNNDFQPETQQSPE 339

[Close]

BLAST of IVF0004679 vs. ExPASy TrEMBL
Match: A0A5D3CC65 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00040 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.8e-24
Identity = 80/148 (54.05%), Postives = 91/148 (61.49%), Query Frame = 0


Query: 23  LLKKGFASNVTPTKFVDPVILARSQE-SSSEVVFIPTPGLHRASNDKPCPSQHSPPIRSS 82
           LLKKGF  NV  TK V+P+I ARSQE SSSE VFIPTPGL+ AS+ +P PSQHSPPIR+ 
Sbjct: 173 LLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQEPGPSQHSPPIRN- 232

Query: 83  ILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNET-LDDDNVEPTNISTTNTVEPDVNN 142
                                        DVP  ET +DD+NV+PTN   TN VEPDV++
Sbjct: 233 -----------------------------DVPAVETPIDDENVDPTNTDATNIVEPDVHD 282

Query: 143 DFQLDVNNDFQPETQQSSEVSRPMGKKF 169
           DFQL        ETQQSSEVSRP GKKF
Sbjct: 293 DFQL--------ETQQSSEVSRPKGKKF 282

[Close]

BLAST of IVF0004679 vs. NCBI nr
Match: KAA0038370.1 (uncharacterized protein E6C27_scaffold270G002530 [Cucumis melo var. makuwa])

HSP 1 Score: 281 bits (719), Expect = 3.47e-93
Identity = 150/160 (93.75%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MPPKVIMSLSMKRLLLEVMQKVLLKKGFASNVTPTKFVDPVILARSQESSSEVVFIPTPG 60
           MPPKVIMSLSMKRLL         KKGFASNVTPTKFVDPVILARSQESSSEVVFIPTPG
Sbjct: 1   MPPKVIMSLSMKRLL---------KKGFASNVTPTKFVDPVILARSQESSSEVVFIPTPG 60

Query: 61  LHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDD 120
           LHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDD
Sbjct: 61  LHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDD 120

Query: 121 DNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSEV 160
           DNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSE+
Sbjct: 121 DNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSEI 151

[Close]

BLAST of IVF0004679 vs. NCBI nr
Match: KAA0060145.1 (uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK19510.1 uncharacterized protein E5676_scaffold1836G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (409), Expect = 3.05e-46
Identity = 97/147 (65.99%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 23  LLKKGFASNVTPTKFVDPVILARSQESSS-EVVFIPTPGLHRASNDKPCPSQHSPPIRSS 82
           LLKKGFASNV P K  DP I ARSQESSS E VF+PTP LH ASN +P PSQHS   RSS
Sbjct: 77  LLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKEPGPSQHSYSDRSS 136

Query: 83  ILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDDDNVEPTNISTTNTVEPDVNND 142
           I +DVPT + HS+ A + I+EFIT E RTDV  +ET DD+NVE  N  TTNTVE      
Sbjct: 137 ISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANTRTTNTVE------ 196

Query: 143 FQLDVNNDFQPETQQSSEVSRPMGKKF 168
             LDVNNDFQPETQQ  EVSRP GKKF
Sbjct: 197 --LDVNNDFQPETQQYPEVSRPTGKKF 215

[Close]

BLAST of IVF0004679 vs. NCBI nr
Match: XP_008450465.1 (PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo])

HSP 1 Score: 162 bits (409), Expect = 6.07e-45
Identity = 97/147 (65.99%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 23  LLKKGFASNVTPTKFVDPVILARSQESSS-EVVFIPTPGLHRASNDKPCPSQHSPPIRSS 82
           LLKKGFASNV P K  DP I ARSQESSS E VF+PTP LH ASN +P PSQHS   RSS
Sbjct: 14  LLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKEPGPSQHSYSDRSS 73

Query: 83  ILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDDDNVEPTNISTTNTVEPDVNND 142
           I +DVPT + HS+ A + I+EFIT E RTDV  +ET DD+NVE  N  TTNTVE      
Sbjct: 74  ISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANTRTTNTVE------ 133

Query: 143 FQLDVNNDFQPETQQSSEVSRPMGKKF 168
             LDVNNDFQPETQQ  EVSRP GKKF
Sbjct: 134 --LDVNNDFQPETQQYPEVSRPTGKKF 152

[Close]

BLAST of IVF0004679 vs. NCBI nr
Match: KAA0035507.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK31022.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 150 bits (378), Expect = 1.36e-39
Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 23  LLKKGFASNVTPTKFVDPVILARSQESSS-EVVFIPTPGLHRASNDKPCPSQHSPPIRSS 82
           LLKKGF SNV   K VDP+ILARSQE S  E VF+P PGLH ASN++P PS+HSPPIRSS
Sbjct: 210 LLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRSS 269

Query: 83  ILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNETLDDDNVEPTNISTTNTVEPDVNND 142
           + DDV T ++H E APV ++EFITT+GRT V  ++T DD+NVE  N  TTN+V       
Sbjct: 270 VPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSV------- 329

Query: 143 FQLDVNNDFQPETQQSSE 159
            +LDVNNDFQPETQQS E
Sbjct: 330 -KLDVNNDFQPETQQSPE 339

[Close]

BLAST of IVF0004679 vs. NCBI nr
Match: TYK05410.1 (uncharacterized protein E5676_scaffold83G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 121 bits (303), Expect = 1.79e-31
Identity = 66/112 (58.93%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 58  TPGLHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRTDVPTNET 117
           TPGLH AS+++P P +HSPP+RSS+ DDV + + HS+LAPV ++EF  TEGR DV  +ET
Sbjct: 19  TPGLHHASSEEPGPLRHSPPVRSSVPDDVTSPNPHSKLAPVPVDEFTETEGRIDVSDDET 78

Query: 118 -LDDDNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSEVSRPMGKKF 168
            ++D+NVEPTN  TTNTVEP+V+NDFQL +        QQS E+SR MGKKF
Sbjct: 79  SVNDENVEPTNTGTTNTVEPNVHNDFQLGI--------QQSPEISRRMGKKF 122

The following BLAST results are available for this feature:

BLAST of IVF0004679 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0004679 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4T2	1.7e-72	93.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V2P0	8.7e-37	65.99	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BQA7	8.7e-37	65.99	uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=...	[more]
A0A5A7T1N8	4.5e-33	63.04	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3CC65	3.8e-24	54.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0004679 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038370.1	3.47e-93	93.75	uncharacterized protein E6C27_scaffold270G002530 [Cucumis melo var. makuwa]	[more]
KAA0060145.1	3.05e-46	65.99	uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_008450465.1	6.07e-45	65.99	PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo]	[more]
KAA0035507.1	1.36e-39	63.04	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK31022.1 putative m...	[more]
TYK05410.1	1.79e-31	58.93	uncharacterized protein E5676_scaffold83G00980 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0004679 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004679.1	IVF0004679.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane