Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCACCACCGAAAGCAGCGACAACCACGAAGGGTAAACGCTACAAGGGTATTCCAACGAGACATCCTTTTAAGAAAATCCACCGGTTAGTGGTAGCAACTGATGTCGATCAGCACAGTCTGTATGCAGGCCGTTTCTCTAACCCCATGTCTCCTGTTACTGTAAAAAGGGAGGTTCCTTCTAGGGTGTCAGTTGAGACAGTGGTATTAGATTCTGATTCCTCCGATGGTACTAACAATATTATTCTGTCTAAACTCTTTCATCGAAAGACTGGACATCGAACTGATCCGTCCTCTACTCCTTCTCACCCGACTCAGGTTTTGCACTCTCCATCTCAATCTGCTTCACCTCCTAAGGATGTTTCCTCTCGACCTATGGACCATGGTAAGTCTTCTACTGCTTCCTCGTTTCTAGCTTATCCACAAACCTCTCTCCCAACTGATGATGATGGTGCGAGTGATGACACTAACGAGATTATGTTCCTGTACCTGAGGACCTTCTTGCACTAGAGGAAACCAGGACTTCTACTAAGGATCCTGTGTCCTCCCCTGATAATTGAACATCCGAAACTCAGTCAACTGAAGGACATGGTGATTCCTCTATTTTGATGTCACCTCCCGAGCATGTTGGTTCCTCCTATAGACCCCGTCGTCCACCTGTCAAGGGCCAACGCGTAATTTCAACCAAGGCTAATTGTCGGAAGATACCTCCGAATGTATCCTCTGTGTCGATAGATGGTGTGTCGTTTCATTCTGAGGAAGGACCACACAAATGGAAATATGTTGTTAAATGACGCATTGCAGATGAAACAAATCTTTCTTATCAGTTTAATTCCTACTCTGCCATTCTTGACTTAATTTGCACTATTGGTCTACTTCGTACTATATTTGAGGTTGGTCCTTTCTATCTTTAACTTATCCAAGAACTAGTTGTTAATCTGCCTTCTGATTTTAATGATCTGAGTGCTGAGGAGTTCTACAAGGTGCATATCTGAGGCGTATGTTTTAATGTTTCTCCTGAATTACTTAATCAATTCCTAGGCATTTCACTATCGACTGACTATGCTGTTTCATACCCCAATCCTGAGCGCCTGACTGAAGAAGTTGCTGAGGGAACAGAACCTGTCTGACCAGTTGATGGACAACTTTCTGTTGCATCTTTAACATTCAACTATGCAAATCTCCATCAGATTGGTATCTCCAATTGGATTCCCTCTACTTATGCATCTACAATCGCTACTTCTCTAGATCACTTTGTCTATCTTATGGGCACCAAAGTCAAGGTGAATGTTGGAGAATTTATTTTTAATCACTTACTGTGACATGTTGATATGTTTGCAATCCATATACCCATATGCTTTCTAAGACTTCTGAGTGGCTTTCTGTTATCCCAACAATCGGCTATTCTGACTCTGCTTGATGTTACTGGCACAGCTTTGCGCATTATTTCGTTGAGTATCATTTGTTTCAAGGCTCCCATATTCCAGATGTTGCTGTTGAATTTGACAATGCACCTGGACAGATTAAGTCTGCTGCTGCCACGCACTCTACTGTTGGTCAGTCGCTGGTCCTCTTTATCTTGTTAGCCAATCTCCTGTTACAAGCATTGATGGTAGAATCTCGTTCCCTCACTCGCCATATTAGTGAGCTCTTTGATAGGCGCACTATGTTGGATGCTATTTTATGCGACCTTCGACGTGTAGCTTTCGGACCTTCACCTTCTCCGTCAAAACATCAGGACTGA
mRNA sequence
ATGGCTTCTTCACCACCGAAAGCAGCGACAACCACGAAGGGTAAACGCTACAAGGGTATTCCAACGAGACATCCTTTTAAGAAAATCCACCGGTTAGTGGTAGCAACTGATGTCGATCAGCACAGTCTGTATGCAGGCCGTTTCTCTAACCCCATGTCTCCTGTTACTGTAAAAAGGGAGGTTCCTTCTAGGGTGTCAGTTGAGACAGTGGTATTAGATTCTGATTCCTCCGATGGTACTAACAATATTATTCTGTTTTGCACTCTCCATCTCAATCTGCTTCACCTCCTAAGGATGTTTCCTCTCGACCTATGGACCATGGACCTTCTTGCACTAGAGGAAACCAGGACTTCTACTAAGGATCCTTCAACTGAAGGACATGGTGATTCCTCTATTTTGATGTCACCTCCCGAGCATGTTGGTTCCTCCTATAGACCCCGTCGTCCACCTGTCAAGGGCCAACGCGTAATTTCAACCAAGGCTAATTGTCGGAAGATACCTCCGAATGTATCCTCTGTGTCGATAGATGGTGTCTTTGCGCATTATTTCGTTGAGTATCATTTGTTTCAAGGCTCCCATATTCCAGATGTTGCTGTTGAATTTGACAATGCACCTGGACAGATTAAGTCTGCTGCTGCCACGCACTCTACTGTTGGTCAGTCGCTGGTCCTCTTTATCTTGTTAGCCAATCTCCTGTTACAAGCATTGATGGTAGAATCTCGTTCCCTCACTCGCCATATTAGTGAGCTCTTTGATAGGCGCACTATGTTGGATGCTATTTTATGCGACCTTCGACGTGTAGCTTTCGGACCTTCACCTTCTCCGTCAAAACATCAGGACTGA
Coding sequence (CDS)
ATGGCTTCTTCACCACCGAAAGCAGCGACAACCACGAAGGGTAAACGCTACAAGGGTATTCCAACGAGACATCCTTTTAAGAAAATCCACCGGTTAGTGGTAGCAACTGATGTCGATCAGCACAGTCTGTATGCAGGCCGTTTCTCTAACCCCATGTCTCCTGTTACTGTAAAAAGGGAGGTTCCTTCTAGGGTGTCAGTTGAGACAGTGGTATTAGATTCTGATTCCTCCGATGGTACTAACAATATTATTCTGTTTTGCACTCTCCATCTCAATCTGCTTCACCTCCTAAGGATGTTTCCTCTCGACCTATGGACCATGGACCTTCTTGCACTAGAGGAAACCAGGACTTCTACTAAGGATCCTTCAACTGAAGGACATGGTGATTCCTCTATTTTGATGTCACCTCCCGAGCATGTTGGTTCCTCCTATAGACCCCGTCGTCCACCTGTCAAGGGCCAACGCGTAATTTCAACCAAGGCTAATTGTCGGAAGATACCTCCGAATGTATCCTCTGTGTCGATAGATGGTGTCTTTGCGCATTATTTCGTTGAGTATCATTTGTTTCAAGGCTCCCATATTCCAGATGTTGCTGTTGAATTTGACAATGCACCTGGACAGATTAAGTCTGCTGCTGCCACGCACTCTACTGTTGGTCAGTCGCTGGTCCTCTTTATCTTGTTAGCCAATCTCCTGTTACAAGCATTGATGGTAGAATCTCGTTCCCTCACTCGCCATATTAGTGAGCTCTTTGATAGGCGCACTATGTTGGATGCTATTTTATGCGACCTTCGACGTGTAGCTTTCGGACCTTCACCTTCTCCGTCAAAACATCAGGACTGA
Protein sequence
MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKREVPSRVSVETVVLDSDSSDGTNNIILFCTLHLNLLHLLRMFPLDLWTMDLLALEETRTSTKDPSTEGHGDSSILMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKIPPNVSSVSIDGVFAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLANLLLQALMVESRSLTRHISELFDRRTMLDAILCDLRRVAFGPSPSPSKHQD
Homology
BLAST of IVF0000722 vs. ExPASy TrEMBL
Match:
A0A5A7T741 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00110 PE=4 SV=1)
HSP 1 Score: 355.9 bits (912), Expect = 1.5e-94
Identity = 208/290 (71.72%), Postives = 215/290 (74.14%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE 60
MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE
Sbjct: 29 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE 88
Query: 61 VPSRVSVETVVLDSDSSDGTNNIILFCTLHLNLLHLLRMFPLDLWTMDLLALEETRTSTK 120
VPSRVSVETVVLDSDSSDGTNNIIL H H R P +ST
Sbjct: 89 VPSRVSVETVVLDSDSSDGTNNIILSKLFHRKTGH--RTDP---------------SSTP 148
Query: 121 DPSTEGHGDSSILMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKIPPNVSSVSIDG--- 180
T+ S SPP+ V S RP G+ ST ++ P DG
Sbjct: 149 SHPTQVLHSPSQSASPPKDVSS-----RPMDHGKS--STASSFLAYPQTSLPTDDDGASD 208
Query: 181 -------VFAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLAN 240
+FAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLAN
Sbjct: 209 DTNEIMFLFAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLAN 268
Query: 241 LLLQALMVESRSLTRHISELFDRRTMLDAILCDLRRVAFGPSPSPSKHQD 281
LLLQALMVESRSLTRHISELFDRRTMLDAILCDLRRVAFGPSPSPSKHQD
Sbjct: 269 LLLQALMVESRSLTRHISELFDRRTMLDAILCDLRRVAFGPSPSPSKHQD 294
BLAST of IVF0000722 vs. ExPASy TrEMBL
Match:
A0A5D3DV20 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold742G00050 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 2.5e-52
Identity = 152/345 (44.06%), Postives = 181/345 (52.46%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQ--------HSLYAGRFSNPM 60
MA SP K AT+ K KRYKGIPT+HP+KKI + Q H + G+ S P+
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381
Query: 61 SPVTVKREVPS------------------RVSVETVVLDSDSSDGTNNIILFCTLHLNL- 120
S VTVKREVP RVSVETVV+D DS D +N++L LH +
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441
Query: 121 ------------LHLLRMFPLDL---------------WTMDLLALEETRTSTKDPS--- 180
H L T + LE++ TST+D S
Sbjct: 442 SRSGHSLAAPSSPHASPQASLSTDEDDASNKTDEDYVPRTEETTVLEDSSTSTEDLSVSH 501
Query: 181 ---------TEGHGDSSILMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKIPPNVSSVS 240
T+G + MS P HVGSS+ RR PV+GQRV+STKA RKIPP+V SVS
Sbjct: 502 GTRMSEPRLTKGPDEFFTPMSRPGHVGSSFSLRRLPVRGQRVVSTKAGQRKIPPHVPSVS 561
Query: 241 IDGVFAH----YFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLAN 276
ID + LFQGSHIPDVA F+NAP S AAT+ T+GQ LVLF+ LAN
Sbjct: 562 IDDTVGTALRIILLSMQLFQGSHIPDVAAAFENAPRGTSSVAATNLTIGQPLVLFVSLAN 621
BLAST of IVF0000722 vs. ExPASy TrEMBL
Match:
A0A5A7U568 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00060 PE=4 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 3.9e-50
Identity = 149/341 (43.70%), Postives = 177/341 (51.91%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQ--------HSLYAGRFSNPM 60
MA SP K AT+ K KRYKGIPT+HP+KKI + Q H + G+ S P+
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381
Query: 61 SPVTVKREVPS------------------RVSVETVVLDSDSSDGTNNIILFCTLHLNL- 120
S VTVKREVP RVSVETVV+D DS D +N++L LH +
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441
Query: 121 ------------LHLLRMFPLDL---------------WTMDLLALEETRTSTKDPS--- 180
H L T + LE++ TST+D S
Sbjct: 442 SRSGHSLAAPSSPHASPQASLSTDEDDASNKTDEDYVPRTEETTVLEDSSTSTEDLSVSH 501
Query: 181 ---------TEGHGDSSILMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKIPPNVSSVS 240
T+G + MS P HVGSS+ RR PV+GQRV+STKA RKIPP+V SVS
Sbjct: 502 GTRMSEPRLTKGPDEFFTPMSRPGHVGSSFSLRRLPVRGQRVVSTKAGQRKIPPHVPSVS 561
Query: 241 IDGVFAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLANLLLQ 276
ID GSHIPDVA F+NAP S AAT+ T+GQ LVLF+ LAN LLQ
Sbjct: 562 ID--------------GSHIPDVAAAFENAPRGTSSVAATNLTIGQPLVLFVSLANRLLQ 621
BLAST of IVF0000722 vs. ExPASy TrEMBL
Match:
A0A5D3C7Y0 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001560 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 2.5e-36
Identity = 157/475 (33.05%), Postives = 190/475 (40.00%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE 60
MA SPPK ATTTKG QHS++A R +P+S VT+K+E
Sbjct: 1 MAPSPPKTATTTKG-------------------------QHSVHARRSPDPVSLVTIKKE 60
Query: 61 VP------------------SRVSVETVVLDSDSSDGTNNII---LFCTLHLNLLHLLRM 120
V S+VSVETVVLDS+ DGT+N+I LF + +
Sbjct: 61 VSKVSPSRTSHSSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRSAPSFIASPQAS 120
Query: 121 FPLD-------------LWTMDLLALEETRTSTKD------------PSTEGHGDSSILM 180
P D + T D LA +E TST+D STEG +SSILM
Sbjct: 121 LPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQSTEGPSESSILM 180
Query: 181 SPPEHVGSSYRPRRPPVKGQRVISTKANCRKI---------------------------- 240
SPP+HVGSS +P PP+KGQRVISTKA C I
Sbjct: 181 SPPKHVGSSSKPHHPPIKGQRVISTKA-CPAILDLICNAGLLRTIFEVGLFYPQLIYELV 240
Query: 241 ---PPNVSSVS---------------------IDG------------------------- 281
P + + +S +DG
Sbjct: 241 VNQPSDFNDLSAEEFHKRLAEELTGGIVPVWIVDGQLPIAYLTVKYAILHWIGISNWIPS 300
BLAST of IVF0000722 vs. ExPASy TrEMBL
Match:
A0A5A7UTK0 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00790 PE=4 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 3.6e-35
Identity = 157/486 (32.30%), Postives = 189/486 (38.89%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE 60
MA SPPK ATTTKG QHS++A R +P+S VT+K+E
Sbjct: 1 MAPSPPKTATTTKG-------------------------QHSVHARRSPDPVSLVTIKKE 60
Query: 61 VP------------------SRVSVETVVLDSDSSDGTNNIIL-----FCTLHLNLLHLL 120
V S+VSVETVVLDS+ DGT+N+IL F +
Sbjct: 61 VSKVSPSRTSHSSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRFSAAPSFIASPQ 120
Query: 121 RMFPLD-------------LWTMDLLALEETRTSTKD------------PSTEGHGDSSI 180
P D + T D LA +E TST+D STEG +SSI
Sbjct: 121 ASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQSTEGPSESSI 180
Query: 181 LMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKI-------------------------- 240
LMSPP+HVGSS +P PP+KGQRVISTKA C I
Sbjct: 181 LMSPPKHVGSSSKPHHPPIKGQRVISTKA-CPAILDLICNAGLLRTIFEVGLFYPQLIYE 240
Query: 241 -----PPNVSSVS------------------------------IDG-------------- 281
P + + +S +DG
Sbjct: 241 LVVNQPSDFNDLSAEEFHKVHIWGVCFNRLAEELTGGIVPVWIVDGQLPIAYLTVKYAIL 300
BLAST of IVF0000722 vs. NCBI nr
Match:
KAA0039070.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYJ99735.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 355 bits (912), Expect = 3.91e-120
Identity = 208/290 (71.72%), Postives = 215/290 (74.14%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE 60
MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE
Sbjct: 29 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE 88
Query: 61 VPSRVSVETVVLDSDSSDGTNNIILFCTLHLNLLHLLRMFPLDLWTMDLLALEETRTSTK 120
VPSRVSVETVVLDSDSSDGTNNIIL H H R P +ST
Sbjct: 89 VPSRVSVETVVLDSDSSDGTNNIILSKLFHRKTGH--RTDP---------------SSTP 148
Query: 121 DPSTEGHGDSSILMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKIPPNVSSVSIDG--- 180
T+ S SPP+ V S RP G+ ST ++ P DG
Sbjct: 149 SHPTQVLHSPSQSASPPKDVSS-----RPMDHGKS--STASSFLAYPQTSLPTDDDGASD 208
Query: 181 -------VFAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLAN 240
+FAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLAN
Sbjct: 209 DTNEIMFLFAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLAN 268
Query: 241 LLLQALMVESRSLTRHISELFDRRTMLDAILCDLRRVAFGPSPSPSKHQD 280
LLLQALMVESRSLTRHISELFDRRTMLDAILCDLRRVAFGPSPSPSKHQD
Sbjct: 269 LLLQALMVESRSLTRHISELFDRRTMLDAILCDLRRVAFGPSPSPSKHQD 294
BLAST of IVF0000722 vs. NCBI nr
Match:
TYK27533.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 216 bits (550), Expect = 1.69e-61
Identity = 152/345 (44.06%), Postives = 181/345 (52.46%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSL--------YAGRFSNPM 60
MA SP K AT+ K KRYKGIPT+HP+KKI + QH + G+ S P+
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381
Query: 61 SPVTVKREVPS------------------RVSVETVVLDSDSSDGTNNIILFCTLHLNL- 120
S VTVKREVP RVSVETVV+D DS D +N++L LH +
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441
Query: 121 ------------LHLLRMFPLDL---------------WTMDLLALEETRTSTKDPS--- 180
H L T + LE++ TST+D S
Sbjct: 442 SRSGHSLAAPSSPHASPQASLSTDEDDASNKTDEDYVPRTEETTVLEDSSTSTEDLSVSH 501
Query: 181 ---------TEGHGDSSILMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKIPPNVSSVS 240
T+G + MS P HVGSS+ RR PV+GQRV+STKA RKIPP+V SVS
Sbjct: 502 GTRMSEPRLTKGPDEFFTPMSRPGHVGSSFSLRRLPVRGQRVVSTKAGQRKIPPHVPSVS 561
Query: 241 IDGVFAH----YFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLAN 275
ID + LFQGSHIPDVA F+NAP S AAT+ T+GQ LVLF+ LAN
Sbjct: 562 IDDTVGTALRIILLSMQLFQGSHIPDVAAAFENAPRGTSSVAATNLTIGQPLVLFVSLAN 621
BLAST of IVF0000722 vs. NCBI nr
Match:
KAA0050418.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 208 bits (530), Expect = 1.00e-58
Identity = 149/341 (43.70%), Postives = 177/341 (51.91%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSL--------YAGRFSNPM 60
MA SP K AT+ K KRYKGIPT+HP+KKI + QH + G+ S P+
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381
Query: 61 SPVTVKREVPS------------------RVSVETVVLDSDSSDGTNNIILFCTLHLNL- 120
S VTVKREVP RVSVETVV+D DS D +N++L LH +
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441
Query: 121 ------------LHLLRMFPLDL---------------WTMDLLALEETRTSTKDPS--- 180
H L T + LE++ TST+D S
Sbjct: 442 SRSGHSLAAPSSPHASPQASLSTDEDDASNKTDEDYVPRTEETTVLEDSSTSTEDLSVSH 501
Query: 181 ---------TEGHGDSSILMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKIPPNVSSVS 240
T+G + MS P HVGSS+ RR PV+GQRV+STKA RKIPP+V SVS
Sbjct: 502 GTRMSEPRLTKGPDEFFTPMSRPGHVGSSFSLRRLPVRGQRVVSTKAGQRKIPPHVPSVS 561
Query: 241 IDGVFAHYFVEYHLFQGSHIPDVAVEFDNAPGQIKSAAATHSTVGQSLVLFILLANLLLQ 275
IDG SHIPDVA F+NAP S AAT+ T+GQ LVLF+ LAN LLQ
Sbjct: 562 IDG--------------SHIPDVAAAFENAPRGTSSVAATNLTIGQPLVLFVSLANRLLQ 621
BLAST of IVF0000722 vs. NCBI nr
Match:
TYK07258.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 163 bits (412), Expect = 4.24e-43
Identity = 159/475 (33.47%), Postives = 191/475 (40.21%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE 60
MA SPPK ATTTKG QHS++A R +P+S VT+K+E
Sbjct: 1 MAPSPPKTATTTKG-------------------------QHSVHARRSPDPVSLVTIKKE 60
Query: 61 V----PSR--------------VSVETVVLDSDSSDGTNNIIL---FCTLHLNLLHLLRM 120
V PSR VSVETVVLDS+ DGT+N+IL F + +
Sbjct: 61 VSKVSPSRTSHSSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRSAPSFIASPQAS 120
Query: 121 FPLD-------------LWTMDLLALEETRTSTKD------------PSTEGHGDSSILM 180
P D + T D LA +E TST+D STEG +SSILM
Sbjct: 121 LPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQSTEGPSESSILM 180
Query: 181 SPPEHVGSSYRPRRPPVKGQRVISTKANCRKI---------------------------- 240
SPP+HVGSS +P PP+KGQRVISTKA C I
Sbjct: 181 SPPKHVGSSSKPHHPPIKGQRVISTKA-CPAILDLICNAGLLRTIFEVGLFYPQLIYELV 240
Query: 241 ---PPNVSSVS---------------------IDG------------------------- 280
P + + +S +DG
Sbjct: 241 VNQPSDFNDLSAEEFHKRLAEELTGGIVPVWIVDGQLPIAYLTVKYAILHWIGISNWIPS 300
BLAST of IVF0000722 vs. NCBI nr
Match:
KAA0058488.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 159 bits (402), Expect = 1.48e-41
Identity = 158/486 (32.51%), Postives = 190/486 (39.09%), Query Frame = 0
Query: 1 MASSPPKAATTTKGKRYKGIPTRHPFKKIHRLVVATDVDQHSLYAGRFSNPMSPVTVKRE 60
MA SPPK ATTTKG QHS++A R +P+S VT+K+E
Sbjct: 1 MAPSPPKTATTTKG-------------------------QHSVHARRSPDPVSLVTIKKE 60
Query: 61 V----PSR--------------VSVETVVLDSDSSDGTNNIILFCTLHLN-----LLHLL 120
V PSR VSVETVVLDS+ DGT+N+IL + +
Sbjct: 61 VSKVSPSRTSHSSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRFSAAPSFIASPQ 120
Query: 121 RMFPLD-------------LWTMDLLALEETRTSTKD------------PSTEGHGDSSI 180
P D + T D LA +E TST+D STEG +SSI
Sbjct: 121 ASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQSTEGPSESSI 180
Query: 181 LMSPPEHVGSSYRPRRPPVKGQRVISTKANCRKI-------------------------- 240
LMSPP+HVGSS +P PP+KGQRVISTKA C I
Sbjct: 181 LMSPPKHVGSSSKPHHPPIKGQRVISTKA-CPAILDLICNAGLLRTIFEVGLFYPQLIYE 240
Query: 241 -----PPNVSSVS------------------------------IDG-------------- 280
P + + +S +DG
Sbjct: 241 LVVNQPSDFNDLSAEEFHKVHIWGVCFNRLAEELTGGIVPVWIVDGQLPIAYLTVKYAIL 300
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7T741 | 1.5e-94 | 71.72 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3DV20 | 2.5e-52 | 44.06 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
| A0A5A7U568 | 3.9e-50 | 43.70 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |
| A0A5D3C7Y0 | 2.5e-36 | 33.05 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7UTK0 | 3.6e-35 | 32.30 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0039070.1 | 3.91e-120 | 71.72 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYJ99735.1 flocculat... | [more] |
| TYK27533.1 | 1.69e-61 | 44.06 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0050418.1 | 1.00e-58 | 43.70 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| TYK07258.1 | 4.24e-43 | 33.47 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| KAA0058488.1 | 1.48e-41 | 32.51 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
