IVF0009568 (gene) Melon (IVF77) v1

Overview
NameIVF0009568
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 27291046 .. 27291240 (-)
RNA-Seq ExpressionIVF0009568
SyntenyIVF0009568
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACCAAAAAACAAAAAGTAGACCACCTTGAGGTTGTGGCAGAAGAATTTACAAAGGAAATTGAGAATATGAGTCAATTAGAGCCAAGGCTATCGCCTGATGAACATGGACTAAGAGAAGCCCCCAACCCAAGAAAATCAAGAGCAAGCCTAAGACATCTTGACTTGATGATGCCAAACAAGGTGGAGTAA

mRNA sequence

ATGGCCACCAAAAAACAAAAAGTAGACCACCTTGAGGTTGTGGCAGAAGAATTTACAAAGGAAATTGAGAATATGAGTCAATTAGAGCCAAGGCTATCGCCTGATGAACATGGACTAAGAGAAGCCCCCAACCCAAGAAAATCAAGAGCAAGCCTAAGACATCTTGACTTGATGATGCCAAACAAGGTGGAGTAA

Coding sequence (CDS)

ATGGCCACCAAAAAACAAAAAGTAGACCACCTTGAGGTTGTGGCAGAAGAATTTACAAAGGAAATTGAGAATATGAGTCAATTAGAGCCAAGGCTATCGCCTGATGAACATGGACTAAGAGAAGCCCCCAACCCAAGAAAATCAAGAGCAAGCCTAAGACATCTTGACTTGATGATGCCAAACAAGGTGGAGTAA

Protein sequence

MATKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSRASLRHLDLMMPNKVE
Homology
BLAST of IVF0009568 vs. ExPASy TrEMBL
Match: A0A5A7VMZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001080 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14
Identity = 43/50 (86.00%), Postives = 48/50 (96.00%), Query Frame = 0

Query: 1  MATKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSRA 51
          MAT+KQ+VDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAP P+K ++
Sbjct: 1  MATEKQEVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPQPKKIKS 50

BLAST of IVF0009568 vs. ExPASy TrEMBL
Match: A0A5A7TQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00290 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-07
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 2   ATKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSRA 51
           AT+ QKVDHLEVVAEEF+KEIE MS LEPRLSP+E  L+E   P+K ++
Sbjct: 86  ATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQPKKKKS 134

BLAST of IVF0009568 vs. ExPASy TrEMBL
Match: A0A5A7VMM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00090 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.8e-06
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 0

Query: 3  TKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSRASLRHLDLMMPNK 62
          TK+Q+ D  +V  EEFTKE+ENMS +EPR+SP +  LR A  P+K +  L + D MM NK
Sbjct: 8  TKRQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKKKKGLGYPDPMMHNK 67

BLAST of IVF0009568 vs. ExPASy TrEMBL
Match: A0A5D3BC25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold791G00110 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.8e-06
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 3  TKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSRASLRHLDLMMPNK 62
          T++Q+ D  +V  EEFTKE+ENMS +EPR+SP +  LR A  P K++  L + D MM NK
Sbjct: 8  TERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPNKTKKGLGYPDPMMHNK 67

Query: 63 V 64
          V
Sbjct: 68 V 68

BLAST of IVF0009568 vs. ExPASy TrEMBL
Match: A0A5A7V2R9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold542G00500 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-05
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0

Query: 2  ATKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSR 50
          AT+ Q VDHLEVVAEEF KEIE MS LEPRL P+E GL  A   +K +
Sbjct: 35 ATETQGVDHLEVVAEEFNKEIERMSHLEPRLKPEEQGLVNAAQLKKDK 82

BLAST of IVF0009568 vs. NCBI nr
Match: KAA0067936.1 (hypothetical protein E6C27_scaffold138G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 1.31e-20
Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = 0

Query: 1  MATKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRK 47
          MAT+KQ+VDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAP P+K
Sbjct: 1  MATEKQEVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPQPKK 47

BLAST of IVF0009568 vs. NCBI nr
Match: KAA0043535.1 (hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 3.01e-10
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 2   ATKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSRA 50
           AT+ QKVDHLEVVAEEF+KEIE MS LEPRLSP+E  L+E   P+K ++
Sbjct: 86  ATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQPKKKKS 134

BLAST of IVF0009568 vs. NCBI nr
Match: TYJ96579.1 (hypothetical protein E5676_scaffold791G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 4.40e-09
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 3  TKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSRASLRHLDLMMPNK 62
          T++Q+ D  +V  EEFTKE+ENMS +EPR+SP +  LR A  P K++  L + D MM NK
Sbjct: 8  TERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPNKTKKGLGYPDPMMHNK 67

BLAST of IVF0009568 vs. NCBI nr
Match: KAA0067806.1 (hypothetical protein E6C27_scaffold2484G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 8.32e-09
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 0

Query: 3  TKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSRASLRHLDLMMPNK 62
          TK+Q+ D  +V  EEFTKE+ENMS +EPR+SP +  LR A  P+K +  L + D MM NK
Sbjct: 8  TKRQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKKKKGLGYPDPMMHNK 67

BLAST of IVF0009568 vs. NCBI nr
Match: KAA0060175.1 (hypothetical protein E6C27_scaffold542G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.27e-08
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0

Query: 2  ATKKQKVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPNPRKSR 49
          AT+ Q VDHLEVVAEEF KEIE MS LEPRL P+E GL  A   +K +
Sbjct: 35 ATETQGVDHLEVVAEEFNKEIERMSHLEPRLKPEEQGLVNAAQLKKDK 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VMZ41.8e-1486.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TQ541.6e-0767.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VMM86.8e-0651.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BC258.8e-0650.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V2R91.5e-0564.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0067936.11.31e-2091.49hypothetical protein E6C27_scaffold138G001080 [Cucumis melo var. makuwa][more]
KAA0043535.13.01e-1067.35hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa][more]
TYJ96579.14.40e-0950.82hypothetical protein E5676_scaffold791G00110 [Cucumis melo var. makuwa][more]
KAA0067806.18.32e-0951.67hypothetical protein E6C27_scaffold2484G00090 [Cucumis melo var. makuwa][more]
KAA0060175.11.27e-0864.58hypothetical protein E6C27_scaffold542G00500 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009568.1IVF0009568.1mRNA