IVF0003232 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATATGATTAAAGAAGGAGGATCTACTACTCGTCCACCAGTTCTTGATGGCATAAATTATGCTTATTGGAAGGCTCGTATGACAGCTTTTCTCAAATCAATTGACAATAAAACCTGGAAAGCTGTCATCTCCAGTTGGGAGCCACCTACTATTACTATAAAAGACAAATCTACACAAAACGAGAATCTGATTGGACTGATGCTGAAGATCAAGCTTCTCTTGGCAACTCTCGTGCCCTTAATGCTATTTATAATGATCAAAATGTATTTAAATTAATAAATACTTGTACATCTGCAAAAGAAGCTTGGAAAATTCTTGAAGTTGCATATGAAGGAACGTCAAAGGTAAAAACTTCTCTATTACAATTGTTGAGTTCGACTGCTTGA ATGAATATGATTAAAGAAGGAGGATCTACTACTCGTCCACCAGTTCTTGATGGCATAAATTATGCTTATTGGAAGGCTCGTATGACAGCTTTTCTCAAATCAATTGACAATAAAACCTGGAAAGCTGTCATCTCCAAATCTGATTGGACTGATGCTGAAGATCAAGCTTCTCTTGGCAACTCTCGTGCCCTTAATGCTATTTATAATGATCAAAATGTATTTAAATTAATAAATACTTGTACATCTGCAAAAGAAGCTTGGAAAATTCTTGAAGTTGCATATGAAGGAACGTCAAAGGTAAAAACTTCTCTATTACAATTGTTGAGTTCGACTGCTTGA ATGAATATGATTAAAGAAGGAGGATCTACTACTCGTCCACCAGTTCTTGATGGCATAAATTATGCTTATTGGAAGGCTCGTATGACAGCTTTTCTCAAATCAATTGACAATAAAACCTGGAAAGCTGTCATCTCCAAATCTGATTGGACTGATGCTGAAGATCAAGCTTCTCTTGGCAACTCTCGTGCCCTTAATGCTATTTATAATGATCAAAATGTATTTAAATTAATAAATACTTGTACATCTGCAAAAGAAGCTTGGAAAATTCTTGAAGTTGCATATGAAGGAACGTCAAAGGTAAAAACTTCTCTATTACAATTGTTGAGTTCGACTGCTTGA MNMIKEGGSTTRPPVLDGINYAYWKARMTAFLKSIDNKTWKAVISKSDWTDAEDQASLGNSRALNAIYNDQNVFKLINTCTSAKEAWKILEVAYEGTSKVKTSLLQLLSSTA Homology
BLAST of IVF0003232 vs. ExPASy TrEMBL
Match: A0A5A7SP99 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold340G00320 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.4e-52 Identity = 111/129 (86.05%), Postives = 112/129 (86.82%), Query Frame = 0
BLAST of IVF0003232 vs. ExPASy TrEMBL
Match: Q84VI4 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32 Identity = 74/132 (56.06%), Postives = 94/132 (71.21%), Query Frame = 0
BLAST of IVF0003232 vs. ExPASy TrEMBL
Match: Q84VH8 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32 Identity = 74/132 (56.06%), Postives = 94/132 (71.21%), Query Frame = 0
BLAST of IVF0003232 vs. ExPASy TrEMBL
Match: V9H042 (Gag-protease polyprotein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.9e-32 Identity = 74/132 (56.06%), Postives = 93/132 (70.45%), Query Frame = 0
BLAST of IVF0003232 vs. ExPASy TrEMBL
Match: Q84VH6 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.9e-32 Identity = 74/132 (56.06%), Postives = 93/132 (70.45%), Query Frame = 0
BLAST of IVF0003232 vs. NCBI nr
Match: KAA0032368.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK31640.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 212 bits (540), Expect = 7.91e-69 Identity = 111/129 (86.05%), Postives = 112/129 (86.82%), Query Frame = 0
BLAST of IVF0003232 vs. NCBI nr
Match: NRJ45860.1 (hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]) HSP 1 Score: 147 bits (372), Expect = 8.38e-43 Identity = 74/132 (56.06%), Postives = 93/132 (70.45%), Query Frame = 0
BLAST of IVF0003232 vs. NCBI nr
Match: KAA0025734.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK06164.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 145 bits (365), Expect = 2.30e-41 Identity = 73/129 (56.59%), Postives = 94/129 (72.87%), Query Frame = 0
BLAST of IVF0003232 vs. NCBI nr
Match: KAA0039062.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 142 bits (358), Expect = 3.76e-41 Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of IVF0003232 vs. NCBI nr
Match: KAA0053604.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 143 bits (360), Expect = 2.15e-40 Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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