IVF0021709.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAATGGATGGTTAACGATGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATGAAGTCACTATTTTAGTAAATGATGCGGAGAAGGCCAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTCGAAATAGTGGAAGCCAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTAG ATGATGAATGGATGGTTAACGATGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATGAAGTCACTATTTTAGTAAATGATGCGGAGAAGGCCAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTCGAAATAGTGGAAGCCAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTAG ATGATGAATGGATGGTTAACGATGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATGAAGTCACTATTTTAGTAAATGATGCGGAGAAGGCCAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTCGAAATAGTGGAAGCCAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTAG MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN Homology
BLAST of IVF0021709.2 vs. ExPASy Swiss-Prot
Match: Q4VZG9 (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus OX=3659 GN=atpE PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 5.7e-26 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy Swiss-Prot
Match: P09468 (ATP synthase epsilon chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=atpE PE=1 SV=2) HSP 1 Score: 112.5 bits (280), Expect = 1.8e-24 Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy Swiss-Prot
Match: Q09MH2 (ATP synthase epsilon chain, chloroplastic OS=Citrus sinensis OX=2711 GN=atpE PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 9.0e-24 Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy Swiss-Prot
Match: Q49KZ2 (ATP synthase epsilon chain, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=atpE PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 9.0e-24 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy Swiss-Prot
Match: A0ZZ41 (ATP synthase epsilon chain, chloroplastic OS=Gossypium barbadense OX=3634 GN=atpE PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 9.0e-24 Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy TrEMBL
Match: A0A5D3DDV0 (ATP synthase CF1 epsilon subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00700 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy TrEMBL
Match: A0A218KG49 (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=atpE PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.1e-23 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy TrEMBL
Match: G3ETZ1 (ATP synthase epsilon chain, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=atpE PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.1e-23 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy TrEMBL
Match: A0A1X9Q1L0 (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus OX=3659 GN=atpE PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.1e-23 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. ExPASy TrEMBL
Match: A0A249RZA2 (ATP synthase epsilon chain, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=atpE PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.1e-23 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. NCBI nr
Match: KAA0040079.1 (ATP synthase CF1 epsilon subunit [Cucumis melo var. makuwa] >TYK21703.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. makuwa]) HSP 1 Score: 123 bits (309), Expect = 2.88e-35 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of IVF0021709.2 vs. NCBI nr
Match: YP_009752081.1 (CF1 subunit epsilon [Dendrosicyos socotranus] >YP_009753095.1 CF1 subunit epsilon [Corallocarpus boehmii] >QIT05491.1 CF1 subunit epsilon [Dendrosicyos socotranus] >QIT06167.1 CF1 subunit epsilon [Corallocarpus boehmii]) HSP 1 Score: 116 bits (290), Expect = 1.63e-31 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. NCBI nr
Match: YP_009752418.1 (CF1 subunit epsilon [Trichosanthes tricuspidata] >YP_009753626.1 CF1 subunit epsilon [Trichosanthes wallichiana] >YP_009753711.1 CF1 subunit epsilon [Trichosanthes nervifolia] >QIT04645.1 CF1 subunit epsilon [Trichosanthes wallichiana] >QIT04814.1 CF1 subunit epsilon [Trichosanthes tricuspidata] >QIT05322.1 CF1 subunit epsilon [Trichosanthes nervifolia]) HSP 1 Score: 116 bits (290), Expect = 1.63e-31 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. NCBI nr
Match: ASY96329.1 (ATP synthase CF1 epsilon subunit [Cucumis melo subsp. agrestis]) HSP 1 Score: 116 bits (290), Expect = 1.63e-31 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. NCBI nr
Match: YP_004841789.1 (ATP synthase CF1 epsilon subunit [Cucumis melo subsp. melo] >YP_009004050.1 ATP synthase CF1 epsilon subunit [Cucumis hystrix] >YP_009317392.1 ATP synthase CF1 epsilon subunit [Coccinia grandis] >YP_009325995.1 ATP synthase CF1 epsilon subunit [Citrullus lanatus] >YP_009348037.1 ATP synthase CF1 epsilon subunit [Citrullus mucosospermus] >YP_009420800.1 ATP synthase CF1 epsilon subunit [Citrullus colocynthis] >YP_009431563.1 ATP synthase CF1 epsilon subunit [Citrullus amarus] >YP_009431648.1 ATP synthase CF1 epsilon subunit [Citrullus rehmii] >YP_009456152.1 ATP synthase CF1 epsilon subunit [Lagenaria siceraria] >YP_009860079.1 ATP synthase CF1 epsilon subunit [Cucumis melo subsp. agrestis] >YP_247605.1 ATP synthase CF1 epsilon subunit [Cucumis sativus] >Q4VZG9.1 RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName: Full=ATP synthase F1 sector epsilon subunit; AltName: Full=F-ATPase epsilon subunit [Cucumis sativus] >ALF03307.1 ATP synthase CF1 epsilon subunit [Cucumis sativus var. hardwickii] >APW82467.1 ATP synthase CF1 epsilon subunit [Citrullus lanatus subsp. vulgaris] >ASY96590.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. conomon] >ASY96677.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. makuwa] >ASY96764.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. momordica] >ASY96851.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. dudaim] >ASY96938.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. cantalupo] >ASY97112.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. inodorus] >ASY97286.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. flexuosus] >AVE15337.1 AtpE [Cucumis sativus var. sativus] >QJF46389.1 ATP synthase CF1 epsilon subunit [Cucumis melo] >QNM38537.1 ATP synthase CF1 epsilon subunit [Lagenaria siceraria var. microcarpa] >QZL38599.1 CF1 subunit epsilon [Citrullus naudinianus] >QZL38687.1 CF1 subunit epsilon [Citrullus ecirrhosus]) HSP 1 Score: 116 bits (290), Expect = 1.63e-31 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of IVF0021709.2 vs. TAIR 10
Match: ATCG00470.1 (ATP synthase epsilon chain ) HSP 1 Score: 112.5 bits (280), Expect = 1.3e-25 Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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